AIH curated blacklist: matched 5 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 163
Pass (FILTER=PASS): 12 (7.4%)
Fail (FILTER=FAIL): 151 (92.6%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 5
All 5 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 39
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 17
confidence_below_min(low<high): 15
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 3
total_reads_below_min(7.0<8.0): 2
total_reads_below_min(4.0<8.0): 2
confidence_below_min(medium<high);aih_curated_blacklist: 2
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 2
Breakdown by confidence:
high: 12 pass, 4 fail (total: 16)
low: 0 pass, 75 fail (total: 75)
medium: 0 pass, 72 fail (total: 72)
Arriba filter: 163 rows -> 12 PASS; wrote 1173_DSO_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filtered.tsv and 1173_DSO_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: 1173_DSO_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filter_summary.txt