Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7a/eea927ce9804024e9c2a7549b0dd03/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_2_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/13c680180614f0381178af1d587fb6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7a/eea927ce9804024e9c2a7549b0dd03/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_2_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/13c680180614f0381178af1d587fb6/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d8/61e2c1e7b1ef168eb3b11119266917/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.X8JTuwlnVg/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.X8JTuwlnVg/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary
-sample contains 257771495 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.X8JTuwlnVg/ctat_genome_lib_build_dir  -J /tmp/nxf.X8JTuwlnVg/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction  -O /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.X8JTuwlnVg/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.X8JTuwlnVg/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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-building interval tree based on /tmp/nxf.X8JTuwlnVg/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2680000], rate=43318.97/min 
[2690000], rate=43317.23/min 
[2700000], rate=43315.51/min 
[2710000], rate=43302.26/min 
-building interval tree based on /tmp/nxf.X8JTuwlnVg/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=42857.14/min 
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[3480000], rate=40733.52/min 
[3490000], rate=40747.23/min -building interval tree based on /tmp/nxf.X8JTuwlnVg/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=85714.29/min 
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[30000], rate=66666.67/min 
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[450000], rate=86816.72/min 
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[650000], rate=88838.27/min 
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[680000], rate=89670.33/min 
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[700000], rate=89361.70/min 
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[800000], rate=46966.73/min 
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[1980000], rate=27329.19/min 
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[2000000], rate=27422.30/min 
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[3490000], rate=34975.78/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.X8JTuwlnVg/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
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 5052631.58 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.X8JTuwlnVg/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.X8JTuwlnVg/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -2001714.507823
EM: Round [1] log likelihood: -2001354.716658
EM: Round [2] log likelihood: -2001222.875072
EM: Round [3] log likelihood: -2001161.150670
EM: Round [4] log likelihood: -2001128.528688
EM: Round [5] log likelihood: -2001109.900696
EM: Round [6] log likelihood: -2001098.602233
EM: Round [7] log likelihood: -2001091.375426
EM: Round [8] log likelihood: -2001086.520494
EM: Round [9] log likelihood: -2001083.107224
EM: Round [10] log likelihood: -2001080.606126
EM: Round [11] log likelihood: -2001078.705082
EM: Round [12] log likelihood: -2001077.213958
EM: Round [13] log likelihood: -2001076.013116
EM: Round [14] log likelihood: -2001075.024772
EM: Round [15] log likelihood: -2001074.196664
EM: Round [16] log likelihood: -2001073.492541
EM: Round [17] log likelihood: -2001072.886497
EM: Round [18] log likelihood: -2001072.359506
EM: Round [19] log likelihood: -2001071.897260
EM: Round [20] log likelihood: -2001071.488769
EM: Round [21] log likelihood: -2001071.125434
EM: Round [22] log likelihood: -2001070.800422
EM: Round [23] log likelihood: -2001070.508224
EM: Round [24] log likelihood: -2001070.244341
EM: Round [25] log likelihood: -2001070.005065
EM: Round [26] log likelihood: -2001069.787303
EM: Round [27] log likelihood: -2001069.588457
EM: Round [28] log likelihood: -2001069.406323
EM: Round [29] log likelihood: -2001069.239024
EM: Round [30] log likelihood: -2001069.084948
EM: Round [31] log likelihood: -2001068.942701
EM: Round [32] log likelihood: -2001068.811076
EM: Round [33] log likelihood: -2001068.689019
EM: Round [34] log likelihood: -2001068.575607
EM: Round [35] log likelihood: -2001068.470029
EM: Round [36] log likelihood: -2001068.371569
EM: Round [37] log likelihood: -2001068.279592
EM: Round [38] log likelihood: -2001068.193537
EM: Round [39] log likelihood: -2001068.112900
EM: Round [40] log likelihood: -2001068.037235
EM: Round [41] log likelihood: -2001067.966139
EM: Round [42] log likelihood: -2001067.899251
EM: Round [43] log likelihood: -2001067.836247
EM: Round [44] log likelihood: -2001067.776835
EM: Round [45] log likelihood: -2001067.720748
EM: Round [46] log likelihood: -2001067.667746
EM: Round [47] log likelihood: -2001067.617612
EM: Round [48] log likelihood: -2001067.570147
EM: Round [49] log likelihood: -2001067.525168
EM: Round [50] log likelihood: -2001067.482512
EM: Round [51] log likelihood: -2001067.442025
EM: Round [52] log likelihood: -2001067.403570
EM: Round [53] log likelihood: -2001067.367018
EM: Round [54] log likelihood: -2001067.332252
EM: Round [55] log likelihood: -2001067.299164
EM: Round [56] log likelihood: -2001067.267652
EM: Round [57] log likelihood: -2001067.237626
EM: Round [58] log likelihood: -2001067.208999
EM: Round [59] log likelihood: -2001067.181691
EM: Round [60] log likelihood: -2001067.155629
EM: Round [61] log likelihood: -2001067.130744
EM: Round [62] log likelihood: -2001067.106973
EM: Round [63] log likelihood: -2001067.084255
EM: Round [64] log likelihood: -2001067.062534
EM: Round [65] log likelihood: -2001067.041759
EM: Round [66] log likelihood: -2001067.021882
EM: Round [67] log likelihood: -2001067.002855
EM: Round [68] log likelihood: -2001066.984637
EM: Round [69] log likelihood: -2001066.967187
EM: Round [70] log likelihood: -2001066.950468
EM: Round [71] log likelihood: -2001066.934443
EM: Round [72] log likelihood: -2001066.919080
EM: Round [73] log likelihood: -2001066.904347
EM: Round [74] log likelihood: -2001066.890214
EM: Round [75] log likelihood: -2001066.876653
EM: Round [76] log likelihood: -2001066.863637
EM: Round [77] log likelihood: -2001066.851141
EM: Round [78] log likelihood: -2001066.839143
EM: Round [79] log likelihood: -2001066.827618
EM: Round [80] log likelihood: -2001066.816546
EM: Round [81] log likelihood: -2001066.805907
EM: Round [82] log likelihood: -2001066.795681
EM: Round [83] log likelihood: -2001066.785851
EM: Round [84] log likelihood: -2001066.776399
EM: Round [85] log likelihood: -2001066.767309
EM: Round [86] log likelihood: -2001066.758564
EM: Round [87] log likelihood: -2001066.750152
EM: Round [88] log likelihood: -2001066.742056
EM: Round [89] log likelihood: -2001066.734264
EM: Round [90] log likelihood: -2001066.726763
EM: Round [91] log likelihood: -2001066.719542
EM: Round [92] log likelihood: -2001066.712587
EM: Round [93] log likelihood: -2001066.705889
EM: Round [94] log likelihood: -2001066.699437
EM: Round [95] log likelihood: -2001066.693220
EM: Round [96] log likelihood: -2001066.687230
EM: Round [97] log likelihood: -2001066.681456
EM: Round [98] log likelihood: -2001066.675891
EM: Round [99] log likelihood: -2001066.670525
EM: Round [100] log likelihood: -2001066.665351
EM: Round [101] log likelihood: -2001066.660362
EM: Round [102] log likelihood: -2001066.655550
EM: Round [103] log likelihood: -2001066.650907
EM: Round [104] log likelihood: -2001066.646428
EM: Round [105] log likelihood: -2001066.642106
EM: Round [106] log likelihood: -2001066.637935
EM: Round [107] log likelihood: -2001066.633909
EM: Round [108] log likelihood: -2001066.630022
EM: Round [109] log likelihood: -2001066.626269
EM: Round [110] log likelihood: -2001066.622645
EM: Round [111] log likelihood: -2001066.619146
EM: Round [112] log likelihood: -2001066.615765
EM: Round [113] log likelihood: -2001066.612500
EM: Round [114] log likelihood: -2001066.609345
EM: Round [115] log likelihood: -2001066.606296
EM: Round [116] log likelihood: -2001066.603350
EM: Round [117] log likelihood: -2001066.600503
EM: Round [118] log likelihood: -2001066.597750
EM: Round [119] log likelihood: -2001066.595089
EM: Round [120] log likelihood: -2001066.592516
EM: Round [121] log likelihood: -2001066.590028
EM: Round [122] log likelihood: -2001066.587621
EM: Round [123] log likelihood: -2001066.585294
EM: Round [124] log likelihood: -2001066.583042
EM: Round [125] log likelihood: -2001066.580863
EM: Round [126] log likelihood: -2001066.578756
EM: Round [127] log likelihood: -2001066.576716
EM: Round [128] log likelihood: -2001066.574741
EM: Round [129] log likelihood: -2001066.572830
EM: Round [130] log likelihood: -2001066.570981
EM: Round [131] log likelihood: -2001066.569190
EM: Round [132] log likelihood: -2001066.567455
EM: Round [133] log likelihood: -2001066.565776
EM: Round [134] log likelihood: -2001066.564150
EM: Round [135] log likelihood: -2001066.562574
EM: Round [136] log likelihood: -2001066.561048
EM: Round [137] log likelihood: -2001066.559570
EM: Round [138] log likelihood: -2001066.558137
EM: Round [139] log likelihood: -2001066.556749
EM: Round [140] log likelihood: -2001066.555404
EM: Round [141] log likelihood: -2001066.554100
EM: Round [142] log likelihood: -2001066.552836
EM: Round [143] log likelihood: -2001066.551611
EM: Round [144] log likelihood: -2001066.550423
EM: Round [145] log likelihood: -2001066.549271
EM: Round [146] log likelihood: -2001066.548155
EM: Round [147] log likelihood: -2001066.547072
EM: Round [148] log likelihood: -2001066.546021
EM: Round [149] log likelihood: -2001066.545002
EM: Round [150] log likelihood: -2001066.544014
EM: Round [151] log likelihood: -2001066.543055
EM: Round [152] log likelihood: -2001066.542124
EM: Round [153] log likelihood: -2001066.541221
EM: Round [154] log likelihood: -2001066.540345
EM: Round [155] log likelihood: -2001066.539495
EM: Round [156] log likelihood: -2001066.538670
EM: Round [157] log likelihood: -2001066.537868
EM: Round [158] log likelihood: -2001066.537091
EM: Round [159] log likelihood: -2001066.536336
EM: Round [160] log likelihood: -2001066.535602
EM: Round [161] log likelihood: -2001066.534890
EM: Round [162] log likelihood: -2001066.534199
EM: Round [163] log likelihood: -2001066.533528
EM: Round [164] log likelihood: -2001066.532876
EM: Round [165] log likelihood: -2001066.532242
EM: Round [166] log likelihood: -2001066.531627
EM: Round [167] log likelihood: -2001066.531029
EM: Round [168] log likelihood: -2001066.530448
EM: Round [169] log likelihood: -2001066.529884
EM: Round [170] log likelihood: -2001066.529335
EM: Round [171] log likelihood: -2001066.528803
EM: Round [172] log likelihood: -2001066.528285
EM: Round [173] log likelihood: -2001066.527781
EM: Round [174] log likelihood: -2001066.527292
EM: Round [175] log likelihood: -2001066.526816
EM: Round [176] log likelihood: -2001066.526354
EM: Round [177] log likelihood: -2001066.525904
EM: Round [178] log likelihood: -2001066.525467
EM: Round [179] log likelihood: -2001066.525042
EM: Round [180] log likelihood: -2001066.524629
EM: Round [181] log likelihood: -2001066.524227
EM: Round [182] log likelihood: -2001066.523837
EM: Round [183] log likelihood: -2001066.523456
EM: Round [184] log likelihood: -2001066.523087
EM: Round [185] log likelihood: -2001066.522727
EM: Round [186] log likelihood: -2001066.522377
EM: Round [187] log likelihood: -2001066.522037
EM: Round [188] log likelihood: -2001066.521706
EM: Round [189] log likelihood: -2001066.521384
EM: Round [190] log likelihood: -2001066.521070
EM: Round [191] log likelihood: -2001066.520765
EM: Round [192] log likelihood: -2001066.520468
EM: Round [193] log likelihood: -2001066.520179
EM: Round [194] log likelihood: -2001066.519898
EM: Round [195] log likelihood: -2001066.519625
EM: Round [196] log likelihood: -2001066.519358
EM: Round [197] log likelihood: -2001066.519099
EM: Round [198] log likelihood: -2001066.518847
EM: Round [199] log likelihood: -2001066.518601
EM: Round [200] log likelihood: -2001066.518362
EM: Round [201] log likelihood: -2001066.518129
EM: Round [202] log likelihood: -2001066.517902
EM: Round [203] log likelihood: -2001066.517682
EM: Round [204] log likelihood: -2001066.517467
EM: Round [205] log likelihood: -2001066.517258
EM: Round [206] log likelihood: -2001066.517054
EM: Round [207] log likelihood: -2001066.516855
EM: Round [208] log likelihood: -2001066.516662
EM: Round [209] log likelihood: -2001066.516474
EM: Round [210] log likelihood: -2001066.516290
EM: Round [211] log likelihood: -2001066.516112
EM: Round [212] log likelihood: -2001066.515938
EM: Round [213] log likelihood: -2001066.515768
EM: Round [214] log likelihood: -2001066.515603
EM: Round [215] log likelihood: -2001066.515442
EM: Round [216] log likelihood: -2001066.515286
EM: Round [217] log likelihood: -2001066.515133
EM: Round [218] log likelihood: -2001066.514984
EM: Round [219] log likelihood: -2001066.514839
EM: Round [220] log likelihood: -2001066.514698
EM: Round [221] log likelihood: -2001066.514560
EM: Round [222] log likelihood: -2001066.514426
EM: Round [223] log likelihood: -2001066.514296
EM: Round [224] log likelihood: -2001066.514168
EM: Round [225] log likelihood: -2001066.514044
EM: Round [226] log likelihood: -2001066.513923
EM: Round [227] log likelihood: -2001066.513805
EM: Round [228] log likelihood: -2001066.513690
EM: Round [229] log likelihood: -2001066.513578
EM: Round [230] log likelihood: -2001066.513469
EM: Round [231] log likelihood: -2001066.513363
EM: Round [232] log likelihood: -2001066.513259
EM: Round [233] log likelihood: -2001066.513158
EM: Round [234] log likelihood: -2001066.513059
EM: Stopping iterations at round 234 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -2000235.854194
EM: Round [1] log likelihood: -1999922.945742
EM: Round [2] log likelihood: -1999809.727218
EM: Round [3] log likelihood: -1999757.366790
EM: Round [4] log likelihood: -1999730.041022
EM: Round [5] log likelihood: -1999714.673323
EM: Round [6] log likelihood: -1999705.526581
EM: Round [7] log likelihood: -1999699.807166
EM: Round [8] log likelihood: -1999696.063079
EM: Round [9] log likelihood: -1999693.503619
EM: Round [10] log likelihood: -1999691.681717
EM: Round [11] log likelihood: -1999690.336142
EM: Round [12] log likelihood: -1999689.309480
EM: Round [13] log likelihood: -1999688.503951
EM: Round [14] log likelihood: -1999687.856902
EM: Round [15] log likelihood: -1999687.326898
EM: Round [16] log likelihood: -1999686.885666
EM: Round [17] log likelihood: -1999686.513328
EM: Round [18] log likelihood: -1999686.195520
EM: Round [19] log likelihood: -1999685.921608
EM: Round [20] log likelihood: -1999685.683544
EM: Round [21] log likelihood: -1999685.475124
EM: Round [22] log likelihood: -1999685.291482
EM: Round [23] log likelihood: -1999685.128751
EM: Round [24] log likelihood: -1999684.983810
EM: Round [25] log likelihood: -1999684.854119
EM: Round [26] log likelihood: -1999684.737585
EM: Round [27] log likelihood: -1999684.632468
EM: Round [28] log likelihood: -1999684.537312
EM: Round [29] log likelihood: -1999684.450887
EM: Round [30] log likelihood: -1999684.372149
EM: Round [31] log likelihood: -1999684.300204
EM: Round [32] log likelihood: -1999684.234287
EM: Round [33] log likelihood: -1999684.173734
EM: Round [34] log likelihood: -1999684.117972
EM: Round [35] log likelihood: -1999684.066502
EM: Round [36] log likelihood: -1999684.018885
EM: Round [37] log likelihood: -1999683.974740
EM: Round [38] log likelihood: -1999683.933729
EM: Round [39] log likelihood: -1999683.895554
EM: Round [40] log likelihood: -1999683.859954
EM: Round [41] log likelihood: -1999683.826695
EM: Round [42] log likelihood: -1999683.795568
EM: Round [43] log likelihood: -1999683.766390
EM: Round [44] log likelihood: -1999683.738995
EM: Round [45] log likelihood: -1999683.713234
EM: Round [46] log likelihood: -1999683.688976
EM: Round [47] log likelihood: -1999683.666100
EM: Round [48] log likelihood: -1999683.644499
EM: Round [49] log likelihood: -1999683.624077
EM: Round [50] log likelihood: -1999683.604745
EM: Round [51] log likelihood: -1999683.586424
EM: Round [52] log likelihood: -1999683.569041
EM: Round [53] log likelihood: -1999683.552531
EM: Round [54] log likelihood: -1999683.536834
EM: Round [55] log likelihood: -1999683.521896
EM: Round [56] log likelihood: -1999683.507666
EM: Round [57] log likelihood: -1999683.494100
EM: Round [58] log likelihood: -1999683.481155
EM: Round [59] log likelihood: -1999683.468792
EM: Round [60] log likelihood: -1999683.456977
EM: Round [61] log likelihood: -1999683.445678
EM: Round [62] log likelihood: -1999683.434862
EM: Round [63] log likelihood: -1999683.424505
EM: Round [64] log likelihood: -1999683.414578
EM: Round [65] log likelihood: -1999683.405059
EM: Round [66] log likelihood: -1999683.395926
EM: Round [67] log likelihood: -1999683.387158
EM: Round [68] log likelihood: -1999683.378736
EM: Round [69] log likelihood: -1999683.370643
EM: Round [70] log likelihood: -1999683.362860
EM: Round [71] log likelihood: -1999683.355374
EM: Round [72] log likelihood: -1999683.348170
EM: Round [73] log likelihood: -1999683.341234
EM: Round [74] log likelihood: -1999683.334553
EM: Round [75] log likelihood: -1999683.328116
EM: Round [76] log likelihood: -1999683.321911
EM: Round [77] log likelihood: -1999683.315928
EM: Round [78] log likelihood: -1999683.310156
EM: Round [79] log likelihood: -1999683.304587
EM: Round [80] log likelihood: -1999683.299212
EM: Round [81] log likelihood: -1999683.294021
EM: Round [82] log likelihood: -1999683.289009
EM: Round [83] log likelihood: -1999683.284166
EM: Round [84] log likelihood: -1999683.279486
EM: Round [85] log likelihood: -1999683.274963
EM: Round [86] log likelihood: -1999683.270589
EM: Round [87] log likelihood: -1999683.266360
EM: Round [88] log likelihood: -1999683.262268
EM: Round [89] log likelihood: -1999683.258310
EM: Round [90] log likelihood: -1999683.254479
EM: Round [91] log likelihood: -1999683.250770
EM: Round [92] log likelihood: -1999683.247180
EM: Round [93] log likelihood: -1999683.243704
EM: Round [94] log likelihood: -1999683.240337
EM: Round [95] log likelihood: -1999683.237075
EM: Round [96] log likelihood: -1999683.233914
EM: Round [97] log likelihood: -1999683.230852
EM: Round [98] log likelihood: -1999683.227883
EM: Round [99] log likelihood: -1999683.225005
EM: Round [100] log likelihood: -1999683.222215
EM: Round [101] log likelihood: -1999683.219510
EM: Round [102] log likelihood: -1999683.216886
EM: Round [103] log likelihood: -1999683.214341
EM: Round [104] log likelihood: -1999683.211872
EM: Round [105] log likelihood: -1999683.209476
EM: Round [106] log likelihood: -1999683.207151
EM: Round [107] log likelihood: -1999683.204895
EM: Round [108] log likelihood: -1999683.202705
EM: Round [109] log likelihood: -1999683.200579
EM: Round [110] log likelihood: -1999683.198515
EM: Round [111] log likelihood: -1999683.196510
EM: Round [112] log likelihood: -1999683.194564
EM: Round [113] log likelihood: -1999683.192673
EM: Round [114] log likelihood: -1999683.190837
EM: Round [115] log likelihood: -1999683.189053
EM: Round [116] log likelihood: -1999683.187320
EM: Round [117] log likelihood: -1999683.185637
EM: Round [118] log likelihood: -1999683.184000
EM: Round [119] log likelihood: -1999683.182410
EM: Round [120] log likelihood: -1999683.180865
EM: Round [121] log likelihood: -1999683.179362
EM: Round [122] log likelihood: -1999683.177902
EM: Round [123] log likelihood: -1999683.176482
EM: Round [124] log likelihood: -1999683.175102
EM: Round [125] log likelihood: -1999683.173760
EM: Round [126] log likelihood: -1999683.172455
EM: Round [127] log likelihood: -1999683.171185
EM: Round [128] log likelihood: -1999683.169951
EM: Round [129] log likelihood: -1999683.168750
EM: Round [130] log likelihood: -1999683.167582
EM: Round [131] log likelihood: -1999683.166446
EM: Round [132] log likelihood: -1999683.165340
EM: Round [133] log likelihood: -1999683.164265
EM: Round [134] log likelihood: -1999683.163219
EM: Round [135] log likelihood: -1999683.162200
EM: Round [136] log likelihood: -1999683.161209
EM: Round [137] log likelihood: -1999683.160245
EM: Round [138] log likelihood: -1999683.159306
EM: Round [139] log likelihood: -1999683.158393
EM: Round [140] log likelihood: -1999683.157504
EM: Round [141] log likelihood: -1999683.156638
EM: Round [142] log likelihood: -1999683.155795
EM: Round [143] log likelihood: -1999683.154975
EM: Round [144] log likelihood: -1999683.154176
EM: Round [145] log likelihood: -1999683.153399
EM: Round [146] log likelihood: -1999683.152641
EM: Round [147] log likelihood: -1999683.151904
EM: Round [148] log likelihood: -1999683.151186
EM: Round [149] log likelihood: -1999683.150487
EM: Round [150] log likelihood: -1999683.149806
EM: Round [151] log likelihood: -1999683.149142
EM: Round [152] log likelihood: -1999683.148496
EM: Round [153] log likelihood: -1999683.147867
EM: Round [154] log likelihood: -1999683.147254
EM: Round [155] log likelihood: -1999683.146657
EM: Round [156] log likelihood: -1999683.146075
EM: Round [157] log likelihood: -1999683.145509
EM: Round [158] log likelihood: -1999683.144957
EM: Round [159] log likelihood: -1999683.144419
EM: Round [160] log likelihood: -1999683.143895
EM: Round [161] log likelihood: -1999683.143384
EM: Round [162] log likelihood: -1999683.142887
EM: Round [163] log likelihood: -1999683.142402
EM: Round [164] log likelihood: -1999683.141929
EM: Round [165] log likelihood: -1999683.141469
EM: Round [166] log likelihood: -1999683.141020
EM: Round [167] log likelihood: -1999683.140583
EM: Round [168] log likelihood: -1999683.140157
EM: Round [169] log likelihood: -1999683.139741
EM: Round [170] log likelihood: -1999683.139336
EM: Round [171] log likelihood: -1999683.138942
EM: Round [172] log likelihood: -1999683.138557
EM: Round [173] log likelihood: -1999683.138182
EM: Round [174] log likelihood: -1999683.137817
EM: Round [175] log likelihood: -1999683.137460
EM: Round [176] log likelihood: -1999683.137113
EM: Round [177] log likelihood: -1999683.136774
EM: Round [178] log likelihood: -1999683.136444
EM: Round [179] log likelihood: -1999683.136122
EM: Round [180] log likelihood: -1999683.135809
EM: Round [181] log likelihood: -1999683.135503
EM: Round [182] log likelihood: -1999683.135204
EM: Round [183] log likelihood: -1999683.134913
EM: Round [184] log likelihood: -1999683.134630
EM: Round [185] log likelihood: -1999683.134353
EM: Round [186] log likelihood: -1999683.134084
EM: Round [187] log likelihood: -1999683.133821
EM: Round [188] log likelihood: -1999683.133564
EM: Round [189] log likelihood: -1999683.133314
EM: Round [190] log likelihood: -1999683.133070
EM: Round [191] log likelihood: -1999683.132832
EM: Round [192] log likelihood: -1999683.132600
EM: Round [193] log likelihood: -1999683.132374
EM: Round [194] log likelihood: -1999683.132153
EM: Round [195] log likelihood: -1999683.131938
EM: Round [196] log likelihood: -1999683.131728
EM: Round [197] log likelihood: -1999683.131524
EM: Round [198] log likelihood: -1999683.131324
EM: Round [199] log likelihood: -1999683.131129
EM: Round [200] log likelihood: -1999683.130939
EM: Round [201] log likelihood: -1999683.130754
EM: Round [202] log likelihood: -1999683.130573
EM: Round [203] log likelihood: -1999683.130397
EM: Round [204] log likelihood: -1999683.130225
EM: Round [205] log likelihood: -1999683.130057
EM: Round [206] log likelihood: -1999683.129893
EM: Round [207] log likelihood: -1999683.129733
EM: Round [208] log likelihood: -1999683.129578
EM: Round [209] log likelihood: -1999683.129426
EM: Round [210] log likelihood: -1999683.129277
EM: Round [211] log likelihood: -1999683.129133
EM: Round [212] log likelihood: -1999683.128991
EM: Round [213] log likelihood: -1999683.128854
EM: Round [214] log likelihood: -1999683.128719
EM: Round [215] log likelihood: -1999683.128588
EM: Round [216] log likelihood: -1999683.128460
EM: Round [217] log likelihood: -1999683.128335
EM: Round [218] log likelihood: -1999683.128214
EM: Round [219] log likelihood: -1999683.128095
EM: Round [220] log likelihood: -1999683.127979
EM: Round [221] log likelihood: -1999683.127866
EM: Round [222] log likelihood: -1999683.127755
EM: Round [223] log likelihood: -1999683.127648
EM: Round [224] log likelihood: -1999683.127542
EM: Round [225] log likelihood: -1999683.127440
EM: Round [226] log likelihood: -1999683.127340
EM: Round [227] log likelihood: -1999683.127242
EM: Stopping iterations at round 227 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.X8JTuwlnVg/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.X8JTuwlnVg/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.X8JTuwlnVg/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 257771495 > /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.X8JTuwlnVg/ctat_genome_lib_build_dir > /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.X8JTuwlnVg/ctat_genome_lib_build_dir --annotate /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.X8JTuwlnVg/ctat_genome_lib_build_dir
-done, see /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.X8JTuwlnVg/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 925, filtered: 5977)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.X8JTuwlnVg/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.X8JTuwlnVg/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000286472.1]
WARNING, no entry stored in dbm for [ENSG00000271699.5]
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WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000229807.12]
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WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
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WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
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WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000287920.1]
WARNING, no entry stored in dbm for [ENSG00000258232.2]
WARNING, no entry stored in dbm for [ENSG00000285051.2]
WARNING, no entry stored in dbm for [ENSG00000286856.1]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
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WARNING, no entry stored in dbm for [ENSG00000278834.1]
WARNING, no entry stored in dbm for [ENSG00000241350.1]
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WARNING, no entry stored in dbm for [ENSG00000214807.2]
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WARNING, no entry stored in dbm for [ENSG00000257139.1]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000275741.1]
WARNING, no entry stored in dbm for [ENSG00000286257.2]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
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WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000280117.1]
WARNING, no entry stored in dbm for [ENSG00000250159.7]
WARNING, no entry stored in dbm for [ENSG00000254035.1]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000131484.4]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000237666.2]
WARNING, no entry stored in dbm for [ENSG00000259299.1]
WARNING, no entry stored in dbm for [ENSG00000248898.3]
WARNING, no entry stored in dbm for [ENSG00000262732.1]
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WARNING, no entry stored in dbm for [ENSG00000235552.4]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
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WARNING, no entry stored in dbm for [ENSG00000268163.1]
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WARNING, no entry stored in dbm for [ENSG00000268163.1]
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WARNING, no entry stored in dbm for [ENSG00000250332.1]
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WARNING, no entry stored in dbm for [ENSG00000237232.9]
WARNING, no entry stored in dbm for [ENSG00000240622.1]
WARNING, no entry stored in dbm for [ENSG00000255559.1]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000251003.9]
WARNING, no entry stored in dbm for [ENSG00000246982.7]
WARNING, no entry stored in dbm for [ENSG00000272758.6]
WARNING, no entry stored in dbm for [ENSG00000255449.1]
WARNING, no entry stored in dbm for [ENSG00000235724.10]
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WARNING, no entry stored in dbm for [ENSG00000259429.5]
WARNING, no entry stored in dbm for [ENSG00000248049.7]
WARNING, no entry stored in dbm for [ENSG00000223756.7]
WARNING, no entry stored in dbm for [ENSG00000242858.1]
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WARNING, no entry stored in dbm for [ENSG00000286876.1]
WARNING, no entry stored in dbm for [ENSG00000244627.5]
WARNING, no entry stored in dbm for [ENSG00000279021.1]
WARNING, no entry stored in dbm for [ENSG00000234336.7]
WARNING, no entry stored in dbm for [ENSG00000286116.1]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
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WARNING, no entry stored in dbm for [ENSG00000267065.2]
WARNING, no entry stored in dbm for [ENSG00000264538.6]
WARNING, no entry stored in dbm for [ENSG00000249628.3]
WARNING, no entry stored in dbm for [ENSG00000241316.8]
WARNING, no entry stored in dbm for [ENSG00000270344.3]
WARNING, no entry stored in dbm for [ENSG00000246985.8]
WARNING, no entry stored in dbm for [ENSG00000271699.5]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000228649.9]
WARNING, no entry stored in dbm for [ENSG00000242753.2]
WARNING, no entry stored in dbm for [ENSG00000261351.2]
WARNING, no entry stored in dbm for [ENSG00000185031.6]
WARNING, no entry stored in dbm for [ENSG00000257225.1]
WARNING, no entry stored in dbm for [ENSG00000251003.9]
WARNING, no entry stored in dbm for [ENSG00000234771.3]
WARNING, no entry stored in dbm for [ENSG00000234771.3]
WARNING, no entry stored in dbm for [ENSG00000230176.3]
WARNING, no entry stored in dbm for [ENSG00000277077.1]
WARNING, no entry stored in dbm for [ENSG00000230126.1]
WARNING, no entry stored in dbm for [ENSG00000226200.7]
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WARNING, no entry stored in dbm for [ENSG00000185986.12]
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WARNING, no entry stored in dbm for [ENSG00000254911.3]
WARNING, no entry stored in dbm for [ENSG00000228956.8]
WARNING, no entry stored in dbm for [ENSG00000260372.7]
WARNING, no entry stored in dbm for [ENSG00000230629.2]
WARNING, no entry stored in dbm for [ENSG00000241641.1]
WARNING, no entry stored in dbm for [ENSG00000230629.2]
WARNING, no entry stored in dbm for [ENSG00000242608.1]
WARNING, no entry stored in dbm for [ENSG00000223396.4]
WARNING, no entry stored in dbm for [ENSG00000251474.6]
WARNING, no entry stored in dbm for [ENSG00000242993.1]
WARNING, no entry stored in dbm for [ENSG00000215002.2]
WARNING, no entry stored in dbm for [ENSG00000269244.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000139239.7]
WARNING, no entry stored in dbm for [ENSG00000225661.7]
WARNING, no entry stored in dbm for [ENSG00000223652.2]
WARNING, no entry stored in dbm for [ENSG00000222685.1]
WARNING, no entry stored in dbm for [ENSG00000235012.1]
WARNING, no entry stored in dbm for [ENSG00000278834.1]
WARNING, no entry stored in dbm for [ENSG00000232160.7]
WARNING, no entry stored in dbm for [ENSG00000130600.19]
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WARNING, no entry stored in dbm for [ENSG00000254037.2]
WARNING, no entry stored in dbm for [ENSG00000259905.7]
WARNING, no entry stored in dbm for [ENSG00000259905.7]
WARNING, no entry stored in dbm for [ENSG00000259905.7]
WARNING, no entry stored in dbm for [ENSG00000257225.1]
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WARNING, no entry stored in dbm for [ENSG00000237609.1]
WARNING, no entry stored in dbm for [ENSG00000162997.15]
WARNING, no entry stored in dbm for [ENSG00000279818.1]
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WARNING, no entry stored in dbm for [ENSG00000285517.1]
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WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000245904.4]
WARNING, no entry stored in dbm for [ENSG00000249740.3]
WARNING, no entry stored in dbm for [ENSG00000183444.10]
WARNING, no entry stored in dbm for [ENSG00000168992.4]
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WARNING, no entry stored in dbm for [ENSG00000270432.1]
WARNING, no entry stored in dbm for [ENSG00000165121.11]
WARNING, no entry stored in dbm for [ENSG00000228328.2]
WARNING, no entry stored in dbm for [ENSG00000106133.18]
WARNING, no entry stored in dbm for [ENSG00000233597.3]
WARNING, no entry stored in dbm for [ENSG00000274487.2]
WARNING, no entry stored in dbm for [ENSG00000234684.7]
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WARNING, no entry stored in dbm for [ENSG00000269737.2]
WARNING, no entry stored in dbm for [ENSG00000198496.12]
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WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000214719.13]
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WARNING, no entry stored in dbm for [ENSG00000232024.2]
WARNING, no entry stored in dbm for [ENSG00000236704.1]
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WARNING, no entry stored in dbm for [ENSG00000216031.1]
WARNING, no entry stored in dbm for [ENSG00000233325.3]
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WARNING, no entry stored in dbm for [ENSG00000248692.5]
WARNING, no entry stored in dbm for [ENSG00000225783.8]
WARNING, no entry stored in dbm for [ENSG00000246731.3]
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WARNING, no entry stored in dbm for [ENSG00000243970.3]
WARNING, no entry stored in dbm for [ENSG00000253051.1]
WARNING, no entry stored in dbm for [ENSG00000277631.5]
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WARNING, no entry stored in dbm for [ENSG00000226549.3]
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WARNING, no entry stored in dbm for [ENSG00000278144.1]
WARNING, no entry stored in dbm for [ENSG00000280118.3]
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WARNING, no entry stored in dbm for [ENSG00000239883.8]
WARNING, no entry stored in dbm for [ENSG00000257139.1]
WARNING, no entry stored in dbm for [ENSG00000241288.8]
WARNING, no entry stored in dbm for [ENSG00000228350.1]
WARNING, no entry stored in dbm for [ENSG00000238042.5]
WARNING, no entry stored in dbm for [ENSG00000261156.6]
WARNING, no entry stored in dbm for [ENSG00000267220.1]
WARNING, no entry stored in dbm for [ENSG00000226383.7]
WARNING, no entry stored in dbm for [ENSG00000258779.8]
WARNING, no entry stored in dbm for [ENSG00000205334.2]
WARNING, no entry stored in dbm for [ENSG00000231605.6]
WARNING, no entry stored in dbm for [ENSG00000226891.9]
WARNING, no entry stored in dbm for [ENSG00000235437.8]
WARNING, no entry stored in dbm for [ENSG00000281404.2]
WARNING, no entry stored in dbm for [ENSG00000235314.1]
WARNING, no entry stored in dbm for [ENSG00000257653.1]
WARNING, no entry stored in dbm for [ENSG00000237945.7]
WARNING, no entry stored in dbm for [ENSG00000280798.1]
WARNING, no entry stored in dbm for [ENSG00000225872.4]
WARNING, no entry stored in dbm for [ENSG00000213598.4]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000213740.2]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000259020.3]
WARNING, no entry stored in dbm for [ENSG00000247728.2]
WARNING, no entry stored in dbm for [ENSG00000242559.3]
WARNING, no entry stored in dbm for [ENSG00000240652.1]
WARNING, no entry stored in dbm for [ENSG00000259635.1]
WARNING, no entry stored in dbm for [ENSG00000259269.2]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000253774.1]
WARNING, no entry stored in dbm for [ENSG00000204622.11]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000248785.1]
WARNING, no entry stored in dbm for [ENSG00000233299.1]
WARNING, no entry stored in dbm for [ENSG00000238105.7]
WARNING, no entry stored in dbm for [ENSG00000273576.1]
WARNING, no entry stored in dbm for [ENSG00000130600.19]
WARNING, no entry stored in dbm for [ENSG00000253816.3]
WARNING, no entry stored in dbm for [ENSG00000231749.3]
WARNING, no entry stored in dbm for [ENSG00000226002.1]
WARNING, no entry stored in dbm for [ENSG00000233910.1]
WARNING, no entry stored in dbm for [ENSG00000231271.1]
WARNING, no entry stored in dbm for [ENSG00000236526.1]
WARNING, no entry stored in dbm for [ENSG00000271333.1]
WARNING, no entry stored in dbm for [ENSG00000185182.14]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000287429.1]
WARNING, no entry stored in dbm for [ENSG00000242814.2]
WARNING, no entry stored in dbm for [ENSG00000283371.1]
WARNING, no entry stored in dbm for [ENSG00000213468.7]
WARNING, no entry stored in dbm for [ENSG00000173295.8]
WARNING, no entry stored in dbm for [ENSG00000227888.4]
WARNING, no entry stored in dbm for [ENSG00000244383.2]
WARNING, no entry stored in dbm for [ENSG00000287252.1]
WARNING, no entry stored in dbm for [ENSG00000236472.1]
WARNING, no entry stored in dbm for [ENSG00000225491.1]
WARNING, no entry stored in dbm for [ENSG00000284380.1]
WARNING, no entry stored in dbm for [ENSG00000213178.3]
WARNING, no entry stored in dbm for [ENSG00000231794.5]
WARNING, no entry stored in dbm for [ENSG00000229618.3]
WARNING, no entry stored in dbm for [ENSG00000263753.8]
WARNING, no entry stored in dbm for [ENSG00000253180.1]
WARNING, no entry stored in dbm for [ENSG00000223612.3]
WARNING, no entry stored in dbm for [ENSG00000188459.4]
WARNING, no entry stored in dbm for [ENSG00000274664.1]
WARNING, no entry stored in dbm for [ENSG00000233937.7]
WARNING, no entry stored in dbm for [ENSG00000248103.1]
WARNING, no entry stored in dbm for [ENSG00000282728.1]
WARNING, no entry stored in dbm for [ENSG00000182574.8]
WARNING, no entry stored in dbm for [ENSG00000080947.15]
WARNING, no entry stored in dbm for [ENSG00000236526.1]
WARNING, no entry stored in dbm for [ENSG00000237773.7]
WARNING, no entry stored in dbm for [ENSG00000235721.1]
WARNING, no entry stored in dbm for [ENSG00000285633.1]
WARNING, no entry stored in dbm for [ENSG00000236391.3]
WARNING, no entry stored in dbm for [ENSG00000247950.7]
WARNING, no entry stored in dbm for [ENSG00000183535.9]
WARNING, no entry stored in dbm for [ENSG00000237017.1]
WARNING, no entry stored in dbm for [ENSG00000283559.2]
WARNING, no entry stored in dbm for [ENSG00000244560.7]
WARNING, no entry stored in dbm for [ENSG00000260896.6]
WARNING, no entry stored in dbm for [ENSG00000250568.1]
WARNING, no entry stored in dbm for [ENSG00000236088.10]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000213753.11]
WARNING, no entry stored in dbm for [ENSG00000262081.2]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000236526.1]
WARNING, no entry stored in dbm for [ENSG00000242600.8]
WARNING, no entry stored in dbm for [ENSG00000279034.1]
WARNING, no entry stored in dbm for [ENSG00000226259.10]
WARNING, no entry stored in dbm for [ENSG00000257551.1]
WARNING, no entry stored in dbm for [ENSG00000197568.14]
WARNING, no entry stored in dbm for [ENSG00000233766.7]
WARNING, no entry stored in dbm for [ENSG00000288596.2]
WARNING, no entry stored in dbm for [ENSG00000232439.1]
WARNING, no entry stored in dbm for [ENSG00000205885.7]
WARNING, no entry stored in dbm for [ENSG00000158483.17]
WARNING, no entry stored in dbm for [ENSG00000215146.5]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000242779.7]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000130600.19]
WARNING, no entry stored in dbm for [ENSG00000245573.9]
WARNING, no entry stored in dbm for [ENSG00000259404.5]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000255355.1]
WARNING, no entry stored in dbm for [ENSG00000197595.4]
WARNING, no entry stored in dbm for [ENSG00000235919.4]
WARNING, no entry stored in dbm for [ENSG00000223602.2]
WARNING, no entry stored in dbm for [ENSG00000227288.3]
WARNING, no entry stored in dbm for [ENSG00000253438.4]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000275146.1]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000254682.1]
WARNING, no entry stored in dbm for [ENSG00000279742.1]
WARNING, no entry stored in dbm for [ENSG00000284233.1]
WARNING, no entry stored in dbm for [ENSG00000269982.1]
WARNING, no entry stored in dbm for [ENSG00000226943.3]
WARNING, no entry stored in dbm for [ENSG00000231304.2]
WARNING, no entry stored in dbm for [ENSG00000226943.3]
WARNING, no entry stored in dbm for [ENSG00000256101.5]
WARNING, no entry stored in dbm for [ENSG00000279561.2]
WARNING, no entry stored in dbm for [ENSG00000272540.1]
WARNING, no entry stored in dbm for [ENSG00000236723.2]
WARNING, no entry stored in dbm for [ENSG00000224114.1]
WARNING, no entry stored in dbm for [ENSG00000240669.1]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000286060.1]
WARNING, no entry stored in dbm for [ENSG00000272463.1]
WARNING, no entry stored in dbm for [ENSG00000248503.2]
WARNING, no entry stored in dbm for [ENSG00000231039.2]
WARNING, no entry stored in dbm for [ENSG00000278390.5]
WARNING, no entry stored in dbm for [ENSG00000285269.2]
WARNING, no entry stored in dbm for [ENSG00000169164.7]
WARNING, no entry stored in dbm for [ENSG00000267309.1]
WARNING, no entry stored in dbm for [ENSG00000234694.1]
WARNING, no entry stored in dbm for [ENSG00000285887.1]
WARNING, no entry stored in dbm for [ENSG00000224628.2]
WARNING, no entry stored in dbm for [ENSG00000277460.1]
WARNING, no entry stored in dbm for [ENSG00000269091.6]
WARNING, no entry stored in dbm for [ENSG00000266802.1]
WARNING, no entry stored in dbm for [ENSG00000266802.1]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000273225.4]
WARNING, no entry stored in dbm for [ENSG00000231713.2]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000213091.2]
WARNING, no entry stored in dbm for [ENSG00000274642.1]
WARNING, no entry stored in dbm for [ENSG00000279047.4]
WARNING, no entry stored in dbm for [ENSG00000274767.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000249942.1]
WARNING, no entry stored in dbm for [ENSG00000260653.6]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000228613.1]
WARNING, no entry stored in dbm for [ENSG00000246596.7]
WARNING, no entry stored in dbm for [ENSG00000283273.1]
WARNING, no entry stored in dbm for [ENSG00000283709.1]
WARNING, no entry stored in dbm for [ENSG00000266865.6]
WARNING, no entry stored in dbm for [ENSG00000235778.1]
WARNING, no entry stored in dbm for [ENSG00000226029.1]
WARNING, no entry stored in dbm for [ENSG00000268081.1]
WARNING, no entry stored in dbm for [ENSG00000284675.1]
WARNING, no entry stored in dbm for [ENSG00000236722.1]
WARNING, no entry stored in dbm for [ENSG00000241612.1]
WARNING, no entry stored in dbm for [ENSG00000231804.1]
WARNING, no entry stored in dbm for [ENSG00000224011.1]
WARNING, no entry stored in dbm for [ENSG00000260549.2]
WARNING, no entry stored in dbm for [ENSG00000282375.1]
WARNING, no entry stored in dbm for [ENSG00000236439.4]
WARNING, no entry stored in dbm for [ENSG00000237868.1]
WARNING, no entry stored in dbm for [ENSG00000250910.8]
WARNING, no entry stored in dbm for [ENSG00000287676.1]
WARNING, no entry stored in dbm for [ENSG00000251378.1]
WARNING, no entry stored in dbm for [ENSG00000269559.2]
WARNING, no entry stored in dbm for [ENSG00000225605.3]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000279173.1]
WARNING, no entry stored in dbm for [ENSG00000272620.2]
WARNING, no entry stored in dbm for [ENSG00000269001.2]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000284783.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000257435.1]
WARNING, no entry stored in dbm for [ENSG00000271699.5]
WARNING, no entry stored in dbm for [ENSG00000284627.1]
WARNING, no entry stored in dbm for [ENSG00000284707.2]
WARNING, no entry stored in dbm for [ENSG00000250131.2]
WARNING, no entry stored in dbm for [ENSG00000257359.1]
WARNING, no entry stored in dbm for [ENSG00000250938.6]
WARNING, no entry stored in dbm for [ENSG00000227113.2]
WARNING, no entry stored in dbm for [ENSG00000229886.1]
WARNING, no entry stored in dbm for [ENSG00000240882.1]
WARNING, no entry stored in dbm for [ENSG00000197320.5]
WARNING, no entry stored in dbm for [ENSG00000254951.7]
WARNING, no entry stored in dbm for [ENSG00000259945.1]
WARNING, no entry stored in dbm for [ENSG00000287431.1]
WARNING, no entry stored in dbm for [ENSG00000235140.2]
WARNING, no entry stored in dbm for [ENSG00000248515.2]
WARNING, no entry stored in dbm for [ENSG00000255621.1]
WARNING, no entry stored in dbm for [ENSG00000285600.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000260441.5]
WARNING, no entry stored in dbm for [ENSG00000241717.1]
WARNING, no entry stored in dbm for [ENSG00000229852.4]
WARNING, no entry stored in dbm for [ENSG00000270820.6]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000184319.16]
WARNING, no entry stored in dbm for [ENSG00000274499.1]
WARNING, no entry stored in dbm for [ENSG00000283108.1]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000286797.1]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000244510.2]
WARNING, no entry stored in dbm for [ENSG00000267922.1]
WARNING, no entry stored in dbm for [ENSG00000267009.6]
WARNING, no entry stored in dbm for [ENSG00000264421.1]
WARNING, no entry stored in dbm for [ENSG00000255595.5]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000225480.1]
WARNING, no entry stored in dbm for [ENSG00000272693.4]
WARNING, no entry stored in dbm for [ENSG00000236531.2]
WARNING, no entry stored in dbm for [ENSG00000276718.1]
WARNING, no entry stored in dbm for [ENSG00000258891.1]
WARNING, no entry stored in dbm for [ENSG00000224699.9]
WARNING, no entry stored in dbm for [ENSG00000243004.6]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000250778.1]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000286423.1]
WARNING, no entry stored in dbm for [ENSG00000260510.1]
WARNING, no entry stored in dbm for [ENSG00000212663.2]
WARNING, no entry stored in dbm for [ENSG00000187984.13]
WARNING, no entry stored in dbm for [ENSG00000250271.2]


	* STAR-Fusion complete.  See output: /tmp/nxf.X8JTuwlnVg/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)