AIH curated blacklist: matched 6 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 151
Pass (FILTER=PASS): 4 (2.6%)
Fail (FILTER=FAIL): 147 (97.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 6
All 6 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 35
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 21
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 12
confidence_below_min(low<high): 8
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
total_reads_below_min(3.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(low<high);aih_curated_blacklist: 2
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 2
Breakdown by confidence:
high: 4 pass, 6 fail (total: 10)
low: 0 pass, 57 fail (total: 57)
medium: 0 pass, 84 fail (total: 84)
Arriba filter: 151 rows -> 4 PASS; wrote 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filtered.tsv and 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filter_summary.txt