File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/68/c985401a75412598ac22a0734b85b1/.command.err
Size
565 bytes
Task
NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (1173_CI9_T1_RNA_SLD_01_A23T55JLT4_1)
Attempt

Content

View in new tab 
Processing Kallisto file: 1173_CI9_T1_RNA_SLD_01_A23T55JLT4_1/abundance.h5
Successfully converted 1173_CI9_T1_RNA_SLD_01_A23T55JLT4_1/abundance.h5 to 1173_CI9_T1_RNA_SLD_01_A23T55JLT4_1_kallisto_mqc.tsv
  Sample: 1173_CI9_T1_RNA_SLD_01_A23T55JLT4_1
  Mean Fragment Length: 104.1 bp
  Median Fragment Length: 98.0 bp
  pct_mito_est_counts: 0.011%
  pct_ribo_est_counts: 0.727%
  pct_hk_est_counts: 0.481%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.021%
  pct_ribo_tpm: 2.118%
  pct_hk_tpm: 0.709%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 5.491%