Using GATK jar /usr/local/share/gatk4-4.4.0.0-0/gatk-package-4.4.0.0-local.jar
Running:
java -Dsamjdk.use_async_io_read_samtools=false -Dsamjdk.use_async_io_write_samtools=true -Dsamjdk.use_async_io_write_tribble=false -Dsamjdk.compression_level=2 -Xmx60620M -XX:-UsePerfData -XX:ParallelGCThreads=2 -jar /usr/local/share/gatk4-4.4.0.0-0/gatk-package-4.4.0.0-local.jar MarkDuplicates --INPUT 1173_DSO_T1_RNA_SLD_01_A23T55JLT4_1.Aligned.sortedByCoord.out.bam --OUTPUT 1173_DSO_T1_RNA_SLD_01_A23T55JLT4_1.md.bam --METRICS_FILE 1173_DSO_T1_RNA_SLD_01_A23T55JLT4_1.md.bam.metrics --TMP_DIR . --CREATE_INDEX true --REFERENCE_SEQUENCE ref_genome.fa -REMOVE_DUPLICATES false -VALIDATION_STRINGENCY LENIENT
08:38:36.010 INFO NativeLibraryLoader - Loading libgkl_compression.so from jar:file:/usr/local/share/gatk4-4.4.0.0-0/gatk-package-4.4.0.0-local.jar!/com/intel/gkl/native/libgkl_compression.so
[Mon Jun 08 08:38:36 GMT 2026] MarkDuplicates --INPUT 1173_DSO_T1_RNA_SLD_01_A23T55JLT4_1.Aligned.sortedByCoord.out.bam --OUTPUT 1173_DSO_T1_RNA_SLD_01_A23T55JLT4_1.md.bam --METRICS_FILE 1173_DSO_T1_RNA_SLD_01_A23T55JLT4_1.md.bam.metrics --REMOVE_DUPLICATES false --TMP_DIR . --VALIDATION_STRINGENCY LENIENT --CREATE_INDEX true --REFERENCE_SEQUENCE ref_genome.fa --MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP 50000 --MAX_FILE_HANDLES_FOR_READ_ENDS_MAP 8000 --SORTING_COLLECTION_SIZE_RATIO 0.25 --TAG_DUPLICATE_SET_MEMBERS false --REMOVE_SEQUENCING_DUPLICATES false --TAGGING_POLICY DontTag --CLEAR_DT true --DUPLEX_UMI false --FLOW_MODE false --FLOW_QUALITY_SUM_STRATEGY false --USE_END_IN_UNPAIRED_READS false --USE_UNPAIRED_CLIPPED_END false --UNPAIRED_END_UNCERTAINTY 0 --FLOW_SKIP_FIRST_N_FLOWS 0 --FLOW_Q_IS_KNOWN_END false --FLOW_EFFECTIVE_QUALITY_THRESHOLD 15 --ADD_PG_TAG_TO_READS true --ASSUME_SORTED false --DUPLICATE_SCORING_STRATEGY SUM_OF_BASE_QUALITIES --PROGRAM_RECORD_ID MarkDuplicates --PROGRAM_GROUP_NAME MarkDuplicates --READ_NAME_REGEX <optimized capture of last three ':' separated fields as numeric values> --OPTICAL_DUPLICATE_PIXEL_DISTANCE 100 --MAX_OPTICAL_DUPLICATE_SET_SIZE 300000 --VERBOSITY INFO --QUIET false --COMPRESSION_LEVEL 2 --MAX_RECORDS_IN_RAM 500000 --CREATE_MD5_FILE false --help false --version false --showHidden false --USE_JDK_DEFLATER false --USE_JDK_INFLATER false
[Mon Jun 08 08:38:36 GMT 2026] Executing as ?@nf-772bffca9c59d7433f2739cdc979ed15-c318f-2hqzc on Linux 6.12.88 amd64; OpenJDK 64-Bit Server VM 17.0.3-internal+0-adhoc..src; Deflater: Intel; Inflater: Intel; Provider GCS is available; Picard version: Version:4.4.0.0
INFO 2026-06-08 08:38:36 MarkDuplicates Start of doWork freeMemory: 105828512; totalMemory: 134217728; maxMemory: 63585648640
INFO 2026-06-08 08:38:36 MarkDuplicates Reading input file and constructing read end information.
INFO 2026-06-08 08:38:36 MarkDuplicates Will retain up to 230382784 data points before spilling to disk.
INFO 2026-06-08 08:38:42 MarkDuplicates Read 1,000,000 records. Elapsed time: 00:00:03s. Time for last 1,000,000: 3s. Last read position: chr1:1,354,900
INFO 2026-06-08 08:38:42 MarkDuplicates Tracking 2837 as yet unmatched pairs. 64 records in RAM.
INFO 2026-06-08 08:38:44 MarkDuplicates Read 2,000,000 records. Elapsed time: 00:00:06s. Time for last 1,000,000: 2s. Last read position: chr1:1,804,552
INFO 2026-06-08 08:38:44 MarkDuplicates Tracking 5664 as yet unmatched pairs. 100 records in RAM.
INFO 2026-06-08 08:38:50 MarkDuplicates Read 3,000,000 records. Elapsed time: 00:00:12s. Time for last 1,000,000: 5s. Last read position: chr1:6,468,276
INFO 2026-06-08 08:38:50 MarkDuplicates Tracking 9220 as yet unmatched pairs. 283 records in RAM.
INFO 2026-06-08 08:38:53 MarkDuplicates Read 4,000,000 records. Elapsed time: 00:00:15s. Time for last 1,000,000: 2s. Last read position: chr1:8,861,393
INFO 2026-06-08 08:38:53 MarkDuplicates Tracking 12773 as yet unmatched pairs. 956 records in RAM.
INFO 2026-06-08 08:38:56 MarkDuplicates Read 5,000,000 records. Elapsed time: 00:00:18s. Time for last 1,000,000: 2s. Last read position: chr1:11,055,786
INFO 2026-06-08 08:38:56 MarkDuplicates Tracking 14883 as yet unmatched pairs. 112 records in RAM.
INFO 2026-06-08 08:38:59 MarkDuplicates Read 6,000,000 records. Elapsed time: 00:00:21s. Time for last 1,000,000: 3s. Last read position: chr1:15,562,208
INFO 2026-06-08 08:38:59 MarkDuplicates Tracking 17602 as yet unmatched pairs. 41 records in RAM.
INFO 2026-06-08 08:39:01 MarkDuplicates Read 7,000,000 records. Elapsed time: 00:00:23s. Time for last 1,000,000: 2s. Last read position: chr1:16,693,921
INFO 2026-06-08 08:39:01 MarkDuplicates Tracking 20082 as yet unmatched pairs. 27 records in RAM.
INFO 2026-06-08 08:39:04 MarkDuplicates Read 8,000,000 records. Elapsed time: 00:00:26s. Time for last 1,000,000: 3s. Last read position: chr1:19,258,743
INFO 2026-06-08 08:39:04 MarkDuplicates Tracking 22976 as yet unmatched pairs. 79 records in RAM.
INFO 2026-06-08 08:39:08 MarkDuplicates Read 9,000,000 records. Elapsed time: 00:00:30s. Time for last 1,000,000: 3s. Last read position: chr1:21,823,305
INFO 2026-06-08 08:39:08 MarkDuplicates Tracking 26043 as yet unmatched pairs. 358 records in RAM.
INFO 2026-06-08 08:39:11 MarkDuplicates Read 10,000,000 records. Elapsed time: 00:00:33s. Time for last 1,000,000: 3s. Last read position: chr1:22,086,710
INFO 2026-06-08 08:39:11 MarkDuplicates Tracking 29227 as yet unmatched pairs. 474 records in RAM.
INFO 2026-06-08 08:39:14 MarkDuplicates Read 11,000,000 records. Elapsed time: 00:00:35s. Time for last 1,000,000: 2s. Last read position: chr1:23,695,800
INFO 2026-06-08 08:39:14 MarkDuplicates Tracking 31773 as yet unmatched pairs. 257 records in RAM.
INFO 2026-06-08 08:39:17 MarkDuplicates Read 12,000,000 records. Elapsed time: 00:00:38s. Time for last 1,000,000: 2s. Last read position: chr1:26,170,096
INFO 2026-06-08 08:39:17 MarkDuplicates Tracking 34213 as yet unmatched pairs. 53 records in RAM.
INFO 2026-06-08 08:39:20 MarkDuplicates Read 13,000,000 records. Elapsed time: 00:00:42s. Time for last 1,000,000: 3s. Last read position: chr1:27,283,398
INFO 2026-06-08 08:39:20 MarkDuplicates Tracking 37000 as yet unmatched pairs. 90 records in RAM.
INFO 2026-06-08 08:39:23 MarkDuplicates Read 14,000,000 records. Elapsed time: 00:00:44s. Time for last 1,000,000: 2s. Last read position: chr1:30,877,095
INFO 2026-06-08 08:39:23 MarkDuplicates Tracking 39869 as yet unmatched pairs. 271 records in RAM.
INFO 2026-06-08 08:39:25 MarkDuplicates Read 15,000,000 records. Elapsed time: 00:00:47s. Time for last 1,000,000: 2s. Last read position: chr1:32,324,479
INFO 2026-06-08 08:39:25 MarkDuplicates Tracking 42611 as yet unmatched pairs. 96 records in RAM.
INFO 2026-06-08 08:39:28 MarkDuplicates Read 16,000,000 records. Elapsed time: 00:00:50s. Time for last 1,000,000: 3s. Last read position: chr1:35,192,225
INFO 2026-06-08 08:39:28 MarkDuplicates Tracking 45401 as yet unmatched pairs. 78 records in RAM.
INFO 2026-06-08 08:39:31 MarkDuplicates Read 17,000,000 records. Elapsed time: 00:00:52s. Time for last 1,000,000: 2s. Last read position: chr1:37,475,737
INFO 2026-06-08 08:39:31 MarkDuplicates Tracking 48355 as yet unmatched pairs. 90 records in RAM.
INFO 2026-06-08 08:39:33 MarkDuplicates Read 18,000,000 records. Elapsed time: 00:00:54s. Time for last 1,000,000: 2s. Last read position: chr1:40,064,310
INFO 2026-06-08 08:39:33 MarkDuplicates Tracking 50898 as yet unmatched pairs. 92 records in RAM.
INFO 2026-06-08 08:39:37 MarkDuplicates Read 19,000,000 records. Elapsed time: 00:00:58s. Time for last 1,000,000: 3s. Last read position: chr1:43,385,977
INFO 2026-06-08 08:39:37 MarkDuplicates Tracking 53828 as yet unmatched pairs. 93 records in RAM.
INFO 2026-06-08 08:39:39 MarkDuplicates Read 20,000,000 records. Elapsed time: 00:01:01s. Time for last 1,000,000: 2s. Last read position: chr1:44,775,591
INFO 2026-06-08 08:39:39 MarkDuplicates Tracking 56862 as yet unmatched pairs. 149 records in RAM.
INFO 2026-06-08 08:39:42 MarkDuplicates Read 21,000,000 records. Elapsed time: 00:01:03s. Time for last 1,000,000: 2s. Last read position: chr1:46,665,290
INFO 2026-06-08 08:39:42 MarkDuplicates Tracking 59454 as yet unmatched pairs. 52 records in RAM.
INFO 2026-06-08 08:39:44 MarkDuplicates Read 22,000,000 records. Elapsed time: 00:01:06s. Time for last 1,000,000: 2s. Last read position: chr1:54,281,444
INFO 2026-06-08 08:39:44 MarkDuplicates Tracking 62358 as yet unmatched pairs. 172 records in RAM.
INFO 2026-06-08 08:39:47 MarkDuplicates Read 23,000,000 records. Elapsed time: 00:01:09s. Time for last 1,000,000: 3s. Last read position: chr1:65,226,252
INFO 2026-06-08 08:39:47 MarkDuplicates Tracking 64890 as yet unmatched pairs. 37 records in RAM.
INFO 2026-06-08 08:39:50 MarkDuplicates Read 24,000,000 records. Elapsed time: 00:01:12s. Time for last 1,000,000: 2s. Last read position: chr1:86,565,940
INFO 2026-06-08 08:39:50 MarkDuplicates Tracking 67478 as yet unmatched pairs. 86 records in RAM.
INFO 2026-06-08 08:39:53 MarkDuplicates Read 25,000,000 records. Elapsed time: 00:01:14s. Time for last 1,000,000: 2s. Last read position: chr1:101,239,487
INFO 2026-06-08 08:39:53 MarkDuplicates Tracking 69731 as yet unmatched pairs. 48 records in RAM.
INFO 2026-06-08 08:39:55 MarkDuplicates Read 26,000,000 records. Elapsed time: 00:01:17s. Time for last 1,000,000: 2s. Last read position: chr1:109,758,606
INFO 2026-06-08 08:39:55 MarkDuplicates Tracking 72686 as yet unmatched pairs. 402 records in RAM.
INFO 2026-06-08 08:39:57 MarkDuplicates Read 27,000,000 records. Elapsed time: 00:01:19s. Time for last 1,000,000: 2s. Last read position: chr1:113,683,562
INFO 2026-06-08 08:39:57 MarkDuplicates Tracking 74984 as yet unmatched pairs. 122 records in RAM.
INFO 2026-06-08 08:40:00 MarkDuplicates Read 28,000,000 records. Elapsed time: 00:01:22s. Time for last 1,000,000: 2s. Last read position: chr1:117,076,719
INFO 2026-06-08 08:40:00 MarkDuplicates Tracking 77448 as yet unmatched pairs. 76 records in RAM.
INFO 2026-06-08 08:40:02 MarkDuplicates Read 29,000,000 records. Elapsed time: 00:01:24s. Time for last 1,000,000: 2s. Last read position: chr1:143,904,251
INFO 2026-06-08 08:40:02 MarkDuplicates Tracking 79359 as yet unmatched pairs. 44 records in RAM.
INFO 2026-06-08 08:40:04 MarkDuplicates Read 30,000,000 records. Elapsed time: 00:01:26s. Time for last 1,000,000: 2s. Last read position: chr1:146,989,570
INFO 2026-06-08 08:40:04 MarkDuplicates Tracking 80685 as yet unmatched pairs. 105 records in RAM.
INFO 2026-06-08 08:40:07 MarkDuplicates Read 31,000,000 records. Elapsed time: 00:01:28s. Time for last 1,000,000: 2s. Last read position: chr1:149,811,955
INFO 2026-06-08 08:40:07 MarkDuplicates Tracking 82220 as yet unmatched pairs. 383 records in RAM.
INFO 2026-06-08 08:40:09 MarkDuplicates Read 32,000,000 records. Elapsed time: 00:01:31s. Time for last 1,000,000: 2s. Last read position: chr1:150,511,054
INFO 2026-06-08 08:40:09 MarkDuplicates Tracking 83997 as yet unmatched pairs. 59 records in RAM.
INFO 2026-06-08 08:40:12 MarkDuplicates Read 33,000,000 records. Elapsed time: 00:01:33s. Time for last 1,000,000: 2s. Last read position: chr1:151,365,675
INFO 2026-06-08 08:40:12 MarkDuplicates Tracking 87260 as yet unmatched pairs. 583 records in RAM.
INFO 2026-06-08 08:40:13 MarkDuplicates Read 34,000,000 records. Elapsed time: 00:01:35s. Time for last 1,000,000: 1s. Last read position: chr1:153,930,359
INFO 2026-06-08 08:40:13 MarkDuplicates Tracking 89287 as yet unmatched pairs. 83 records in RAM.
INFO 2026-06-08 08:40:16 MarkDuplicates Read 35,000,000 records. Elapsed time: 00:01:37s. Time for last 1,000,000: 2s. Last read position: chr1:154,259,986
INFO 2026-06-08 08:40:16 MarkDuplicates Tracking 91766 as yet unmatched pairs. 139 records in RAM.
INFO 2026-06-08 08:40:18 MarkDuplicates Read 36,000,000 records. Elapsed time: 00:01:39s. Time for last 1,000,000: 2s. Last read position: chr1:155,192,299
INFO 2026-06-08 08:40:18 MarkDuplicates Tracking 94466 as yet unmatched pairs. 44 records in RAM.
INFO 2026-06-08 08:40:20 MarkDuplicates Read 37,000,000 records. Elapsed time: 00:01:42s. Time for last 1,000,000: 2s. Last read position: chr1:156,011,849
INFO 2026-06-08 08:40:20 MarkDuplicates Tracking 96978 as yet unmatched pairs. 211 records in RAM.
INFO 2026-06-08 08:40:22 MarkDuplicates Read 38,000,000 records. Elapsed time: 00:01:44s. Time for last 1,000,000: 2s. Last read position: chr1:156,338,164
INFO 2026-06-08 08:40:22 MarkDuplicates Tracking 99967 as yet unmatched pairs. 25 records in RAM.
INFO 2026-06-08 08:40:25 MarkDuplicates Read 39,000,000 records. Elapsed time: 00:01:46s. Time for last 1,000,000: 2s. Last read position: chr1:160,239,753
INFO 2026-06-08 08:40:25 MarkDuplicates Tracking 102971 as yet unmatched pairs. 285 records in RAM.
INFO 2026-06-08 08:40:27 MarkDuplicates Read 40,000,000 records. Elapsed time: 00:01:49s. Time for last 1,000,000: 2s. Last read position: chr1:166,166,065
INFO 2026-06-08 08:40:27 MarkDuplicates Tracking 105094 as yet unmatched pairs. 27 records in RAM.
INFO 2026-06-08 08:40:30 MarkDuplicates Read 41,000,000 records. Elapsed time: 00:01:52s. Time for last 1,000,000: 2s. Last read position: chr1:171,588,458
INFO 2026-06-08 08:40:30 MarkDuplicates Tracking 107621 as yet unmatched pairs. 83 records in RAM.
INFO 2026-06-08 08:40:33 MarkDuplicates Read 42,000,000 records. Elapsed time: 00:01:54s. Time for last 1,000,000: 2s. Last read position: chr1:182,883,577
INFO 2026-06-08 08:40:33 MarkDuplicates Tracking 110411 as yet unmatched pairs. 197 records in RAM.
INFO 2026-06-08 08:40:35 MarkDuplicates Read 43,000,000 records. Elapsed time: 00:01:57s. Time for last 1,000,000: 2s. Last read position: chr1:193,069,052
INFO 2026-06-08 08:40:35 MarkDuplicates Tracking 112612 as yet unmatched pairs. 73 records in RAM.
INFO 2026-06-08 08:40:38 MarkDuplicates Read 44,000,000 records. Elapsed time: 00:02:00s. Time for last 1,000,000: 2s. Last read position: chr1:202,011,128
INFO 2026-06-08 08:40:38 MarkDuplicates Tracking 115329 as yet unmatched pairs. 135 records in RAM.
INFO 2026-06-08 08:40:41 MarkDuplicates Read 45,000,000 records. Elapsed time: 00:02:02s. Time for last 1,000,000: 2s. Last read position: chr1:204,259,664
INFO 2026-06-08 08:40:41 MarkDuplicates Tracking 117886 as yet unmatched pairs. 49 records in RAM.
INFO 2026-06-08 08:40:43 MarkDuplicates Read 46,000,000 records. Elapsed time: 00:02:04s. Time for last 1,000,000: 2s. Last read position: chr1:206,939,255
INFO 2026-06-08 08:40:43 MarkDuplicates Tracking 120664 as yet unmatched pairs. 268 records in RAM.
INFO 2026-06-08 08:40:44 MarkDuplicates Read 47,000,000 records. Elapsed time: 00:02:06s. Time for last 1,000,000: 1s. Last read position: chr1:213,997,887
INFO 2026-06-08 08:40:44 MarkDuplicates Tracking 123152 as yet unmatched pairs. 63 records in RAM.
INFO 2026-06-08 08:40:46 MarkDuplicates Read 48,000,000 records. Elapsed time: 00:02:08s. Time for last 1,000,000: 1s. Last read position: chr1:225,567,310
INFO 2026-06-08 08:40:46 MarkDuplicates Tracking 125677 as yet unmatched pairs. 150 records in RAM.
INFO 2026-06-08 08:40:49 MarkDuplicates Read 49,000,000 records. Elapsed time: 00:02:10s. Time for last 1,000,000: 2s. Last read position: chr1:228,146,047
INFO 2026-06-08 08:40:49 MarkDuplicates Tracking 128266 as yet unmatched pairs. 161 records in RAM.
INFO 2026-06-08 08:40:51 MarkDuplicates Read 50,000,000 records. Elapsed time: 00:02:13s. Time for last 1,000,000: 2s. Last read position: chr1:234,608,938
INFO 2026-06-08 08:40:51 MarkDuplicates Tracking 131896 as yet unmatched pairs. 561 records in RAM.
INFO 2026-06-08 08:40:53 MarkDuplicates Read 51,000,000 records. Elapsed time: 00:02:15s. Time for last 1,000,000: 1s. Last read position: chr1:244,862,705
INFO 2026-06-08 08:40:53 MarkDuplicates Tracking 134736 as yet unmatched pairs. 670 records in RAM.
INFO 2026-06-08 08:40:57 MarkDuplicates Read 52,000,000 records. Elapsed time: 00:02:19s. Time for last 1,000,000: 4s. Last read position: chr2:8,800,405
INFO 2026-06-08 08:40:57 MarkDuplicates Tracking 136977 as yet unmatched pairs. 135843 records in RAM.
INFO 2026-06-08 08:41:01 MarkDuplicates Read 53,000,000 records. Elapsed time: 00:02:22s. Time for last 1,000,000: 3s. Last read position: chr2:20,037,355
INFO 2026-06-08 08:41:01 MarkDuplicates Tracking 139918 as yet unmatched pairs. 138761 records in RAM.
INFO 2026-06-08 08:41:03 MarkDuplicates Read 54,000,000 records. Elapsed time: 00:02:25s. Time for last 1,000,000: 2s. Last read position: chr2:25,245,265
INFO 2026-06-08 08:41:03 MarkDuplicates Tracking 142468 as yet unmatched pairs. 141290 records in RAM.
INFO 2026-06-08 08:41:06 MarkDuplicates Read 55,000,000 records. Elapsed time: 00:02:27s. Time for last 1,000,000: 2s. Last read position: chr2:27,370,744
INFO 2026-06-08 08:41:06 MarkDuplicates Tracking 145342 as yet unmatched pairs. 144149 records in RAM.
INFO 2026-06-08 08:41:08 MarkDuplicates Read 56,000,000 records. Elapsed time: 00:02:30s. Time for last 1,000,000: 2s. Last read position: chr2:32,549,375
INFO 2026-06-08 08:41:08 MarkDuplicates Tracking 147923 as yet unmatched pairs. 146708 records in RAM.
INFO 2026-06-08 08:41:10 MarkDuplicates Read 57,000,000 records. Elapsed time: 00:02:32s. Time for last 1,000,000: 2s. Last read position: chr2:32,916,262
INFO 2026-06-08 08:41:10 MarkDuplicates Tracking 243174 as yet unmatched pairs. 141877 records in RAM.
INFO 2026-06-08 08:41:13 MarkDuplicates Read 58,000,000 records. Elapsed time: 00:02:35s. Time for last 1,000,000: 2s. Last read position: chr2:32,916,264
INFO 2026-06-08 08:41:13 MarkDuplicates Tracking 794759 as yet unmatched pairs. 114414 records in RAM.
INFO 2026-06-08 08:41:16 MarkDuplicates Read 59,000,000 records. Elapsed time: 00:02:38s. Time for last 1,000,000: 3s. Last read position: chr2:32,916,360
INFO 2026-06-08 08:41:16 MarkDuplicates Tracking 1331177 as yet unmatched pairs. 87778 records in RAM.
INFO 2026-06-08 08:41:18 MarkDuplicates Read 60,000,000 records. Elapsed time: 00:02:40s. Time for last 1,000,000: 2s. Last read position: chr2:32,916,406
INFO 2026-06-08 08:41:18 MarkDuplicates Tracking 1428958 as yet unmatched pairs. 82757 records in RAM.
INFO 2026-06-08 08:41:20 MarkDuplicates Read 61,000,000 records. Elapsed time: 00:02:42s. Time for last 1,000,000: 1s. Last read position: chr2:32,916,409
INFO 2026-06-08 08:41:20 MarkDuplicates Tracking 1458603 as yet unmatched pairs. 81450 records in RAM.
INFO 2026-06-08 08:41:23 MarkDuplicates Read 62,000,000 records. Elapsed time: 00:02:45s. Time for last 1,000,000: 2s. Last read position: chr2:38,746,694
INFO 2026-06-08 08:41:23 MarkDuplicates Tracking 1538528 as yet unmatched pairs. 76115 records in RAM.
INFO 2026-06-08 08:41:25 MarkDuplicates Read 63,000,000 records. Elapsed time: 00:02:47s. Time for last 1,000,000: 2s. Last read position: chr2:43,888,607
INFO 2026-06-08 08:41:25 MarkDuplicates Tracking 1535473 as yet unmatched pairs. 73036 records in RAM.
INFO 2026-06-08 08:41:28 MarkDuplicates Read 64,000,000 records. Elapsed time: 00:02:50s. Time for last 1,000,000: 2s. Last read position: chr2:54,628,982
INFO 2026-06-08 08:41:28 MarkDuplicates Tracking 1532967 as yet unmatched pairs. 70504 records in RAM.
INFO 2026-06-08 08:41:30 MarkDuplicates Read 65,000,000 records. Elapsed time: 00:02:52s. Time for last 1,000,000: 2s. Last read position: chr2:60,920,605
INFO 2026-06-08 08:41:30 MarkDuplicates Tracking 1529767 as yet unmatched pairs. 67292 records in RAM.
INFO 2026-06-08 08:41:33 MarkDuplicates Read 66,000,000 records. Elapsed time: 00:02:55s. Time for last 1,000,000: 2s. Last read position: chr2:69,820,808
INFO 2026-06-08 08:41:33 MarkDuplicates Tracking 1527430 as yet unmatched pairs. 64935 records in RAM.
INFO 2026-06-08 08:41:35 MarkDuplicates Read 67,000,000 records. Elapsed time: 00:02:57s. Time for last 1,000,000: 2s. Last read position: chr2:73,914,785
INFO 2026-06-08 08:41:35 MarkDuplicates Tracking 1525070 as yet unmatched pairs. 62556 records in RAM.
INFO 2026-06-08 08:41:38 MarkDuplicates Read 68,000,000 records. Elapsed time: 00:02:59s. Time for last 1,000,000: 2s. Last read position: chr2:76,445,253
INFO 2026-06-08 08:41:38 MarkDuplicates Tracking 1522013 as yet unmatched pairs. 59479 records in RAM.
INFO 2026-06-08 08:41:40 MarkDuplicates Read 69,000,000 records. Elapsed time: 00:03:02s. Time for last 1,000,000: 2s. Last read position: chr2:86,957,914
INFO 2026-06-08 08:41:40 MarkDuplicates Tracking 1519532 as yet unmatched pairs. 56981 records in RAM.
INFO 2026-06-08 08:41:43 MarkDuplicates Read 70,000,000 records. Elapsed time: 00:03:05s. Time for last 1,000,000: 2s. Last read position: chr2:96,619,650
INFO 2026-06-08 08:41:43 MarkDuplicates Tracking 1517356 as yet unmatched pairs. 54782 records in RAM.
INFO 2026-06-08 08:41:45 MarkDuplicates Read 71,000,000 records. Elapsed time: 00:03:07s. Time for last 1,000,000: 2s. Last read position: chr2:101,859,774
INFO 2026-06-08 08:41:45 MarkDuplicates Tracking 1514675 as yet unmatched pairs. 52083 records in RAM.
INFO 2026-06-08 08:41:48 MarkDuplicates Read 72,000,000 records. Elapsed time: 00:03:10s. Time for last 1,000,000: 2s. Last read position: chr2:109,808,296
INFO 2026-06-08 08:41:48 MarkDuplicates Tracking 1512579 as yet unmatched pairs. 49968 records in RAM.
INFO 2026-06-08 08:41:50 MarkDuplicates Read 73,000,000 records. Elapsed time: 00:03:12s. Time for last 1,000,000: 1s. Last read position: chr2:113,596,750
INFO 2026-06-08 08:41:50 MarkDuplicates Tracking 1510949 as yet unmatched pairs. 48314 records in RAM.
INFO 2026-06-08 08:41:52 MarkDuplicates Read 74,000,000 records. Elapsed time: 00:03:13s. Time for last 1,000,000: 1s. Last read position: chr2:127,709,731
INFO 2026-06-08 08:41:52 MarkDuplicates Tracking 1508308 as yet unmatched pairs. 45642 records in RAM.
INFO 2026-06-08 08:41:54 MarkDuplicates Read 75,000,000 records. Elapsed time: 00:03:15s. Time for last 1,000,000: 2s. Last read position: chr2:138,013,935
INFO 2026-06-08 08:41:54 MarkDuplicates Tracking 1505872 as yet unmatched pairs. 43185 records in RAM.
INFO 2026-06-08 08:41:56 MarkDuplicates Read 76,000,000 records. Elapsed time: 00:03:18s. Time for last 1,000,000: 2s. Last read position: chr2:164,743,857
INFO 2026-06-08 08:41:56 MarkDuplicates Tracking 1503466 as yet unmatched pairs. 40751 records in RAM.
INFO 2026-06-08 08:41:59 MarkDuplicates Read 77,000,000 records. Elapsed time: 00:03:20s. Time for last 1,000,000: 2s. Last read position: chr2:174,571,727
INFO 2026-06-08 08:41:59 MarkDuplicates Tracking 1501074 as yet unmatched pairs. 38334 records in RAM.
INFO 2026-06-08 08:42:01 MarkDuplicates Read 78,000,000 records. Elapsed time: 00:03:23s. Time for last 1,000,000: 2s. Last read position: chr2:186,761,966
INFO 2026-06-08 08:42:01 MarkDuplicates Tracking 1498415 as yet unmatched pairs. 35642 records in RAM.
INFO 2026-06-08 08:42:04 MarkDuplicates Read 79,000,000 records. Elapsed time: 00:03:25s. Time for last 1,000,000: 2s. Last read position: chr2:189,007,911
INFO 2026-06-08 08:42:04 MarkDuplicates Tracking 1495829 as yet unmatched pairs. 33038 records in RAM.
INFO 2026-06-08 08:42:06 MarkDuplicates Read 80,000,000 records. Elapsed time: 00:03:27s. Time for last 1,000,000: 2s. Last read position: chr2:197,403,621
INFO 2026-06-08 08:42:06 MarkDuplicates Tracking 1492692 as yet unmatched pairs. 29887 records in RAM.
INFO 2026-06-08 08:42:08 MarkDuplicates Read 81,000,000 records. Elapsed time: 00:03:30s. Time for last 1,000,000: 2s. Last read position: chr2:202,635,432
INFO 2026-06-08 08:42:08 MarkDuplicates Tracking 1490154 as yet unmatched pairs. 27317 records in RAM.
INFO 2026-06-08 08:42:10 MarkDuplicates Read 82,000,000 records. Elapsed time: 00:03:32s. Time for last 1,000,000: 1s. Last read position: chr2:215,365,515
INFO 2026-06-08 08:42:10 MarkDuplicates Tracking 1488334 as yet unmatched pairs. 25485 records in RAM.
INFO 2026-06-08 08:42:12 MarkDuplicates Read 83,000,000 records. Elapsed time: 00:03:34s. Time for last 1,000,000: 2s. Last read position: chr2:215,404,438
INFO 2026-06-08 08:42:12 MarkDuplicates Tracking 1485796 as yet unmatched pairs. 22942 records in RAM.
INFO 2026-06-08 08:42:15 MarkDuplicates Read 84,000,000 records. Elapsed time: 00:03:37s. Time for last 1,000,000: 2s. Last read position: chr2:216,499,984
INFO 2026-06-08 08:42:15 MarkDuplicates Tracking 1482751 as yet unmatched pairs. 19881 records in RAM.
INFO 2026-06-08 08:42:18 MarkDuplicates Read 85,000,000 records. Elapsed time: 00:03:39s. Time for last 1,000,000: 2s. Last read position: chr2:218,429,847
INFO 2026-06-08 08:42:18 MarkDuplicates Tracking 1479895 as yet unmatched pairs. 17014 records in RAM.
INFO 2026-06-08 08:42:20 MarkDuplicates Read 86,000,000 records. Elapsed time: 00:03:42s. Time for last 1,000,000: 2s. Last read position: chr2:219,419,002
INFO 2026-06-08 08:42:20 MarkDuplicates Tracking 1477449 as yet unmatched pairs. 14543 records in RAM.
INFO 2026-06-08 08:42:22 MarkDuplicates Read 87,000,000 records. Elapsed time: 00:03:44s. Time for last 1,000,000: 2s. Last read position: chr2:227,472,483
INFO 2026-06-08 08:42:22 MarkDuplicates Tracking 1474117 as yet unmatched pairs. 11118 records in RAM.
INFO 2026-06-08 08:42:25 MarkDuplicates Read 88,000,000 records. Elapsed time: 00:03:47s. Time for last 1,000,000: 2s. Last read position: chr2:231,711,981
INFO 2026-06-08 08:42:25 MarkDuplicates Tracking 1472403 as yet unmatched pairs. 9389 records in RAM.
INFO 2026-06-08 08:42:28 MarkDuplicates Read 89,000,000 records. Elapsed time: 00:03:49s. Time for last 1,000,000: 2s. Last read position: chr2:237,352,530
INFO 2026-06-08 08:42:28 MarkDuplicates Tracking 1469331 as yet unmatched pairs. 6286 records in RAM.
INFO 2026-06-08 08:42:30 MarkDuplicates Read 90,000,000 records. Elapsed time: 00:03:51s. Time for last 1,000,000: 2s. Last read position: chr2:240,520,527
INFO 2026-06-08 08:42:30 MarkDuplicates Tracking 1466351 as yet unmatched pairs. 3282 records in RAM.
INFO 2026-06-08 08:42:32 MarkDuplicates Read 91,000,000 records. Elapsed time: 00:03:54s. Time for last 1,000,000: 2s. Last read position: chr2:241,789,735
INFO 2026-06-08 08:42:32 MarkDuplicates Tracking 1463391 as yet unmatched pairs. 306 records in RAM.
INFO 2026-06-08 08:42:35 MarkDuplicates Read 92,000,000 records. Elapsed time: 00:03:57s. Time for last 1,000,000: 3s. Last read position: chr3:9,947,814
INFO 2026-06-08 08:42:35 MarkDuplicates Tracking 1460570 as yet unmatched pairs. 65513 records in RAM.
INFO 2026-06-08 08:42:38 MarkDuplicates Read 93,000,000 records. Elapsed time: 00:04:00s. Time for last 1,000,000: 2s. Last read position: chr3:14,133,800
INFO 2026-06-08 08:42:38 MarkDuplicates Tracking 1457868 as yet unmatched pairs. 62797 records in RAM.
INFO 2026-06-08 08:42:40 MarkDuplicates Read 94,000,000 records. Elapsed time: 00:04:02s. Time for last 1,000,000: 2s. Last read position: chr3:30,644,805
INFO 2026-06-08 08:42:40 MarkDuplicates Tracking 1455643 as yet unmatched pairs. 60551 records in RAM.
INFO 2026-06-08 08:42:42 MarkDuplicates Read 95,000,000 records. Elapsed time: 00:04:04s. Time for last 1,000,000: 2s. Last read position: chr3:38,140,781
INFO 2026-06-08 08:42:42 MarkDuplicates Tracking 1453163 as yet unmatched pairs. 58041 records in RAM.
INFO 2026-06-08 08:42:45 MarkDuplicates Read 96,000,000 records. Elapsed time: 00:04:06s. Time for last 1,000,000: 2s. Last read position: chr3:42,194,910
INFO 2026-06-08 08:42:45 MarkDuplicates Tracking 1450443 as yet unmatched pairs. 55298 records in RAM.
INFO 2026-06-08 08:42:47 MarkDuplicates Read 97,000,000 records. Elapsed time: 00:04:09s. Time for last 1,000,000: 2s. Last read position: chr3:46,999,697
INFO 2026-06-08 08:42:47 MarkDuplicates Tracking 1448036 as yet unmatched pairs. 52868 records in RAM.
INFO 2026-06-08 08:42:50 MarkDuplicates Read 98,000,000 records. Elapsed time: 00:04:12s. Time for last 1,000,000: 3s. Last read position: chr3:47,875,685
INFO 2026-06-08 08:42:50 MarkDuplicates Tracking 1445009 as yet unmatched pairs. 49826 records in RAM.
INFO 2026-06-08 08:42:53 MarkDuplicates Read 99,000,000 records. Elapsed time: 00:04:14s. Time for last 1,000,000: 2s. Last read position: chr3:48,682,096
INFO 2026-06-08 08:42:53 MarkDuplicates Tracking 1442293 as yet unmatched pairs. 47098 records in RAM.
INFO 2026-06-08 08:42:55 MarkDuplicates Read 100,000,000 records. Elapsed time: 00:04:17s. Time for last 1,000,000: 2s. Last read position: chr3:49,126,006
INFO 2026-06-08 08:42:55 MarkDuplicates Tracking 1439440 as yet unmatched pairs. 44228 records in RAM.
INFO 2026-06-08 08:42:58 MarkDuplicates Read 101,000,000 records. Elapsed time: 00:04:19s. Time for last 1,000,000: 2s. Last read position: chr3:50,058,382
INFO 2026-06-08 08:42:58 MarkDuplicates Tracking 1436620 as yet unmatched pairs. 41399 records in RAM.
INFO 2026-06-08 08:43:00 MarkDuplicates Read 102,000,000 records. Elapsed time: 00:04:22s. Time for last 1,000,000: 2s. Last read position: chr3:51,988,559
INFO 2026-06-08 08:43:00 MarkDuplicates Tracking 1433733 as yet unmatched pairs. 38494 records in RAM.
INFO 2026-06-08 08:43:02 MarkDuplicates Read 103,000,000 records. Elapsed time: 00:04:24s. Time for last 1,000,000: 1s. Last read position: chr3:52,823,831
INFO 2026-06-08 08:43:02 MarkDuplicates Tracking 1430962 as yet unmatched pairs. 35709 records in RAM.
INFO 2026-06-08 08:43:04 MarkDuplicates Read 104,000,000 records. Elapsed time: 00:04:26s. Time for last 1,000,000: 2s. Last read position: chr3:58,142,685
INFO 2026-06-08 08:43:04 MarkDuplicates Tracking 1428680 as yet unmatched pairs. 33407 records in RAM.
INFO 2026-06-08 08:43:07 MarkDuplicates Read 105,000,000 records. Elapsed time: 00:04:28s. Time for last 1,000,000: 2s. Last read position: chr3:75,214,624
INFO 2026-06-08 08:43:07 MarkDuplicates Tracking 1425814 as yet unmatched pairs. 30497 records in RAM.
INFO 2026-06-08 08:43:09 MarkDuplicates Read 106,000,000 records. Elapsed time: 00:04:30s. Time for last 1,000,000: 2s. Last read position: chr3:105,552,166
INFO 2026-06-08 08:43:09 MarkDuplicates Tracking 1423444 as yet unmatched pairs. 28099 records in RAM.
INFO 2026-06-08 08:43:11 MarkDuplicates Read 107,000,000 records. Elapsed time: 00:04:33s. Time for last 1,000,000: 2s. Last read position: chr3:121,691,032
INFO 2026-06-08 08:43:11 MarkDuplicates Tracking 1420854 as yet unmatched pairs. 25485 records in RAM.
INFO 2026-06-08 08:43:14 MarkDuplicates Read 108,000,000 records. Elapsed time: 00:04:35s. Time for last 1,000,000: 2s. Last read position: chr3:124,927,808
INFO 2026-06-08 08:43:14 MarkDuplicates Tracking 1418708 as yet unmatched pairs. 23326 records in RAM.
INFO 2026-06-08 08:43:16 MarkDuplicates Read 109,000,000 records. Elapsed time: 00:04:38s. Time for last 1,000,000: 2s. Last read position: chr3:129,171,211
INFO 2026-06-08 08:43:16 MarkDuplicates Tracking 1415954 as yet unmatched pairs. 20535 records in RAM.
INFO 2026-06-08 08:43:19 MarkDuplicates Read 110,000,000 records. Elapsed time: 00:04:41s. Time for last 1,000,000: 2s. Last read position: chr3:138,622,332
INFO 2026-06-08 08:43:19 MarkDuplicates Tracking 1412786 as yet unmatched pairs. 17335 records in RAM.
INFO 2026-06-08 08:43:22 MarkDuplicates Read 111,000,000 records. Elapsed time: 00:04:43s. Time for last 1,000,000: 2s. Last read position: chr3:150,575,693
INFO 2026-06-08 08:43:22 MarkDuplicates Tracking 1410186 as yet unmatched pairs. 14712 records in RAM.
INFO 2026-06-08 08:43:24 MarkDuplicates Read 112,000,000 records. Elapsed time: 00:04:45s. Time for last 1,000,000: 2s. Last read position: chr3:170,360,621
INFO 2026-06-08 08:43:24 MarkDuplicates Tracking 1407915 as yet unmatched pairs. 12405 records in RAM.
INFO 2026-06-08 08:43:26 MarkDuplicates Read 113,000,000 records. Elapsed time: 00:04:48s. Time for last 1,000,000: 2s. Last read position: chr3:184,182,760
INFO 2026-06-08 08:43:26 MarkDuplicates Tracking 1405511 as yet unmatched pairs. 9979 records in RAM.
INFO 2026-06-08 08:43:29 MarkDuplicates Read 114,000,000 records. Elapsed time: 00:04:50s. Time for last 1,000,000: 2s. Last read position: chr3:186,064,430
INFO 2026-06-08 08:43:29 MarkDuplicates Tracking 1402719 as yet unmatched pairs. 7169 records in RAM.
INFO 2026-06-08 08:43:31 MarkDuplicates Read 115,000,000 records. Elapsed time: 00:04:52s. Time for last 1,000,000: 2s. Last read position: chr3:194,438,904
INFO 2026-06-08 08:43:31 MarkDuplicates Tracking 1400303 as yet unmatched pairs. 4742 records in RAM.
INFO 2026-06-08 08:43:33 MarkDuplicates Read 116,000,000 records. Elapsed time: 00:04:54s. Time for last 1,000,000: 2s. Last read position: chr3:195,725,689
INFO 2026-06-08 08:43:33 MarkDuplicates Tracking 1399519 as yet unmatched pairs. 3955 records in RAM.
INFO 2026-06-08 08:43:35 MarkDuplicates Read 117,000,000 records. Elapsed time: 00:04:57s. Time for last 1,000,000: 2s. Last read position: chr3:196,393,419
INFO 2026-06-08 08:43:35 MarkDuplicates Tracking 1396980 as yet unmatched pairs. 1408 records in RAM.
INFO 2026-06-08 08:43:38 MarkDuplicates Read 118,000,000 records. Elapsed time: 00:05:00s. Time for last 1,000,000: 3s. Last read position: chr4:967,296
INFO 2026-06-08 08:43:38 MarkDuplicates Tracking 1394256 as yet unmatched pairs. 40485 records in RAM.
INFO 2026-06-08 08:43:41 MarkDuplicates Read 119,000,000 records. Elapsed time: 00:05:02s. Time for last 1,000,000: 2s. Last read position: chr4:1,806,546
INFO 2026-06-08 08:43:41 MarkDuplicates Tracking 1391051 as yet unmatched pairs. 37257 records in RAM.
INFO 2026-06-08 08:43:43 MarkDuplicates Read 120,000,000 records. Elapsed time: 00:05:05s. Time for last 1,000,000: 2s. Last read position: chr4:3,428,114
INFO 2026-06-08 08:43:43 MarkDuplicates Tracking 1388077 as yet unmatched pairs. 34267 records in RAM.
INFO 2026-06-08 08:43:46 MarkDuplicates Read 121,000,000 records. Elapsed time: 00:05:08s. Time for last 1,000,000: 2s. Last read position: chr4:9,267,887
INFO 2026-06-08 08:43:46 MarkDuplicates Tracking 1385178 as yet unmatched pairs. 31342 records in RAM.
INFO 2026-06-08 08:43:49 MarkDuplicates Read 122,000,000 records. Elapsed time: 00:05:10s. Time for last 1,000,000: 2s. Last read position: chr4:24,808,401
INFO 2026-06-08 08:43:49 MarkDuplicates Tracking 1382574 as yet unmatched pairs. 28716 records in RAM.
INFO 2026-06-08 08:43:51 MarkDuplicates Read 123,000,000 records. Elapsed time: 00:05:13s. Time for last 1,000,000: 2s. Last read position: chr4:46,723,855
INFO 2026-06-08 08:43:51 MarkDuplicates Tracking 1379925 as yet unmatched pairs. 26029 records in RAM.
INFO 2026-06-08 08:43:53 MarkDuplicates Read 124,000,000 records. Elapsed time: 00:05:15s. Time for last 1,000,000: 2s. Last read position: chr4:57,040,848
INFO 2026-06-08 08:43:53 MarkDuplicates Tracking 1377732 as yet unmatched pairs. 23806 records in RAM.
INFO 2026-06-08 08:43:55 MarkDuplicates Read 125,000,000 records. Elapsed time: 00:05:17s. Time for last 1,000,000: 2s. Last read position: chr4:75,033,932
INFO 2026-06-08 08:43:55 MarkDuplicates Tracking 1374880 as yet unmatched pairs. 20940 records in RAM.
INFO 2026-06-08 08:43:58 MarkDuplicates Read 126,000,000 records. Elapsed time: 00:05:19s. Time for last 1,000,000: 2s. Last read position: chr4:83,107,847
INFO 2026-06-08 08:43:58 MarkDuplicates Tracking 1372177 as yet unmatched pairs. 18219 records in RAM.
INFO 2026-06-08 08:43:59 MarkDuplicates Read 127,000,000 records. Elapsed time: 00:05:21s. Time for last 1,000,000: 1s. Last read position: chr4:102,597,534
INFO 2026-06-08 08:43:59 MarkDuplicates Tracking 1369842 as yet unmatched pairs. 15863 records in RAM.
INFO 2026-06-08 08:44:01 MarkDuplicates Read 128,000,000 records. Elapsed time: 00:05:23s. Time for last 1,000,000: 2s. Last read position: chr4:119,030,648
INFO 2026-06-08 08:44:01 MarkDuplicates Tracking 1368135 as yet unmatched pairs. 14136 records in RAM.
INFO 2026-06-08 08:44:04 MarkDuplicates Read 129,000,000 records. Elapsed time: 00:05:26s. Time for last 1,000,000: 2s. Last read position: chr4:137,531,764
INFO 2026-06-08 08:44:04 MarkDuplicates Tracking 1365101 as yet unmatched pairs. 11087 records in RAM.
INFO 2026-06-08 08:44:06 MarkDuplicates Read 130,000,000 records. Elapsed time: 00:05:28s. Time for last 1,000,000: 2s. Last read position: chr4:148,436,024
INFO 2026-06-08 08:44:06 MarkDuplicates Tracking 1362654 as yet unmatched pairs. 8617 records in RAM.
INFO 2026-06-08 08:44:09 MarkDuplicates Read 131,000,000 records. Elapsed time: 00:05:30s. Time for last 1,000,000: 2s. Last read position: chr4:153,270,359
INFO 2026-06-08 08:44:09 MarkDuplicates Tracking 1361155 as yet unmatched pairs. 7097 records in RAM.
INFO 2026-06-08 08:44:11 MarkDuplicates Read 132,000,000 records. Elapsed time: 00:05:33s. Time for last 1,000,000: 2s. Last read position: chr4:169,117,564
INFO 2026-06-08 08:44:11 MarkDuplicates Tracking 1357583 as yet unmatched pairs. 3507 records in RAM.
INFO 2026-06-08 08:44:14 MarkDuplicates Read 133,000,000 records. Elapsed time: 00:05:36s. Time for last 1,000,000: 2s. Last read position: chr4:186,620,350
INFO 2026-06-08 08:44:14 MarkDuplicates Tracking 1355199 as yet unmatched pairs. 1105 records in RAM.
INFO 2026-06-08 08:44:17 MarkDuplicates Read 134,000,000 records. Elapsed time: 00:05:39s. Time for last 1,000,000: 3s. Last read position: chr5:6,600,059
INFO 2026-06-08 08:44:17 MarkDuplicates Tracking 1352402 as yet unmatched pairs. 60538 records in RAM.
INFO 2026-06-08 08:44:20 MarkDuplicates Read 135,000,000 records. Elapsed time: 00:05:41s. Time for last 1,000,000: 2s. Last read position: chr5:14,419,959
INFO 2026-06-08 08:44:20 MarkDuplicates Tracking 1349691 as yet unmatched pairs. 57800 records in RAM.
INFO 2026-06-08 08:44:22 MarkDuplicates Read 136,000,000 records. Elapsed time: 00:05:44s. Time for last 1,000,000: 2s. Last read position: chr5:31,305,233
INFO 2026-06-08 08:44:22 MarkDuplicates Tracking 1346727 as yet unmatched pairs. 54819 records in RAM.
INFO 2026-06-08 08:44:24 MarkDuplicates Read 137,000,000 records. Elapsed time: 00:05:46s. Time for last 1,000,000: 2s. Last read position: chr5:42,800,789
INFO 2026-06-08 08:44:24 MarkDuplicates Tracking 1344522 as yet unmatched pairs. 52599 records in RAM.
INFO 2026-06-08 08:44:27 MarkDuplicates Read 138,000,000 records. Elapsed time: 00:05:49s. Time for last 1,000,000: 2s. Last read position: chr5:69,269,278
INFO 2026-06-08 08:44:27 MarkDuplicates Tracking 1341931 as yet unmatched pairs. 49990 records in RAM.
INFO 2026-06-08 08:44:29 MarkDuplicates Read 139,000,000 records. Elapsed time: 00:05:51s. Time for last 1,000,000: 2s. Last read position: chr5:75,355,110
INFO 2026-06-08 08:44:29 MarkDuplicates Tracking 1339917 as yet unmatched pairs. 47956 records in RAM.
INFO 2026-06-08 08:44:31 MarkDuplicates Read 140,000,000 records. Elapsed time: 00:05:53s. Time for last 1,000,000: 2s. Last read position: chr5:87,376,535
INFO 2026-06-08 08:44:31 MarkDuplicates Tracking 1337559 as yet unmatched pairs. 45566 records in RAM.
INFO 2026-06-08 08:44:34 MarkDuplicates Read 141,000,000 records. Elapsed time: 00:05:55s. Time for last 1,000,000: 2s. Last read position: chr5:112,902,503
INFO 2026-06-08 08:44:34 MarkDuplicates Tracking 1335495 as yet unmatched pairs. 43478 records in RAM.
INFO 2026-06-08 08:44:36 MarkDuplicates Read 142,000,000 records. Elapsed time: 00:05:58s. Time for last 1,000,000: 2s. Last read position: chr5:130,994,516
INFO 2026-06-08 08:44:36 MarkDuplicates Tracking 1332516 as yet unmatched pairs. 40469 records in RAM.
INFO 2026-06-08 08:44:38 MarkDuplicates Read 143,000,000 records. Elapsed time: 00:06:00s. Time for last 1,000,000: 2s. Last read position: chr5:134,606,989
INFO 2026-06-08 08:44:38 MarkDuplicates Tracking 1329632 as yet unmatched pairs. 37567 records in RAM.
INFO 2026-06-08 08:44:41 MarkDuplicates Read 144,000,000 records. Elapsed time: 00:06:03s. Time for last 1,000,000: 2s. Last read position: chr5:136,056,734
INFO 2026-06-08 08:44:41 MarkDuplicates Tracking 1327004 as yet unmatched pairs. 34925 records in RAM.
INFO 2026-06-08 08:44:44 MarkDuplicates Read 145,000,000 records. Elapsed time: 00:06:05s. Time for last 1,000,000: 2s. Last read position: chr5:138,930,868
INFO 2026-06-08 08:44:44 MarkDuplicates Tracking 1324295 as yet unmatched pairs. 32197 records in RAM.
INFO 2026-06-08 08:44:46 MarkDuplicates Read 146,000,000 records. Elapsed time: 00:06:08s. Time for last 1,000,000: 2s. Last read position: chr5:141,201,724
INFO 2026-06-08 08:44:46 MarkDuplicates Tracking 1321996 as yet unmatched pairs. 29563 records in RAM.
INFO 2026-06-08 08:44:49 MarkDuplicates Read 147,000,000 records. Elapsed time: 00:06:10s. Time for last 1,000,000: 2s. Last read position: chr5:142,875,109
INFO 2026-06-08 08:44:49 MarkDuplicates Tracking 1319442 as yet unmatched pairs. 27002 records in RAM.
INFO 2026-06-08 08:44:51 MarkDuplicates Read 148,000,000 records. Elapsed time: 00:06:13s. Time for last 1,000,000: 2s. Last read position: chr5:150,121,969
INFO 2026-06-08 08:44:51 MarkDuplicates Tracking 1317354 as yet unmatched pairs. 24891 records in RAM.
INFO 2026-06-08 08:44:54 MarkDuplicates Read 149,000,000 records. Elapsed time: 00:06:15s. Time for last 1,000,000: 2s. Last read position: chr5:150,406,286
INFO 2026-06-08 08:44:54 MarkDuplicates Tracking 1316855 as yet unmatched pairs. 24379 records in RAM.
INFO 2026-06-08 08:44:56 MarkDuplicates Read 150,000,000 records. Elapsed time: 00:06:18s. Time for last 1,000,000: 2s. Last read position: chr5:151,663,485
INFO 2026-06-08 08:44:56 MarkDuplicates Tracking 1311510 as yet unmatched pairs. 19023 records in RAM.
INFO 2026-06-08 08:44:58 MarkDuplicates Read 151,000,000 records. Elapsed time: 00:06:20s. Time for last 1,000,000: 2s. Last read position: chr5:160,276,273
INFO 2026-06-08 08:44:58 MarkDuplicates Tracking 1308675 as yet unmatched pairs. 16162 records in RAM.
INFO 2026-06-08 08:45:01 MarkDuplicates Read 152,000,000 records. Elapsed time: 00:06:23s. Time for last 1,000,000: 2s. Last read position: chr5:171,392,919
INFO 2026-06-08 08:45:01 MarkDuplicates Tracking 1307271 as yet unmatched pairs. 14746 records in RAM.
INFO 2026-06-08 08:45:03 MarkDuplicates Read 153,000,000 records. Elapsed time: 00:06:25s. Time for last 1,000,000: 2s. Last read position: chr5:176,549,377
INFO 2026-06-08 08:45:03 MarkDuplicates Tracking 1303860 as yet unmatched pairs. 11307 records in RAM.
INFO 2026-06-08 08:45:06 MarkDuplicates Read 154,000,000 records. Elapsed time: 00:06:28s. Time for last 1,000,000: 2s. Last read position: chr5:177,516,180
INFO 2026-06-08 08:45:06 MarkDuplicates Tracking 1301052 as yet unmatched pairs. 8483 records in RAM.
INFO 2026-06-08 08:45:09 MarkDuplicates Read 155,000,000 records. Elapsed time: 00:06:31s. Time for last 1,000,000: 2s. Last read position: chr5:179,766,064
INFO 2026-06-08 08:45:09 MarkDuplicates Tracking 1298468 as yet unmatched pairs. 5875 records in RAM.
INFO 2026-06-08 08:45:12 MarkDuplicates Read 156,000,000 records. Elapsed time: 00:06:33s. Time for last 1,000,000: 2s. Last read position: chr5:179,836,473
INFO 2026-06-08 08:45:12 MarkDuplicates Tracking 1295716 as yet unmatched pairs. 3109 records in RAM.
INFO 2026-06-08 08:45:14 MarkDuplicates Read 157,000,000 records. Elapsed time: 00:06:36s. Time for last 1,000,000: 2s. Last read position: chr5:181,260,177
INFO 2026-06-08 08:45:14 MarkDuplicates Tracking 1292702 as yet unmatched pairs. 82 records in RAM.
INFO 2026-06-08 08:45:17 MarkDuplicates Read 158,000,000 records. Elapsed time: 00:06:39s. Time for last 1,000,000: 3s. Last read position: chr6:7,230,974
INFO 2026-06-08 08:45:17 MarkDuplicates Tracking 1290124 as yet unmatched pairs. 69013 records in RAM.
INFO 2026-06-08 08:45:20 MarkDuplicates Read 159,000,000 records. Elapsed time: 00:06:41s. Time for last 1,000,000: 2s. Last read position: chr6:13,365,438
INFO 2026-06-08 08:45:20 MarkDuplicates Tracking 1287073 as yet unmatched pairs. 65943 records in RAM.
INFO 2026-06-08 08:45:22 MarkDuplicates Read 160,000,000 records. Elapsed time: 00:06:44s. Time for last 1,000,000: 2s. Last read position: chr6:26,055,795
INFO 2026-06-08 08:45:22 MarkDuplicates Tracking 1284392 as yet unmatched pairs. 63220 records in RAM.
INFO 2026-06-08 08:45:25 MarkDuplicates Read 161,000,000 records. Elapsed time: 00:06:46s. Time for last 1,000,000: 2s. Last read position: chr6:27,147,260
INFO 2026-06-08 08:45:25 MarkDuplicates Tracking 1281507 as yet unmatched pairs. 60324 records in RAM.
INFO 2026-06-08 08:45:27 MarkDuplicates Read 162,000,000 records. Elapsed time: 00:06:49s. Time for last 1,000,000: 2s. Last read position: chr6:29,944,505
INFO 2026-06-08 08:45:27 MarkDuplicates Tracking 1279367 as yet unmatched pairs. 58179 records in RAM.
INFO 2026-06-08 08:45:29 MarkDuplicates Read 163,000,000 records. Elapsed time: 00:06:51s. Time for last 1,000,000: 2s. Last read position: chr6:30,744,075
INFO 2026-06-08 08:45:29 MarkDuplicates Tracking 1278431 as yet unmatched pairs. 57221 records in RAM.
INFO 2026-06-08 08:45:32 MarkDuplicates Read 164,000,000 records. Elapsed time: 00:06:53s. Time for last 1,000,000: 2s. Last read position: chr6:31,627,827
INFO 2026-06-08 08:45:32 MarkDuplicates Tracking 1273743 as yet unmatched pairs. 52513 records in RAM.
INFO 2026-06-08 08:45:34 MarkDuplicates Read 165,000,000 records. Elapsed time: 00:06:56s. Time for last 1,000,000: 2s. Last read position: chr6:31,736,291
INFO 2026-06-08 08:45:34 MarkDuplicates Tracking 1270938 as yet unmatched pairs. 49700 records in RAM.
INFO 2026-06-08 08:45:36 MarkDuplicates Read 166,000,000 records. Elapsed time: 00:06:58s. Time for last 1,000,000: 1s. Last read position: chr6:31,871,504
INFO 2026-06-08 08:45:36 MarkDuplicates Tracking 1268940 as yet unmatched pairs. 47700 records in RAM.
INFO 2026-06-08 08:45:38 MarkDuplicates Read 167,000,000 records. Elapsed time: 00:07:00s. Time for last 1,000,000: 2s. Last read position: chr6:32,115,761
INFO 2026-06-08 08:45:38 MarkDuplicates Tracking 1266481 as yet unmatched pairs. 45234 records in RAM.
INFO 2026-06-08 08:45:41 MarkDuplicates Read 168,000,000 records. Elapsed time: 00:07:02s. Time for last 1,000,000: 2s. Last read position: chr6:33,275,971
INFO 2026-06-08 08:45:41 MarkDuplicates Tracking 1264226 as yet unmatched pairs. 42968 records in RAM.
INFO 2026-06-08 08:45:43 MarkDuplicates Read 169,000,000 records. Elapsed time: 00:07:05s. Time for last 1,000,000: 2s. Last read position: chr6:33,686,091
INFO 2026-06-08 08:45:43 MarkDuplicates Tracking 1261036 as yet unmatched pairs. 39760 records in RAM.
INFO 2026-06-08 08:45:46 MarkDuplicates Read 170,000,000 records. Elapsed time: 00:07:07s. Time for last 1,000,000: 2s. Last read position: chr6:36,481,626
INFO 2026-06-08 08:45:46 MarkDuplicates Tracking 1258357 as yet unmatched pairs. 37065 records in RAM.
INFO 2026-06-08 08:45:48 MarkDuplicates Read 171,000,000 records. Elapsed time: 00:07:10s. Time for last 1,000,000: 2s. Last read position: chr6:42,822,992
INFO 2026-06-08 08:45:48 MarkDuplicates Tracking 1255477 as yet unmatched pairs. 34161 records in RAM.
INFO 2026-06-08 08:45:50 MarkDuplicates Read 172,000,000 records. Elapsed time: 00:07:12s. Time for last 1,000,000: 2s. Last read position: chr6:43,621,881
INFO 2026-06-08 08:45:50 MarkDuplicates Tracking 1252571 as yet unmatched pairs. 31248 records in RAM.
INFO 2026-06-08 08:45:52 MarkDuplicates Read 173,000,000 records. Elapsed time: 00:07:13s. Time for last 1,000,000: 1s. Last read position: chr6:52,985,517
INFO 2026-06-08 08:45:52 MarkDuplicates Tracking 1249960 as yet unmatched pairs. 28615 records in RAM.
INFO 2026-06-08 08:45:54 MarkDuplicates Read 174,000,000 records. Elapsed time: 00:07:16s. Time for last 1,000,000: 2s. Last read position: chr6:73,466,249
INFO 2026-06-08 08:45:54 MarkDuplicates Tracking 1247692 as yet unmatched pairs. 26262 records in RAM.
INFO 2026-06-08 08:45:56 MarkDuplicates Read 175,000,000 records. Elapsed time: 00:07:18s. Time for last 1,000,000: 2s. Last read position: chr6:85,615,066
INFO 2026-06-08 08:45:56 MarkDuplicates Tracking 1245603 as yet unmatched pairs. 24148 records in RAM.
INFO 2026-06-08 08:45:59 MarkDuplicates Read 176,000,000 records. Elapsed time: 00:07:21s. Time for last 1,000,000: 2s. Last read position: chr6:106,973,737
INFO 2026-06-08 08:45:59 MarkDuplicates Tracking 1242636 as yet unmatched pairs. 21169 records in RAM.
INFO 2026-06-08 08:46:02 MarkDuplicates Read 177,000,000 records. Elapsed time: 00:07:23s. Time for last 1,000,000: 2s. Last read position: chr6:113,860,385
INFO 2026-06-08 08:46:02 MarkDuplicates Tracking 1240350 as yet unmatched pairs. 18855 records in RAM.
INFO 2026-06-08 08:46:04 MarkDuplicates Read 178,000,000 records. Elapsed time: 00:07:26s. Time for last 1,000,000: 2s. Last read position: chr6:130,869,878
INFO 2026-06-08 08:46:04 MarkDuplicates Tracking 1237726 as yet unmatched pairs. 16208 records in RAM.
INFO 2026-06-08 08:46:06 MarkDuplicates Read 179,000,000 records. Elapsed time: 00:07:28s. Time for last 1,000,000: 2s. Last read position: chr6:136,697,264
INFO 2026-06-08 08:46:06 MarkDuplicates Tracking 1234718 as yet unmatched pairs. 13191 records in RAM.
INFO 2026-06-08 08:46:08 MarkDuplicates Read 180,000,000 records. Elapsed time: 00:07:30s. Time for last 1,000,000: 2s. Last read position: chr6:147,313,921
INFO 2026-06-08 08:46:08 MarkDuplicates Tracking 1232110 as yet unmatched pairs. 10561 records in RAM.
INFO 2026-06-08 08:46:10 MarkDuplicates Read 181,000,000 records. Elapsed time: 00:07:32s. Time for last 1,000,000: 1s. Last read position: chr6:156,778,148
INFO 2026-06-08 08:46:10 MarkDuplicates Tracking 1229692 as yet unmatched pairs. 8124 records in RAM.
INFO 2026-06-08 08:46:12 MarkDuplicates Read 182,000,000 records. Elapsed time: 00:07:34s. Time for last 1,000,000: 1s. Last read position: chr6:158,771,393
INFO 2026-06-08 08:46:12 MarkDuplicates Tracking 1227443 as yet unmatched pairs. 5861 records in RAM.
INFO 2026-06-08 08:46:15 MarkDuplicates Read 183,000,000 records. Elapsed time: 00:07:36s. Time for last 1,000,000: 2s. Last read position: chr6:163,563,710
INFO 2026-06-08 08:46:15 MarkDuplicates Tracking 1224468 as yet unmatched pairs. 2862 records in RAM.
INFO 2026-06-08 08:46:19 MarkDuplicates Read 184,000,000 records. Elapsed time: 00:07:40s. Time for last 1,000,000: 4s. Last read position: chr7:517,447
INFO 2026-06-08 08:46:19 MarkDuplicates Tracking 1221812 as yet unmatched pairs. 151364 records in RAM.
INFO 2026-06-08 08:46:21 MarkDuplicates Read 185,000,000 records. Elapsed time: 00:07:43s. Time for last 1,000,000: 2s. Last read position: chr7:2,244,637
INFO 2026-06-08 08:46:21 MarkDuplicates Tracking 1218297 as yet unmatched pairs. 147834 records in RAM.
INFO 2026-06-08 08:46:24 MarkDuplicates Read 186,000,000 records. Elapsed time: 00:07:45s. Time for last 1,000,000: 2s. Last read position: chr7:5,312,565
INFO 2026-06-08 08:46:24 MarkDuplicates Tracking 1215399 as yet unmatched pairs. 144925 records in RAM.
INFO 2026-06-08 08:46:27 MarkDuplicates Read 187,000,000 records. Elapsed time: 00:07:48s. Time for last 1,000,000: 3s. Last read position: chr7:5,377,955
INFO 2026-06-08 08:46:27 MarkDuplicates Tracking 1212176 as yet unmatched pairs. 141689 records in RAM.
INFO 2026-06-08 08:46:29 MarkDuplicates Read 188,000,000 records. Elapsed time: 00:07:51s. Time for last 1,000,000: 2s. Last read position: chr7:5,528,400
INFO 2026-06-08 08:46:29 MarkDuplicates Tracking 1210319 as yet unmatched pairs. 139820 records in RAM.
INFO 2026-06-08 08:46:32 MarkDuplicates Read 189,000,000 records. Elapsed time: 00:07:54s. Time for last 1,000,000: 2s. Last read position: chr7:6,040,963
INFO 2026-06-08 08:46:32 MarkDuplicates Tracking 1206156 as yet unmatched pairs. 135647 records in RAM.
INFO 2026-06-08 08:46:34 MarkDuplicates Read 190,000,000 records. Elapsed time: 00:07:56s. Time for last 1,000,000: 2s. Last read position: chr7:22,136,075
INFO 2026-06-08 08:46:34 MarkDuplicates Tracking 1203669 as yet unmatched pairs. 133141 records in RAM.
INFO 2026-06-08 08:46:37 MarkDuplicates Read 191,000,000 records. Elapsed time: 00:07:58s. Time for last 1,000,000: 2s. Last read position: chr7:27,828,703
INFO 2026-06-08 08:46:37 MarkDuplicates Tracking 1200971 as yet unmatched pairs. 130430 records in RAM.
INFO 2026-06-08 08:46:39 MarkDuplicates Read 192,000,000 records. Elapsed time: 00:08:01s. Time for last 1,000,000: 2s. Last read position: chr7:39,833,690
INFO 2026-06-08 08:46:39 MarkDuplicates Tracking 1198206 as yet unmatched pairs. 127625 records in RAM.
INFO 2026-06-08 08:46:42 MarkDuplicates Read 193,000,000 records. Elapsed time: 00:08:03s. Time for last 1,000,000: 2s. Last read position: chr7:44,113,674
INFO 2026-06-08 08:46:42 MarkDuplicates Tracking 1195817 as yet unmatched pairs. 125221 records in RAM.
INFO 2026-06-08 08:46:44 MarkDuplicates Read 194,000,000 records. Elapsed time: 00:08:05s. Time for last 1,000,000: 2s. Last read position: chr7:45,917,341
INFO 2026-06-08 08:46:44 MarkDuplicates Tracking 1193148 as yet unmatched pairs. 122538 records in RAM.
INFO 2026-06-08 08:46:46 MarkDuplicates Read 195,000,000 records. Elapsed time: 00:08:08s. Time for last 1,000,000: 2s. Last read position: chr7:55,711,362
INFO 2026-06-08 08:46:46 MarkDuplicates Tracking 1190416 as yet unmatched pairs. 119774 records in RAM.
INFO 2026-06-08 08:46:49 MarkDuplicates Read 196,000,000 records. Elapsed time: 00:08:10s. Time for last 1,000,000: 2s. Last read position: chr7:70,766,300
INFO 2026-06-08 08:46:49 MarkDuplicates Tracking 1188052 as yet unmatched pairs. 117393 records in RAM.
INFO 2026-06-08 08:46:51 MarkDuplicates Read 197,000,000 records. Elapsed time: 00:08:12s. Time for last 1,000,000: 1s. Last read position: chr7:73,243,349
INFO 2026-06-08 08:46:51 MarkDuplicates Tracking 1186835 as yet unmatched pairs. 116166 records in RAM.
INFO 2026-06-08 08:46:53 MarkDuplicates Read 198,000,000 records. Elapsed time: 00:08:15s. Time for last 1,000,000: 2s. Last read position: chr7:73,738,302
INFO 2026-06-08 08:46:53 MarkDuplicates Tracking 1184556 as yet unmatched pairs. 113884 records in RAM.
INFO 2026-06-08 08:46:55 MarkDuplicates Read 199,000,000 records. Elapsed time: 00:08:17s. Time for last 1,000,000: 2s. Last read position: chr7:74,728,799
INFO 2026-06-08 08:46:55 MarkDuplicates Tracking 1181477 as yet unmatched pairs. 110785 records in RAM.
INFO 2026-06-08 08:46:58 MarkDuplicates Read 200,000,000 records. Elapsed time: 00:08:19s. Time for last 1,000,000: 2s. Last read position: chr7:75,441,638
INFO 2026-06-08 08:46:58 MarkDuplicates Tracking 1179858 as yet unmatched pairs. 109159 records in RAM.
INFO 2026-06-08 08:47:00 MarkDuplicates Read 201,000,000 records. Elapsed time: 00:08:22s. Time for last 1,000,000: 2s. Last read position: chr7:76,304,000
INFO 2026-06-08 08:47:00 MarkDuplicates Tracking 1177672 as yet unmatched pairs. 106964 records in RAM.
INFO 2026-06-08 08:47:02 MarkDuplicates Read 202,000,000 records. Elapsed time: 00:08:24s. Time for last 1,000,000: 2s. Last read position: chr7:83,134,863
INFO 2026-06-08 08:47:02 MarkDuplicates Tracking 1175219 as yet unmatched pairs. 104501 records in RAM.
INFO 2026-06-08 08:47:05 MarkDuplicates Read 203,000,000 records. Elapsed time: 00:08:26s. Time for last 1,000,000: 2s. Last read position: chr7:94,004,187
INFO 2026-06-08 08:47:05 MarkDuplicates Tracking 1172841 as yet unmatched pairs. 102106 records in RAM.
INFO 2026-06-08 08:47:07 MarkDuplicates Read 204,000,000 records. Elapsed time: 00:08:29s. Time for last 1,000,000: 2s. Last read position: chr7:94,426,455
INFO 2026-06-08 08:47:07 MarkDuplicates Tracking 1170753 as yet unmatched pairs. 100012 records in RAM.
INFO 2026-06-08 08:47:10 MarkDuplicates Read 205,000,000 records. Elapsed time: 00:08:32s. Time for last 1,000,000: 2s. Last read position: chr7:98,984,283
INFO 2026-06-08 08:47:10 MarkDuplicates Tracking 1166785 as yet unmatched pairs. 96029 records in RAM.
INFO 2026-06-08 08:47:13 MarkDuplicates Read 206,000,000 records. Elapsed time: 00:08:34s. Time for last 1,000,000: 2s. Last read position: chr7:100,089,043
INFO 2026-06-08 08:47:13 MarkDuplicates Tracking 1164496 as yet unmatched pairs. 93729 records in RAM.
INFO 2026-06-08 08:47:15 MarkDuplicates Read 207,000,000 records. Elapsed time: 00:08:37s. Time for last 1,000,000: 2s. Last read position: chr7:100,602,540
INFO 2026-06-08 08:47:15 MarkDuplicates Tracking 1161690 as yet unmatched pairs. 90914 records in RAM.
INFO 2026-06-08 08:47:18 MarkDuplicates Read 208,000,000 records. Elapsed time: 00:08:39s. Time for last 1,000,000: 2s. Last read position: chr7:100,969,589
INFO 2026-06-08 08:47:18 MarkDuplicates Tracking 1159207 as yet unmatched pairs. 88420 records in RAM.
INFO 2026-06-08 08:47:20 MarkDuplicates Read 209,000,000 records. Elapsed time: 00:08:42s. Time for last 1,000,000: 2s. Last read position: chr7:100,992,586
INFO 2026-06-08 08:47:20 MarkDuplicates Tracking 1157559 as yet unmatched pairs. 86767 records in RAM.
INFO 2026-06-08 08:47:22 MarkDuplicates Read 210,000,000 records. Elapsed time: 00:08:44s. Time for last 1,000,000: 1s. Last read position: chr7:100,992,859
INFO 2026-06-08 08:47:22 MarkDuplicates Tracking 1155988 as yet unmatched pairs. 85194 records in RAM.
INFO 2026-06-08 08:47:24 MarkDuplicates Read 211,000,000 records. Elapsed time: 00:08:45s. Time for last 1,000,000: 1s. Last read position: chr7:100,993,145
INFO 2026-06-08 08:47:24 MarkDuplicates Tracking 1155722 as yet unmatched pairs. 84926 records in RAM.
INFO 2026-06-08 08:47:26 MarkDuplicates Read 212,000,000 records. Elapsed time: 00:08:47s. Time for last 1,000,000: 1s. Last read position: chr7:100,993,398
INFO 2026-06-08 08:47:26 MarkDuplicates Tracking 1153786 as yet unmatched pairs. 82986 records in RAM.
INFO 2026-06-08 08:47:27 MarkDuplicates Read 213,000,000 records. Elapsed time: 00:08:49s. Time for last 1,000,000: 1s. Last read position: chr7:100,993,631
INFO 2026-06-08 08:47:27 MarkDuplicates Tracking 1153665 as yet unmatched pairs. 82865 records in RAM.
INFO 2026-06-08 08:47:29 MarkDuplicates Read 214,000,000 records. Elapsed time: 00:08:51s. Time for last 1,000,000: 1s. Last read position: chr7:100,993,799
INFO 2026-06-08 08:47:29 MarkDuplicates Tracking 1152408 as yet unmatched pairs. 81603 records in RAM.
INFO 2026-06-08 08:47:31 MarkDuplicates Read 215,000,000 records. Elapsed time: 00:08:52s. Time for last 1,000,000: 1s. Last read position: chr7:100,994,137
INFO 2026-06-08 08:47:31 MarkDuplicates Tracking 1151837 as yet unmatched pairs. 81031 records in RAM.
INFO 2026-06-08 08:47:32 MarkDuplicates Read 216,000,000 records. Elapsed time: 00:08:54s. Time for last 1,000,000: 1s. Last read position: chr7:100,994,225
INFO 2026-06-08 08:47:32 MarkDuplicates Tracking 1152956 as yet unmatched pairs. 82150 records in RAM.
INFO 2026-06-08 08:47:34 MarkDuplicates Read 217,000,000 records. Elapsed time: 00:08:56s. Time for last 1,000,000: 1s. Last read position: chr7:100,994,680
INFO 2026-06-08 08:47:34 MarkDuplicates Tracking 1150910 as yet unmatched pairs. 80102 records in RAM.
INFO 2026-06-08 08:47:35 MarkDuplicates Read 218,000,000 records. Elapsed time: 00:08:57s. Time for last 1,000,000: 1s. Last read position: chr7:100,994,849
INFO 2026-06-08 08:47:35 MarkDuplicates Tracking 1151010 as yet unmatched pairs. 80202 records in RAM.
INFO 2026-06-08 08:47:37 MarkDuplicates Read 219,000,000 records. Elapsed time: 00:08:59s. Time for last 1,000,000: 1s. Last read position: chr7:100,995,017
INFO 2026-06-08 08:47:37 MarkDuplicates Tracking 1150915 as yet unmatched pairs. 80107 records in RAM.
INFO 2026-06-08 08:47:38 MarkDuplicates Read 220,000,000 records. Elapsed time: 00:09:00s. Time for last 1,000,000: 1s. Last read position: chr7:100,995,237
INFO 2026-06-08 08:47:38 MarkDuplicates Tracking 1151116 as yet unmatched pairs. 80308 records in RAM.
INFO 2026-06-08 08:47:40 MarkDuplicates Read 221,000,000 records. Elapsed time: 00:09:02s. Time for last 1,000,000: 1s. Last read position: chr7:100,995,580
INFO 2026-06-08 08:47:40 MarkDuplicates Tracking 1151539 as yet unmatched pairs. 80731 records in RAM.
INFO 2026-06-08 08:47:43 MarkDuplicates Read 222,000,000 records. Elapsed time: 00:09:04s. Time for last 1,000,000: 2s. Last read position: chr7:100,995,785
INFO 2026-06-08 08:47:43 MarkDuplicates Tracking 1150128 as yet unmatched pairs. 79318 records in RAM.
INFO 2026-06-08 08:47:45 MarkDuplicates Read 223,000,000 records. Elapsed time: 00:09:06s. Time for last 1,000,000: 2s. Last read position: chr7:100,996,112
INFO 2026-06-08 08:47:45 MarkDuplicates Tracking 1150146 as yet unmatched pairs. 79336 records in RAM.
INFO 2026-06-08 08:47:47 MarkDuplicates Read 224,000,000 records. Elapsed time: 00:09:08s. Time for last 1,000,000: 1s. Last read position: chr7:100,996,283
INFO 2026-06-08 08:47:47 MarkDuplicates Tracking 1150026 as yet unmatched pairs. 79216 records in RAM.
INFO 2026-06-08 08:47:48 MarkDuplicates Read 225,000,000 records. Elapsed time: 00:09:10s. Time for last 1,000,000: 1s. Last read position: chr7:100,996,365
INFO 2026-06-08 08:47:48 MarkDuplicates Tracking 1156419 as yet unmatched pairs. 85609 records in RAM.
INFO 2026-06-08 08:47:49 MarkDuplicates Read 226,000,000 records. Elapsed time: 00:09:11s. Time for last 1,000,000: 1s. Last read position: chr7:100,996,454
INFO 2026-06-08 08:47:49 MarkDuplicates Tracking 1159166 as yet unmatched pairs. 88356 records in RAM.
INFO 2026-06-08 08:47:51 MarkDuplicates Read 227,000,000 records. Elapsed time: 00:09:13s. Time for last 1,000,000: 2s. Last read position: chr7:100,996,616
INFO 2026-06-08 08:47:51 MarkDuplicates Tracking 1152985 as yet unmatched pairs. 82166 records in RAM.
INFO 2026-06-08 08:47:54 MarkDuplicates Read 228,000,000 records. Elapsed time: 00:09:15s. Time for last 1,000,000: 2s. Last read position: chr7:100,996,715
INFO 2026-06-08 08:47:54 MarkDuplicates Tracking 1154157 as yet unmatched pairs. 83333 records in RAM.
INFO 2026-06-08 08:47:58 MarkDuplicates Read 229,000,000 records. Elapsed time: 00:09:20s. Time for last 1,000,000: 4s. Last read position: chr7:100,996,802
INFO 2026-06-08 08:47:58 MarkDuplicates Tracking 1147038 as yet unmatched pairs. 76212 records in RAM.
INFO 2026-06-08 08:48:01 MarkDuplicates Read 230,000,000 records. Elapsed time: 00:09:22s. Time for last 1,000,000: 2s. Last read position: chr7:100,996,878
INFO 2026-06-08 08:48:01 MarkDuplicates Tracking 1156189 as yet unmatched pairs. 85360 records in RAM.
INFO 2026-06-08 08:48:03 MarkDuplicates Read 231,000,000 records. Elapsed time: 00:09:25s. Time for last 1,000,000: 2s. Last read position: chr7:100,997,043
INFO 2026-06-08 08:48:03 MarkDuplicates Tracking 1144456 as yet unmatched pairs. 73621 records in RAM.
INFO 2026-06-08 08:48:05 MarkDuplicates Read 232,000,000 records. Elapsed time: 00:09:27s. Time for last 1,000,000: 2s. Last read position: chr7:100,997,179
INFO 2026-06-08 08:48:05 MarkDuplicates Tracking 1151550 as yet unmatched pairs. 80712 records in RAM.
INFO 2026-06-08 08:48:07 MarkDuplicates Read 233,000,000 records. Elapsed time: 00:09:29s. Time for last 1,000,000: 2s. Last read position: chr7:100,997,372
INFO 2026-06-08 08:48:07 MarkDuplicates Tracking 1138763 as yet unmatched pairs. 67925 records in RAM.
INFO 2026-06-08 08:48:11 MarkDuplicates Read 234,000,000 records. Elapsed time: 00:09:32s. Time for last 1,000,000: 3s. Last read position: chr7:100,997,437
INFO 2026-06-08 08:48:11 MarkDuplicates Tracking 1146874 as yet unmatched pairs. 76036 records in RAM.
INFO 2026-06-08 08:48:13 MarkDuplicates Read 235,000,000 records. Elapsed time: 00:09:35s. Time for last 1,000,000: 2s. Last read position: chr7:100,997,559
INFO 2026-06-08 08:48:13 MarkDuplicates Tracking 1139097 as yet unmatched pairs. 68256 records in RAM.
INFO 2026-06-08 08:48:16 MarkDuplicates Read 236,000,000 records. Elapsed time: 00:09:37s. Time for last 1,000,000: 2s. Last read position: chr7:100,997,665
INFO 2026-06-08 08:48:16 MarkDuplicates Tracking 1132914 as yet unmatched pairs. 62066 records in RAM.
INFO 2026-06-08 08:48:18 MarkDuplicates Read 237,000,000 records. Elapsed time: 00:09:39s. Time for last 1,000,000: 1s. Last read position: chr7:100,997,856
INFO 2026-06-08 08:48:18 MarkDuplicates Tracking 1130729 as yet unmatched pairs. 59881 records in RAM.
INFO 2026-06-08 08:48:19 MarkDuplicates Read 238,000,000 records. Elapsed time: 00:09:41s. Time for last 1,000,000: 1s. Last read position: chr7:100,998,048
INFO 2026-06-08 08:48:19 MarkDuplicates Tracking 1130135 as yet unmatched pairs. 59286 records in RAM.
INFO 2026-06-08 08:48:21 MarkDuplicates Read 239,000,000 records. Elapsed time: 00:09:43s. Time for last 1,000,000: 1s. Last read position: chr7:100,998,231
INFO 2026-06-08 08:48:21 MarkDuplicates Tracking 1129452 as yet unmatched pairs. 58603 records in RAM.
INFO 2026-06-08 08:48:23 MarkDuplicates Read 240,000,000 records. Elapsed time: 00:09:44s. Time for last 1,000,000: 1s. Last read position: chr7:100,998,335
INFO 2026-06-08 08:48:23 MarkDuplicates Tracking 1129276 as yet unmatched pairs. 58427 records in RAM.
INFO 2026-06-08 08:48:24 MarkDuplicates Read 241,000,000 records. Elapsed time: 00:09:46s. Time for last 1,000,000: 1s. Last read position: chr7:100,998,523
INFO 2026-06-08 08:48:24 MarkDuplicates Tracking 1129258 as yet unmatched pairs. 58409 records in RAM.
INFO 2026-06-08 08:48:26 MarkDuplicates Read 242,000,000 records. Elapsed time: 00:09:47s. Time for last 1,000,000: 1s. Last read position: chr7:100,998,640
INFO 2026-06-08 08:48:26 MarkDuplicates Tracking 1144346 as yet unmatched pairs. 73497 records in RAM.
INFO 2026-06-08 08:48:28 MarkDuplicates Read 243,000,000 records. Elapsed time: 00:09:49s. Time for last 1,000,000: 1s. Last read position: chr7:100,998,750
INFO 2026-06-08 08:48:28 MarkDuplicates Tracking 1141177 as yet unmatched pairs. 70322 records in RAM.
INFO 2026-06-08 08:48:29 MarkDuplicates Read 244,000,000 records. Elapsed time: 00:09:51s. Time for last 1,000,000: 1s. Last read position: chr7:100,998,839
INFO 2026-06-08 08:48:29 MarkDuplicates Tracking 1127675 as yet unmatched pairs. 56820 records in RAM.
INFO 2026-06-08 08:48:31 MarkDuplicates Read 245,000,000 records. Elapsed time: 00:09:53s. Time for last 1,000,000: 1s. Last read position: chr7:100,998,952
INFO 2026-06-08 08:48:31 MarkDuplicates Tracking 1127310 as yet unmatched pairs. 56455 records in RAM.
INFO 2026-06-08 08:48:33 MarkDuplicates Read 246,000,000 records. Elapsed time: 00:09:55s. Time for last 1,000,000: 2s. Last read position: chr7:100,999,053
INFO 2026-06-08 08:48:33 MarkDuplicates Tracking 1128368 as yet unmatched pairs. 57513 records in RAM.
INFO 2026-06-08 08:48:35 MarkDuplicates Read 247,000,000 records. Elapsed time: 00:09:57s. Time for last 1,000,000: 2s. Last read position: chr7:100,999,211
INFO 2026-06-08 08:48:35 MarkDuplicates Tracking 1134273 as yet unmatched pairs. 63416 records in RAM.
INFO 2026-06-08 08:48:38 MarkDuplicates Read 248,000,000 records. Elapsed time: 00:10:00s. Time for last 1,000,000: 2s. Last read position: chr7:100,999,400
INFO 2026-06-08 08:48:38 MarkDuplicates Tracking 1128600 as yet unmatched pairs. 57741 records in RAM.
INFO 2026-06-08 08:48:41 MarkDuplicates Read 249,000,000 records. Elapsed time: 00:10:02s. Time for last 1,000,000: 2s. Last read position: chr7:100,999,565
INFO 2026-06-08 08:48:41 MarkDuplicates Tracking 1126921 as yet unmatched pairs. 56053 records in RAM.
INFO 2026-06-08 08:48:43 MarkDuplicates Read 250,000,000 records. Elapsed time: 00:10:04s. Time for last 1,000,000: 1s. Last read position: chr7:100,999,775
INFO 2026-06-08 08:48:43 MarkDuplicates Tracking 1124710 as yet unmatched pairs. 53841 records in RAM.
INFO 2026-06-08 08:48:44 MarkDuplicates Read 251,000,000 records. Elapsed time: 00:10:06s. Time for last 1,000,000: 1s. Last read position: chr7:100,999,935
INFO 2026-06-08 08:48:44 MarkDuplicates Tracking 1126378 as yet unmatched pairs. 55509 records in RAM.
INFO 2026-06-08 08:48:47 MarkDuplicates Read 252,000,000 records. Elapsed time: 00:10:08s. Time for last 1,000,000: 2s. Last read position: chr7:101,000,147
INFO 2026-06-08 08:48:47 MarkDuplicates Tracking 1122741 as yet unmatched pairs. 51871 records in RAM.
INFO 2026-06-08 08:48:49 MarkDuplicates Read 253,000,000 records. Elapsed time: 00:10:11s. Time for last 1,000,000: 2s. Last read position: chr7:101,000,356
INFO 2026-06-08 08:48:49 MarkDuplicates Tracking 1119984 as yet unmatched pairs. 49108 records in RAM.
INFO 2026-06-08 08:48:51 MarkDuplicates Read 254,000,000 records. Elapsed time: 00:10:13s. Time for last 1,000,000: 1s. Last read position: chr7:101,000,464
INFO 2026-06-08 08:48:51 MarkDuplicates Tracking 1122427 as yet unmatched pairs. 51541 records in RAM.
INFO 2026-06-08 08:48:53 MarkDuplicates Read 255,000,000 records. Elapsed time: 00:10:15s. Time for last 1,000,000: 1s. Last read position: chr7:101,000,668
INFO 2026-06-08 08:48:53 MarkDuplicates Tracking 1122581 as yet unmatched pairs. 51695 records in RAM.
INFO 2026-06-08 08:48:55 MarkDuplicates Read 256,000,000 records. Elapsed time: 00:10:17s. Time for last 1,000,000: 2s. Last read position: chr7:101,000,824
INFO 2026-06-08 08:48:55 MarkDuplicates Tracking 1123698 as yet unmatched pairs. 52810 records in RAM.
INFO 2026-06-08 08:48:57 MarkDuplicates Read 257,000,000 records. Elapsed time: 00:10:19s. Time for last 1,000,000: 1s. Last read position: chr7:101,000,974
INFO 2026-06-08 08:48:57 MarkDuplicates Tracking 1119944 as yet unmatched pairs. 49056 records in RAM.
INFO 2026-06-08 08:48:59 MarkDuplicates Read 258,000,000 records. Elapsed time: 00:10:20s. Time for last 1,000,000: 1s. Last read position: chr7:101,001,059
INFO 2026-06-08 08:48:59 MarkDuplicates Tracking 1114003 as yet unmatched pairs. 43111 records in RAM.
INFO 2026-06-08 08:49:00 MarkDuplicates Read 259,000,000 records. Elapsed time: 00:10:22s. Time for last 1,000,000: 1s. Last read position: chr7:101,001,324
INFO 2026-06-08 08:49:00 MarkDuplicates Tracking 1114043 as yet unmatched pairs. 43144 records in RAM.
INFO 2026-06-08 08:49:02 MarkDuplicates Read 260,000,000 records. Elapsed time: 00:10:23s. Time for last 1,000,000: 1s. Last read position: chr7:101,001,421
INFO 2026-06-08 08:49:02 MarkDuplicates Tracking 1110239 as yet unmatched pairs. 39340 records in RAM.
INFO 2026-06-08 08:49:03 MarkDuplicates Read 261,000,000 records. Elapsed time: 00:10:25s. Time for last 1,000,000: 1s. Last read position: chr7:101,001,486
INFO 2026-06-08 08:49:03 MarkDuplicates Tracking 1110165 as yet unmatched pairs. 39266 records in RAM.
INFO 2026-06-08 08:49:05 MarkDuplicates Read 262,000,000 records. Elapsed time: 00:10:26s. Time for last 1,000,000: 1s. Last read position: chr7:101,001,595
INFO 2026-06-08 08:49:05 MarkDuplicates Tracking 1110113 as yet unmatched pairs. 39214 records in RAM.
INFO 2026-06-08 08:49:06 MarkDuplicates Read 263,000,000 records. Elapsed time: 00:10:28s. Time for last 1,000,000: 1s. Last read position: chr7:101,001,787
INFO 2026-06-08 08:49:06 MarkDuplicates Tracking 1110281 as yet unmatched pairs. 39382 records in RAM.
INFO 2026-06-08 08:49:08 MarkDuplicates Read 264,000,000 records. Elapsed time: 00:10:30s. Time for last 1,000,000: 2s. Last read position: chr7:101,001,910
INFO 2026-06-08 08:49:08 MarkDuplicates Tracking 1110804 as yet unmatched pairs. 39905 records in RAM.
INFO 2026-06-08 08:49:10 MarkDuplicates Read 265,000,000 records. Elapsed time: 00:10:32s. Time for last 1,000,000: 2s. Last read position: chr7:101,002,080
INFO 2026-06-08 08:49:10 MarkDuplicates Tracking 1110246 as yet unmatched pairs. 39347 records in RAM.
INFO 2026-06-08 08:49:12 MarkDuplicates Read 266,000,000 records. Elapsed time: 00:10:34s. Time for last 1,000,000: 2s. Last read position: chr7:101,002,270
INFO 2026-06-08 08:49:12 MarkDuplicates Tracking 1110201 as yet unmatched pairs. 39302 records in RAM.
INFO 2026-06-08 08:49:14 MarkDuplicates Read 267,000,000 records. Elapsed time: 00:10:36s. Time for last 1,000,000: 1s. Last read position: chr7:101,002,572
INFO 2026-06-08 08:49:14 MarkDuplicates Tracking 1109510 as yet unmatched pairs. 38609 records in RAM.
INFO 2026-06-08 08:49:17 MarkDuplicates Read 268,000,000 records. Elapsed time: 00:10:38s. Time for last 1,000,000: 2s. Last read position: chr7:101,002,904
INFO 2026-06-08 08:49:17 MarkDuplicates Tracking 1113613 as yet unmatched pairs. 42710 records in RAM.
INFO 2026-06-08 08:49:19 MarkDuplicates Read 269,000,000 records. Elapsed time: 00:10:41s. Time for last 1,000,000: 2s. Last read position: chr7:101,003,461
INFO 2026-06-08 08:49:19 MarkDuplicates Tracking 1107109 as yet unmatched pairs. 36200 records in RAM.
INFO 2026-06-08 08:49:20 MarkDuplicates Read 270,000,000 records. Elapsed time: 00:10:42s. Time for last 1,000,000: 1s. Last read position: chr7:101,003,891
INFO 2026-06-08 08:49:20 MarkDuplicates Tracking 1106258 as yet unmatched pairs. 35349 records in RAM.
INFO 2026-06-08 08:49:21 MarkDuplicates Read 271,000,000 records. Elapsed time: 00:10:43s. Time for last 1,000,000: 1s. Last read position: chr7:101,004,048
INFO 2026-06-08 08:49:21 MarkDuplicates Tracking 1106195 as yet unmatched pairs. 35286 records in RAM.
INFO 2026-06-08 08:49:23 MarkDuplicates Read 272,000,000 records. Elapsed time: 00:10:44s. Time for last 1,000,000: 1s. Last read position: chr7:101,004,496
INFO 2026-06-08 08:49:23 MarkDuplicates Tracking 1106008 as yet unmatched pairs. 35099 records in RAM.
INFO 2026-06-08 08:49:24 MarkDuplicates Read 273,000,000 records. Elapsed time: 00:10:46s. Time for last 1,000,000: 1s. Last read position: chr7:102,201,818
INFO 2026-06-08 08:49:24 MarkDuplicates Tracking 1102752 as yet unmatched pairs. 31834 records in RAM.
INFO 2026-06-08 08:49:26 MarkDuplicates Read 274,000,000 records. Elapsed time: 00:10:48s. Time for last 1,000,000: 1s. Last read position: chr7:102,558,476
INFO 2026-06-08 08:49:26 MarkDuplicates Tracking 1101322 as yet unmatched pairs. 30395 records in RAM.
INFO 2026-06-08 08:49:28 MarkDuplicates Read 275,000,000 records. Elapsed time: 00:10:49s. Time for last 1,000,000: 1s. Last read position: chr7:105,105,876
INFO 2026-06-08 08:49:28 MarkDuplicates Tracking 1100060 as yet unmatched pairs. 29126 records in RAM.
INFO 2026-06-08 08:49:29 MarkDuplicates Read 276,000,000 records. Elapsed time: 00:10:51s. Time for last 1,000,000: 1s. Last read position: chr7:116,699,080
INFO 2026-06-08 08:49:29 MarkDuplicates Tracking 1099379 as yet unmatched pairs. 28422 records in RAM.
INFO 2026-06-08 08:49:31 MarkDuplicates Read 277,000,000 records. Elapsed time: 00:10:53s. Time for last 1,000,000: 1s. Last read position: chr7:123,692,658
INFO 2026-06-08 08:49:31 MarkDuplicates Tracking 1095450 as yet unmatched pairs. 24478 records in RAM.
INFO 2026-06-08 08:49:34 MarkDuplicates Read 278,000,000 records. Elapsed time: 00:10:56s. Time for last 1,000,000: 2s. Last read position: chr7:128,081,385
INFO 2026-06-08 08:49:34 MarkDuplicates Tracking 1093306 as yet unmatched pairs. 22319 records in RAM.
INFO 2026-06-08 08:49:37 MarkDuplicates Read 279,000,000 records. Elapsed time: 00:10:58s. Time for last 1,000,000: 2s. Last read position: chr7:129,948,866
INFO 2026-06-08 08:49:37 MarkDuplicates Tracking 1090145 as yet unmatched pairs. 19141 records in RAM.
INFO 2026-06-08 08:49:39 MarkDuplicates Read 280,000,000 records. Elapsed time: 00:11:01s. Time for last 1,000,000: 2s. Last read position: chr7:137,908,281
INFO 2026-06-08 08:49:39 MarkDuplicates Tracking 1088271 as yet unmatched pairs. 17248 records in RAM.
INFO 2026-06-08 08:49:42 MarkDuplicates Read 281,000,000 records. Elapsed time: 00:11:03s. Time for last 1,000,000: 2s. Last read position: chr7:139,575,245
INFO 2026-06-08 08:49:42 MarkDuplicates Tracking 1085177 as yet unmatched pairs. 14144 records in RAM.
INFO 2026-06-08 08:49:46 MarkDuplicates Read 282,000,000 records. Elapsed time: 00:11:07s. Time for last 1,000,000: 3s. Last read position: chr7:143,264,524
INFO 2026-06-08 08:49:46 MarkDuplicates Tracking 1082851 as yet unmatched pairs. 11808 records in RAM.
INFO 2026-06-08 08:49:48 MarkDuplicates Read 283,000,000 records. Elapsed time: 00:11:10s. Time for last 1,000,000: 2s. Last read position: chr7:144,318,158
INFO 2026-06-08 08:49:48 MarkDuplicates Tracking 1080630 as yet unmatched pairs. 9579 records in RAM.
INFO 2026-06-08 08:49:50 MarkDuplicates Read 284,000,000 records. Elapsed time: 00:11:12s. Time for last 1,000,000: 2s. Last read position: chr7:150,369,760
INFO 2026-06-08 08:49:50 MarkDuplicates Tracking 1078650 as yet unmatched pairs. 7579 records in RAM.
INFO 2026-06-08 08:49:52 MarkDuplicates Read 285,000,000 records. Elapsed time: 00:11:14s. Time for last 1,000,000: 1s. Last read position: chr7:151,086,861
INFO 2026-06-08 08:49:52 MarkDuplicates Tracking 1075238 as yet unmatched pairs. 4158 records in RAM.
INFO 2026-06-08 08:49:54 MarkDuplicates Read 286,000,000 records. Elapsed time: 00:11:16s. Time for last 1,000,000: 1s. Last read position: chr7:155,763,855
INFO 2026-06-08 08:49:54 MarkDuplicates Tracking 1072842 as yet unmatched pairs. 1750 records in RAM.
INFO 2026-06-08 08:49:57 MarkDuplicates Read 287,000,000 records. Elapsed time: 00:11:19s. Time for last 1,000,000: 2s. Last read position: chr8:9,735,422
INFO 2026-06-08 08:49:57 MarkDuplicates Tracking 1069809 as yet unmatched pairs. 71228 records in RAM.
INFO 2026-06-08 08:49:59 MarkDuplicates Read 288,000,000 records. Elapsed time: 00:11:21s. Time for last 1,000,000: 2s. Last read position: chr8:22,069,462
INFO 2026-06-08 08:49:59 MarkDuplicates Tracking 1067243 as yet unmatched pairs. 68650 records in RAM.
INFO 2026-06-08 08:50:01 MarkDuplicates Read 289,000,000 records. Elapsed time: 00:11:23s. Time for last 1,000,000: 2s. Last read position: chr8:23,017,391
INFO 2026-06-08 08:50:01 MarkDuplicates Tracking 1064225 as yet unmatched pairs. 65625 records in RAM.
INFO 2026-06-08 08:50:03 MarkDuplicates Read 290,000,000 records. Elapsed time: 00:11:25s. Time for last 1,000,000: 1s. Last read position: chr8:29,146,449
INFO 2026-06-08 08:50:03 MarkDuplicates Tracking 1061460 as yet unmatched pairs. 62842 records in RAM.
INFO 2026-06-08 08:51:44 MarkDuplicates Read 291,000,000 records. Elapsed time: 00:13:06s. Time for last 1,000,000: 100s. Last read position: chr8:37,697,836
INFO 2026-06-08 08:51:44 MarkDuplicates Tracking 1062215 as yet unmatched pairs. 63578 records in RAM.
INFO 2026-06-08 08:51:47 MarkDuplicates Read 292,000,000 records. Elapsed time: 00:13:09s. Time for last 1,000,000: 2s. Last read position: chr8:38,329,527
INFO 2026-06-08 08:51:47 MarkDuplicates Tracking 1054981 as yet unmatched pairs. 56332 records in RAM.
INFO 2026-06-08 08:51:49 MarkDuplicates Read 293,000,000 records. Elapsed time: 00:13:11s. Time for last 1,000,000: 2s. Last read position: chr8:42,288,590
INFO 2026-06-08 08:51:49 MarkDuplicates Tracking 1052479 as yet unmatched pairs. 53816 records in RAM.
INFO 2026-06-08 08:51:52 MarkDuplicates Read 294,000,000 records. Elapsed time: 00:13:14s. Time for last 1,000,000: 2s. Last read position: chr8:56,073,190
INFO 2026-06-08 08:51:52 MarkDuplicates Tracking 1051762 as yet unmatched pairs. 53085 records in RAM.
INFO 2026-06-08 08:51:54 MarkDuplicates Read 295,000,000 records. Elapsed time: 00:13:16s. Time for last 1,000,000: 2s. Last read position: chr8:69,603,634
INFO 2026-06-08 08:51:54 MarkDuplicates Tracking 1047467 as yet unmatched pairs. 48777 records in RAM.
INFO 2026-06-08 08:51:57 MarkDuplicates Read 296,000,000 records. Elapsed time: 00:13:19s. Time for last 1,000,000: 2s. Last read position: chr8:81,478,867
INFO 2026-06-08 08:51:57 MarkDuplicates Tracking 1045222 as yet unmatched pairs. 46515 records in RAM.
INFO 2026-06-08 08:52:00 MarkDuplicates Read 297,000,000 records. Elapsed time: 00:13:21s. Time for last 1,000,000: 2s. Last read position: chr8:97,690,975
INFO 2026-06-08 08:52:00 MarkDuplicates Tracking 1043007 as yet unmatched pairs. 44288 records in RAM.
INFO 2026-06-08 08:52:02 MarkDuplicates Read 298,000,000 records. Elapsed time: 00:13:24s. Time for last 1,000,000: 2s. Last read position: chr8:100,717,833
INFO 2026-06-08 08:52:02 MarkDuplicates Tracking 1041182 as yet unmatched pairs. 42448 records in RAM.
INFO 2026-06-08 08:52:05 MarkDuplicates Read 299,000,000 records. Elapsed time: 00:13:26s. Time for last 1,000,000: 2s. Last read position: chr8:109,334,392
INFO 2026-06-08 08:52:05 MarkDuplicates Tracking 1037911 as yet unmatched pairs. 39162 records in RAM.
INFO 2026-06-08 08:52:07 MarkDuplicates Read 300,000,000 records. Elapsed time: 00:13:29s. Time for last 1,000,000: 2s. Last read position: chr8:125,433,500
INFO 2026-06-08 08:52:07 MarkDuplicates Tracking 1035304 as yet unmatched pairs. 36535 records in RAM.
INFO 2026-06-08 08:52:10 MarkDuplicates Read 301,000,000 records. Elapsed time: 00:13:32s. Time for last 1,000,000: 2s. Last read position: chr8:127,738,892
INFO 2026-06-08 08:52:10 MarkDuplicates Tracking 1032943 as yet unmatched pairs. 34160 records in RAM.
INFO 2026-06-08 08:52:13 MarkDuplicates Read 302,000,000 records. Elapsed time: 00:13:34s. Time for last 1,000,000: 2s. Last read position: chr8:140,549,282
INFO 2026-06-08 08:52:13 MarkDuplicates Tracking 1029418 as yet unmatched pairs. 30617 records in RAM.
INFO 2026-06-08 08:52:15 MarkDuplicates Read 303,000,000 records. Elapsed time: 00:13:37s. Time for last 1,000,000: 2s. Last read position: chr8:143,589,443
INFO 2026-06-08 08:52:15 MarkDuplicates Tracking 1026525 as yet unmatched pairs. 27710 records in RAM.
INFO 2026-06-08 08:52:18 MarkDuplicates Read 304,000,000 records. Elapsed time: 00:13:39s. Time for last 1,000,000: 2s. Last read position: chr8:143,858,188
INFO 2026-06-08 08:52:18 MarkDuplicates Tracking 1023505 as yet unmatched pairs. 24686 records in RAM.
INFO 2026-06-08 08:52:19 MarkDuplicates Read 305,000,000 records. Elapsed time: 00:13:41s. Time for last 1,000,000: 1s. Last read position: chr8:143,859,127
INFO 2026-06-08 08:52:19 MarkDuplicates Tracking 1023754 as yet unmatched pairs. 24935 records in RAM.
INFO 2026-06-08 08:52:20 MarkDuplicates Read 306,000,000 records. Elapsed time: 00:13:42s. Time for last 1,000,000: 1s. Last read position: chr8:143,860,440
INFO 2026-06-08 08:52:20 MarkDuplicates Tracking 1022161 as yet unmatched pairs. 23340 records in RAM.
INFO 2026-06-08 08:52:22 MarkDuplicates Read 307,000,000 records. Elapsed time: 00:13:43s. Time for last 1,000,000: 1s. Last read position: chr8:143,861,502
INFO 2026-06-08 08:52:22 MarkDuplicates Tracking 1021358 as yet unmatched pairs. 22537 records in RAM.
INFO 2026-06-08 08:52:23 MarkDuplicates Read 308,000,000 records. Elapsed time: 00:13:45s. Time for last 1,000,000: 1s. Last read position: chr8:143,862,639
INFO 2026-06-08 08:52:23 MarkDuplicates Tracking 1023103 as yet unmatched pairs. 24281 records in RAM.
INFO 2026-06-08 08:52:25 MarkDuplicates Read 309,000,000 records. Elapsed time: 00:13:46s. Time for last 1,000,000: 1s. Last read position: chr8:143,863,527
INFO 2026-06-08 08:52:25 MarkDuplicates Tracking 1018843 as yet unmatched pairs. 20014 records in RAM.
INFO 2026-06-08 08:52:26 MarkDuplicates Read 310,000,000 records. Elapsed time: 00:13:48s. Time for last 1,000,000: 1s. Last read position: chr8:143,864,709
INFO 2026-06-08 08:52:26 MarkDuplicates Tracking 1020531 as yet unmatched pairs. 21700 records in RAM.
INFO 2026-06-08 08:52:27 MarkDuplicates Read 311,000,000 records. Elapsed time: 00:13:49s. Time for last 1,000,000: 1s. Last read position: chr8:143,866,071
INFO 2026-06-08 08:52:27 MarkDuplicates Tracking 1016697 as yet unmatched pairs. 17862 records in RAM.
INFO 2026-06-08 08:52:28 MarkDuplicates Read 312,000,000 records. Elapsed time: 00:13:50s. Time for last 1,000,000: 1s. Last read position: chr8:143,868,161
INFO 2026-06-08 08:52:28 MarkDuplicates Tracking 1016482 as yet unmatched pairs. 17646 records in RAM.
INFO 2026-06-08 08:52:31 MarkDuplicates Read 313,000,000 records. Elapsed time: 00:13:52s. Time for last 1,000,000: 2s. Last read position: chr8:143,919,511
INFO 2026-06-08 08:52:31 MarkDuplicates Tracking 1013571 as yet unmatched pairs. 14724 records in RAM.
INFO 2026-06-08 08:52:33 MarkDuplicates Read 314,000,000 records. Elapsed time: 00:13:55s. Time for last 1,000,000: 2s. Last read position: chr8:143,930,181
INFO 2026-06-08 08:52:33 MarkDuplicates Tracking 1009291 as yet unmatched pairs. 10439 records in RAM.
INFO 2026-06-08 08:52:35 MarkDuplicates Read 315,000,000 records. Elapsed time: 00:13:57s. Time for last 1,000,000: 1s. Last read position: chr8:144,255,622
INFO 2026-06-08 08:52:35 MarkDuplicates Tracking 1005543 as yet unmatched pairs. 6669 records in RAM.
INFO 2026-06-08 08:52:37 MarkDuplicates Read 316,000,000 records. Elapsed time: 00:13:59s. Time for last 1,000,000: 1s. Last read position: chr8:144,423,901
INFO 2026-06-08 08:52:37 MarkDuplicates Tracking 1002339 as yet unmatched pairs. 3452 records in RAM.
INFO 2026-06-08 08:52:39 MarkDuplicates Read 317,000,000 records. Elapsed time: 00:14:01s. Time for last 1,000,000: 2s. Last read position: chr9:17,358
INFO 2026-06-08 08:52:39 MarkDuplicates Tracking 998890 as yet unmatched pairs. 59959 records in RAM.
INFO 2026-06-08 08:52:41 MarkDuplicates Read 318,000,000 records. Elapsed time: 00:14:03s. Time for last 1,000,000: 1s. Last read position: chr9:13,247,635
INFO 2026-06-08 08:52:41 MarkDuplicates Tracking 996510 as yet unmatched pairs. 57551 records in RAM.
INFO 2026-06-08 08:52:43 MarkDuplicates Read 319,000,000 records. Elapsed time: 00:14:05s. Time for last 1,000,000: 1s. Last read position: chr9:32,633,426
INFO 2026-06-08 08:52:43 MarkDuplicates Tracking 994114 as yet unmatched pairs. 55133 records in RAM.
INFO 2026-06-08 08:52:45 MarkDuplicates Read 320,000,000 records. Elapsed time: 00:14:07s. Time for last 1,000,000: 1s. Last read position: chr9:35,095,085
INFO 2026-06-08 08:52:45 MarkDuplicates Tracking 991426 as yet unmatched pairs. 52428 records in RAM.
INFO 2026-06-08 08:52:48 MarkDuplicates Read 321,000,000 records. Elapsed time: 00:14:09s. Time for last 1,000,000: 2s. Last read position: chr9:35,842,493
INFO 2026-06-08 08:52:48 MarkDuplicates Tracking 988523 as yet unmatched pairs. 49517 records in RAM.
INFO 2026-06-08 08:52:50 MarkDuplicates Read 322,000,000 records. Elapsed time: 00:14:11s. Time for last 1,000,000: 1s. Last read position: chr9:69,227,979
INFO 2026-06-08 08:52:50 MarkDuplicates Tracking 986593 as yet unmatched pairs. 47501 records in RAM.
INFO 2026-06-08 08:52:52 MarkDuplicates Read 323,000,000 records. Elapsed time: 00:14:13s. Time for last 1,000,000: 2s. Last read position: chr9:86,027,818
INFO 2026-06-08 08:52:52 MarkDuplicates Tracking 984137 as yet unmatched pairs. 45038 records in RAM.
INFO 2026-06-08 08:52:53 MarkDuplicates Read 324,000,000 records. Elapsed time: 00:14:15s. Time for last 1,000,000: 1s. Last read position: chr9:93,259,372
INFO 2026-06-08 08:52:53 MarkDuplicates Tracking 981231 as yet unmatched pairs. 42112 records in RAM.
INFO 2026-06-08 08:52:55 MarkDuplicates Read 325,000,000 records. Elapsed time: 00:14:17s. Time for last 1,000,000: 1s. Last read position: chr9:95,506,407
INFO 2026-06-08 08:52:55 MarkDuplicates Tracking 978612 as yet unmatched pairs. 39482 records in RAM.
INFO 2026-06-08 08:52:57 MarkDuplicates Read 326,000,000 records. Elapsed time: 00:14:19s. Time for last 1,000,000: 1s. Last read position: chr9:105,244,856
INFO 2026-06-08 08:52:57 MarkDuplicates Tracking 976036 as yet unmatched pairs. 36901 records in RAM.
INFO 2026-06-08 08:52:59 MarkDuplicates Read 327,000,000 records. Elapsed time: 00:14:21s. Time for last 1,000,000: 2s. Last read position: chr9:112,297,866
INFO 2026-06-08 08:52:59 MarkDuplicates Tracking 973510 as yet unmatched pairs. 34363 records in RAM.
INFO 2026-06-08 08:53:01 MarkDuplicates Read 328,000,000 records. Elapsed time: 00:14:23s. Time for last 1,000,000: 2s. Last read position: chr9:115,073,623
INFO 2026-06-08 08:53:01 MarkDuplicates Tracking 970651 as yet unmatched pairs. 31486 records in RAM.
INFO 2026-06-08 08:53:03 MarkDuplicates Read 329,000,000 records. Elapsed time: 00:14:24s. Time for last 1,000,000: 1s. Last read position: chr9:124,051,774
INFO 2026-06-08 08:53:03 MarkDuplicates Tracking 967951 as yet unmatched pairs. 28764 records in RAM.
INFO 2026-06-08 08:53:05 MarkDuplicates Read 330,000,000 records. Elapsed time: 00:14:27s. Time for last 1,000,000: 2s. Last read position: chr9:127,661,102
INFO 2026-06-08 08:53:05 MarkDuplicates Tracking 965244 as yet unmatched pairs. 26038 records in RAM.
INFO 2026-06-08 08:53:08 MarkDuplicates Read 331,000,000 records. Elapsed time: 00:14:29s. Time for last 1,000,000: 2s. Last read position: chr9:128,473,642
INFO 2026-06-08 08:53:08 MarkDuplicates Tracking 962287 as yet unmatched pairs. 23076 records in RAM.
INFO 2026-06-08 08:53:09 MarkDuplicates Read 332,000,000 records. Elapsed time: 00:14:31s. Time for last 1,000,000: 1s. Last read position: chr9:129,635,319
INFO 2026-06-08 08:53:09 MarkDuplicates Tracking 959539 as yet unmatched pairs. 20310 records in RAM.
INFO 2026-06-08 08:53:12 MarkDuplicates Read 333,000,000 records. Elapsed time: 00:14:33s. Time for last 1,000,000: 2s. Last read position: chr9:131,164,060
INFO 2026-06-08 08:53:12 MarkDuplicates Tracking 956777 as yet unmatched pairs. 17537 records in RAM.
INFO 2026-06-08 08:53:14 MarkDuplicates Read 334,000,000 records. Elapsed time: 00:14:35s. Time for last 1,000,000: 2s. Last read position: chr9:133,071,314
INFO 2026-06-08 08:53:14 MarkDuplicates Tracking 954126 as yet unmatched pairs. 14869 records in RAM.
INFO 2026-06-08 08:53:16 MarkDuplicates Read 335,000,000 records. Elapsed time: 00:14:38s. Time for last 1,000,000: 2s. Last read position: chr9:134,401,646
INFO 2026-06-08 08:53:16 MarkDuplicates Tracking 951673 as yet unmatched pairs. 12404 records in RAM.
INFO 2026-06-08 08:53:18 MarkDuplicates Read 336,000,000 records. Elapsed time: 00:14:40s. Time for last 1,000,000: 2s. Last read position: chr9:136,448,307
INFO 2026-06-08 08:53:18 MarkDuplicates Tracking 948441 as yet unmatched pairs. 9152 records in RAM.
INFO 2026-06-08 08:53:21 MarkDuplicates Read 337,000,000 records. Elapsed time: 00:14:42s. Time for last 1,000,000: 2s. Last read position: chr9:136,823,609
INFO 2026-06-08 08:53:21 MarkDuplicates Tracking 945216 as yet unmatched pairs. 5921 records in RAM.
INFO 2026-06-08 08:53:23 MarkDuplicates Read 338,000,000 records. Elapsed time: 00:14:45s. Time for last 1,000,000: 2s. Last read position: chr9:137,199,631
INFO 2026-06-08 08:53:23 MarkDuplicates Tracking 942181 as yet unmatched pairs. 2875 records in RAM.
INFO 2026-06-08 08:53:26 MarkDuplicates Read 339,000,000 records. Elapsed time: 00:14:48s. Time for last 1,000,000: 2s. Last read position: chr10:3,105,373
INFO 2026-06-08 08:53:26 MarkDuplicates Tracking 938974 as yet unmatched pairs. 42285 records in RAM.
INFO 2026-06-08 08:53:28 MarkDuplicates Read 340,000,000 records. Elapsed time: 00:14:50s. Time for last 1,000,000: 2s. Last read position: chr10:16,752,622
INFO 2026-06-08 08:53:28 MarkDuplicates Tracking 936186 as yet unmatched pairs. 39483 records in RAM.
INFO 2026-06-08 08:53:31 MarkDuplicates Read 341,000,000 records. Elapsed time: 00:14:52s. Time for last 1,000,000: 2s. Last read position: chr10:28,610,732
INFO 2026-06-08 08:53:31 MarkDuplicates Tracking 933770 as yet unmatched pairs. 37048 records in RAM.
INFO 2026-06-08 08:53:33 MarkDuplicates Read 342,000,000 records. Elapsed time: 00:14:55s. Time for last 1,000,000: 2s. Last read position: chr10:32,032,757
INFO 2026-06-08 08:53:33 MarkDuplicates Tracking 931719 as yet unmatched pairs. 34985 records in RAM.
INFO 2026-06-08 08:53:36 MarkDuplicates Read 343,000,000 records. Elapsed time: 00:14:57s. Time for last 1,000,000: 2s. Last read position: chr10:45,700,023
INFO 2026-06-08 08:53:36 MarkDuplicates Tracking 928924 as yet unmatched pairs. 32180 records in RAM.
INFO 2026-06-08 08:53:38 MarkDuplicates Read 344,000,000 records. Elapsed time: 00:14:59s. Time for last 1,000,000: 2s. Last read position: chr10:50,099,977
INFO 2026-06-08 08:53:38 MarkDuplicates Tracking 927309 as yet unmatched pairs. 30557 records in RAM.
INFO 2026-06-08 08:53:40 MarkDuplicates Read 345,000,000 records. Elapsed time: 00:15:01s. Time for last 1,000,000: 1s. Last read position: chr10:68,749,149
INFO 2026-06-08 08:53:40 MarkDuplicates Tracking 924859 as yet unmatched pairs. 28089 records in RAM.
INFO 2026-06-08 08:53:42 MarkDuplicates Read 346,000,000 records. Elapsed time: 00:15:03s. Time for last 1,000,000: 1s. Last read position: chr10:73,773,593
INFO 2026-06-08 08:53:42 MarkDuplicates Tracking 922244 as yet unmatched pairs. 25464 records in RAM.
INFO 2026-06-08 08:53:44 MarkDuplicates Read 347,000,000 records. Elapsed time: 00:15:05s. Time for last 1,000,000: 2s. Last read position: chr10:79,298,479
INFO 2026-06-08 08:53:44 MarkDuplicates Tracking 919526 as yet unmatched pairs. 22732 records in RAM.
INFO 2026-06-08 08:53:46 MarkDuplicates Read 348,000,000 records. Elapsed time: 00:15:07s. Time for last 1,000,000: 2s. Last read position: chr10:87,864,365
INFO 2026-06-08 08:53:46 MarkDuplicates Tracking 917193 as yet unmatched pairs. 20390 records in RAM.
INFO 2026-06-08 08:53:48 MarkDuplicates Read 349,000,000 records. Elapsed time: 00:15:10s. Time for last 1,000,000: 2s. Last read position: chr10:95,632,958
INFO 2026-06-08 08:53:48 MarkDuplicates Tracking 914613 as yet unmatched pairs. 17794 records in RAM.
INFO 2026-06-08 08:53:51 MarkDuplicates Read 350,000,000 records. Elapsed time: 00:15:12s. Time for last 1,000,000: 2s. Last read position: chr10:99,929,749
INFO 2026-06-08 08:53:51 MarkDuplicates Tracking 911859 as yet unmatched pairs. 15024 records in RAM.
INFO 2026-06-08 08:53:53 MarkDuplicates Read 351,000,000 records. Elapsed time: 00:15:15s. Time for last 1,000,000: 2s. Last read position: chr10:102,160,961
INFO 2026-06-08 08:53:53 MarkDuplicates Tracking 909215 as yet unmatched pairs. 12368 records in RAM.
INFO 2026-06-08 08:53:56 MarkDuplicates Read 352,000,000 records. Elapsed time: 00:15:18s. Time for last 1,000,000: 3s. Last read position: chr10:104,055,951
INFO 2026-06-08 08:53:56 MarkDuplicates Tracking 906754 as yet unmatched pairs. 9901 records in RAM.
INFO 2026-06-08 08:54:00 MarkDuplicates Read 353,000,000 records. Elapsed time: 00:15:22s. Time for last 1,000,000: 3s. Last read position: chr10:114,127,528
INFO 2026-06-08 08:54:00 MarkDuplicates Tracking 903943 as yet unmatched pairs. 7069 records in RAM.
INFO 2026-06-08 08:54:03 MarkDuplicates Read 354,000,000 records. Elapsed time: 00:15:24s. Time for last 1,000,000: 2s. Last read position: chr10:120,354,832
INFO 2026-06-08 08:54:03 MarkDuplicates Tracking 901473 as yet unmatched pairs. 4584 records in RAM.
INFO 2026-06-08 08:54:05 MarkDuplicates Read 355,000,000 records. Elapsed time: 00:15:26s. Time for last 1,000,000: 2s. Last read position: chr10:127,878,164
INFO 2026-06-08 08:54:05 MarkDuplicates Tracking 898935 as yet unmatched pairs. 2033 records in RAM.
INFO 2026-06-08 08:54:07 MarkDuplicates Read 356,000,000 records. Elapsed time: 00:15:29s. Time for last 1,000,000: 2s. Last read position: chr11:308,174
INFO 2026-06-08 08:54:07 MarkDuplicates Tracking 896345 as yet unmatched pairs. 95264 records in RAM.
INFO 2026-06-08 08:54:10 MarkDuplicates Read 357,000,000 records. Elapsed time: 00:15:31s. Time for last 1,000,000: 2s. Last read position: chr11:403,701
INFO 2026-06-08 08:54:10 MarkDuplicates Tracking 893772 as yet unmatched pairs. 92683 records in RAM.
INFO 2026-06-08 08:54:13 MarkDuplicates Read 358,000,000 records. Elapsed time: 00:15:34s. Time for last 1,000,000: 3s. Last read position: chr11:702,931
INFO 2026-06-08 08:54:13 MarkDuplicates Tracking 890558 as yet unmatched pairs. 89459 records in RAM.
INFO 2026-06-08 08:54:17 MarkDuplicates Read 359,000,000 records. Elapsed time: 00:15:38s. Time for last 1,000,000: 4s. Last read position: chr11:1,092,852
INFO 2026-06-08 08:54:17 MarkDuplicates Tracking 887410 as yet unmatched pairs. 86297 records in RAM.
INFO 2026-06-08 08:54:19 MarkDuplicates Read 360,000,000 records. Elapsed time: 00:15:40s. Time for last 1,000,000: 1s. Last read position: chr11:1,249,195
INFO 2026-06-08 08:54:19 MarkDuplicates Tracking 886062 as yet unmatched pairs. 84947 records in RAM.
INFO 2026-06-08 08:54:21 MarkDuplicates Read 361,000,000 records. Elapsed time: 00:15:42s. Time for last 1,000,000: 1s. Last read position: chr11:2,395,932
INFO 2026-06-08 08:54:21 MarkDuplicates Tracking 883443 as yet unmatched pairs. 82317 records in RAM.
INFO 2026-06-08 08:54:23 MarkDuplicates Read 362,000,000 records. Elapsed time: 00:15:45s. Time for last 1,000,000: 2s. Last read position: chr11:6,608,760
INFO 2026-06-08 08:54:23 MarkDuplicates Tracking 880031 as yet unmatched pairs. 78895 records in RAM.
INFO 2026-06-08 08:54:26 MarkDuplicates Read 363,000,000 records. Elapsed time: 00:15:47s. Time for last 1,000,000: 2s. Last read position: chr11:10,042,911
INFO 2026-06-08 08:54:26 MarkDuplicates Tracking 877038 as yet unmatched pairs. 75896 records in RAM.
INFO 2026-06-08 08:54:30 MarkDuplicates Read 364,000,000 records. Elapsed time: 00:15:51s. Time for last 1,000,000: 4s. Last read position: chr11:16,974,737
INFO 2026-06-08 08:54:30 MarkDuplicates Tracking 875318 as yet unmatched pairs. 74159 records in RAM.
INFO 2026-06-08 08:54:32 MarkDuplicates Read 365,000,000 records. Elapsed time: 00:15:54s. Time for last 1,000,000: 2s. Last read position: chr11:33,353,236
INFO 2026-06-08 08:54:32 MarkDuplicates Tracking 872090 as yet unmatched pairs. 70916 records in RAM.
INFO 2026-06-08 08:54:34 MarkDuplicates Read 366,000,000 records. Elapsed time: 00:15:56s. Time for last 1,000,000: 2s. Last read position: chr11:45,862,064
INFO 2026-06-08 08:54:34 MarkDuplicates Tracking 869432 as yet unmatched pairs. 68245 records in RAM.
INFO 2026-06-08 08:54:37 MarkDuplicates Read 367,000,000 records. Elapsed time: 00:15:58s. Time for last 1,000,000: 2s. Last read position: chr11:47,179,442
INFO 2026-06-08 08:54:37 MarkDuplicates Tracking 866666 as yet unmatched pairs. 65471 records in RAM.
INFO 2026-06-08 08:54:40 MarkDuplicates Read 368,000,000 records. Elapsed time: 00:16:02s. Time for last 1,000,000: 3s. Last read position: chr11:57,653,441
INFO 2026-06-08 08:54:40 MarkDuplicates Tracking 864027 as yet unmatched pairs. 62826 records in RAM.
INFO 2026-06-08 08:54:43 MarkDuplicates Read 369,000,000 records. Elapsed time: 00:16:05s. Time for last 1,000,000: 2s. Last read position: chr11:60,941,265
INFO 2026-06-08 08:54:43 MarkDuplicates Tracking 861327 as yet unmatched pairs. 60118 records in RAM.
INFO 2026-06-08 08:54:46 MarkDuplicates Read 370,000,000 records. Elapsed time: 00:16:07s. Time for last 1,000,000: 2s. Last read position: chr11:62,520,220
INFO 2026-06-08 08:54:46 MarkDuplicates Tracking 858912 as yet unmatched pairs. 57647 records in RAM.
INFO 2026-06-08 08:54:48 MarkDuplicates Read 371,000,000 records. Elapsed time: 00:16:09s. Time for last 1,000,000: 2s. Last read position: chr11:62,533,974
INFO 2026-06-08 08:54:48 MarkDuplicates Tracking 857439 as yet unmatched pairs. 56172 records in RAM.
INFO 2026-06-08 08:54:50 MarkDuplicates Read 372,000,000 records. Elapsed time: 00:16:12s. Time for last 1,000,000: 2s. Last read position: chr11:62,794,337
INFO 2026-06-08 08:54:50 MarkDuplicates Tracking 854100 as yet unmatched pairs. 52826 records in RAM.
INFO 2026-06-08 08:54:53 MarkDuplicates Read 373,000,000 records. Elapsed time: 00:16:14s. Time for last 1,000,000: 2s. Last read position: chr11:64,246,490
INFO 2026-06-08 08:54:53 MarkDuplicates Tracking 850931 as yet unmatched pairs. 49650 records in RAM.
INFO 2026-06-08 08:54:55 MarkDuplicates Read 374,000,000 records. Elapsed time: 00:16:16s. Time for last 1,000,000: 2s. Last read position: chr11:64,776,516
INFO 2026-06-08 08:54:55 MarkDuplicates Tracking 848180 as yet unmatched pairs. 46882 records in RAM.
INFO 2026-06-08 08:54:57 MarkDuplicates Read 375,000,000 records. Elapsed time: 00:16:18s. Time for last 1,000,000: 1s. Last read position: chr11:65,188,478
INFO 2026-06-08 08:54:57 MarkDuplicates Tracking 844719 as yet unmatched pairs. 43409 records in RAM.
INFO 2026-06-08 08:54:59 MarkDuplicates Read 376,000,000 records. Elapsed time: 00:16:20s. Time for last 1,000,000: 1s. Last read position: chr11:65,645,854
INFO 2026-06-08 08:54:59 MarkDuplicates Tracking 841518 as yet unmatched pairs. 40178 records in RAM.
INFO 2026-06-08 08:55:01 MarkDuplicates Read 377,000,000 records. Elapsed time: 00:16:22s. Time for last 1,000,000: 1s. Last read position: chr11:66,003,689
INFO 2026-06-08 08:55:01 MarkDuplicates Tracking 838625 as yet unmatched pairs. 37282 records in RAM.
INFO 2026-06-08 08:55:03 MarkDuplicates Read 378,000,000 records. Elapsed time: 00:16:25s. Time for last 1,000,000: 2s. Last read position: chr11:66,857,896
INFO 2026-06-08 08:55:03 MarkDuplicates Tracking 835663 as yet unmatched pairs. 34312 records in RAM.
INFO 2026-06-08 08:55:05 MarkDuplicates Read 379,000,000 records. Elapsed time: 00:16:27s. Time for last 1,000,000: 1s. Last read position: chr11:67,610,494
INFO 2026-06-08 08:55:05 MarkDuplicates Tracking 832549 as yet unmatched pairs. 31178 records in RAM.
INFO 2026-06-08 08:55:07 MarkDuplicates Read 380,000,000 records. Elapsed time: 00:16:29s. Time for last 1,000,000: 1s. Last read position: chr11:68,936,745
INFO 2026-06-08 08:55:07 MarkDuplicates Tracking 830094 as yet unmatched pairs. 28718 records in RAM.
INFO 2026-06-08 08:55:09 MarkDuplicates Read 381,000,000 records. Elapsed time: 00:16:30s. Time for last 1,000,000: 1s. Last read position: chr11:72,003,929
INFO 2026-06-08 08:55:09 MarkDuplicates Tracking 827200 as yet unmatched pairs. 25809 records in RAM.
INFO 2026-06-08 08:55:11 MarkDuplicates Read 382,000,000 records. Elapsed time: 00:16:32s. Time for last 1,000,000: 1s. Last read position: chr11:73,077,706
INFO 2026-06-08 08:55:11 MarkDuplicates Tracking 824024 as yet unmatched pairs. 22631 records in RAM.
INFO 2026-06-08 08:55:13 MarkDuplicates Read 383,000,000 records. Elapsed time: 00:16:34s. Time for last 1,000,000: 1s. Last read position: chr11:75,568,755
INFO 2026-06-08 08:55:13 MarkDuplicates Tracking 821387 as yet unmatched pairs. 19985 records in RAM.
INFO 2026-06-08 08:55:14 MarkDuplicates Read 384,000,000 records. Elapsed time: 00:16:36s. Time for last 1,000,000: 1s. Last read position: chr11:85,745,650
INFO 2026-06-08 08:55:14 MarkDuplicates Tracking 818543 as yet unmatched pairs. 17128 records in RAM.
INFO 2026-06-08 08:55:16 MarkDuplicates Read 385,000,000 records. Elapsed time: 00:16:38s. Time for last 1,000,000: 1s. Last read position: chr11:102,114,317
INFO 2026-06-08 08:55:16 MarkDuplicates Tracking 816465 as yet unmatched pairs. 15035 records in RAM.
INFO 2026-06-08 08:55:19 MarkDuplicates Read 386,000,000 records. Elapsed time: 00:16:41s. Time for last 1,000,000: 2s. Last read position: chr11:114,530,410
INFO 2026-06-08 08:55:19 MarkDuplicates Tracking 813377 as yet unmatched pairs. 11936 records in RAM.
INFO 2026-06-08 08:55:21 MarkDuplicates Read 387,000,000 records. Elapsed time: 00:16:43s. Time for last 1,000,000: 2s. Last read position: chr11:118,546,153
INFO 2026-06-08 08:55:21 MarkDuplicates Tracking 810672 as yet unmatched pairs. 9223 records in RAM.
INFO 2026-06-08 08:55:23 MarkDuplicates Read 388,000,000 records. Elapsed time: 00:16:45s. Time for last 1,000,000: 2s. Last read position: chr11:119,340,338
INFO 2026-06-08 08:55:23 MarkDuplicates Tracking 808097 as yet unmatched pairs. 6637 records in RAM.
INFO 2026-06-08 08:55:26 MarkDuplicates Read 389,000,000 records. Elapsed time: 00:16:48s. Time for last 1,000,000: 2s. Last read position: chr11:124,623,160
INFO 2026-06-08 08:55:26 MarkDuplicates Tracking 805394 as yet unmatched pairs. 3923 records in RAM.
INFO 2026-06-08 08:55:28 MarkDuplicates Read 390,000,000 records. Elapsed time: 00:16:50s. Time for last 1,000,000: 2s. Last read position: chr11:130,190,595
INFO 2026-06-08 08:55:28 MarkDuplicates Tracking 802965 as yet unmatched pairs. 1469 records in RAM.
INFO 2026-06-08 08:55:33 MarkDuplicates Read 391,000,000 records. Elapsed time: 00:16:54s. Time for last 1,000,000: 4s. Last read position: chr12:1,189,918
INFO 2026-06-08 08:55:33 MarkDuplicates Tracking 800111 as yet unmatched pairs. 79283 records in RAM.
INFO 2026-06-08 08:55:36 MarkDuplicates Read 392,000,000 records. Elapsed time: 00:16:58s. Time for last 1,000,000: 3s. Last read position: chr12:6,348,727
INFO 2026-06-08 08:55:36 MarkDuplicates Tracking 797262 as yet unmatched pairs. 76432 records in RAM.
INFO 2026-06-08 08:55:39 MarkDuplicates Read 393,000,000 records. Elapsed time: 00:17:00s. Time for last 1,000,000: 2s. Last read position: chr12:6,777,463
INFO 2026-06-08 08:55:39 MarkDuplicates Tracking 794645 as yet unmatched pairs. 73807 records in RAM.
INFO 2026-06-08 08:55:41 MarkDuplicates Read 394,000,000 records. Elapsed time: 00:17:02s. Time for last 1,000,000: 2s. Last read position: chr12:7,487,547
INFO 2026-06-08 08:55:41 MarkDuplicates Tracking 791829 as yet unmatched pairs. 70984 records in RAM.
INFO 2026-06-08 08:55:43 MarkDuplicates Read 395,000,000 records. Elapsed time: 00:17:04s. Time for last 1,000,000: 1s. Last read position: chr12:12,717,759
INFO 2026-06-08 08:55:43 MarkDuplicates Tracking 789575 as yet unmatched pairs. 68716 records in RAM.
INFO 2026-06-08 08:55:46 MarkDuplicates Read 396,000,000 records. Elapsed time: 00:17:07s. Time for last 1,000,000: 3s. Last read position: chr12:22,625,303
INFO 2026-06-08 08:55:46 MarkDuplicates Tracking 787132 as yet unmatched pairs. 66267 records in RAM.
INFO 2026-06-08 08:55:48 MarkDuplicates Read 397,000,000 records. Elapsed time: 00:17:10s. Time for last 1,000,000: 2s. Last read position: chr12:45,928,655
INFO 2026-06-08 08:55:48 MarkDuplicates Tracking 784717 as yet unmatched pairs. 63842 records in RAM.
INFO 2026-06-08 08:55:50 MarkDuplicates Read 398,000,000 records. Elapsed time: 00:17:12s. Time for last 1,000,000: 2s. Last read position: chr12:49,038,364
INFO 2026-06-08 08:55:50 MarkDuplicates Tracking 782178 as yet unmatched pairs. 61297 records in RAM.
INFO 2026-06-08 08:55:52 MarkDuplicates Read 399,000,000 records. Elapsed time: 00:17:14s. Time for last 1,000,000: 1s. Last read position: chr12:49,272,480
INFO 2026-06-08 08:55:52 MarkDuplicates Tracking 780315 as yet unmatched pairs. 59432 records in RAM.
INFO 2026-06-08 08:55:54 MarkDuplicates Read 400,000,000 records. Elapsed time: 00:17:16s. Time for last 1,000,000: 2s. Last read position: chr12:51,913,243
INFO 2026-06-08 08:55:54 MarkDuplicates Tracking 777239 as yet unmatched pairs. 56347 records in RAM.
INFO 2026-06-08 08:55:56 MarkDuplicates Read 401,000,000 records. Elapsed time: 00:17:18s. Time for last 1,000,000: 1s. Last read position: chr12:52,949,365
INFO 2026-06-08 08:55:56 MarkDuplicates Tracking 775184 as yet unmatched pairs. 54282 records in RAM.
INFO 2026-06-08 08:55:59 MarkDuplicates Read 402,000,000 records. Elapsed time: 00:17:21s. Time for last 1,000,000: 3s. Last read position: chr12:53,443,620
INFO 2026-06-08 08:55:59 MarkDuplicates Tracking 772216 as yet unmatched pairs. 51307 records in RAM.
INFO 2026-06-08 08:56:02 MarkDuplicates Read 403,000,000 records. Elapsed time: 00:17:23s. Time for last 1,000,000: 2s. Last read position: chr12:54,401,426
INFO 2026-06-08 08:56:02 MarkDuplicates Tracking 769576 as yet unmatched pairs. 48662 records in RAM.
INFO 2026-06-08 08:56:04 MarkDuplicates Read 404,000,000 records. Elapsed time: 00:17:26s. Time for last 1,000,000: 2s. Last read position: chr12:56,121,377
INFO 2026-06-08 08:56:04 MarkDuplicates Tracking 767000 as yet unmatched pairs. 46080 records in RAM.
INFO 2026-06-08 08:56:06 MarkDuplicates Read 405,000,000 records. Elapsed time: 00:17:28s. Time for last 1,000,000: 2s. Last read position: chr12:56,571,764
INFO 2026-06-08 08:56:06 MarkDuplicates Tracking 764514 as yet unmatched pairs. 43593 records in RAM.
INFO 2026-06-08 08:56:09 MarkDuplicates Read 406,000,000 records. Elapsed time: 00:17:30s. Time for last 1,000,000: 2s. Last read position: chr12:57,096,936
INFO 2026-06-08 08:56:09 MarkDuplicates Tracking 764129 as yet unmatched pairs. 43205 records in RAM.
INFO 2026-06-08 08:56:12 MarkDuplicates Read 407,000,000 records. Elapsed time: 00:17:33s. Time for last 1,000,000: 3s. Last read position: chr12:57,154,299
INFO 2026-06-08 08:56:12 MarkDuplicates Tracking 759308 as yet unmatched pairs. 38384 records in RAM.
INFO 2026-06-08 08:56:14 MarkDuplicates Read 408,000,000 records. Elapsed time: 00:17:36s. Time for last 1,000,000: 2s. Last read position: chr12:57,205,372
INFO 2026-06-08 08:56:14 MarkDuplicates Tracking 756745 as yet unmatched pairs. 35814 records in RAM.
INFO 2026-06-08 08:56:16 MarkDuplicates Read 409,000,000 records. Elapsed time: 00:17:38s. Time for last 1,000,000: 1s. Last read position: chr12:57,747,219
INFO 2026-06-08 08:56:16 MarkDuplicates Tracking 753717 as yet unmatched pairs. 32779 records in RAM.
INFO 2026-06-08 08:56:18 MarkDuplicates Read 410,000,000 records. Elapsed time: 00:17:40s. Time for last 1,000,000: 2s. Last read position: chr12:69,588,202
INFO 2026-06-08 08:56:18 MarkDuplicates Tracking 751103 as yet unmatched pairs. 30151 records in RAM.
INFO 2026-06-08 08:56:21 MarkDuplicates Read 411,000,000 records. Elapsed time: 00:17:42s. Time for last 1,000,000: 2s. Last read position: chr12:89,525,154
INFO 2026-06-08 08:56:21 MarkDuplicates Tracking 748773 as yet unmatched pairs. 27807 records in RAM.
INFO 2026-06-08 08:56:23 MarkDuplicates Read 412,000,000 records. Elapsed time: 00:17:44s. Time for last 1,000,000: 2s. Last read position: chr12:101,698,010
INFO 2026-06-08 08:56:23 MarkDuplicates Tracking 746266 as yet unmatched pairs. 25281 records in RAM.
INFO 2026-06-08 08:56:25 MarkDuplicates Read 413,000,000 records. Elapsed time: 00:17:46s. Time for last 1,000,000: 2s. Last read position: chr12:108,857,402
INFO 2026-06-08 08:56:25 MarkDuplicates Tracking 743762 as yet unmatched pairs. 22763 records in RAM.
INFO 2026-06-08 08:56:28 MarkDuplicates Read 414,000,000 records. Elapsed time: 00:17:49s. Time for last 1,000,000: 3s. Last read position: chr12:112,013,497
INFO 2026-06-08 08:56:28 MarkDuplicates Tracking 741324 as yet unmatched pairs. 20319 records in RAM.
INFO 2026-06-08 08:56:30 MarkDuplicates Read 415,000,000 records. Elapsed time: 00:17:51s. Time for last 1,000,000: 1s. Last read position: chr12:114,671,846
INFO 2026-06-08 08:56:30 MarkDuplicates Tracking 738612 as yet unmatched pairs. 17602 records in RAM.
INFO 2026-06-08 08:56:31 MarkDuplicates Read 416,000,000 records. Elapsed time: 00:17:53s. Time for last 1,000,000: 1s. Last read position: chr12:120,197,410
INFO 2026-06-08 08:56:31 MarkDuplicates Tracking 739248 as yet unmatched pairs. 18224 records in RAM.
INFO 2026-06-08 08:56:33 MarkDuplicates Read 417,000,000 records. Elapsed time: 00:17:55s. Time for last 1,000,000: 1s. Last read position: chr12:121,810,098
INFO 2026-06-08 08:56:33 MarkDuplicates Tracking 733337 as yet unmatched pairs. 12299 records in RAM.
INFO 2026-06-08 08:56:35 MarkDuplicates Read 418,000,000 records. Elapsed time: 00:17:57s. Time for last 1,000,000: 1s. Last read position: chr12:122,981,144
INFO 2026-06-08 08:56:35 MarkDuplicates Tracking 730603 as yet unmatched pairs. 9552 records in RAM.
INFO 2026-06-08 08:56:37 MarkDuplicates Read 419,000,000 records. Elapsed time: 00:17:59s. Time for last 1,000,000: 1s. Last read position: chr12:124,354,114
INFO 2026-06-08 08:56:37 MarkDuplicates Tracking 727926 as yet unmatched pairs. 6865 records in RAM.
INFO 2026-06-08 08:56:39 MarkDuplicates Read 420,000,000 records. Elapsed time: 00:18:01s. Time for last 1,000,000: 2s. Last read position: chr12:131,894,857
INFO 2026-06-08 08:56:39 MarkDuplicates Tracking 724934 as yet unmatched pairs. 3859 records in RAM.
INFO 2026-06-08 08:56:42 MarkDuplicates Read 421,000,000 records. Elapsed time: 00:18:04s. Time for last 1,000,000: 2s. Last read position: chr12:132,784,177
INFO 2026-06-08 08:56:42 MarkDuplicates Tracking 721898 as yet unmatched pairs. 819 records in RAM.
INFO 2026-06-08 08:56:44 MarkDuplicates Read 422,000,000 records. Elapsed time: 00:18:06s. Time for last 1,000,000: 1s. Last read position: chr13:24,453,644
INFO 2026-06-08 08:56:44 MarkDuplicates Tracking 719400 as yet unmatched pairs. 18652 records in RAM.
INFO 2026-06-08 08:56:46 MarkDuplicates Read 423,000,000 records. Elapsed time: 00:18:07s. Time for last 1,000,000: 1s. Last read position: chr13:32,536,984
INFO 2026-06-08 08:56:46 MarkDuplicates Tracking 716840 as yet unmatched pairs. 16086 records in RAM.
INFO 2026-06-08 08:56:48 MarkDuplicates Read 424,000,000 records. Elapsed time: 00:18:09s. Time for last 1,000,000: 1s. Last read position: chr13:45,338,702
INFO 2026-06-08 08:56:48 MarkDuplicates Tracking 714654 as yet unmatched pairs. 13886 records in RAM.
INFO 2026-06-08 08:56:49 MarkDuplicates Read 425,000,000 records. Elapsed time: 00:18:11s. Time for last 1,000,000: 1s. Last read position: chr13:71,675,441
INFO 2026-06-08 08:56:49 MarkDuplicates Tracking 711693 as yet unmatched pairs. 10901 records in RAM.
INFO 2026-06-08 08:56:51 MarkDuplicates Read 426,000,000 records. Elapsed time: 00:18:13s. Time for last 1,000,000: 1s. Last read position: chr13:96,023,710
INFO 2026-06-08 08:56:51 MarkDuplicates Tracking 708872 as yet unmatched pairs. 8073 records in RAM.
INFO 2026-06-08 08:56:53 MarkDuplicates Read 427,000,000 records. Elapsed time: 00:18:15s. Time for last 1,000,000: 1s. Last read position: chr13:109,785,613
INFO 2026-06-08 08:56:53 MarkDuplicates Tracking 705983 as yet unmatched pairs. 5174 records in RAM.
INFO 2026-06-08 08:56:55 MarkDuplicates Read 428,000,000 records. Elapsed time: 00:18:17s. Time for last 1,000,000: 1s. Last read position: chr13:111,274,773
INFO 2026-06-08 08:56:55 MarkDuplicates Tracking 702902 as yet unmatched pairs. 2082 records in RAM.
INFO 2026-06-08 08:56:58 MarkDuplicates Read 429,000,000 records. Elapsed time: 00:18:19s. Time for last 1,000,000: 2s. Last read position: chr14:20,801,583
INFO 2026-06-08 08:56:58 MarkDuplicates Tracking 700299 as yet unmatched pairs. 48986 records in RAM.
INFO 2026-06-08 08:57:01 MarkDuplicates Read 430,000,000 records. Elapsed time: 00:18:23s. Time for last 1,000,000: 3s. Last read position: chr14:22,877,213
INFO 2026-06-08 08:57:01 MarkDuplicates Tracking 697536 as yet unmatched pairs. 46216 records in RAM.
INFO 2026-06-08 08:57:03 MarkDuplicates Read 431,000,000 records. Elapsed time: 00:18:25s. Time for last 1,000,000: 2s. Last read position: chr14:24,123,222
INFO 2026-06-08 08:57:03 MarkDuplicates Tracking 694656 as yet unmatched pairs. 43328 records in RAM.
INFO 2026-06-08 08:57:05 MarkDuplicates Read 432,000,000 records. Elapsed time: 00:18:27s. Time for last 1,000,000: 1s. Last read position: chr14:24,631,077
INFO 2026-06-08 08:57:05 MarkDuplicates Tracking 691884 as yet unmatched pairs. 40553 records in RAM.
INFO 2026-06-08 08:57:07 MarkDuplicates Read 433,000,000 records. Elapsed time: 00:18:29s. Time for last 1,000,000: 2s. Last read position: chr14:49,586,672
INFO 2026-06-08 08:57:07 MarkDuplicates Tracking 690098 as yet unmatched pairs. 38736 records in RAM.
INFO 2026-06-08 08:57:09 MarkDuplicates Read 434,000,000 records. Elapsed time: 00:18:31s. Time for last 1,000,000: 1s. Last read position: chr14:55,138,333
INFO 2026-06-08 08:57:09 MarkDuplicates Tracking 688084 as yet unmatched pairs. 36693 records in RAM.
INFO 2026-06-08 08:57:11 MarkDuplicates Read 435,000,000 records. Elapsed time: 00:18:33s. Time for last 1,000,000: 1s. Last read position: chr14:64,152,653
INFO 2026-06-08 08:57:11 MarkDuplicates Tracking 684634 as yet unmatched pairs. 33235 records in RAM.
INFO 2026-06-08 08:57:13 MarkDuplicates Read 436,000,000 records. Elapsed time: 00:18:35s. Time for last 1,000,000: 2s. Last read position: chr14:67,798,428
INFO 2026-06-08 08:57:13 MarkDuplicates Tracking 682072 as yet unmatched pairs. 30665 records in RAM.
INFO 2026-06-08 08:57:15 MarkDuplicates Read 437,000,000 records. Elapsed time: 00:18:37s. Time for last 1,000,000: 2s. Last read position: chr14:73,071,655
INFO 2026-06-08 08:57:15 MarkDuplicates Tracking 679373 as yet unmatched pairs. 27953 records in RAM.
INFO 2026-06-08 08:57:17 MarkDuplicates Read 438,000,000 records. Elapsed time: 00:18:39s. Time for last 1,000,000: 2s. Last read position: chr14:75,134,848
INFO 2026-06-08 08:57:17 MarkDuplicates Tracking 676928 as yet unmatched pairs. 25492 records in RAM.
INFO 2026-06-08 08:57:20 MarkDuplicates Read 439,000,000 records. Elapsed time: 00:18:41s. Time for last 1,000,000: 2s. Last read position: chr14:82,692,770
INFO 2026-06-08 08:57:20 MarkDuplicates Tracking 674108 as yet unmatched pairs. 22658 records in RAM.
INFO 2026-06-08 08:57:22 MarkDuplicates Read 440,000,000 records. Elapsed time: 00:18:43s. Time for last 1,000,000: 1s. Last read position: chr14:94,079,281
INFO 2026-06-08 08:57:22 MarkDuplicates Tracking 671573 as yet unmatched pairs. 20110 records in RAM.
INFO 2026-06-08 08:57:24 MarkDuplicates Read 441,000,000 records. Elapsed time: 00:18:46s. Time for last 1,000,000: 2s. Last read position: chr14:102,001,670
INFO 2026-06-08 08:57:24 MarkDuplicates Tracking 668924 as yet unmatched pairs. 17392 records in RAM.
INFO 2026-06-08 08:57:26 MarkDuplicates Read 442,000,000 records. Elapsed time: 00:18:48s. Time for last 1,000,000: 1s. Last read position: chr14:103,491,905
INFO 2026-06-08 08:57:26 MarkDuplicates Tracking 666193 as yet unmatched pairs. 14649 records in RAM.
INFO 2026-06-08 08:57:28 MarkDuplicates Read 443,000,000 records. Elapsed time: 00:18:50s. Time for last 1,000,000: 1s. Last read position: chr14:104,773,947
INFO 2026-06-08 08:57:28 MarkDuplicates Tracking 662977 as yet unmatched pairs. 11425 records in RAM.
INFO 2026-06-08 08:57:30 MarkDuplicates Read 444,000,000 records. Elapsed time: 00:18:51s. Time for last 1,000,000: 1s. Last read position: chr14:105,450,137
INFO 2026-06-08 08:57:30 MarkDuplicates Tracking 659902 as yet unmatched pairs. 8346 records in RAM.
INFO 2026-06-08 08:57:31 MarkDuplicates Read 445,000,000 records. Elapsed time: 00:18:53s. Time for last 1,000,000: 1s. Last read position: chr14:105,625,115
INFO 2026-06-08 08:57:31 MarkDuplicates Tracking 657613 as yet unmatched pairs. 6048 records in RAM.
INFO 2026-06-08 08:57:33 MarkDuplicates Read 446,000,000 records. Elapsed time: 00:18:54s. Time for last 1,000,000: 1s. Last read position: chr14:105,668,409
INFO 2026-06-08 08:57:33 MarkDuplicates Tracking 655739 as yet unmatched pairs. 4160 records in RAM.
INFO 2026-06-08 08:57:35 MarkDuplicates Read 447,000,000 records. Elapsed time: 00:18:57s. Time for last 1,000,000: 2s. Last read position: chr14:105,708,466
INFO 2026-06-08 08:57:35 MarkDuplicates Tracking 655436 as yet unmatched pairs. 3853 records in RAM.
INFO 2026-06-08 08:57:37 MarkDuplicates Read 448,000,000 records. Elapsed time: 00:18:59s. Time for last 1,000,000: 2s. Last read position: chr15:19,966,660
INFO 2026-06-08 08:57:37 MarkDuplicates Tracking 651585 as yet unmatched pairs. 42386 records in RAM.
INFO 2026-06-08 08:57:38 MarkDuplicates Read 449,000,000 records. Elapsed time: 00:19:00s. Time for last 1,000,000: 1s. Last read position: chr15:29,742,706
INFO 2026-06-08 08:57:38 MarkDuplicates Tracking 649624 as yet unmatched pairs. 40420 records in RAM.
INFO 2026-06-08 08:57:40 MarkDuplicates Read 450,000,000 records. Elapsed time: 00:19:02s. Time for last 1,000,000: 1s. Last read position: chr15:34,943,067
INFO 2026-06-08 08:57:40 MarkDuplicates Tracking 647362 as yet unmatched pairs. 38156 records in RAM.
INFO 2026-06-08 08:57:42 MarkDuplicates Read 451,000,000 records. Elapsed time: 00:19:04s. Time for last 1,000,000: 1s. Last read position: chr15:40,844,690
INFO 2026-06-08 08:57:42 MarkDuplicates Tracking 644678 as yet unmatched pairs. 35458 records in RAM.
INFO 2026-06-08 08:57:44 MarkDuplicates Read 452,000,000 records. Elapsed time: 00:19:06s. Time for last 1,000,000: 2s. Last read position: chr15:42,439,590
INFO 2026-06-08 08:57:44 MarkDuplicates Tracking 641819 as yet unmatched pairs. 32591 records in RAM.
INFO 2026-06-08 08:57:46 MarkDuplicates Read 453,000,000 records. Elapsed time: 00:19:08s. Time for last 1,000,000: 1s. Last read position: chr15:43,793,037
INFO 2026-06-08 08:57:46 MarkDuplicates Tracking 641618 as yet unmatched pairs. 32380 records in RAM.
INFO 2026-06-08 08:57:48 MarkDuplicates Read 454,000,000 records. Elapsed time: 00:19:10s. Time for last 1,000,000: 1s. Last read position: chr15:49,424,441
INFO 2026-06-08 08:57:48 MarkDuplicates Tracking 636779 as yet unmatched pairs. 27531 records in RAM.
INFO 2026-06-08 08:57:50 MarkDuplicates Read 455,000,000 records. Elapsed time: 00:19:11s. Time for last 1,000,000: 1s. Last read position: chr15:59,207,570
INFO 2026-06-08 08:57:50 MarkDuplicates Tracking 634494 as yet unmatched pairs. 25233 records in RAM.
INFO 2026-06-08 08:57:51 MarkDuplicates Read 456,000,000 records. Elapsed time: 00:19:13s. Time for last 1,000,000: 1s. Last read position: chr15:63,980,963
INFO 2026-06-08 08:57:51 MarkDuplicates Tracking 631675 as yet unmatched pairs. 22402 records in RAM.
INFO 2026-06-08 08:57:53 MarkDuplicates Read 457,000,000 records. Elapsed time: 00:19:15s. Time for last 1,000,000: 1s. Last read position: chr15:67,543,178
INFO 2026-06-08 08:57:53 MarkDuplicates Tracking 629043 as yet unmatched pairs. 19755 records in RAM.
INFO 2026-06-08 08:57:56 MarkDuplicates Read 458,000,000 records. Elapsed time: 00:19:17s. Time for last 1,000,000: 2s. Last read position: chr15:72,353,101
INFO 2026-06-08 08:57:56 MarkDuplicates Tracking 626496 as yet unmatched pairs. 17196 records in RAM.
INFO 2026-06-08 08:57:57 MarkDuplicates Read 459,000,000 records. Elapsed time: 00:19:19s. Time for last 1,000,000: 1s. Last read position: chr15:74,632,666
INFO 2026-06-08 08:57:57 MarkDuplicates Tracking 623654 as yet unmatched pairs. 14346 records in RAM.
INFO 2026-06-08 08:57:59 MarkDuplicates Read 460,000,000 records. Elapsed time: 00:19:21s. Time for last 1,000,000: 1s. Last read position: chr15:76,795,337
INFO 2026-06-08 08:57:59 MarkDuplicates Tracking 620611 as yet unmatched pairs. 11296 records in RAM.
INFO 2026-06-08 08:58:01 MarkDuplicates Read 461,000,000 records. Elapsed time: 00:19:22s. Time for last 1,000,000: 1s. Last read position: chr15:82,130,376
INFO 2026-06-08 08:58:01 MarkDuplicates Tracking 617953 as yet unmatched pairs. 8630 records in RAM.
INFO 2026-06-08 08:58:02 MarkDuplicates Read 462,000,000 records. Elapsed time: 00:19:24s. Time for last 1,000,000: 1s. Last read position: chr15:85,727,170
INFO 2026-06-08 08:58:02 MarkDuplicates Tracking 616237 as yet unmatched pairs. 6907 records in RAM.
INFO 2026-06-08 08:58:04 MarkDuplicates Read 463,000,000 records. Elapsed time: 00:19:26s. Time for last 1,000,000: 1s. Last read position: chr15:90,483,576
INFO 2026-06-08 08:58:04 MarkDuplicates Tracking 613536 as yet unmatched pairs. 4195 records in RAM.
INFO 2026-06-08 08:58:06 MarkDuplicates Read 464,000,000 records. Elapsed time: 00:19:28s. Time for last 1,000,000: 2s. Last read position: chr15:99,130,778
INFO 2026-06-08 08:58:06 MarkDuplicates Tracking 610878 as yet unmatched pairs. 1526 records in RAM.
INFO 2026-06-08 08:58:09 MarkDuplicates Read 465,000,000 records. Elapsed time: 00:19:30s. Time for last 1,000,000: 2s. Last read position: chr16:375,371
INFO 2026-06-08 08:58:09 MarkDuplicates Tracking 608186 as yet unmatched pairs. 101571 records in RAM.
INFO 2026-06-08 08:58:11 MarkDuplicates Read 466,000,000 records. Elapsed time: 00:19:32s. Time for last 1,000,000: 1s. Last read position: chr16:859,426
INFO 2026-06-08 08:58:11 MarkDuplicates Tracking 604486 as yet unmatched pairs. 97860 records in RAM.
INFO 2026-06-08 08:58:12 MarkDuplicates Read 467,000,000 records. Elapsed time: 00:19:34s. Time for last 1,000,000: 1s. Last read position: chr16:1,941,254
INFO 2026-06-08 08:58:12 MarkDuplicates Tracking 601387 as yet unmatched pairs. 94756 records in RAM.
INFO 2026-06-08 08:58:14 MarkDuplicates Read 468,000,000 records. Elapsed time: 00:19:36s. Time for last 1,000,000: 1s. Last read position: chr16:2,108,727
INFO 2026-06-08 08:58:14 MarkDuplicates Tracking 598110 as yet unmatched pairs. 91474 records in RAM.
INFO 2026-06-08 08:58:16 MarkDuplicates Read 469,000,000 records. Elapsed time: 00:19:37s. Time for last 1,000,000: 1s. Last read position: chr16:2,695,972
INFO 2026-06-08 08:58:16 MarkDuplicates Tracking 595109 as yet unmatched pairs. 88465 records in RAM.
INFO 2026-06-08 08:58:18 MarkDuplicates Read 470,000,000 records. Elapsed time: 00:19:39s. Time for last 1,000,000: 1s. Last read position: chr16:2,766,996
INFO 2026-06-08 08:58:18 MarkDuplicates Tracking 593414 as yet unmatched pairs. 86767 records in RAM.
INFO 2026-06-08 08:58:19 MarkDuplicates Read 471,000,000 records. Elapsed time: 00:19:41s. Time for last 1,000,000: 1s. Last read position: chr16:3,290,232
INFO 2026-06-08 08:58:19 MarkDuplicates Tracking 589548 as yet unmatched pairs. 82890 records in RAM.
INFO 2026-06-08 08:58:21 MarkDuplicates Read 472,000,000 records. Elapsed time: 00:19:42s. Time for last 1,000,000: 1s. Last read position: chr16:4,461,854
INFO 2026-06-08 08:58:21 MarkDuplicates Tracking 587205 as yet unmatched pairs. 80541 records in RAM.
INFO 2026-06-08 08:58:23 MarkDuplicates Read 473,000,000 records. Elapsed time: 00:19:44s. Time for last 1,000,000: 1s. Last read position: chr16:4,885,488
INFO 2026-06-08 08:58:23 MarkDuplicates Tracking 583830 as yet unmatched pairs. 77156 records in RAM.
INFO 2026-06-08 08:58:24 MarkDuplicates Read 474,000,000 records. Elapsed time: 00:19:46s. Time for last 1,000,000: 1s. Last read position: chr16:11,927,789
INFO 2026-06-08 08:58:24 MarkDuplicates Tracking 581313 as yet unmatched pairs. 74620 records in RAM.
INFO 2026-06-08 08:58:26 MarkDuplicates Read 475,000,000 records. Elapsed time: 00:19:48s. Time for last 1,000,000: 2s. Last read position: chr16:14,929,559
INFO 2026-06-08 08:58:26 MarkDuplicates Tracking 579885 as yet unmatched pairs. 73186 records in RAM.
INFO 2026-06-08 08:58:28 MarkDuplicates Read 476,000,000 records. Elapsed time: 00:19:50s. Time for last 1,000,000: 1s. Last read position: chr16:15,718,350
INFO 2026-06-08 08:58:28 MarkDuplicates Tracking 578607 as yet unmatched pairs. 71906 records in RAM.
INFO 2026-06-08 08:58:30 MarkDuplicates Read 477,000,000 records. Elapsed time: 00:19:51s. Time for last 1,000,000: 1s. Last read position: chr16:16,111,569
INFO 2026-06-08 08:58:30 MarkDuplicates Tracking 575504 as yet unmatched pairs. 68802 records in RAM.
INFO 2026-06-08 08:58:31 MarkDuplicates Read 478,000,000 records. Elapsed time: 00:19:53s. Time for last 1,000,000: 1s. Last read position: chr16:16,356,775
INFO 2026-06-08 08:58:31 MarkDuplicates Tracking 574744 as yet unmatched pairs. 68041 records in RAM.
INFO 2026-06-08 08:58:32 MarkDuplicates Read 479,000,000 records. Elapsed time: 00:19:54s. Time for last 1,000,000: 1s. Last read position: chr16:18,358,157
INFO 2026-06-08 08:58:32 MarkDuplicates Tracking 573923 as yet unmatched pairs. 67220 records in RAM.
INFO 2026-06-08 08:58:33 MarkDuplicates Read 480,000,000 records. Elapsed time: 00:19:55s. Time for last 1,000,000: 1s. Last read position: chr16:18,838,422
INFO 2026-06-08 08:58:33 MarkDuplicates Tracking 572400 as yet unmatched pairs. 65696 records in RAM.
INFO 2026-06-08 08:58:35 MarkDuplicates Read 481,000,000 records. Elapsed time: 00:19:57s. Time for last 1,000,000: 1s. Last read position: chr16:21,404,987
INFO 2026-06-08 08:58:35 MarkDuplicates Tracking 571234 as yet unmatched pairs. 64527 records in RAM.
INFO 2026-06-08 08:58:36 MarkDuplicates Read 482,000,000 records. Elapsed time: 00:19:58s. Time for last 1,000,000: 1s. Last read position: chr16:21,837,504
INFO 2026-06-08 08:58:36 MarkDuplicates Tracking 570868 as yet unmatched pairs. 64157 records in RAM.
INFO 2026-06-08 08:58:37 MarkDuplicates Read 483,000,000 records. Elapsed time: 00:19:59s. Time for last 1,000,000: 1s. Last read position: chr16:22,533,855
INFO 2026-06-08 08:58:37 MarkDuplicates Tracking 569327 as yet unmatched pairs. 62615 records in RAM.
INFO 2026-06-08 08:58:39 MarkDuplicates Read 484,000,000 records. Elapsed time: 00:20:00s. Time for last 1,000,000: 1s. Last read position: chr16:24,931,050
INFO 2026-06-08 08:58:39 MarkDuplicates Tracking 568006 as yet unmatched pairs. 61290 records in RAM.
INFO 2026-06-08 08:58:40 MarkDuplicates Read 485,000,000 records. Elapsed time: 00:20:02s. Time for last 1,000,000: 1s. Last read position: chr16:28,498,081
INFO 2026-06-08 08:58:40 MarkDuplicates Tracking 565495 as yet unmatched pairs. 58769 records in RAM.
INFO 2026-06-08 08:58:42 MarkDuplicates Read 486,000,000 records. Elapsed time: 00:20:03s. Time for last 1,000,000: 1s. Last read position: chr16:28,843,745
INFO 2026-06-08 08:58:42 MarkDuplicates Tracking 563938 as yet unmatched pairs. 57207 records in RAM.
INFO 2026-06-08 08:58:43 MarkDuplicates Read 487,000,000 records. Elapsed time: 00:20:05s. Time for last 1,000,000: 1s. Last read position: chr16:29,454,190
INFO 2026-06-08 08:58:43 MarkDuplicates Tracking 562255 as yet unmatched pairs. 55519 records in RAM.
INFO 2026-06-08 08:58:44 MarkDuplicates Read 488,000,000 records. Elapsed time: 00:20:06s. Time for last 1,000,000: 1s. Last read position: chr16:29,799,944
INFO 2026-06-08 08:58:44 MarkDuplicates Tracking 560743 as yet unmatched pairs. 54005 records in RAM.
INFO 2026-06-08 08:58:46 MarkDuplicates Read 489,000,000 records. Elapsed time: 00:20:08s. Time for last 1,000,000: 1s. Last read position: chr16:29,860,592
INFO 2026-06-08 08:58:46 MarkDuplicates Tracking 557640 as yet unmatched pairs. 50900 records in RAM.
INFO 2026-06-08 08:58:47 MarkDuplicates Read 490,000,000 records. Elapsed time: 00:20:09s. Time for last 1,000,000: 1s. Last read position: chr16:30,070,241
INFO 2026-06-08 08:58:47 MarkDuplicates Tracking 554979 as yet unmatched pairs. 48234 records in RAM.
INFO 2026-06-08 08:58:49 MarkDuplicates Read 491,000,000 records. Elapsed time: 00:20:11s. Time for last 1,000,000: 1s. Last read position: chr16:30,235,511
INFO 2026-06-08 08:58:49 MarkDuplicates Tracking 552954 as yet unmatched pairs. 46206 records in RAM.
INFO 2026-06-08 08:58:51 MarkDuplicates Read 492,000,000 records. Elapsed time: 00:20:13s. Time for last 1,000,000: 2s. Last read position: chr16:30,664,346
INFO 2026-06-08 08:58:51 MarkDuplicates Tracking 550280 as yet unmatched pairs. 43525 records in RAM.
INFO 2026-06-08 08:58:53 MarkDuplicates Read 493,000,000 records. Elapsed time: 00:20:14s. Time for last 1,000,000: 1s. Last read position: chr16:30,764,951
INFO 2026-06-08 08:58:53 MarkDuplicates Tracking 547658 as yet unmatched pairs. 40895 records in RAM.
INFO 2026-06-08 08:58:54 MarkDuplicates Read 494,000,000 records. Elapsed time: 00:20:16s. Time for last 1,000,000: 1s. Last read position: chr16:31,132,553
INFO 2026-06-08 08:58:54 MarkDuplicates Tracking 545238 as yet unmatched pairs. 38471 records in RAM.
INFO 2026-06-08 08:58:56 MarkDuplicates Read 495,000,000 records. Elapsed time: 00:20:18s. Time for last 1,000,000: 1s. Last read position: chr16:31,914,564
INFO 2026-06-08 08:58:56 MarkDuplicates Tracking 541827 as yet unmatched pairs. 35056 records in RAM.
INFO 2026-06-08 08:58:58 MarkDuplicates Read 496,000,000 records. Elapsed time: 00:20:20s. Time for last 1,000,000: 1s. Last read position: chr16:50,567,417
INFO 2026-06-08 08:58:58 MarkDuplicates Tracking 540003 as yet unmatched pairs. 33214 records in RAM.
INFO 2026-06-08 08:59:00 MarkDuplicates Read 497,000,000 records. Elapsed time: 00:20:22s. Time for last 1,000,000: 1s. Last read position: chr16:53,006,482
INFO 2026-06-08 08:59:00 MarkDuplicates Tracking 536325 as yet unmatched pairs. 29526 records in RAM.
INFO 2026-06-08 08:59:02 MarkDuplicates Read 498,000,000 records. Elapsed time: 00:20:23s. Time for last 1,000,000: 1s. Last read position: chr16:57,429,133
INFO 2026-06-08 08:59:02 MarkDuplicates Tracking 533822 as yet unmatched pairs. 27008 records in RAM.
INFO 2026-06-08 08:59:03 MarkDuplicates Read 499,000,000 records. Elapsed time: 00:20:25s. Time for last 1,000,000: 1s. Last read position: chr16:66,934,023
INFO 2026-06-08 08:59:03 MarkDuplicates Tracking 530921 as yet unmatched pairs. 24104 records in RAM.
INFO 2026-06-08 08:59:05 MarkDuplicates Read 500,000,000 records. Elapsed time: 00:20:27s. Time for last 1,000,000: 1s. Last read position: chr16:67,879,415
INFO 2026-06-08 08:59:05 MarkDuplicates Tracking 527829 as yet unmatched pairs. 21003 records in RAM.
INFO 2026-06-08 08:59:06 MarkDuplicates Read 501,000,000 records. Elapsed time: 00:20:28s. Time for last 1,000,000: 1s. Last read position: chr16:69,424,748
INFO 2026-06-08 08:59:06 MarkDuplicates Tracking 525353 as yet unmatched pairs. 18523 records in RAM.
INFO 2026-06-08 08:59:08 MarkDuplicates Read 502,000,000 records. Elapsed time: 00:20:30s. Time for last 1,000,000: 1s. Last read position: chr16:71,475,592
INFO 2026-06-08 08:59:08 MarkDuplicates Tracking 522537 as yet unmatched pairs. 15701 records in RAM.
INFO 2026-06-08 08:59:10 MarkDuplicates Read 503,000,000 records. Elapsed time: 00:20:31s. Time for last 1,000,000: 1s. Last read position: chr16:75,242,800
INFO 2026-06-08 08:59:10 MarkDuplicates Tracking 520277 as yet unmatched pairs. 13431 records in RAM.
INFO 2026-06-08 08:59:11 MarkDuplicates Read 504,000,000 records. Elapsed time: 00:20:33s. Time for last 1,000,000: 1s. Last read position: chr16:85,634,060
INFO 2026-06-08 08:59:11 MarkDuplicates Tracking 517115 as yet unmatched pairs. 10261 records in RAM.
INFO 2026-06-08 08:59:14 MarkDuplicates Read 505,000,000 records. Elapsed time: 00:20:35s. Time for last 1,000,000: 2s. Last read position: chr16:88,622,260
INFO 2026-06-08 08:59:14 MarkDuplicates Tracking 514001 as yet unmatched pairs. 7134 records in RAM.
INFO 2026-06-08 08:59:15 MarkDuplicates Read 506,000,000 records. Elapsed time: 00:20:37s. Time for last 1,000,000: 1s. Last read position: chr16:89,290,812
INFO 2026-06-08 08:59:15 MarkDuplicates Tracking 511052 as yet unmatched pairs. 4177 records in RAM.
INFO 2026-06-08 08:59:17 MarkDuplicates Read 507,000,000 records. Elapsed time: 00:20:39s. Time for last 1,000,000: 1s. Last read position: chr16:89,883,427
INFO 2026-06-08 08:59:17 MarkDuplicates Tracking 507673 as yet unmatched pairs. 784 records in RAM.
INFO 2026-06-08 08:59:20 MarkDuplicates Read 508,000,000 records. Elapsed time: 00:20:42s. Time for last 1,000,000: 2s. Last read position: chr17:1,651,137
INFO 2026-06-08 08:59:20 MarkDuplicates Tracking 504908 as yet unmatched pairs. 151214 records in RAM.
INFO 2026-06-08 08:59:22 MarkDuplicates Read 509,000,000 records. Elapsed time: 00:20:43s. Time for last 1,000,000: 1s. Last read position: chr17:3,951,643
INFO 2026-06-08 08:59:22 MarkDuplicates Tracking 502108 as yet unmatched pairs. 148409 records in RAM.
INFO 2026-06-08 08:59:23 MarkDuplicates Read 510,000,000 records. Elapsed time: 00:20:45s. Time for last 1,000,000: 1s. Last read position: chr17:5,023,800
INFO 2026-06-08 08:59:23 MarkDuplicates Tracking 499312 as yet unmatched pairs. 145611 records in RAM.
INFO 2026-06-08 08:59:25 MarkDuplicates Read 511,000,000 records. Elapsed time: 00:20:47s. Time for last 1,000,000: 1s. Last read position: chr17:7,466,153
INFO 2026-06-08 08:59:25 MarkDuplicates Tracking 496568 as yet unmatched pairs. 142861 records in RAM.
INFO 2026-06-08 08:59:27 MarkDuplicates Read 512,000,000 records. Elapsed time: 00:20:48s. Time for last 1,000,000: 1s. Last read position: chr17:8,143,457
INFO 2026-06-08 08:59:27 MarkDuplicates Tracking 493894 as yet unmatched pairs. 140180 records in RAM.
INFO 2026-06-08 08:59:28 MarkDuplicates Read 513,000,000 records. Elapsed time: 00:20:50s. Time for last 1,000,000: 1s. Last read position: chr17:16,617,320
INFO 2026-06-08 08:59:28 MarkDuplicates Tracking 491258 as yet unmatched pairs. 137537 records in RAM.
INFO 2026-06-08 08:59:30 MarkDuplicates Read 514,000,000 records. Elapsed time: 00:20:51s. Time for last 1,000,000: 1s. Last read position: chr17:19,309,929
INFO 2026-06-08 08:59:30 MarkDuplicates Tracking 488775 as yet unmatched pairs. 135047 records in RAM.
INFO 2026-06-08 08:59:31 MarkDuplicates Read 515,000,000 records. Elapsed time: 00:20:53s. Time for last 1,000,000: 1s. Last read position: chr17:28,349,121
INFO 2026-06-08 08:59:31 MarkDuplicates Tracking 486175 as yet unmatched pairs. 132439 records in RAM.
INFO 2026-06-08 08:59:33 MarkDuplicates Read 516,000,000 records. Elapsed time: 00:20:55s. Time for last 1,000,000: 1s. Last read position: chr17:29,116,722
INFO 2026-06-08 08:59:33 MarkDuplicates Tracking 483577 as yet unmatched pairs. 129836 records in RAM.
INFO 2026-06-08 08:59:35 MarkDuplicates Read 517,000,000 records. Elapsed time: 00:20:57s. Time for last 1,000,000: 2s. Last read position: chr17:32,369,641
INFO 2026-06-08 08:59:35 MarkDuplicates Tracking 480961 as yet unmatched pairs. 127215 records in RAM.
INFO 2026-06-08 08:59:36 MarkDuplicates Read 518,000,000 records. Elapsed time: 00:20:58s. Time for last 1,000,000: 1s. Last read position: chr17:36,450,581
INFO 2026-06-08 08:59:36 MarkDuplicates Tracking 478486 as yet unmatched pairs. 124737 records in RAM.
INFO 2026-06-08 08:59:38 MarkDuplicates Read 519,000,000 records. Elapsed time: 00:21:00s. Time for last 1,000,000: 1s. Last read position: chr17:38,720,454
INFO 2026-06-08 08:59:38 MarkDuplicates Tracking 476681 as yet unmatched pairs. 122931 records in RAM.
INFO 2026-06-08 08:59:39 MarkDuplicates Read 520,000,000 records. Elapsed time: 00:21:01s. Time for last 1,000,000: 1s. Last read position: chr17:39,653,617
INFO 2026-06-08 08:59:39 MarkDuplicates Tracking 473723 as yet unmatched pairs. 119970 records in RAM.
INFO 2026-06-08 08:59:41 MarkDuplicates Read 521,000,000 records. Elapsed time: 00:21:03s. Time for last 1,000,000: 1s. Last read position: chr17:39,724,755
INFO 2026-06-08 08:59:41 MarkDuplicates Tracking 471333 as yet unmatched pairs. 117577 records in RAM.
INFO 2026-06-08 08:59:43 MarkDuplicates Read 522,000,000 records. Elapsed time: 00:21:05s. Time for last 1,000,000: 1s. Last read position: chr17:40,352,434
INFO 2026-06-08 08:59:43 MarkDuplicates Tracking 468447 as yet unmatched pairs. 114687 records in RAM.
INFO 2026-06-08 08:59:44 MarkDuplicates Read 523,000,000 records. Elapsed time: 00:21:06s. Time for last 1,000,000: 1s. Last read position: chr17:41,819,527
INFO 2026-06-08 08:59:44 MarkDuplicates Tracking 465198 as yet unmatched pairs. 111435 records in RAM.
INFO 2026-06-08 08:59:46 MarkDuplicates Read 524,000,000 records. Elapsed time: 00:21:08s. Time for last 1,000,000: 1s. Last read position: chr17:42,696,024
INFO 2026-06-08 08:59:46 MarkDuplicates Tracking 462283 as yet unmatched pairs. 108520 records in RAM.
INFO 2026-06-08 08:59:50 MarkDuplicates Read 525,000,000 records. Elapsed time: 00:21:12s. Time for last 1,000,000: 3s. Last read position: chr17:43,533,891
INFO 2026-06-08 08:59:50 MarkDuplicates Tracking 461764 as yet unmatched pairs. 108001 records in RAM.
INFO 2026-06-08 08:59:52 MarkDuplicates Read 526,000,000 records. Elapsed time: 00:21:13s. Time for last 1,000,000: 1s. Last read position: chr17:44,879,556
INFO 2026-06-08 08:59:52 MarkDuplicates Tracking 456914 as yet unmatched pairs. 103145 records in RAM.
INFO 2026-06-08 08:59:53 MarkDuplicates Read 527,000,000 records. Elapsed time: 00:21:15s. Time for last 1,000,000: 1s. Last read position: chr17:46,548,404
INFO 2026-06-08 08:59:53 MarkDuplicates Tracking 454713 as yet unmatched pairs. 100936 records in RAM.
INFO 2026-06-08 08:59:55 MarkDuplicates Read 528,000,000 records. Elapsed time: 00:21:17s. Time for last 1,000,000: 1s. Last read position: chr17:48,593,335
INFO 2026-06-08 08:59:55 MarkDuplicates Tracking 453013 as yet unmatched pairs. 99231 records in RAM.
INFO 2026-06-08 08:59:57 MarkDuplicates Read 529,000,000 records. Elapsed time: 00:21:18s. Time for last 1,000,000: 1s. Last read position: chr17:50,185,591
INFO 2026-06-08 08:59:57 MarkDuplicates Tracking 452591 as yet unmatched pairs. 98805 records in RAM.
INFO 2026-06-08 08:59:58 MarkDuplicates Read 530,000,000 records. Elapsed time: 00:21:20s. Time for last 1,000,000: 1s. Last read position: chr17:50,186,849
INFO 2026-06-08 08:59:58 MarkDuplicates Tracking 452816 as yet unmatched pairs. 99028 records in RAM.
INFO 2026-06-08 09:00:00 MarkDuplicates Read 531,000,000 records. Elapsed time: 00:21:22s. Time for last 1,000,000: 1s. Last read position: chr17:50,187,527
INFO 2026-06-08 09:00:00 MarkDuplicates Tracking 450822 as yet unmatched pairs. 97034 records in RAM.
INFO 2026-06-08 09:00:02 MarkDuplicates Read 532,000,000 records. Elapsed time: 00:21:23s. Time for last 1,000,000: 1s. Last read position: chr17:50,188,578
INFO 2026-06-08 09:00:02 MarkDuplicates Tracking 455156 as yet unmatched pairs. 101366 records in RAM.
INFO 2026-06-08 09:00:03 MarkDuplicates Read 533,000,000 records. Elapsed time: 00:21:25s. Time for last 1,000,000: 1s. Last read position: chr17:50,189,265
INFO 2026-06-08 09:00:03 MarkDuplicates Tracking 444488 as yet unmatched pairs. 90687 records in RAM.
INFO 2026-06-08 09:00:05 MarkDuplicates Read 534,000,000 records. Elapsed time: 00:21:27s. Time for last 1,000,000: 1s. Last read position: chr17:50,189,723
INFO 2026-06-08 09:00:05 MarkDuplicates Tracking 447590 as yet unmatched pairs. 93785 records in RAM.
INFO 2026-06-08 09:00:07 MarkDuplicates Read 535,000,000 records. Elapsed time: 00:21:29s. Time for last 1,000,000: 2s. Last read position: chr17:50,190,542
INFO 2026-06-08 09:00:07 MarkDuplicates Tracking 441275 as yet unmatched pairs. 87468 records in RAM.
INFO 2026-06-08 09:00:10 MarkDuplicates Read 536,000,000 records. Elapsed time: 00:21:31s. Time for last 1,000,000: 2s. Last read position: chr17:50,192,649
INFO 2026-06-08 09:00:10 MarkDuplicates Tracking 431788 as yet unmatched pairs. 77980 records in RAM.
INFO 2026-06-08 09:00:11 MarkDuplicates Read 537,000,000 records. Elapsed time: 00:21:33s. Time for last 1,000,000: 1s. Last read position: chr17:50,193,992
INFO 2026-06-08 09:00:11 MarkDuplicates Tracking 433029 as yet unmatched pairs. 79221 records in RAM.
INFO 2026-06-08 09:00:13 MarkDuplicates Read 538,000,000 records. Elapsed time: 00:21:35s. Time for last 1,000,000: 1s. Last read position: chr17:50,194,435
INFO 2026-06-08 09:00:13 MarkDuplicates Tracking 435051 as yet unmatched pairs. 81237 records in RAM.
INFO 2026-06-08 09:00:15 MarkDuplicates Read 539,000,000 records. Elapsed time: 00:21:36s. Time for last 1,000,000: 1s. Last read position: chr17:50,195,463
INFO 2026-06-08 09:00:15 MarkDuplicates Tracking 423089 as yet unmatched pairs. 69270 records in RAM.
INFO 2026-06-08 09:00:16 MarkDuplicates Read 540,000,000 records. Elapsed time: 00:21:38s. Time for last 1,000,000: 1s. Last read position: chr17:50,196,182
INFO 2026-06-08 09:00:16 MarkDuplicates Tracking 431385 as yet unmatched pairs. 77562 records in RAM.
INFO 2026-06-08 09:00:18 MarkDuplicates Read 541,000,000 records. Elapsed time: 00:21:40s. Time for last 1,000,000: 1s. Last read position: chr17:50,197,015
INFO 2026-06-08 09:00:18 MarkDuplicates Tracking 425014 as yet unmatched pairs. 71180 records in RAM.
INFO 2026-06-08 09:00:20 MarkDuplicates Read 542,000,000 records. Elapsed time: 00:21:42s. Time for last 1,000,000: 1s. Last read position: chr17:50,198,438
INFO 2026-06-08 09:00:20 MarkDuplicates Tracking 413977 as yet unmatched pairs. 60136 records in RAM.
INFO 2026-06-08 09:00:22 MarkDuplicates Read 543,000,000 records. Elapsed time: 00:21:43s. Time for last 1,000,000: 1s. Last read position: chr17:50,199,555
INFO 2026-06-08 09:00:22 MarkDuplicates Tracking 411118 as yet unmatched pairs. 57272 records in RAM.
INFO 2026-06-08 09:00:23 MarkDuplicates Read 544,000,000 records. Elapsed time: 00:21:45s. Time for last 1,000,000: 1s. Last read position: chr17:50,385,123
INFO 2026-06-08 09:00:23 MarkDuplicates Tracking 404430 as yet unmatched pairs. 50583 records in RAM.
INFO 2026-06-08 09:00:26 MarkDuplicates Read 545,000,000 records. Elapsed time: 00:21:47s. Time for last 1,000,000: 2s. Last read position: chr17:57,106,930
INFO 2026-06-08 09:00:26 MarkDuplicates Tracking 401625 as yet unmatched pairs. 47775 records in RAM.
INFO 2026-06-08 09:00:28 MarkDuplicates Read 546,000,000 records. Elapsed time: 00:21:50s. Time for last 1,000,000: 2s. Last read position: chr17:58,358,608
INFO 2026-06-08 09:00:28 MarkDuplicates Tracking 400375 as yet unmatched pairs. 46515 records in RAM.
INFO 2026-06-08 09:00:30 MarkDuplicates Read 547,000,000 records. Elapsed time: 00:21:52s. Time for last 1,000,000: 1s. Last read position: chr17:60,056,152
INFO 2026-06-08 09:00:30 MarkDuplicates Tracking 396383 as yet unmatched pairs. 42520 records in RAM.
INFO 2026-06-08 09:00:31 MarkDuplicates Read 548,000,000 records. Elapsed time: 00:21:53s. Time for last 1,000,000: 1s. Last read position: chr17:63,833,632
INFO 2026-06-08 09:00:31 MarkDuplicates Tracking 393805 as yet unmatched pairs. 39940 records in RAM.
INFO 2026-06-08 09:00:33 MarkDuplicates Read 549,000,000 records. Elapsed time: 00:21:55s. Time for last 1,000,000: 1s. Last read position: chr17:65,537,219
INFO 2026-06-08 09:00:33 MarkDuplicates Tracking 391462 as yet unmatched pairs. 37590 records in RAM.
INFO 2026-06-08 09:02:53 MarkDuplicates Read 550,000,000 records. Elapsed time: 00:24:15s. Time for last 1,000,000: 140s. Last read position: chr17:67,924,577
INFO 2026-06-08 09:02:53 MarkDuplicates Tracking 388656 as yet unmatched pairs. 34780 records in RAM.
INFO 2026-06-08 09:02:56 MarkDuplicates Read 551,000,000 records. Elapsed time: 00:24:18s. Time for last 1,000,000: 2s. Last read position: chr17:73,196,585
INFO 2026-06-08 09:02:56 MarkDuplicates Tracking 385989 as yet unmatched pairs. 32104 records in RAM.
INFO 2026-06-08 09:02:58 MarkDuplicates Read 552,000,000 records. Elapsed time: 00:24:19s. Time for last 1,000,000: 1s. Last read position: chr17:75,339,048
INFO 2026-06-08 09:02:58 MarkDuplicates Tracking 383512 as yet unmatched pairs. 29610 records in RAM.
INFO 2026-06-08 09:02:59 MarkDuplicates Read 553,000,000 records. Elapsed time: 00:24:21s. Time for last 1,000,000: 1s. Last read position: chr17:75,730,249
INFO 2026-06-08 09:02:59 MarkDuplicates Tracking 380621 as yet unmatched pairs. 26714 records in RAM.
INFO 2026-06-08 09:03:01 MarkDuplicates Read 554,000,000 records. Elapsed time: 00:24:23s. Time for last 1,000,000: 1s. Last read position: chr17:76,018,198
INFO 2026-06-08 09:03:01 MarkDuplicates Tracking 377225 as yet unmatched pairs. 23311 records in RAM.
INFO 2026-06-08 09:03:03 MarkDuplicates Read 555,000,000 records. Elapsed time: 00:24:24s. Time for last 1,000,000: 1s. Last read position: chr17:77,493,005
INFO 2026-06-08 09:03:03 MarkDuplicates Tracking 374298 as yet unmatched pairs. 20380 records in RAM.
INFO 2026-06-08 09:03:04 MarkDuplicates Read 556,000,000 records. Elapsed time: 00:24:26s. Time for last 1,000,000: 1s. Last read position: chr17:78,995,154
INFO 2026-06-08 09:03:04 MarkDuplicates Tracking 371437 as yet unmatched pairs. 17519 records in RAM.
INFO 2026-06-08 09:03:06 MarkDuplicates Read 557,000,000 records. Elapsed time: 00:24:28s. Time for last 1,000,000: 1s. Last read position: chr17:80,345,608
INFO 2026-06-08 09:03:06 MarkDuplicates Tracking 368543 as yet unmatched pairs. 14617 records in RAM.
INFO 2026-06-08 09:03:08 MarkDuplicates Read 558,000,000 records. Elapsed time: 00:24:29s. Time for last 1,000,000: 1s. Last read position: chr17:81,511,360
INFO 2026-06-08 09:03:08 MarkDuplicates Tracking 366028 as yet unmatched pairs. 12096 records in RAM.
INFO 2026-06-08 09:03:10 MarkDuplicates Read 559,000,000 records. Elapsed time: 00:24:31s. Time for last 1,000,000: 1s. Last read position: chr17:81,855,228
INFO 2026-06-08 09:03:10 MarkDuplicates Tracking 363323 as yet unmatched pairs. 9389 records in RAM.
INFO 2026-06-08 09:03:11 MarkDuplicates Read 560,000,000 records. Elapsed time: 00:24:33s. Time for last 1,000,000: 1s. Last read position: chr17:81,996,788
INFO 2026-06-08 09:03:11 MarkDuplicates Tracking 359482 as yet unmatched pairs. 5545 records in RAM.
INFO 2026-06-08 09:03:13 MarkDuplicates Read 561,000,000 records. Elapsed time: 00:24:35s. Time for last 1,000,000: 1s. Last read position: chr17:82,236,784
INFO 2026-06-08 09:03:13 MarkDuplicates Tracking 356008 as yet unmatched pairs. 2062 records in RAM.
INFO 2026-06-08 09:03:15 MarkDuplicates Read 562,000,000 records. Elapsed time: 00:24:37s. Time for last 1,000,000: 1s. Last read position: chr18:6,462,922
INFO 2026-06-08 09:03:15 MarkDuplicates Tracking 353240 as yet unmatched pairs. 8658 records in RAM.
INFO 2026-06-08 09:03:17 MarkDuplicates Read 563,000,000 records. Elapsed time: 00:24:38s. Time for last 1,000,000: 1s. Last read position: chr18:26,038,571
INFO 2026-06-08 09:03:17 MarkDuplicates Tracking 350709 as yet unmatched pairs. 6115 records in RAM.
INFO 2026-06-08 09:03:18 MarkDuplicates Read 564,000,000 records. Elapsed time: 00:24:40s. Time for last 1,000,000: 1s. Last read position: chr18:50,055,293
INFO 2026-06-08 09:03:18 MarkDuplicates Tracking 348221 as yet unmatched pairs. 3613 records in RAM.
INFO 2026-06-08 09:03:20 MarkDuplicates Read 565,000,000 records. Elapsed time: 00:24:42s. Time for last 1,000,000: 1s. Last read position: chr18:75,286,804
INFO 2026-06-08 09:03:20 MarkDuplicates Tracking 345517 as yet unmatched pairs. 899 records in RAM.
INFO 2026-06-08 09:03:23 MarkDuplicates Read 566,000,000 records. Elapsed time: 00:24:45s. Time for last 1,000,000: 3s. Last read position: chr19:761,624
INFO 2026-06-08 09:03:23 MarkDuplicates Tracking 342935 as yet unmatched pairs. 135616 records in RAM.
INFO 2026-06-08 09:03:25 MarkDuplicates Read 567,000,000 records. Elapsed time: 00:24:47s. Time for last 1,000,000: 1s. Last read position: chr19:1,116,057
INFO 2026-06-08 09:03:25 MarkDuplicates Tracking 339259 as yet unmatched pairs. 131936 records in RAM.
INFO 2026-06-08 09:03:27 MarkDuplicates Read 568,000,000 records. Elapsed time: 00:24:48s. Time for last 1,000,000: 1s. Last read position: chr19:1,555,873
INFO 2026-06-08 09:03:27 MarkDuplicates Tracking 336170 as yet unmatched pairs. 128841 records in RAM.
INFO 2026-06-08 09:03:29 MarkDuplicates Read 569,000,000 records. Elapsed time: 00:24:51s. Time for last 1,000,000: 2s. Last read position: chr19:2,151,238
INFO 2026-06-08 09:03:29 MarkDuplicates Tracking 332871 as yet unmatched pairs. 125539 records in RAM.
INFO 2026-06-08 09:03:32 MarkDuplicates Read 570,000,000 records. Elapsed time: 00:24:53s. Time for last 1,000,000: 2s. Last read position: chr19:3,110,219
INFO 2026-06-08 09:03:32 MarkDuplicates Tracking 329681 as yet unmatched pairs. 122346 records in RAM.
INFO 2026-06-08 09:03:34 MarkDuplicates Read 571,000,000 records. Elapsed time: 00:24:56s. Time for last 1,000,000: 2s. Last read position: chr19:4,175,137
INFO 2026-06-08 09:03:34 MarkDuplicates Tracking 326352 as yet unmatched pairs. 119007 records in RAM.
INFO 2026-06-08 09:03:37 MarkDuplicates Read 572,000,000 records. Elapsed time: 00:24:58s. Time for last 1,000,000: 2s. Last read position: chr19:5,649,323
INFO 2026-06-08 09:03:37 MarkDuplicates Tracking 323501 as yet unmatched pairs. 116153 records in RAM.
INFO 2026-06-08 09:03:40 MarkDuplicates Read 573,000,000 records. Elapsed time: 00:25:01s. Time for last 1,000,000: 2s. Last read position: chr19:6,380,580
INFO 2026-06-08 09:03:40 MarkDuplicates Tracking 320723 as yet unmatched pairs. 113367 records in RAM.
INFO 2026-06-08 09:03:41 MarkDuplicates Read 574,000,000 records. Elapsed time: 00:25:03s. Time for last 1,000,000: 1s. Last read position: chr19:7,520,763
INFO 2026-06-08 09:03:41 MarkDuplicates Tracking 317940 as yet unmatched pairs. 110582 records in RAM.
INFO 2026-06-08 09:03:43 MarkDuplicates Read 575,000,000 records. Elapsed time: 00:25:05s. Time for last 1,000,000: 1s. Last read position: chr19:8,486,381
INFO 2026-06-08 09:03:43 MarkDuplicates Tracking 314712 as yet unmatched pairs. 107351 records in RAM.
INFO 2026-06-08 09:03:44 MarkDuplicates Read 576,000,000 records. Elapsed time: 00:25:06s. Time for last 1,000,000: 1s. Last read position: chr19:10,491,908
INFO 2026-06-08 09:03:44 MarkDuplicates Tracking 311721 as yet unmatched pairs. 104360 records in RAM.
INFO 2026-06-08 09:03:46 MarkDuplicates Read 577,000,000 records. Elapsed time: 00:25:08s. Time for last 1,000,000: 1s. Last read position: chr19:11,041,392
INFO 2026-06-08 09:03:46 MarkDuplicates Tracking 308967 as yet unmatched pairs. 101606 records in RAM.
INFO 2026-06-08 09:03:48 MarkDuplicates Read 578,000,000 records. Elapsed time: 00:25:09s. Time for last 1,000,000: 1s. Last read position: chr19:11,666,899
INFO 2026-06-08 09:03:48 MarkDuplicates Tracking 306087 as yet unmatched pairs. 98726 records in RAM.
INFO 2026-06-08 09:03:49 MarkDuplicates Read 579,000,000 records. Elapsed time: 00:25:11s. Time for last 1,000,000: 1s. Last read position: chr19:12,947,970
INFO 2026-06-08 09:03:49 MarkDuplicates Tracking 303282 as yet unmatched pairs. 95915 records in RAM.
INFO 2026-06-08 09:03:51 MarkDuplicates Read 580,000,000 records. Elapsed time: 00:25:13s. Time for last 1,000,000: 1s. Last read position: chr19:14,097,436
INFO 2026-06-08 09:03:51 MarkDuplicates Tracking 300497 as yet unmatched pairs. 93126 records in RAM.
INFO 2026-06-08 09:03:53 MarkDuplicates Read 581,000,000 records. Elapsed time: 00:25:14s. Time for last 1,000,000: 1s. Last read position: chr19:15,113,633
INFO 2026-06-08 09:03:53 MarkDuplicates Tracking 297198 as yet unmatched pairs. 89825 records in RAM.
INFO 2026-06-08 09:03:54 MarkDuplicates Read 582,000,000 records. Elapsed time: 00:25:16s. Time for last 1,000,000: 1s. Last read position: chr19:15,264,425
INFO 2026-06-08 09:03:54 MarkDuplicates Tracking 294413 as yet unmatched pairs. 87039 records in RAM.
INFO 2026-06-08 09:03:57 MarkDuplicates Read 583,000,000 records. Elapsed time: 00:25:19s. Time for last 1,000,000: 2s. Last read position: chr19:16,403,732
INFO 2026-06-08 09:03:57 MarkDuplicates Tracking 291358 as yet unmatched pairs. 83978 records in RAM.
INFO 2026-06-08 09:03:59 MarkDuplicates Read 584,000,000 records. Elapsed time: 00:25:21s. Time for last 1,000,000: 1s. Last read position: chr19:17,726,681
INFO 2026-06-08 09:03:59 MarkDuplicates Tracking 288272 as yet unmatched pairs. 80878 records in RAM.
INFO 2026-06-08 09:04:00 MarkDuplicates Read 585,000,000 records. Elapsed time: 00:25:22s. Time for last 1,000,000: 1s. Last read position: chr19:18,388,760
INFO 2026-06-08 09:04:00 MarkDuplicates Tracking 285270 as yet unmatched pairs. 77871 records in RAM.
INFO 2026-06-08 09:04:02 MarkDuplicates Read 586,000,000 records. Elapsed time: 00:25:24s. Time for last 1,000,000: 1s. Last read position: chr19:19,096,128
INFO 2026-06-08 09:04:02 MarkDuplicates Tracking 281982 as yet unmatched pairs. 74582 records in RAM.
INFO 2026-06-08 09:04:04 MarkDuplicates Read 587,000,000 records. Elapsed time: 00:25:26s. Time for last 1,000,000: 1s. Last read position: chr19:33,008,015
INFO 2026-06-08 09:04:04 MarkDuplicates Tracking 279255 as yet unmatched pairs. 71849 records in RAM.
INFO 2026-06-08 09:04:05 MarkDuplicates Read 588,000,000 records. Elapsed time: 00:25:27s. Time for last 1,000,000: 1s. Last read position: chr19:35,160,714
INFO 2026-06-08 09:04:05 MarkDuplicates Tracking 276632 as yet unmatched pairs. 69224 records in RAM.
INFO 2026-06-08 09:04:07 MarkDuplicates Read 589,000,000 records. Elapsed time: 00:25:29s. Time for last 1,000,000: 1s. Last read position: chr19:35,939,741
INFO 2026-06-08 09:04:07 MarkDuplicates Tracking 272953 as yet unmatched pairs. 65544 records in RAM.
INFO 2026-06-08 09:04:09 MarkDuplicates Read 590,000,000 records. Elapsed time: 00:25:30s. Time for last 1,000,000: 1s. Last read position: chr19:38,647,847
INFO 2026-06-08 09:04:09 MarkDuplicates Tracking 270742 as yet unmatched pairs. 63330 records in RAM.
INFO 2026-06-08 09:04:10 MarkDuplicates Read 591,000,000 records. Elapsed time: 00:25:32s. Time for last 1,000,000: 1s. Last read position: chr19:38,948,592
INFO 2026-06-08 09:04:10 MarkDuplicates Tracking 267428 as yet unmatched pairs. 60014 records in RAM.
INFO 2026-06-08 09:04:12 MarkDuplicates Read 592,000,000 records. Elapsed time: 00:25:34s. Time for last 1,000,000: 1s. Last read position: chr19:39,839,173
INFO 2026-06-08 09:04:12 MarkDuplicates Tracking 264695 as yet unmatched pairs. 57280 records in RAM.
INFO 2026-06-08 09:04:13 MarkDuplicates Read 593,000,000 records. Elapsed time: 00:25:35s. Time for last 1,000,000: 1s. Last read position: chr19:40,233,776
INFO 2026-06-08 09:04:13 MarkDuplicates Tracking 263197 as yet unmatched pairs. 55781 records in RAM.
INFO 2026-06-08 09:04:15 MarkDuplicates Read 594,000,000 records. Elapsed time: 00:25:37s. Time for last 1,000,000: 1s. Last read position: chr19:41,268,242
INFO 2026-06-08 09:04:15 MarkDuplicates Tracking 259142 as yet unmatched pairs. 51722 records in RAM.
INFO 2026-06-08 09:04:17 MarkDuplicates Read 595,000,000 records. Elapsed time: 00:25:38s. Time for last 1,000,000: 1s. Last read position: chr19:41,709,715
INFO 2026-06-08 09:04:17 MarkDuplicates Tracking 259676 as yet unmatched pairs. 52254 records in RAM.
INFO 2026-06-08 09:04:19 MarkDuplicates Read 596,000,000 records. Elapsed time: 00:25:41s. Time for last 1,000,000: 2s. Last read position: chr19:41,717,627
INFO 2026-06-08 09:04:19 MarkDuplicates Tracking 258988 as yet unmatched pairs. 51561 records in RAM.
INFO 2026-06-08 09:04:21 MarkDuplicates Read 597,000,000 records. Elapsed time: 00:25:43s. Time for last 1,000,000: 1s. Last read position: chr19:41,755,650
INFO 2026-06-08 09:04:21 MarkDuplicates Tracking 253317 as yet unmatched pairs. 45890 records in RAM.
INFO 2026-06-08 09:04:22 MarkDuplicates Read 598,000,000 records. Elapsed time: 00:25:44s. Time for last 1,000,000: 1s. Last read position: chr19:42,090,899
INFO 2026-06-08 09:04:22 MarkDuplicates Tracking 249018 as yet unmatched pairs. 41588 records in RAM.
INFO 2026-06-08 09:04:24 MarkDuplicates Read 599,000,000 records. Elapsed time: 00:25:45s. Time for last 1,000,000: 1s. Last read position: chr19:42,293,959
INFO 2026-06-08 09:04:24 MarkDuplicates Tracking 246276 as yet unmatched pairs. 38842 records in RAM.
INFO 2026-06-08 09:04:25 MarkDuplicates Read 600,000,000 records. Elapsed time: 00:25:47s. Time for last 1,000,000: 1s. Last read position: chr19:44,873,953
INFO 2026-06-08 09:04:25 MarkDuplicates Tracking 243159 as yet unmatched pairs. 35687 records in RAM.
INFO 2026-06-08 09:04:27 MarkDuplicates Read 601,000,000 records. Elapsed time: 00:25:49s. Time for last 1,000,000: 1s. Last read position: chr19:45,523,849
INFO 2026-06-08 09:04:27 MarkDuplicates Tracking 240091 as yet unmatched pairs. 32616 records in RAM.
INFO 2026-06-08 09:04:28 MarkDuplicates Read 602,000,000 records. Elapsed time: 00:25:50s. Time for last 1,000,000: 1s. Last read position: chr19:46,846,018
INFO 2026-06-08 09:04:28 MarkDuplicates Tracking 237089 as yet unmatched pairs. 29610 records in RAM.
INFO 2026-06-08 09:04:30 MarkDuplicates Read 603,000,000 records. Elapsed time: 00:25:51s. Time for last 1,000,000: 1s. Last read position: chr19:48,150,132
INFO 2026-06-08 09:04:30 MarkDuplicates Tracking 233763 as yet unmatched pairs. 26277 records in RAM.
INFO 2026-06-08 09:04:31 MarkDuplicates Read 604,000,000 records. Elapsed time: 00:25:53s. Time for last 1,000,000: 1s. Last read position: chr19:48,913,180
INFO 2026-06-08 09:04:31 MarkDuplicates Tracking 231071 as yet unmatched pairs. 23582 records in RAM.
INFO 2026-06-08 09:04:33 MarkDuplicates Read 605,000,000 records. Elapsed time: 00:25:55s. Time for last 1,000,000: 1s. Last read position: chr19:49,497,197
INFO 2026-06-08 09:04:33 MarkDuplicates Tracking 228624 as yet unmatched pairs. 21131 records in RAM.
INFO 2026-06-08 09:04:35 MarkDuplicates Read 606,000,000 records. Elapsed time: 00:25:56s. Time for last 1,000,000: 1s. Last read position: chr19:49,792,990
INFO 2026-06-08 09:04:35 MarkDuplicates Tracking 225039 as yet unmatched pairs. 17542 records in RAM.
INFO 2026-06-08 09:04:36 MarkDuplicates Read 607,000,000 records. Elapsed time: 00:25:58s. Time for last 1,000,000: 1s. Last read position: chr19:50,278,188
INFO 2026-06-08 09:04:36 MarkDuplicates Tracking 221711 as yet unmatched pairs. 14211 records in RAM.
INFO 2026-06-08 09:04:38 MarkDuplicates Read 608,000,000 records. Elapsed time: 00:25:59s. Time for last 1,000,000: 1s. Last read position: chr19:53,442,058
INFO 2026-06-08 09:04:38 MarkDuplicates Tracking 218624 as yet unmatched pairs. 11121 records in RAM.
INFO 2026-06-08 09:04:39 MarkDuplicates Read 609,000,000 records. Elapsed time: 00:26:01s. Time for last 1,000,000: 1s. Last read position: chr19:54,458,474
INFO 2026-06-08 09:04:39 MarkDuplicates Tracking 216032 as yet unmatched pairs. 8524 records in RAM.
INFO 2026-06-08 09:04:41 MarkDuplicates Read 610,000,000 records. Elapsed time: 00:26:03s. Time for last 1,000,000: 2s. Last read position: chr19:55,499,963
INFO 2026-06-08 09:04:41 MarkDuplicates Tracking 212705 as yet unmatched pairs. 5192 records in RAM.
INFO 2026-06-08 09:04:43 MarkDuplicates Read 611,000,000 records. Elapsed time: 00:26:05s. Time for last 1,000,000: 1s. Last read position: chr19:57,839,034
INFO 2026-06-08 09:04:43 MarkDuplicates Tracking 209868 as yet unmatched pairs. 2351 records in RAM.
INFO 2026-06-08 09:04:45 MarkDuplicates Read 612,000,000 records. Elapsed time: 00:26:07s. Time for last 1,000,000: 2s. Last read position: chr20:427,348
INFO 2026-06-08 09:04:45 MarkDuplicates Tracking 206936 as yet unmatched pairs. 68983 records in RAM.
INFO 2026-06-08 09:04:47 MarkDuplicates Read 613,000,000 records. Elapsed time: 00:26:09s. Time for last 1,000,000: 1s. Last read position: chr20:3,046,263
INFO 2026-06-08 09:04:47 MarkDuplicates Tracking 204191 as yet unmatched pairs. 66238 records in RAM.
INFO 2026-06-08 09:04:48 MarkDuplicates Read 614,000,000 records. Elapsed time: 00:26:10s. Time for last 1,000,000: 1s. Last read position: chr20:5,578,438
INFO 2026-06-08 09:04:48 MarkDuplicates Tracking 201493 as yet unmatched pairs. 63540 records in RAM.
INFO 2026-06-08 09:04:50 MarkDuplicates Read 615,000,000 records. Elapsed time: 00:26:12s. Time for last 1,000,000: 1s. Last read position: chr20:17,570,121
INFO 2026-06-08 09:04:50 MarkDuplicates Tracking 199090 as yet unmatched pairs. 61131 records in RAM.
INFO 2026-06-08 09:04:52 MarkDuplicates Read 616,000,000 records. Elapsed time: 00:26:13s. Time for last 1,000,000: 1s. Last read position: chr20:17,942,315
INFO 2026-06-08 09:04:52 MarkDuplicates Tracking 196648 as yet unmatched pairs. 58689 records in RAM.
INFO 2026-06-08 09:04:53 MarkDuplicates Read 617,000,000 records. Elapsed time: 00:26:15s. Time for last 1,000,000: 1s. Last read position: chr20:25,014,039
INFO 2026-06-08 09:04:53 MarkDuplicates Tracking 193573 as yet unmatched pairs. 55611 records in RAM.
INFO 2026-06-08 09:04:54 MarkDuplicates Read 618,000,000 records. Elapsed time: 00:26:16s. Time for last 1,000,000: 1s. Last read position: chr20:25,292,588
INFO 2026-06-08 09:04:54 MarkDuplicates Tracking 191259 as yet unmatched pairs. 53295 records in RAM.
INFO 2026-06-08 09:04:56 MarkDuplicates Read 619,000,000 records. Elapsed time: 00:26:18s. Time for last 1,000,000: 1s. Last read position: chr20:32,196,397
INFO 2026-06-08 09:04:56 MarkDuplicates Tracking 187699 as yet unmatched pairs. 49731 records in RAM.
INFO 2026-06-08 09:04:58 MarkDuplicates Read 620,000,000 records. Elapsed time: 00:26:19s. Time for last 1,000,000: 1s. Last read position: chr20:34,072,281
INFO 2026-06-08 09:04:58 MarkDuplicates Tracking 185023 as yet unmatched pairs. 47051 records in RAM.
INFO 2026-06-08 09:04:59 MarkDuplicates Read 621,000,000 records. Elapsed time: 00:26:21s. Time for last 1,000,000: 1s. Last read position: chr20:34,859,556
INFO 2026-06-08 09:04:59 MarkDuplicates Tracking 181982 as yet unmatched pairs. 44007 records in RAM.
INFO 2026-06-08 09:05:01 MarkDuplicates Read 622,000,000 records. Elapsed time: 00:26:22s. Time for last 1,000,000: 1s. Last read position: chr20:35,626,294
INFO 2026-06-08 09:05:01 MarkDuplicates Tracking 179677 as yet unmatched pairs. 41702 records in RAM.
INFO 2026-06-08 09:05:02 MarkDuplicates Read 623,000,000 records. Elapsed time: 00:26:24s. Time for last 1,000,000: 1s. Last read position: chr20:36,496,873
INFO 2026-06-08 09:05:02 MarkDuplicates Tracking 176668 as yet unmatched pairs. 38688 records in RAM.
INFO 2026-06-08 09:05:04 MarkDuplicates Read 624,000,000 records. Elapsed time: 00:26:26s. Time for last 1,000,000: 1s. Last read position: chr20:38,040,456
INFO 2026-06-08 09:05:04 MarkDuplicates Tracking 173587 as yet unmatched pairs. 35603 records in RAM.
INFO 2026-06-08 09:05:06 MarkDuplicates Read 625,000,000 records. Elapsed time: 00:26:27s. Time for last 1,000,000: 1s. Last read position: chr20:41,487,689
INFO 2026-06-08 09:05:06 MarkDuplicates Tracking 170839 as yet unmatched pairs. 32853 records in RAM.
INFO 2026-06-08 09:05:08 MarkDuplicates Read 626,000,000 records. Elapsed time: 00:26:30s. Time for last 1,000,000: 2s. Last read position: chr20:44,905,041
INFO 2026-06-08 09:05:08 MarkDuplicates Tracking 168403 as yet unmatched pairs. 30412 records in RAM.
INFO 2026-06-08 09:05:10 MarkDuplicates Read 627,000,000 records. Elapsed time: 00:26:32s. Time for last 1,000,000: 2s. Last read position: chr20:45,892,281
INFO 2026-06-08 09:05:10 MarkDuplicates Tracking 166046 as yet unmatched pairs. 28052 records in RAM.
INFO 2026-06-08 09:05:12 MarkDuplicates Read 628,000,000 records. Elapsed time: 00:26:34s. Time for last 1,000,000: 1s. Last read position: chr20:47,634,072
INFO 2026-06-08 09:05:12 MarkDuplicates Tracking 162696 as yet unmatched pairs. 24700 records in RAM.
INFO 2026-06-08 09:05:13 MarkDuplicates Read 629,000,000 records. Elapsed time: 00:26:35s. Time for last 1,000,000: 1s. Last read position: chr20:49,815,095
INFO 2026-06-08 09:05:13 MarkDuplicates Tracking 160261 as yet unmatched pairs. 22263 records in RAM.
INFO 2026-06-08 09:05:15 MarkDuplicates Read 630,000,000 records. Elapsed time: 00:26:37s. Time for last 1,000,000: 1s. Last read position: chr20:51,690,743
INFO 2026-06-08 09:05:15 MarkDuplicates Tracking 158053 as yet unmatched pairs. 20052 records in RAM.
INFO 2026-06-08 09:05:17 MarkDuplicates Read 631,000,000 records. Elapsed time: 00:26:38s. Time for last 1,000,000: 1s. Last read position: chr20:57,652,441
INFO 2026-06-08 09:05:17 MarkDuplicates Tracking 154972 as yet unmatched pairs. 16969 records in RAM.
INFO 2026-06-08 09:05:18 MarkDuplicates Read 632,000,000 records. Elapsed time: 00:26:40s. Time for last 1,000,000: 1s. Last read position: chr20:61,997,600
INFO 2026-06-08 09:05:18 MarkDuplicates Tracking 151486 as yet unmatched pairs. 13482 records in RAM.
INFO 2026-06-08 09:05:20 MarkDuplicates Read 633,000,000 records. Elapsed time: 00:26:41s. Time for last 1,000,000: 1s. Last read position: chr20:62,660,446
INFO 2026-06-08 09:05:20 MarkDuplicates Tracking 148472 as yet unmatched pairs. 10467 records in RAM.
INFO 2026-06-08 09:05:21 MarkDuplicates Read 634,000,000 records. Elapsed time: 00:26:43s. Time for last 1,000,000: 1s. Last read position: chr20:62,943,044
INFO 2026-06-08 09:05:21 MarkDuplicates Tracking 145568 as yet unmatched pairs. 7561 records in RAM.
INFO 2026-06-08 09:05:23 MarkDuplicates Read 635,000,000 records. Elapsed time: 00:26:45s. Time for last 1,000,000: 1s. Last read position: chr20:63,566,113
INFO 2026-06-08 09:05:23 MarkDuplicates Tracking 142343 as yet unmatched pairs. 4336 records in RAM.
INFO 2026-06-08 09:05:24 MarkDuplicates Read 636,000,000 records. Elapsed time: 00:26:46s. Time for last 1,000,000: 1s. Last read position: chr20:63,981,183
INFO 2026-06-08 09:05:24 MarkDuplicates Tracking 138901 as yet unmatched pairs. 893 records in RAM.
INFO 2026-06-08 09:05:26 MarkDuplicates Read 637,000,000 records. Elapsed time: 00:26:48s. Time for last 1,000,000: 1s. Last read position: chr21:8,214,751
INFO 2026-06-08 09:05:26 MarkDuplicates Tracking 137312 as yet unmatched pairs. 20973 records in RAM.
INFO 2026-06-08 09:05:27 MarkDuplicates Read 638,000,000 records. Elapsed time: 00:26:49s. Time for last 1,000,000: 1s. Last read position: chr21:8,254,565
INFO 2026-06-08 09:05:27 MarkDuplicates Tracking 135610 as yet unmatched pairs. 19223 records in RAM.
INFO 2026-06-08 09:05:28 MarkDuplicates Read 639,000,000 records. Elapsed time: 00:26:50s. Time for last 1,000,000: 0s. Last read position: chr21:8,260,349
INFO 2026-06-08 09:05:28 MarkDuplicates Tracking 135339 as yet unmatched pairs. 18948 records in RAM.
INFO 2026-06-08 09:05:29 MarkDuplicates Read 640,000,000 records. Elapsed time: 00:26:51s. Time for last 1,000,000: 1s. Last read position: chr21:8,399,904
INFO 2026-06-08 09:05:29 MarkDuplicates Tracking 134691 as yet unmatched pairs. 18295 records in RAM.
INFO 2026-06-08 09:05:31 MarkDuplicates Read 641,000,000 records. Elapsed time: 00:26:52s. Time for last 1,000,000: 1s. Last read position: chr21:8,441,988
INFO 2026-06-08 09:05:31 MarkDuplicates Tracking 133467 as yet unmatched pairs. 17067 records in RAM.
INFO 2026-06-08 09:05:32 MarkDuplicates Read 642,000,000 records. Elapsed time: 00:26:54s. Time for last 1,000,000: 1s. Last read position: chr21:8,444,588
INFO 2026-06-08 09:05:32 MarkDuplicates Tracking 132654 as yet unmatched pairs. 16250 records in RAM.
INFO 2026-06-08 09:05:34 MarkDuplicates Read 643,000,000 records. Elapsed time: 00:26:55s. Time for last 1,000,000: 1s. Last read position: chr21:31,663,789
INFO 2026-06-08 09:05:34 MarkDuplicates Tracking 130855 as yet unmatched pairs. 14447 records in RAM.
INFO 2026-06-08 09:05:36 MarkDuplicates Read 644,000,000 records. Elapsed time: 00:26:58s. Time for last 1,000,000: 2s. Last read position: chr21:34,834,458
INFO 2026-06-08 09:05:36 MarkDuplicates Tracking 127828 as yet unmatched pairs. 11420 records in RAM.
INFO 2026-06-08 09:05:38 MarkDuplicates Read 645,000,000 records. Elapsed time: 00:26:59s. Time for last 1,000,000: 1s. Last read position: chr21:41,168,362
INFO 2026-06-08 09:05:38 MarkDuplicates Tracking 124969 as yet unmatched pairs. 8555 records in RAM.
INFO 2026-06-08 09:05:39 MarkDuplicates Read 646,000,000 records. Elapsed time: 00:27:01s. Time for last 1,000,000: 1s. Last read position: chr21:44,322,146
INFO 2026-06-08 09:05:39 MarkDuplicates Tracking 122253 as yet unmatched pairs. 5838 records in RAM.
INFO 2026-06-08 09:05:41 MarkDuplicates Read 647,000,000 records. Elapsed time: 00:27:02s. Time for last 1,000,000: 1s. Last read position: chr21:46,112,350
INFO 2026-06-08 09:05:41 MarkDuplicates Tracking 119792 as yet unmatched pairs. 3376 records in RAM.
INFO 2026-06-08 09:05:43 MarkDuplicates Read 648,000,000 records. Elapsed time: 00:27:04s. Time for last 1,000,000: 1s. Last read position: chr22:17,791,279
INFO 2026-06-08 09:05:43 MarkDuplicates Tracking 115859 as yet unmatched pairs. 48421 records in RAM.
INFO 2026-06-08 09:05:44 MarkDuplicates Read 649,000,000 records. Elapsed time: 00:27:06s. Time for last 1,000,000: 1s. Last read position: chr22:19,980,210
INFO 2026-06-08 09:05:44 MarkDuplicates Tracking 112932 as yet unmatched pairs. 45494 records in RAM.
INFO 2026-06-08 09:05:46 MarkDuplicates Read 650,000,000 records. Elapsed time: 00:27:08s. Time for last 1,000,000: 1s. Last read position: chr22:20,993,729
INFO 2026-06-08 09:05:46 MarkDuplicates Tracking 109880 as yet unmatched pairs. 42441 records in RAM.
INFO 2026-06-08 09:05:47 MarkDuplicates Read 651,000,000 records. Elapsed time: 00:27:09s. Time for last 1,000,000: 1s. Last read position: chr22:23,273,650
INFO 2026-06-08 09:05:47 MarkDuplicates Tracking 107335 as yet unmatched pairs. 39896 records in RAM.
INFO 2026-06-08 09:05:49 MarkDuplicates Read 652,000,000 records. Elapsed time: 00:27:11s. Time for last 1,000,000: 1s. Last read position: chr22:24,119,619
INFO 2026-06-08 09:05:49 MarkDuplicates Tracking 103849 as yet unmatched pairs. 36403 records in RAM.
INFO 2026-06-08 09:05:51 MarkDuplicates Read 653,000,000 records. Elapsed time: 00:27:12s. Time for last 1,000,000: 1s. Last read position: chr22:28,711,909
INFO 2026-06-08 09:05:51 MarkDuplicates Tracking 101083 as yet unmatched pairs. 33637 records in RAM.
INFO 2026-06-08 09:05:52 MarkDuplicates Read 654,000,000 records. Elapsed time: 00:27:14s. Time for last 1,000,000: 1s. Last read position: chr22:29,299,824
INFO 2026-06-08 09:05:52 MarkDuplicates Tracking 98316 as yet unmatched pairs. 30869 records in RAM.
INFO 2026-06-08 09:05:54 MarkDuplicates Read 655,000,000 records. Elapsed time: 00:27:16s. Time for last 1,000,000: 1s. Last read position: chr22:31,093,577
INFO 2026-06-08 09:05:54 MarkDuplicates Tracking 95702 as yet unmatched pairs. 28253 records in RAM.
INFO 2026-06-08 09:05:56 MarkDuplicates Read 656,000,000 records. Elapsed time: 00:27:17s. Time for last 1,000,000: 1s. Last read position: chr22:35,809,895
INFO 2026-06-08 09:05:56 MarkDuplicates Tracking 92840 as yet unmatched pairs. 25389 records in RAM.
INFO 2026-06-08 09:05:57 MarkDuplicates Read 657,000,000 records. Elapsed time: 00:27:19s. Time for last 1,000,000: 1s. Last read position: chr22:36,322,445
INFO 2026-06-08 09:05:57 MarkDuplicates Tracking 91695 as yet unmatched pairs. 24244 records in RAM.
INFO 2026-06-08 09:05:59 MarkDuplicates Read 658,000,000 records. Elapsed time: 00:27:20s. Time for last 1,000,000: 1s. Last read position: chr22:37,757,875
INFO 2026-06-08 09:05:59 MarkDuplicates Tracking 86940 as yet unmatched pairs. 19489 records in RAM.
INFO 2026-06-08 09:06:00 MarkDuplicates Read 659,000,000 records. Elapsed time: 00:27:22s. Time for last 1,000,000: 1s. Last read position: chr22:38,729,486
INFO 2026-06-08 09:06:00 MarkDuplicates Tracking 83856 as yet unmatched pairs. 16405 records in RAM.
INFO 2026-06-08 09:06:02 MarkDuplicates Read 660,000,000 records. Elapsed time: 00:27:24s. Time for last 1,000,000: 1s. Last read position: chr22:40,861,636
INFO 2026-06-08 09:06:02 MarkDuplicates Tracking 80962 as yet unmatched pairs. 13511 records in RAM.
INFO 2026-06-08 09:06:03 MarkDuplicates Read 661,000,000 records. Elapsed time: 00:27:25s. Time for last 1,000,000: 1s. Last read position: chr22:41,893,187
INFO 2026-06-08 09:06:03 MarkDuplicates Tracking 78371 as yet unmatched pairs. 10918 records in RAM.
INFO 2026-06-08 09:06:05 MarkDuplicates Read 662,000,000 records. Elapsed time: 00:27:27s. Time for last 1,000,000: 1s. Last read position: chr22:44,848,987
INFO 2026-06-08 09:06:05 MarkDuplicates Tracking 75711 as yet unmatched pairs. 8258 records in RAM.
INFO 2026-06-08 09:06:07 MarkDuplicates Read 663,000,000 records. Elapsed time: 00:27:29s. Time for last 1,000,000: 1s. Last read position: chr22:50,185,960
INFO 2026-06-08 09:06:07 MarkDuplicates Tracking 72469 as yet unmatched pairs. 5015 records in RAM.
INFO 2026-06-08 09:06:09 MarkDuplicates Read 664,000,000 records. Elapsed time: 00:27:30s. Time for last 1,000,000: 1s. Last read position: chr22:50,464,818
INFO 2026-06-08 09:06:09 MarkDuplicates Tracking 69339 as yet unmatched pairs. 1884 records in RAM.
INFO 2026-06-08 09:06:11 MarkDuplicates Read 665,000,000 records. Elapsed time: 00:27:33s. Time for last 1,000,000: 2s. Last read position: chrX:2,490,204
INFO 2026-06-08 09:06:11 MarkDuplicates Tracking 65895 as yet unmatched pairs. 49692 records in RAM.
INFO 2026-06-08 09:06:13 MarkDuplicates Read 666,000,000 records. Elapsed time: 00:27:35s. Time for last 1,000,000: 1s. Last read position: chrX:10,567,445
INFO 2026-06-08 09:06:13 MarkDuplicates Tracking 63445 as yet unmatched pairs. 47239 records in RAM.
INFO 2026-06-08 09:06:14 MarkDuplicates Read 667,000,000 records. Elapsed time: 00:27:36s. Time for last 1,000,000: 1s. Last read position: chrX:20,156,156
INFO 2026-06-08 09:06:14 MarkDuplicates Tracking 61029 as yet unmatched pairs. 44771 records in RAM.
INFO 2026-06-08 09:06:16 MarkDuplicates Read 668,000,000 records. Elapsed time: 00:27:38s. Time for last 1,000,000: 1s. Last read position: chrX:40,074,137
INFO 2026-06-08 09:06:16 MarkDuplicates Tracking 58498 as yet unmatched pairs. 42236 records in RAM.
INFO 2026-06-08 09:06:17 MarkDuplicates Read 669,000,000 records. Elapsed time: 00:27:39s. Time for last 1,000,000: 1s. Last read position: chrX:47,142,421
INFO 2026-06-08 09:06:17 MarkDuplicates Tracking 56811 as yet unmatched pairs. 40546 records in RAM.
INFO 2026-06-08 09:06:19 MarkDuplicates Read 670,000,000 records. Elapsed time: 00:27:41s. Time for last 1,000,000: 1s. Last read position: chrX:48,575,643
INFO 2026-06-08 09:06:19 MarkDuplicates Tracking 53763 as yet unmatched pairs. 37498 records in RAM.
INFO 2026-06-08 09:06:21 MarkDuplicates Read 671,000,000 records. Elapsed time: 00:27:42s. Time for last 1,000,000: 1s. Last read position: chrX:49,077,791
INFO 2026-06-08 09:06:21 MarkDuplicates Tracking 50373 as yet unmatched pairs. 34108 records in RAM.
INFO 2026-06-08 09:06:22 MarkDuplicates Read 672,000,000 records. Elapsed time: 00:27:44s. Time for last 1,000,000: 1s. Last read position: chrX:53,412,010
INFO 2026-06-08 09:06:22 MarkDuplicates Tracking 47918 as yet unmatched pairs. 31653 records in RAM.
INFO 2026-06-08 09:06:24 MarkDuplicates Read 673,000,000 records. Elapsed time: 00:27:46s. Time for last 1,000,000: 1s. Last read position: chrX:54,456,220
INFO 2026-06-08 09:06:24 MarkDuplicates Tracking 45233 as yet unmatched pairs. 28968 records in RAM.
INFO 2026-06-08 09:06:25 MarkDuplicates Read 674,000,000 records. Elapsed time: 00:27:47s. Time for last 1,000,000: 1s. Last read position: chrX:70,492,092
INFO 2026-06-08 09:06:25 MarkDuplicates Tracking 42838 as yet unmatched pairs. 26573 records in RAM.
INFO 2026-06-08 09:06:27 MarkDuplicates Read 675,000,000 records. Elapsed time: 00:27:49s. Time for last 1,000,000: 1s. Last read position: chrX:71,463,843
INFO 2026-06-08 09:06:27 MarkDuplicates Tracking 40190 as yet unmatched pairs. 23925 records in RAM.
INFO 2026-06-08 09:06:28 MarkDuplicates Read 676,000,000 records. Elapsed time: 00:27:50s. Time for last 1,000,000: 1s. Last read position: chrX:77,902,655
INFO 2026-06-08 09:06:28 MarkDuplicates Tracking 38192 as yet unmatched pairs. 21927 records in RAM.
INFO 2026-06-08 09:06:30 MarkDuplicates Read 677,000,000 records. Elapsed time: 00:27:52s. Time for last 1,000,000: 1s. Last read position: chrX:101,395,360
INFO 2026-06-08 09:06:30 MarkDuplicates Tracking 35524 as yet unmatched pairs. 19259 records in RAM.
INFO 2026-06-08 09:06:32 MarkDuplicates Read 678,000,000 records. Elapsed time: 00:27:53s. Time for last 1,000,000: 1s. Last read position: chrX:119,406,498
INFO 2026-06-08 09:06:32 MarkDuplicates Tracking 33054 as yet unmatched pairs. 16786 records in RAM.
INFO 2026-06-08 09:06:33 MarkDuplicates Read 679,000,000 records. Elapsed time: 00:27:55s. Time for last 1,000,000: 1s. Last read position: chrX:130,014,267
INFO 2026-06-08 09:06:33 MarkDuplicates Tracking 30731 as yet unmatched pairs. 14462 records in RAM.
INFO 2026-06-08 09:06:35 MarkDuplicates Read 680,000,000 records. Elapsed time: 00:27:56s. Time for last 1,000,000: 1s. Last read position: chrX:149,549,468
INFO 2026-06-08 09:06:35 MarkDuplicates Tracking 28178 as yet unmatched pairs. 11906 records in RAM.
INFO 2026-06-08 09:06:37 MarkDuplicates Read 681,000,000 records. Elapsed time: 00:27:59s. Time for last 1,000,000: 2s. Last read position: chrX:153,910,357
INFO 2026-06-08 09:06:37 MarkDuplicates Tracking 25518 as yet unmatched pairs. 9244 records in RAM.
INFO 2026-06-08 09:06:39 MarkDuplicates Read 682,000,000 records. Elapsed time: 00:28:01s. Time for last 1,000,000: 2s. Last read position: chrX:154,352,326
INFO 2026-06-08 09:06:39 MarkDuplicates Tracking 22798 as yet unmatched pairs. 6524 records in RAM.
INFO 2026-06-08 09:06:40 MarkDuplicates Read 683,000,000 records. Elapsed time: 00:28:02s. Time for last 1,000,000: 1s. Last read position: chrX:154,399,848
INFO 2026-06-08 09:06:40 MarkDuplicates Tracking 20197 as yet unmatched pairs. 3923 records in RAM.
INFO 2026-06-08 09:06:42 MarkDuplicates Read 684,000,000 records. Elapsed time: 00:28:04s. Time for last 1,000,000: 1s. Last read position: chrX:155,071,517
INFO 2026-06-08 09:06:42 MarkDuplicates Tracking 16487 as yet unmatched pairs. 213 records in RAM.
INFO 2026-06-08 09:06:43 MarkDuplicates Read 685,000,000 records. Elapsed time: 00:28:05s. Time for last 1,000,000: 1s. Last read position: GL000220.1:109,812
INFO 2026-06-08 09:06:43 MarkDuplicates Tracking 14996 as yet unmatched pairs. 3370 records in RAM.
INFO 2026-06-08 09:06:44 MarkDuplicates Read 686,000,000 records. Elapsed time: 00:28:06s. Time for last 1,000,000: 0s. Last read position: GL000220.1:115,545
INFO 2026-06-08 09:06:44 MarkDuplicates Tracking 11826 as yet unmatched pairs. 199 records in RAM.
INFO 2026-06-08 09:06:46 MarkDuplicates Read 687,000,000 records. Elapsed time: 00:28:07s. Time for last 1,000,000: 1s. Last read position: GL000220.1:158,115
INFO 2026-06-08 09:06:46 MarkDuplicates Tracking 11832 as yet unmatched pairs. 205 records in RAM.
INFO 2026-06-08 09:06:47 MarkDuplicates Read 688,000,000 records. Elapsed time: 00:28:08s. Time for last 1,000,000: 1s. Last read position: GL000220.1:159,642
INFO 2026-06-08 09:06:47 MarkDuplicates Tracking 11642 as yet unmatched pairs. 15 records in RAM.
INFO 2026-06-08 09:06:48 MarkDuplicates Read 689,000,000 records. Elapsed time: 00:28:09s. Time for last 1,000,000: 1s. Last read position: KI270733.1:131,007
INFO 2026-06-08 09:06:48 MarkDuplicates Tracking 8682 as yet unmatched pairs. 8662 records in RAM.
INFO 2026-06-08 09:06:49 MarkDuplicates Read 690,000,000 records. Elapsed time: 00:28:11s. Time for last 1,000,000: 1s. Last read position: KI270733.1:133,193
INFO 2026-06-08 09:06:49 MarkDuplicates Tracking 1035 as yet unmatched pairs. 1015 records in RAM.
INFO 2026-06-08 09:06:50 MarkDuplicates Read 691,000,000 records. Elapsed time: 00:28:12s. Time for last 1,000,000: 1s. Last read position: KI270733.1:176,119
INFO 2026-06-08 09:06:50 MarkDuplicates Tracking 269 as yet unmatched pairs. 249 records in RAM.
INFO 2026-06-08 09:06:51 MarkDuplicates Read 692,000,000 records. Elapsed time: 00:28:13s. Time for last 1,000,000: 0s. Last read position: KI270733.1:178,746
INFO 2026-06-08 09:06:51 MarkDuplicates Tracking 23 as yet unmatched pairs. 3 records in RAM.
INFO 2026-06-08 09:06:51 MarkDuplicates Read 692077450 records. 0 pairs never matched.
INFO 2026-06-08 09:07:39 MarkDuplicates After buildSortedReadEndLists freeMemory: 204140224; totalMemory: 234881024; maxMemory: 63585648640
INFO 2026-06-08 09:07:39 MarkDuplicates Will retain up to 1987051520 duplicate indices before spilling to disk.
INFO 2026-06-08 09:07:45 MarkDuplicates Traversing read pair information and detecting duplicates.
WARNING 2026-06-08 09:07:45 SortingCollection There is not enough memory per file for buffering. Reading will be unbuffered.
INFO 2026-06-08 09:07:53 OpticalDuplicateFinder Large duplicate set. size = 1034
INFO 2026-06-08 09:07:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,961
INFO 2026-06-08 09:08:06 OpticalDuplicateFinder Large duplicate set. size = 2723
INFO 2026-06-08 09:08:06 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,084
INFO 2026-06-08 09:08:06 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,327
INFO 2026-06-08 09:08:06 OpticalDuplicateFinder Large duplicate set. size = 1314
INFO 2026-06-08 09:08:06 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,595
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder Large duplicate set. size = 2813
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,676
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,963
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder Large duplicate set. size = 1128
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,001
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder Large duplicate set. size = 2716
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,910
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:27,317
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder Large duplicate set. size = 1498
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,878
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder Large duplicate set. size = 1450
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:8,920
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder Large duplicate set. size = 1333
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,573
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder Large duplicate set. size = 2302
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,441
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,657
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder Large duplicate set. size = 2197
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,715
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,846
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder Large duplicate set. size = 1394
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-13,771
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder Large duplicate set. size = 1698
INFO 2026-06-08 09:08:08 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,749
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1831
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,689
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1078
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,644
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 2829
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,472
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:19,429
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1511
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,843
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1221
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,942
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1526
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,019
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1197
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,914
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1076
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,475
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 2270
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,430
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,121
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1113
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,745
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 2279
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,561
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,675
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1557
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,319
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1609
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-32,233
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 2592
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,498
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,972
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 2925
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,440
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,643
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1958
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,510
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1054
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-32,427
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1438
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,028
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1374
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,548
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1238
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,077
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1693
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,843
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1663
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:25,488
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1384
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:18,110
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder Large duplicate set. size = 1404
INFO 2026-06-08 09:08:09 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,663
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1110
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,647
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1094
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,763
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1131
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,789
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1557
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,516
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1388
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,709
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1119
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:6,234
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1289
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,688
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1112
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,324
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1031
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:6,178
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1007
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,503
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1398
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,584
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1168
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,645
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1053
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,783
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1464
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-13,885
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1552
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,856
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1226
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,790
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1183
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,987
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1206
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,494
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1069
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,702
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1226
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,171
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 2017
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,438
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,039
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1502
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,221
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1076
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,831
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1028
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,505
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1351
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,276
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1265
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,688
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1001
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,402
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1333
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,411
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1063
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,826
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1041
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,957
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1186
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,925
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1822
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,006
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1049
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,789
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1068
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,109
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1243
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,640
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1730
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,270
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1010
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:8,014
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1349
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,022
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1267
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,940
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1149
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,575
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1677
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,738
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1083
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,013
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 2847
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,310
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,198
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1106
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,250
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1327
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,957
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1540
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,954
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1567
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:19,947
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1478
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,710
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 2249
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,217
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,023
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1353
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,953
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 1236
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,813
INFO 2026-06-08 09:08:10 OpticalDuplicateFinder Large duplicate set. size = 3610
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,642
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,359
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,603
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1249
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,083
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1387
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,417
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1083
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,530
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1551
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,570
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1106
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,561
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1080
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:32,163
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1694
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,498
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 2684
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,130
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,084
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1009
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,310
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1252
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,034
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1589
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,033
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1582
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:19,793
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1007
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,432
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1601
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,242
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1098
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,037
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1364
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,025
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1953
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,978
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1209
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,014
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1162
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,522
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1514
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,546
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1184
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:32,300
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1480
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,282
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1100
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,129
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 2904
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,032
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,149
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 2670
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,473
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,509
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1146
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,383
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1275
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,977
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1263
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,400
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1004
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,407
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1001
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,276
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1089
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,548
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1059
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,722
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1307
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,763
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1469
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,493
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1130
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,135
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1205
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,095
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 2738
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,685
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,844
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1076
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-13,682
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1350
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,804
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1161
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,262
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1208
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,737
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1055
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,181
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1561
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,676
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1133
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,257
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder Large duplicate set. size = 1330
INFO 2026-06-08 09:08:11 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,637
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1661
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,215
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1641
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,459
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1668
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-27,565
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1603
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:25,432
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1136
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,976
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1392
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,929
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1375
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,814
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1162
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,635
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1126
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-32,621
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1020
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,092
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1427
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:18,272
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1031
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,843
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1423
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,393
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1062
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,225
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1410
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:1,785
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1153
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,223
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 2357
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:6,145
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,563
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1009
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:19,688
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1222
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,688
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1805
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,875
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1413
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,350
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1496
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,816
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1405
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,021
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 2217
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,794
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,693
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1053
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,357
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 3102
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,765
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,166
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,020
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 2515
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,608
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,099
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1204
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,187
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1159
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,667
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 5398
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,333
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,389
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,925
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 4,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,968
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 5,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,218
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 2151
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,796
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,247
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1005
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,013
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 2763
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,684
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,268
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1096
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,306
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1774
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,319
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1358
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:6,873
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 3126
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,516
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,599
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:6,032
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1237
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,861
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1593
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,351
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1384
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-27,387
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1174
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,982
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 2696
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-13,601
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,341
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1086
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,833
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1549
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,179
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1034
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-32,095
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1165
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,440
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1480
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-27,646
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1016
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,624
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1049
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,561
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 3139
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,578
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,911
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,875
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1424
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,421
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 2444
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,490
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,064
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 3716
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,816
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,681
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,383
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1730
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,856
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 3022
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:19,356
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,035
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,455
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1141
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,511
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1221
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,866
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1086
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,676
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder Large duplicate set. size = 1088
INFO 2026-06-08 09:08:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,689
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1174
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,253
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1321
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:1,979
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1213
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,030
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1253
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,113
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1175
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,365
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 2673
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,298
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,042
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1066
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,741
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1365
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,382
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 2180
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,637
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,604
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1062
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,098
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1054
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,233
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1012
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,634
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1024
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,078
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1060
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,148
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1071
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,286
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1326
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,430
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1188
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,587
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1035
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,917
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1411
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:8,766
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1121
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,640
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1191
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,044
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1423
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,290
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1129
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,110
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1191
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,787
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1003
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,783
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1021
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:19,348
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1088
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:8,079
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder Large duplicate set. size = 1342
INFO 2026-06-08 09:08:13 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,140
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1040
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,741
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1211
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,302
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1067
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,083
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1043
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,986
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 2257
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,471
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,999
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1016
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,620
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1199
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,200
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1509
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,260
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1333
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,165
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1364
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,827
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1595
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,731
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1195
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,750
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1244
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,013
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 2735
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:18,466
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,886
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1610
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,581
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1177
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,358
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1163
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,221
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1266
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,722
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1118
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,312
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1011
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,824
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1017
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,226
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1729
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,811
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1132
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,348
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1267
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,881
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1639
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,925
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder Large duplicate set. size = 1446
INFO 2026-06-08 09:08:14 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,936
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1270
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:6,598
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1652
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,848
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1048
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,109
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1147
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,780
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1171
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,921
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 2911
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,633
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,116
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1826
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:1,938
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1287
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,065
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1137
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:25,577
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1184
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,121
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1908
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:6,574
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1116
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,141
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1337
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,717
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 2273
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,033
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,391
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1433
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,396
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 2019
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,188
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,008
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1159
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:25,432
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1210
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,513
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1462
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,229
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1131
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,580
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1251
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,846
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1530
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:6,226
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1106
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,745
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 2560
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,547
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,627
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1372
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,311
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1552
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:27,770
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1596
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,179
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 3051
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,182
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,703
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,031
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1036
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,716
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1652
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,660
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1708
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,307
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1315
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:32,090
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 2341
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,542
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,224
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1238
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,432
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1333
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,575
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1322
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:1,324
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1138
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,314
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1393
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,580
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1003
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,032
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1456
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,288
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1518
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,571
INFO 2026-06-08 09:08:15 OpticalDuplicateFinder Large duplicate set. size = 1509
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,752
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1394
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,888
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1293
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,838
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 2016
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,604
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,459
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1087
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,961
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1549
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:19,761
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1088
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-32,645
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 2197
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,741
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,117
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1590
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:1,566
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1079
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,852
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1269
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,515
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1473
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,931
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 2504
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,799
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,846
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1165
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,881
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1244
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,366
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 2397
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,877
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,633
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1120
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,260
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1076
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,134
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1056
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,030
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1110
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,601
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1039
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,516
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1035
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,707
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1209
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,820
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1634
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-32,427
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder Large duplicate set. size = 1384
INFO 2026-06-08 09:08:16 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,226
INFO 2026-06-08 09:08:42 OpticalDuplicateFinder Large duplicate set. size = 1124
INFO 2026-06-08 09:08:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,348
INFO 2026-06-08 09:08:44 OpticalDuplicateFinder Large duplicate set. size = 1033
INFO 2026-06-08 09:08:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,095
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder Large duplicate set. size = 1218
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,078
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder Large duplicate set. size = 1195
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,195
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder Large duplicate set. size = 1858
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,576
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder Large duplicate set. size = 1393
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,083
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder Large duplicate set. size = 1494
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,755
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder Large duplicate set. size = 1122
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,911
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder Large duplicate set. size = 1087
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,773
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder Large duplicate set. size = 1661
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,884
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder Large duplicate set. size = 1324
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:25,302
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder Large duplicate set. size = 1006
INFO 2026-06-08 09:08:45 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:18,159
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1291
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:8,467
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1064
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,531
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1914
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,238
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1291
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,113
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1009
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:32,179
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1036
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,701
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1017
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,734
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1371
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:18,377
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1352
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:25,699
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1029
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,456
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1075
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,381
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1020
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,180
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1101
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,447
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1168
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,610
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1016
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,456
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1062
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,971
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1319
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,367
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1239
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,204
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1452
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,653
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1264
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:25,448
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1180
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,110
INFO 2026-06-08 09:08:46 OpticalDuplicateFinder Large duplicate set. size = 1476
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,938
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1239
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:32,721
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 3150
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,787
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,365
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,781
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1179
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,233
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1579
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,991
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 2015
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,094
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,331
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1628
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,967
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1093
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,583
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 2022
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,570
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,097
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1707
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,322
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1797
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:19,680
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1165
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,566
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1136
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,857
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 2031
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,297
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,740
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1098
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,977
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1796
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,651
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1146
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,676
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1034
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:25,132
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1103
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,016
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1002
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:19,469
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1025
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,070
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1316
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,038
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1785
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,290
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 2363
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,049
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,057
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1049
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,710
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 3416
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,394
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,671
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-32,152
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1014
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,971
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1219
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,241
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1070
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,112
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1113
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,439
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1344
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,695
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1409
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:19,227
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1265
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,670
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1050
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,476
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1059
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,609
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1426
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,277
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1284
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,138
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1010
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,687
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1368
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,084
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1216
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:8,241
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1020
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,812
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1516
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,378
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1460
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,104
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 2271
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,917
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,804
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 2320
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,993
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:1,332
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1141
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,672
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 2518
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,053
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,617
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1826
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,853
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 2584
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,968
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,998
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1134
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-13,650
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 3515
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,806
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,598
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-32,257
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1057
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,741
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1366
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,818
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1311
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,497
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 2983
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,294
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,854
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1359
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,558
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 2383
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:6,485
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,213
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 3168
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,816
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,884
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,473
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1954
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,387
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder Large duplicate set. size = 1556
INFO 2026-06-08 09:08:47 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,912
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1140
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,742
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1146
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,972
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1127
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,024
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1278
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,734
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1838
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,200
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1207
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,729
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1564
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,046
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1204
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,163
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1550
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,539
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1025
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,196
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 3322
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,870
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,098
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,908
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1310
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,784
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1422
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,439
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1640
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,099
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1396
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,807
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1393
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,176
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1055
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,219
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1238
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,720
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1737
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:1,955
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1066
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,593
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1038
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,652
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1351
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,429
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1126
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:25,529
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1329
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,802
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1029
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,422
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1312
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:19,696
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1183
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,871
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 2471
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,869
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,118
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1092
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,127
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 2708
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:8,548
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,506
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1204
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,388
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1107
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,232
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder Large duplicate set. size = 1102
INFO 2026-06-08 09:08:48 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,244
INFO 2026-06-08 09:08:54 OpticalDuplicateFinder Large duplicate set. size = 1036
INFO 2026-06-08 09:08:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,642
INFO 2026-06-08 09:09:20 MarkDuplicates Traversing fragment information and detecting duplicates.
WARNING 2026-06-08 09:09:20 SortingCollection There is not enough memory per file for buffering. Reading will be unbuffered.
INFO 2026-06-08 09:10:21 MarkDuplicates Sorting list of duplicate records.
INFO 2026-06-08 09:10:22 MarkDuplicates After generateDuplicateIndexes freeMemory: 203812360; totalMemory: 234881024; maxMemory: 63585648640
INFO 2026-06-08 09:10:22 MarkDuplicates Marking 287974039 records as duplicates.
INFO 2026-06-08 09:10:22 MarkDuplicates Found 5649927 optical duplicate clusters.
INFO 2026-06-08 09:10:22 MarkDuplicates Reads are assumed to be ordered by: coordinate
INFO 2026-06-08 09:10:39 MarkDuplicates Written 10,000,000 records. Elapsed time: 00:00:17s. Time for last 10,000,000: 17s. Last read position: chr1:22,086,710
INFO 2026-06-08 09:10:56 MarkDuplicates Written 20,000,000 records. Elapsed time: 00:00:34s. Time for last 10,000,000: 17s. Last read position: chr1:44,775,591
INFO 2026-06-08 09:11:13 MarkDuplicates Written 30,000,000 records. Elapsed time: 00:00:51s. Time for last 10,000,000: 17s. Last read position: chr1:146,989,570
INFO 2026-06-08 09:11:31 MarkDuplicates Written 40,000,000 records. Elapsed time: 00:01:08s. Time for last 10,000,000: 17s. Last read position: chr1:166,166,065
INFO 2026-06-08 09:11:48 MarkDuplicates Written 50,000,000 records. Elapsed time: 00:01:26s. Time for last 10,000,000: 17s. Last read position: chr1:234,608,938
INFO 2026-06-08 09:12:04 MarkDuplicates Written 60,000,000 records. Elapsed time: 00:01:42s. Time for last 10,000,000: 16s. Last read position: chr2:32,916,406
INFO 2026-06-08 09:12:21 MarkDuplicates Written 70,000,000 records. Elapsed time: 00:01:59s. Time for last 10,000,000: 16s. Last read position: chr2:96,619,650
INFO 2026-06-08 09:12:39 MarkDuplicates Written 80,000,000 records. Elapsed time: 00:02:17s. Time for last 10,000,000: 17s. Last read position: chr2:197,403,621
INFO 2026-06-08 09:12:56 MarkDuplicates Written 90,000,000 records. Elapsed time: 00:02:34s. Time for last 10,000,000: 17s. Last read position: chr2:240,520,527
INFO 2026-06-08 09:13:13 MarkDuplicates Written 100,000,000 records. Elapsed time: 00:02:51s. Time for last 10,000,000: 16s. Last read position: chr3:49,126,006
INFO 2026-06-08 09:13:30 MarkDuplicates Written 110,000,000 records. Elapsed time: 00:03:08s. Time for last 10,000,000: 17s. Last read position: chr3:138,622,332
INFO 2026-06-08 09:13:47 MarkDuplicates Written 120,000,000 records. Elapsed time: 00:03:25s. Time for last 10,000,000: 17s. Last read position: chr4:3,428,114
INFO 2026-06-08 09:14:04 MarkDuplicates Written 130,000,000 records. Elapsed time: 00:03:42s. Time for last 10,000,000: 16s. Last read position: chr4:148,436,024
INFO 2026-06-08 09:14:21 MarkDuplicates Written 140,000,000 records. Elapsed time: 00:03:59s. Time for last 10,000,000: 17s. Last read position: chr5:87,376,535
INFO 2026-06-08 09:14:38 MarkDuplicates Written 150,000,000 records. Elapsed time: 00:04:16s. Time for last 10,000,000: 16s. Last read position: chr5:151,663,485
INFO 2026-06-08 09:14:55 MarkDuplicates Written 160,000,000 records. Elapsed time: 00:04:33s. Time for last 10,000,000: 17s. Last read position: chr6:26,055,795
INFO 2026-06-08 09:15:12 MarkDuplicates Written 170,000,000 records. Elapsed time: 00:04:50s. Time for last 10,000,000: 16s. Last read position: chr6:36,481,626
INFO 2026-06-08 09:15:29 MarkDuplicates Written 180,000,000 records. Elapsed time: 00:05:07s. Time for last 10,000,000: 16s. Last read position: chr6:147,313,921
INFO 2026-06-08 09:15:45 MarkDuplicates Written 190,000,000 records. Elapsed time: 00:05:23s. Time for last 10,000,000: 16s. Last read position: chr7:22,136,075
INFO 2026-06-08 09:16:02 MarkDuplicates Written 200,000,000 records. Elapsed time: 00:05:40s. Time for last 10,000,000: 16s. Last read position: chr7:75,441,638
INFO 2026-06-08 09:16:19 MarkDuplicates Written 210,000,000 records. Elapsed time: 00:05:56s. Time for last 10,000,000: 16s. Last read position: chr7:100,992,859
INFO 2026-06-08 09:16:35 MarkDuplicates Written 220,000,000 records. Elapsed time: 00:06:13s. Time for last 10,000,000: 16s. Last read position: chr7:100,995,237
INFO 2026-06-08 09:16:51 MarkDuplicates Written 230,000,000 records. Elapsed time: 00:06:29s. Time for last 10,000,000: 16s. Last read position: chr7:100,996,878
INFO 2026-06-08 09:17:07 MarkDuplicates Written 240,000,000 records. Elapsed time: 00:06:45s. Time for last 10,000,000: 16s. Last read position: chr7:100,998,335
INFO 2026-06-08 09:17:24 MarkDuplicates Written 250,000,000 records. Elapsed time: 00:07:01s. Time for last 10,000,000: 16s. Last read position: chr7:100,999,775
INFO 2026-06-08 09:17:40 MarkDuplicates Written 260,000,000 records. Elapsed time: 00:07:18s. Time for last 10,000,000: 16s. Last read position: chr7:101,001,421
INFO 2026-06-08 09:17:56 MarkDuplicates Written 270,000,000 records. Elapsed time: 00:07:34s. Time for last 10,000,000: 16s. Last read position: chr7:101,003,891
INFO 2026-06-08 09:18:13 MarkDuplicates Written 280,000,000 records. Elapsed time: 00:07:51s. Time for last 10,000,000: 17s. Last read position: chr7:137,908,281
INFO 2026-06-08 09:18:31 MarkDuplicates Written 290,000,000 records. Elapsed time: 00:08:09s. Time for last 10,000,000: 18s. Last read position: chr8:29,146,449
INFO 2026-06-08 09:18:48 MarkDuplicates Written 300,000,000 records. Elapsed time: 00:08:26s. Time for last 10,000,000: 16s. Last read position: chr8:125,433,500
INFO 2026-06-08 09:19:05 MarkDuplicates Written 310,000,000 records. Elapsed time: 00:08:43s. Time for last 10,000,000: 16s. Last read position: chr8:143,864,709
INFO 2026-06-08 09:19:21 MarkDuplicates Written 320,000,000 records. Elapsed time: 00:08:59s. Time for last 10,000,000: 16s. Last read position: chr9:35,095,085
INFO 2026-06-08 09:19:38 MarkDuplicates Written 330,000,000 records. Elapsed time: 00:09:16s. Time for last 10,000,000: 17s. Last read position: chr9:127,661,102
INFO 2026-06-08 09:19:56 MarkDuplicates Written 340,000,000 records. Elapsed time: 00:09:33s. Time for last 10,000,000: 17s. Last read position: chr10:16,752,622
INFO 2026-06-08 09:20:13 MarkDuplicates Written 350,000,000 records. Elapsed time: 00:09:51s. Time for last 10,000,000: 17s. Last read position: chr10:99,929,749
INFO 2026-06-08 09:20:30 MarkDuplicates Written 360,000,000 records. Elapsed time: 00:10:08s. Time for last 10,000,000: 16s. Last read position: chr11:1,249,195
INFO 2026-06-08 09:20:47 MarkDuplicates Written 370,000,000 records. Elapsed time: 00:10:25s. Time for last 10,000,000: 17s. Last read position: chr11:62,520,220
INFO 2026-06-08 09:21:04 MarkDuplicates Written 380,000,000 records. Elapsed time: 00:10:42s. Time for last 10,000,000: 16s. Last read position: chr11:68,936,745
INFO 2026-06-08 09:21:21 MarkDuplicates Written 390,000,000 records. Elapsed time: 00:10:59s. Time for last 10,000,000: 17s. Last read position: chr11:130,190,595
INFO 2026-06-08 09:21:38 MarkDuplicates Written 400,000,000 records. Elapsed time: 00:11:16s. Time for last 10,000,000: 16s. Last read position: chr12:51,913,243
INFO 2026-06-08 09:21:55 MarkDuplicates Written 410,000,000 records. Elapsed time: 00:11:33s. Time for last 10,000,000: 16s. Last read position: chr12:69,588,202
INFO 2026-06-08 09:22:11 MarkDuplicates Written 420,000,000 records. Elapsed time: 00:11:49s. Time for last 10,000,000: 16s. Last read position: chr12:131,894,857
INFO 2026-06-08 09:22:29 MarkDuplicates Written 430,000,000 records. Elapsed time: 00:12:06s. Time for last 10,000,000: 17s. Last read position: chr14:22,877,213
INFO 2026-06-08 09:22:46 MarkDuplicates Written 440,000,000 records. Elapsed time: 00:12:24s. Time for last 10,000,000: 17s. Last read position: chr14:94,079,281
INFO 2026-06-08 09:23:03 MarkDuplicates Written 450,000,000 records. Elapsed time: 00:12:40s. Time for last 10,000,000: 16s. Last read position: chr15:34,943,067
INFO 2026-06-08 09:23:20 MarkDuplicates Written 460,000,000 records. Elapsed time: 00:12:58s. Time for last 10,000,000: 17s. Last read position: chr15:76,795,337
INFO 2026-06-08 09:23:37 MarkDuplicates Written 470,000,000 records. Elapsed time: 00:13:15s. Time for last 10,000,000: 16s. Last read position: chr16:2,766,996
INFO 2026-06-08 09:23:54 MarkDuplicates Written 480,000,000 records. Elapsed time: 00:13:31s. Time for last 10,000,000: 16s. Last read position: chr16:18,838,422
INFO 2026-06-08 09:24:11 MarkDuplicates Written 490,000,000 records. Elapsed time: 00:13:48s. Time for last 10,000,000: 16s. Last read position: chr16:30,070,241
INFO 2026-06-08 09:24:27 MarkDuplicates Written 500,000,000 records. Elapsed time: 00:14:05s. Time for last 10,000,000: 16s. Last read position: chr16:67,879,415
INFO 2026-06-08 09:24:44 MarkDuplicates Written 510,000,000 records. Elapsed time: 00:14:22s. Time for last 10,000,000: 16s. Last read position: chr17:5,023,800
INFO 2026-06-08 09:25:01 MarkDuplicates Written 520,000,000 records. Elapsed time: 00:14:39s. Time for last 10,000,000: 17s. Last read position: chr17:39,653,617
INFO 2026-06-08 09:25:18 MarkDuplicates Written 530,000,000 records. Elapsed time: 00:14:56s. Time for last 10,000,000: 16s. Last read position: chr17:50,186,849
INFO 2026-06-08 09:25:35 MarkDuplicates Written 540,000,000 records. Elapsed time: 00:15:13s. Time for last 10,000,000: 16s. Last read position: chr17:50,196,182
INFO 2026-06-08 09:25:52 MarkDuplicates Written 550,000,000 records. Elapsed time: 00:15:30s. Time for last 10,000,000: 16s. Last read position: chr17:67,924,577
INFO 2026-06-08 09:26:10 MarkDuplicates Written 560,000,000 records. Elapsed time: 00:15:48s. Time for last 10,000,000: 17s. Last read position: chr17:81,996,788
INFO 2026-06-08 09:26:27 MarkDuplicates Written 570,000,000 records. Elapsed time: 00:16:05s. Time for last 10,000,000: 17s. Last read position: chr19:3,110,219
INFO 2026-06-08 09:26:44 MarkDuplicates Written 580,000,000 records. Elapsed time: 00:16:22s. Time for last 10,000,000: 17s. Last read position: chr19:14,097,436
INFO 2026-06-08 09:27:01 MarkDuplicates Written 590,000,000 records. Elapsed time: 00:16:39s. Time for last 10,000,000: 16s. Last read position: chr19:38,647,847
INFO 2026-06-08 09:27:18 MarkDuplicates Written 600,000,000 records. Elapsed time: 00:16:56s. Time for last 10,000,000: 16s. Last read position: chr19:44,873,953
INFO 2026-06-08 09:27:35 MarkDuplicates Written 610,000,000 records. Elapsed time: 00:17:13s. Time for last 10,000,000: 17s. Last read position: chr19:55,499,963
INFO 2026-06-08 09:27:52 MarkDuplicates Written 620,000,000 records. Elapsed time: 00:17:30s. Time for last 10,000,000: 17s. Last read position: chr20:34,072,281
INFO 2026-06-08 09:28:09 MarkDuplicates Written 630,000,000 records. Elapsed time: 00:17:47s. Time for last 10,000,000: 17s. Last read position: chr20:51,690,743
INFO 2026-06-08 09:28:25 MarkDuplicates Written 640,000,000 records. Elapsed time: 00:18:03s. Time for last 10,000,000: 15s. Last read position: chr21:8,399,904
INFO 2026-06-08 09:28:41 MarkDuplicates Written 650,000,000 records. Elapsed time: 00:18:19s. Time for last 10,000,000: 16s. Last read position: chr22:20,993,729
INFO 2026-06-08 09:28:58 MarkDuplicates Written 660,000,000 records. Elapsed time: 00:18:36s. Time for last 10,000,000: 16s. Last read position: chr22:40,861,636
INFO 2026-06-08 09:29:15 MarkDuplicates Written 670,000,000 records. Elapsed time: 00:18:53s. Time for last 10,000,000: 17s. Last read position: chrX:48,575,643
INFO 2026-06-08 09:29:32 MarkDuplicates Written 680,000,000 records. Elapsed time: 00:19:10s. Time for last 10,000,000: 17s. Last read position: chrX:149,549,468
INFO 2026-06-08 09:29:48 MarkDuplicates Written 690,000,000 records. Elapsed time: 00:19:26s. Time for last 10,000,000: 15s. Last read position: KI270733.1:133,193
INFO 2026-06-08 09:30:00 MarkDuplicates Writing complete. Closing input iterator.
INFO 2026-06-08 09:30:00 MarkDuplicates Duplicate Index cleanup.
INFO 2026-06-08 09:30:00 MarkDuplicates Getting Memory Stats.
INFO 2026-06-08 09:30:01 MarkDuplicates Before output close freeMemory: 203106576; totalMemory: 234881024; maxMemory: 63585648640
INFO 2026-06-08 09:30:01 MarkDuplicates Closed outputs. Getting more Memory Stats.
INFO 2026-06-08 09:30:01 MarkDuplicates After output close freeMemory: 104006360; totalMemory: 134217728; maxMemory: 63585648640
[Mon Jun 08 09:30:01 GMT 2026] picard.sam.markduplicates.MarkDuplicates done. Elapsed time: 51.42 minutes.
Runtime.totalMemory()=134217728
ls: *cram: No such file or directory
ls: *.crai: No such file or directory