Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/9432b492030b76af3248c3b7e8a412/1173_CRX_T1_RNA_SLD_01_A23T55JLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c9/a468fe33321ec2f592004e83ccc3bc/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c9/a468fe33321ec2f592004e83ccc3bc/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory