File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/f3684ff1708f57cf968aa20a1ed07f/.command.log
Size
115.1 KB
Attempt
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/f3684ff1708f57cf968aa20a1ed07f/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/f3684ff1708f57cf968aa20a1ed07f/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/84/75778d05f205cfd6970279482d9d4b/1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/32835e8381277c3acaa0a2d7df5f2a/1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/32835e8381277c3acaa0a2d7df5f2a/1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2_1.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.G8zIe4acAB/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.G8zIe4acAB/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary
-sample contains 286230301 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.G8zIe4acAB/ctat_genome_lib_build_dir  -J /tmp/nxf.G8zIe4acAB/1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction  -O /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.G8zIe4acAB/1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.G8zIe4acAB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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-building interval tree based on /tmp/nxf.G8zIe4acAB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2690000], rate=41-building interval tree based on /tmp/nxf.G8zIe4acAB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=35294.12/min 
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[3510000], rate=46306.07/min 
[3520000], rate=46376.81/min 
[3530000], rate=46427.01/min -building interval tree based on /tmp/nxf.G8zIe4acAB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=85714.29/min 
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[2700889.44/min 
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[3100000], rate=43255.81/min 
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[3200000], rate=43825.61/min 
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[3490000], rate=41489.99/min 
[3500000], rate=41477.38/min 
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[3520000], rate=41428.01/min [2720000], rate=41337.39/min 
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[2740000], rate=40642.77/min 
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[3100000], rate=39888.48/min 
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[3500000], rate=41039.67/min 
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[3520000], rate=41161.57/min 
[3530000], rate=41222.27/min 
[3540000], rate=41186.74/min 000], rate=32162.00/min 
[2710000], rate=32210.78/min 
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[3100000], rate=33991.23/min 
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[3270000], rate=34719.52/min 
[3280000], rate=34770.32/min 
[3290000], rate=34827.10/min 
[3300000], rate=34889.87/min 
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[3320000], rate=35014.94/min 
[3330000], rate=35077.25/min 
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[3400000], rate=35540.07/min 
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[3420000], rate=35680.75/min 
[3430000], rate=35754.00/min 
[3440000], rate=35827.11/min 
[3450000], rate=35893.88/min 
[3460000], rate=35960.51/min 
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[3480000], rate=36080.87/min 
[3490000], rate=36140.84/min 
[3500000], rate=36200.66/min 
[3510000], rate=36260.33/min 
[3520000], rate=36326.11/min 
[3530000], rate=36391.75/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.G8zIe4acAB/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
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 4666666.67 reads per min processed...  
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 3916666.67 reads per min processed...  
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 3920000.00 reads per min processed...  
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 3923076.92 reads per min processed...  
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 3978260.87 reads per min processed...  
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 4000000.00 reads per min processed...  
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 4163265.31 reads per min processed...  
 4181818.18 reads per min processed...  
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 4128440.37 reads per min processed...  
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 4133333.33 reads per min processed...  
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 4157142.86 reads per min processed...  
 4170212.77 reads per min processed...  
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 4166666.67 reads per min processed...  
 4179310.34 reads per min processed...  
 4163265.31 reads per min processed...  
 4175675.68 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.G8zIe4acAB/1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.G8zIe4acAB/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -1788079.575228
EM: Round [1] log likelihood: -1787448.575171
EM: Round [2] log likelihood: -1787242.554346
EM: Round [3] log likelihood: -1787149.557316
EM: Round [4] log likelihood: -1787101.310882
EM: Round [5] log likelihood: -1787074.156266
EM: Round [6] log likelihood: -1787057.912497
EM: Round [7] log likelihood: -1787047.647364
EM: Round [8] log likelihood: -1787040.813307
EM: Round [9] log likelihood: -1787036.038383
EM: Round [10] log likelihood: -1787032.555855
EM: Round [11] log likelihood: -1787029.920612
EM: Round [12] log likelihood: -1787027.863935
EM: Round [13] log likelihood: -1787026.217128
EM: Round [14] log likelihood: -1787024.870235
EM: Round [15] log likelihood: -1787023.749026
EM: Round [16] log likelihood: -1787022.801779
EM: Round [17] log likelihood: -1787021.991417
EM: Round [18] log likelihood: -1787021.290693
EM: Round [19] log likelihood: -1787020.679148
EM: Round [20] log likelihood: -1787020.141118
EM: Round [21] log likelihood: -1787019.664415
EM: Round [22] log likelihood: -1787019.239409
EM: Round [23] log likelihood: -1787018.858392
EM: Round [24] log likelihood: -1787018.515117
EM: Round [25] log likelihood: -1787018.204473
EM: Round [26] log likelihood: -1787017.922228
EM: Round [27] log likelihood: -1787017.664856
EM: Round [28] log likelihood: -1787017.429385
EM: Round [29] log likelihood: -1787017.213301
EM: Round [30] log likelihood: -1787017.014454
EM: Round [31] log likelihood: -1787016.830998
EM: Round [32] log likelihood: -1787016.661340
EM: Round [33] log likelihood: -1787016.504095
EM: Round [34] log likelihood: -1787016.358052
EM: Round [35] log likelihood: -1787016.222152
EM: Round [36] log likelihood: -1787016.095459
EM: Round [37] log likelihood: -1787015.977148
EM: Round [38] log likelihood: -1787015.866485
EM: Round [39] log likelihood: -1787015.762817
EM: Round [40] log likelihood: -1787015.665562
EM: Round [41] log likelihood: -1787015.574195
EM: Round [42] log likelihood: -1787015.488247
EM: Round [43] log likelihood: -1787015.407296
EM: Round [44] log likelihood: -1787015.330958
EM: Round [45] log likelihood: -1787015.258888
EM: Round [46] log likelihood: -1787015.190772
EM: Round [47] log likelihood: -1787015.126324
EM: Round [48] log likelihood: -1787015.065285
EM: Round [49] log likelihood: -1787015.007417
EM: Round [50] log likelihood: -1787014.952504
EM: Round [51] log likelihood: -1787014.900347
EM: Round [52] log likelihood: -1787014.850764
EM: Round [53] log likelihood: -1787014.803588
EM: Round [54] log likelihood: -1787014.758665
EM: Round [55] log likelihood: -1787014.715853
EM: Round [56] log likelihood: -1787014.675021
EM: Round [57] log likelihood: -1787014.636049
EM: Round [58] log likelihood: -1787014.598825
EM: Round [59] log likelihood: -1787014.563245
EM: Round [60] log likelihood: -1787014.529215
EM: Round [61] log likelihood: -1787014.496644
EM: Round [62] log likelihood: -1787014.465450
EM: Round [63] log likelihood: -1787014.435557
EM: Round [64] log likelihood: -1787014.406892
EM: Round [65] log likelihood: -1787014.379390
EM: Round [66] log likelihood: -1787014.352988
EM: Round [67] log likelihood: -1787014.327628
EM: Round [68] log likelihood: -1787014.303255
EM: Round [69] log likelihood: -1787014.279820
EM: Round [70] log likelihood: -1787014.257274
EM: Round [71] log likelihood: -1787014.235574
EM: Round [72] log likelihood: -1787014.214677
EM: Round [73] log likelihood: -1787014.194544
EM: Round [74] log likelihood: -1787014.175139
EM: Round [75] log likelihood: -1787014.156427
EM: Round [76] log likelihood: -1787014.138376
EM: Round [77] log likelihood: -1787014.120955
EM: Round [78] log likelihood: -1787014.104135
EM: Round [79] log likelihood: -1787014.087889
EM: Round [80] log likelihood: -1787014.072192
EM: Round [81] log likelihood: -1787014.057019
EM: Round [82] log likelihood: -1787014.042347
EM: Round [83] log likelihood: -1787014.028156
EM: Round [84] log likelihood: -1787014.014424
EM: Round [85] log likelihood: -1787014.001133
EM: Round [86] log likelihood: -1787013.988263
EM: Round [87] log likelihood: -1787013.975798
EM: Round [88] log likelihood: -1787013.963722
EM: Round [89] log likelihood: -1787013.952018
EM: Round [90] log likelihood: -1787013.940672
EM: Round [91] log likelihood: -1787013.929669
EM: Round [92] log likelihood: -1787013.918997
EM: Round [93] log likelihood: -1787013.908643
EM: Round [94] log likelihood: -1787013.898594
EM: Round [95] log likelihood: -1787013.888840
EM: Round [96] log likelihood: -1787013.879368
EM: Round [97] log likelihood: -1787013.870170
EM: Round [98] log likelihood: -1787013.861234
EM: Round [99] log likelihood: -1787013.852551
EM: Round [100] log likelihood: -1787013.844112
EM: Round [101] log likelihood: -1787013.835909
EM: Round [102] log likelihood: -1787013.827932
EM: Round [103] log likelihood: -1787013.820175
EM: Round [104] log likelihood: -1787013.812630
EM: Round [105] log likelihood: -1787013.805289
EM: Round [106] log likelihood: -1787013.798146
EM: Round [107] log likelihood: -1787013.791193
EM: Round [108] log likelihood: -1787013.784425
EM: Round [109] log likelihood: -1787013.777835
EM: Round [110] log likelihood: -1787013.771417
EM: Round [111] log likelihood: -1787013.765167
EM: Round [112] log likelihood: -1787013.759078
EM: Round [113] log likelihood: -1787013.753145
EM: Round [114] log likelihood: -1787013.747363
EM: Round [115] log likelihood: -1787013.741728
EM: Round [116] log likelihood: -1787013.736235
EM: Round [117] log likelihood: -1787013.730880
EM: Round [118] log likelihood: -1787013.725658
EM: Round [119] log likelihood: -1787013.720565
EM: Round [120] log likelihood: -1787013.715597
EM: Round [121] log likelihood: -1787013.710751
EM: Round [122] log likelihood: -1787013.706022
EM: Round [123] log likelihood: -1787013.701408
EM: Round [124] log likelihood: -1787013.696905
EM: Round [125] log likelihood: -1787013.692509
EM: Round [126] log likelihood: -1787013.688218
EM: Round [127] log likelihood: -1787013.684029
EM: Round [128] log likelihood: -1787013.679938
EM: Round [129] log likelihood: -1787013.675942
EM: Round [130] log likelihood: -1787013.672040
EM: Round [131] log likelihood: -1787013.668228
EM: Round [132] log likelihood: -1787013.664504
EM: Round [133] log likelihood: -1787013.660865
EM: Round [134] log likelihood: -1787013.657309
EM: Round [135] log likelihood: -1787013.653833
EM: Round [136] log likelihood: -1787013.650436
EM: Round [137] log likelihood: -1787013.647116
EM: Round [138] log likelihood: -1787013.643869
EM: Round [139] log likelihood: -1787013.640695
EM: Round [140] log likelihood: -1787013.637591
EM: Round [141] log likelihood: -1787013.634555
EM: Round [142] log likelihood: -1787013.631586
EM: Round [143] log likelihood: -1787013.628681
EM: Round [144] log likelihood: -1787013.625840
EM: Round [145] log likelihood: -1787013.623059
EM: Round [146] log likelihood: -1787013.620339
EM: Round [147] log likelihood: -1787013.617677
EM: Round [148] log likelihood: -1787013.615071
EM: Round [149] log likelihood: -1787013.612521
EM: Round [150] log likelihood: -1787013.610024
EM: Round [151] log likelihood: -1787013.607580
EM: Round [152] log likelihood: -1787013.605187
EM: Round [153] log likelihood: -1787013.602844
EM: Round [154] log likelihood: -1787013.600549
EM: Round [155] log likelihood: -1787013.598302
EM: Round [156] log likelihood: -1787013.596101
EM: Round [157] log likelihood: -1787013.593945
EM: Round [158] log likelihood: -1787013.591832
EM: Round [159] log likelihood: -1787013.589763
EM: Round [160] log likelihood: -1787013.587735
EM: Round [161] log likelihood: -1787013.585748
EM: Round [162] log likelihood: -1787013.583800
EM: Round [163] log likelihood: -1787013.581892
EM: Round [164] log likelihood: -1787013.580021
EM: Round [165] log likelihood: -1787013.578187
EM: Round [166] log likelihood: -1787013.576389
EM: Round [167] log likelihood: -1787013.574626
EM: Round [168] log likelihood: -1787013.572898
EM: Round [169] log likelihood: -1787013.571203
EM: Round [170] log likelihood: -1787013.569541
EM: Round [171] log likelihood: -1787013.567910
EM: Round [172] log likelihood: -1787013.566311
EM: Round [173] log likelihood: -1787013.564743
EM: Round [174] log likelihood: -1787013.563204
EM: Round [175] log likelihood: -1787013.561695
EM: Round [176] log likelihood: -1787013.560213
EM: Round [177] log likelihood: -1787013.558760
EM: Round [178] log likelihood: -1787013.557334
EM: Round [179] log likelihood: -1787013.555934
EM: Round [180] log likelihood: -1787013.554560
EM: Round [181] log likelihood: -1787013.553211
EM: Round [182] log likelihood: -1787013.551887
EM: Round [183] log likelihood: -1787013.550588
EM: Round [184] log likelihood: -1787013.549312
EM: Round [185] log likelihood: -1787013.548059
EM: Round [186] log likelihood: -1787013.546829
EM: Round [187] log likelihood: -1787013.545621
EM: Round [188] log likelihood: -1787013.544435
EM: Round [189] log likelihood: -1787013.543269
EM: Round [190] log likelihood: -1787013.542125
EM: Round [191] log likelihood: -1787013.541001
EM: Round [192] log likelihood: -1787013.539896
EM: Round [193] log likelihood: -1787013.538811
EM: Round [194] log likelihood: -1787013.537745
EM: Round [195] log likelihood: -1787013.536698
EM: Round [196] log likelihood: -1787013.535669
EM: Round [197] log likelihood: -1787013.534657
EM: Round [198] log likelihood: -1787013.533663
EM: Round [199] log likelihood: -1787013.532686
EM: Round [200] log likelihood: -1787013.531726
EM: Round [201] log likelihood: -1787013.530782
EM: Round [202] log likelihood: -1787013.529854
EM: Round [203] log likelihood: -1787013.528942
EM: Round [204] log likelihood: -1787013.528045
EM: Round [205] log likelihood: -1787013.527163
EM: Round [206] log likelihood: -1787013.526296
EM: Round [207] log likelihood: -1787013.525443
EM: Round [208] log likelihood: -1787013.524605
EM: Round [209] log likelihood: -1787013.523780
EM: Round [210] log likelihood: -1787013.522969
EM: Round [211] log likelihood: -1787013.522171
EM: Round [212] log likelihood: -1787013.521386
EM: Round [213] log likelihood: -1787013.520614
EM: Round [214] log likelihood: -1787013.519855
EM: Round [215] log likelihood: -1787013.519108
EM: Round [216] log likelihood: -1787013.518373
EM: Round [217] log likelihood: -1787013.517649
EM: Round [218] log likelihood: -1787013.516938
EM: Round [219] log likelihood: -1787013.516237
EM: Round [220] log likelihood: -1787013.515548
EM: Round [221] log likelihood: -1787013.514869
EM: Round [222] log likelihood: -1787013.514202
EM: Round [223] log likelihood: -1787013.513544
EM: Round [224] log likelihood: -1787013.512898
EM: Round [225] log likelihood: -1787013.512261
EM: Round [226] log likelihood: -1787013.511634
EM: Round [227] log likelihood: -1787013.511017
EM: Round [228] log likelihood: -1787013.510409
EM: Round [229] log likelihood: -1787013.509811
EM: Round [230] log likelihood: -1787013.509222
EM: Round [231] log likelihood: -1787013.508641
EM: Round [232] log likelihood: -1787013.508070
EM: Round [233] log likelihood: -1787013.507508
EM: Round [234] log likelihood: -1787013.506954
EM: Round [235] log likelihood: -1787013.506408
EM: Round [236] log likelihood: -1787013.505870
EM: Round [237] log likelihood: -1787013.505341
EM: Round [238] log likelihood: -1787013.504820
EM: Round [239] log likelihood: -1787013.504306
EM: Round [240] log likelihood: -1787013.503800
EM: Round [241] log likelihood: -1787013.503301
EM: Round [242] log likelihood: -1787013.502810
EM: Round [243] log likelihood: -1787013.502326
EM: Round [244] log likelihood: -1787013.501849
EM: Round [245] log likelihood: -1787013.501379
EM: Round [246] log likelihood: -1787013.500916
EM: Round [247] log likelihood: -1787013.500460
EM: Round [248] log likelihood: -1787013.500010
EM: Round [249] log likelihood: -1787013.499567
EM: Round [250] log likelihood: -1787013.499131
EM: Round [251] log likelihood: -1787013.498700
EM: Round [252] log likelihood: -1787013.498276
EM: Round [253] log likelihood: -1787013.497858
EM: Round [254] log likelihood: -1787013.497445
EM: Round [255] log likelihood: -1787013.497039
EM: Round [256] log likelihood: -1787013.496638
EM: Round [257] log likelihood: -1787013.496244
EM: Round [258] log likelihood: -1787013.495854
EM: Round [259] log likelihood: -1787013.495470
EM: Round [260] log likelihood: -1787013.495092
EM: Round [261] log likelihood: -1787013.494719
EM: Round [262] log likelihood: -1787013.494351
EM: Round [263] log likelihood: -1787013.493988
EM: Round [264] log likelihood: -1787013.493630
EM: Round [265] log likelihood: -1787013.493277
EM: Round [266] log likelihood: -1787013.492929
EM: Round [267] log likelihood: -1787013.492586
EM: Round [268] log likelihood: -1787013.492248
EM: Round [269] log likelihood: -1787013.491914
EM: Round [270] log likelihood: -1787013.491585
EM: Round [271] log likelihood: -1787013.491260
EM: Round [272] log likelihood: -1787013.490940
EM: Round [273] log likelihood: -1787013.490624
EM: Round [274] log likelihood: -1787013.490312
EM: Round [275] log likelihood: -1787013.490005
EM: Round [276] log likelihood: -1787013.489701
EM: Round [277] log likelihood: -1787013.489402
EM: Round [278] log likelihood: -1787013.489107
EM: Round [279] log likelihood: -1787013.488816
EM: Round [280] log likelihood: -1787013.488529
EM: Round [281] log likelihood: -1787013.488245
EM: Round [282] log likelihood: -1787013.487966
EM: Round [283] log likelihood: -1787013.487690
EM: Round [284] log likelihood: -1787013.487417
EM: Round [285] log likelihood: -1787013.487149
EM: Round [286] log likelihood: -1787013.486883
EM: Round [287] log likelihood: -1787013.486622
EM: Round [288] log likelihood: -1787013.486364
EM: Round [289] log likelihood: -1787013.486109
EM: Round [290] log likelihood: -1787013.485857
EM: Round [291] log likelihood: -1787013.485609
EM: Round [292] log likelihood: -1787013.485364
EM: Round [293] log likelihood: -1787013.485122
EM: Round [294] log likelihood: -1787013.484884
EM: Round [295] log likelihood: -1787013.484648
EM: Round [296] log likelihood: -1787013.484416
EM: Round [297] log likelihood: -1787013.484187
EM: Round [298] log likelihood: -1787013.483960
EM: Round [299] log likelihood: -1787013.483737
EM: Round [300] log likelihood: -1787013.483516
EM: Round [301] log likelihood: -1787013.483298
EM: Round [302] log likelihood: -1787013.483083
EM: Round [303] log likelihood: -1787013.482871
EM: Round [304] log likelihood: -1787013.482661
EM: Round [305] log likelihood: -1787013.482454
EM: Round [306] log likelihood: -1787013.482250
EM: Round [307] log likelihood: -1787013.482048
EM: Round [308] log likelihood: -1787013.481849
EM: Round [309] log likelihood: -1787013.481653
EM: Round [310] log likelihood: -1787013.481459
EM: Round [311] log likelihood: -1787013.481267
EM: Round [312] log likelihood: -1787013.481078
EM: Round [313] log likelihood: -1787013.480891
EM: Round [314] log likelihood: -1787013.480707
EM: Round [315] log likelihood: -1787013.480524
EM: Round [316] log likelihood: -1787013.480345
EM: Round [317] log likelihood: -1787013.480167
EM: Round [318] log likelihood: -1787013.479992
EM: Round [319] log likelihood: -1787013.479818
EM: Round [320] log likelihood: -1787013.479647
EM: Round [321] log likelihood: -1787013.479478
EM: Round [322] log likelihood: -1787013.479312
EM: Round [323] log likelihood: -1787013.479147
EM: Round [324] log likelihood: -1787013.478984
EM: Round [325] log likelihood: -1787013.478824
EM: Round [326] log likelihood: -1787013.478665
EM: Round [327] log likelihood: -1787013.478508
EM: Round [328] log likelihood: -1787013.478354
EM: Round [329] log likelihood: -1787013.478201
EM: Round [330] log likelihood: -1787013.478050
EM: Round [331] log likelihood: -1787013.477901
EM: Round [332] log likelihood: -1787013.477753
EM: Round [333] log likelihood: -1787013.477608
EM: Round [334] log likelihood: -1787013.477464
EM: Round [335] log likelihood: -1787013.477322
EM: Round [336] log likelihood: -1787013.477182
EM: Round [337] log likelihood: -1787013.477043
EM: Round [338] log likelihood: -1787013.476907
EM: Round [339] log likelihood: -1787013.476772
EM: Round [340] log likelihood: -1787013.476638
EM: Round [341] log likelihood: -1787013.476506
EM: Round [342] log likelihood: -1787013.476376
EM: Round [343] log likelihood: -1787013.476247
EM: Round [344] log likelihood: -1787013.476120
EM: Round [345] log likelihood: -1787013.475995
EM: Round [346] log likelihood: -1787013.475871
EM: Round [347] log likelihood: -1787013.475748
EM: Round [348] log likelihood: -1787013.475627
EM: Round [349] log likelihood: -1787013.475507
EM: Round [350] log likelihood: -1787013.475389
EM: Round [351] log likelihood: -1787013.475272
EM: Round [352] log likelihood: -1787013.475157
EM: Round [353] log likelihood: -1787013.475043
EM: Round [354] log likelihood: -1787013.474931
EM: Round [355] log likelihood: -1787013.474819
EM: Round [356] log likelihood: -1787013.474709
EM: Round [357] log likelihood: -1787013.474601
EM: Round [358] log likelihood: -1787013.474494
EM: Round [359] log likelihood: -1787013.474388
EM: Round [360] log likelihood: -1787013.474283
EM: Round [361] log likelihood: -1787013.474179
EM: Round [362] log likelihood: -1787013.474077
EM: Round [363] log likelihood: -1787013.473976
EM: Round [364] log likelihood: -1787013.473876
EM: Stopping iterations at round 364 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -1782609.897782
EM: Round [1] log likelihood: -1782176.347021
EM: Round [2] log likelihood: -1782032.451942
EM: Round [3] log likelihood: -1781968.312507
EM: Round [4] log likelihood: -1781935.674131
EM: Round [5] log likelihood: -1781917.735030
EM: Round [6] log likelihood: -1781907.277143
EM: Round [7] log likelihood: -1781900.840037
EM: Round [8] log likelihood: -1781896.664507
EM: Round [9] log likelihood: -1781893.818715
EM: Round [10] log likelihood: -1781891.790045
EM: Round [11] log likelihood: -1781890.285501
EM: Round [12] log likelihood: -1781889.131018
EM: Round [13] log likelihood: -1781888.219171
EM: Round [14] log likelihood: -1781887.481184
EM: Round [15] log likelihood: -1781886.871493
EM: Round [16] log likelihood: -1781886.358940
EM: Round [17] log likelihood: -1781885.921610
EM: Round [18] log likelihood: -1781885.543694
EM: Round [19] log likelihood: -1781885.213525
EM: Round [20] log likelihood: -1781884.922325
EM: Round [21] log likelihood: -1781884.663370
EM: Round [22] log likelihood: -1781884.431425
EM: Round [23] log likelihood: -1781884.222356
EM: Round [24] log likelihood: -1781884.032857
EM: Round [25] log likelihood: -1781883.860248
EM: Round [26] log likelihood: -1781883.702338
EM: Round [27] log likelihood: -1781883.557310
EM: Round [28] log likelihood: -1781883.423648
EM: Round [29] log likelihood: -1781883.300074
EM: Round [30] log likelihood: -1781883.185503
EM: Round [31] log likelihood: -1781883.079004
EM: Round [32] log likelihood: -1781882.979776
EM: Round [33] log likelihood: -1781882.887124
EM: Round [34] log likelihood: -1781882.800439
EM: Round [35] log likelihood: -1781882.719190
EM: Round [36] log likelihood: -1781882.642906
EM: Round [37] log likelihood: -1781882.571171
EM: Round [38] log likelihood: -1781882.503614
EM: Round [39] log likelihood: -1781882.439904
EM: Round [40] log likelihood: -1781882.379745
EM: Round [41] log likelihood: -1781882.322869
EM: Round [42] log likelihood: -1781882.269035
EM: Round [43] log likelihood: -1781882.218026
EM: Round [44] log likelihood: -1781882.169643
EM: Round [45] log likelihood: -1781882.123707
EM: Round [46] log likelihood: -1781882.080053
EM: Round [47] log likelihood: -1781882.038532
EM: Round [48] log likelihood: -1781881.999006
EM: Round [49] log likelihood: -1781881.961348
EM: Round [50] log likelihood: -1781881.925444
EM: Round [51] log likelihood: -1781881.891186
EM: Round [52] log likelihood: -1781881.858476
EM: Round [53] log likelihood: -1781881.827223
EM: Round [54] log likelihood: -1781881.797342
EM: Round [55] log likelihood: -1781881.768756
EM: Round [56] log likelihood: -1781881.741393
EM: Round [57] log likelihood: -1781881.715184
EM: Round [58] log likelihood: -1781881.690068
EM: Round [59] log likelihood: -1781881.665985
EM: Round [60] log likelihood: -1781881.642883
EM: Round [61] log likelihood: -1781881.620709
EM: Round [62] log likelihood: -1781881.599416
EM: Round [63] log likelihood: -1781881.578961
EM: Round [64] log likelihood: -1781881.559301
EM: Round [65] log likelihood: -1781881.540397
EM: Round [66] log likelihood: -1781881.522213
EM: Round [67] log likelihood: -1781881.504714
EM: Round [68] log likelihood: -1781881.487869
EM: Round [69] log likelihood: -1781881.471646
EM: Round [70] log likelihood: -1781881.456017
EM: Round [71] log likelihood: -1781881.440956
EM: Round [72] log likelihood: -1781881.426436
EM: Round [73] log likelihood: -1781881.412434
EM: Round [74] log likelihood: -1781881.398927
EM: Round [75] log likelihood: -1781881.385893
EM: Round [76] log likelihood: -1781881.373313
EM: Round [77] log likelihood: -1781881.361167
EM: Round [78] log likelihood: -1781881.349437
EM: Round [79] log likelihood: -1781881.338105
EM: Round [80] log likelihood: -1781881.327156
EM: Round [81] log likelihood: -1781881.316573
EM: Round [82] log likelihood: -1781881.306343
EM: Round [83] log likelihood: -1781881.296451
EM: Round [84] log likelihood: -1781881.286883
EM: Round [85] log likelihood: -1781881.277627
EM: Round [86] log likelihood: -1781881.268672
EM: Round [87] log likelihood: -1781881.260005
EM: Round [88] log likelihood: -1781881.251616
EM: Round [89] log likelihood: -1781881.243493
EM: Round [90] log likelihood: -1781881.235628
EM: Round [91] log likelihood: -1781881.228011
EM: Round [92] log likelihood: -1781881.220632
EM: Round [93] log likelihood: -1781881.213484
EM: Round [94] log likelihood: -1781881.206557
EM: Round [95] log likelihood: -1781881.199843
EM: Round [96] log likelihood: -1781881.193336
EM: Round [97] log likelihood: -1781881.187028
EM: Round [98] log likelihood: -1781881.180911
EM: Round [99] log likelihood: -1781881.174980
EM: Round [100] log likelihood: -1781881.169228
EM: Round [101] log likelihood: -1781881.163649
EM: Round [102] log likelihood: -1781881.158236
EM: Round [103] log likelihood: -1781881.152985
EM: Round [104] log likelihood: -1781881.147889
EM: Round [105] log likelihood: -1781881.142945
EM: Round [106] log likelihood: -1781881.138146
EM: Round [107] log likelihood: -1781881.133487
EM: Round [108] log likelihood: -1781881.128966
EM: Round [109] log likelihood: -1781881.124575
EM: Round [110] log likelihood: -1781881.120313
EM: Round [111] log likelihood: -1781881.116174
EM: Round [112] log likelihood: -1781881.112154
EM: Round [113] log likelihood: -1781881.108250
EM: Round [114] log likelihood: -1781881.104459
EM: Round [115] log likelihood: -1781881.100775
EM: Round [116] log likelihood: -1781881.097197
EM: Round [117] log likelihood: -1781881.093720
EM: Round [118] log likelihood: -1781881.090343
EM: Round [119] log likelihood: -1781881.087061
EM: Round [120] log likelihood: -1781881.083871
EM: Round [121] log likelihood: -1781881.080771
EM: Round [122] log likelihood: -1781881.077759
EM: Round [123] log likelihood: -1781881.074830
EM: Round [124] log likelihood: -1781881.071984
EM: Round [125] log likelihood: -1781881.069217
EM: Round [126] log likelihood: -1781881.066527
EM: Round [127] log likelihood: -1781881.063912
EM: Round [128] log likelihood: -1781881.061369
EM: Round [129] log likelihood: -1781881.058897
EM: Round [130] log likelihood: -1781881.056492
EM: Round [131] log likelihood: -1781881.054154
EM: Round [132] log likelihood: -1781881.051881
EM: Round [133] log likelihood: -1781881.049669
EM: Round [134] log likelihood: -1781881.047518
EM: Round [135] log likelihood: -1781881.045426
EM: Round [136] log likelihood: -1781881.043391
EM: Round [137] log likelihood: -1781881.041412
EM: Round [138] log likelihood: -1781881.039486
EM: Round [139] log likelihood: -1781881.037613
EM: Round [140] log likelihood: -1781881.035790
EM: Round [141] log likelihood: -1781881.034016
EM: Round [142] log likelihood: -1781881.032291
EM: Round [143] log likelihood: -1781881.030612
EM: Round [144] log likelihood: -1781881.028978
EM: Round [145] log likelihood: -1781881.027388
EM: Round [146] log likelihood: -1781881.025841
EM: Round [147] log likelihood: -1781881.024335
EM: Round [148] log likelihood: -1781881.022870
EM: Round [149] log likelihood: -1781881.021444
EM: Round [150] log likelihood: -1781881.020055
EM: Round [151] log likelihood: -1781881.018704
EM: Round [152] log likelihood: -1781881.017389
EM: Round [153] log likelihood: -1781881.016109
EM: Round [154] log likelihood: -1781881.014862
EM: Round [155] log likelihood: -1781881.013649
EM: Round [156] log likelihood: -1781881.012468
EM: Round [157] log likelihood: -1781881.011318
EM: Round [158] log likelihood: -1781881.010198
EM: Round [159] log likelihood: -1781881.009108
EM: Round [160] log likelihood: -1781881.008047
EM: Round [161] log likelihood: -1781881.007013
EM: Round [162] log likelihood: -1781881.006007
EM: Round [163] log likelihood: -1781881.005027
EM: Round [164] log likelihood: -1781881.004073
EM: Round [165] log likelihood: -1781881.003144
EM: Round [166] log likelihood: -1781881.002239
EM: Round [167] log likelihood: -1781881.001358
EM: Round [168] log likelihood: -1781881.000499
EM: Round [169] log likelihood: -1781880.999663
EM: Round [170] log likelihood: -1781880.998849
EM: Round [171] log likelihood: -1781880.998056
EM: Round [172] log likelihood: -1781880.997284
EM: Round [173] log likelihood: -1781880.996531
EM: Round [174] log likelihood: -1781880.995798
EM: Round [175] log likelihood: -1781880.995085
EM: Round [176] log likelihood: -1781880.994389
EM: Round [177] log likelihood: -1781880.993712
EM: Round [178] log likelihood: -1781880.993052
EM: Round [179] log likelihood: -1781880.992409
EM: Round [180] log likelihood: -1781880.991782
EM: Round [181] log likelihood: -1781880.991172
EM: Round [182] log likelihood: -1781880.990577
EM: Round [183] log likelihood: -1781880.989998
EM: Round [184] log likelihood: -1781880.989433
EM: Round [185] log likelihood: -1781880.988883
EM: Round [186] log likelihood: -1781880.988347
EM: Round [187] log likelihood: -1781880.987825
EM: Round [188] log likelihood: -1781880.987316
EM: Round [189] log likelihood: -1781880.986820
EM: Round [190] log likelihood: -1781880.986336
EM: Round [191] log likelihood: -1781880.985865
EM: Round [192] log likelihood: -1781880.985406
EM: Round [193] log likelihood: -1781880.984959
EM: Round [194] log likelihood: -1781880.984523
EM: Round [195] log likelihood: -1781880.984098
EM: Round [196] log likelihood: -1781880.983683
EM: Round [197] log likelihood: -1781880.983279
EM: Round [198] log likelihood: -1781880.982886
EM: Round [199] log likelihood: -1781880.982502
EM: Round [200] log likelihood: -1781880.982128
EM: Round [201] log likelihood: -1781880.981764
EM: Round [202] log likelihood: -1781880.981408
EM: Round [203] log likelihood: -1781880.981062
EM: Round [204] log likelihood: -1781880.980724
EM: Round [205] log likelihood: -1781880.980395
EM: Round [206] log likelihood: -1781880.980074
EM: Round [207] log likelihood: -1781880.979760
EM: Round [208] log likelihood: -1781880.979455
EM: Round [209] log likelihood: -1781880.979158
EM: Round [210] log likelihood: -1781880.978867
EM: Round [211] log likelihood: -1781880.978585
EM: Round [212] log likelihood: -1781880.978309
EM: Round [213] log likelihood: -1781880.978040
EM: Round [214] log likelihood: -1781880.977777
EM: Round [215] log likelihood: -1781880.977521
EM: Round [216] log likelihood: -1781880.977272
EM: Round [217] log likelihood: -1781880.977028
EM: Round [218] log likelihood: -1781880.976791
EM: Round [219] log likelihood: -1781880.976560
EM: Round [220] log likelihood: -1781880.976334
EM: Round [221] log likelihood: -1781880.976114
EM: Round [222] log likelihood: -1781880.975899
EM: Round [223] log likelihood: -1781880.975689
EM: Round [224] log likelihood: -1781880.975485
EM: Round [225] log likelihood: -1781880.975286
EM: Round [226] log likelihood: -1781880.975091
EM: Round [227] log likelihood: -1781880.974901
EM: Round [228] log likelihood: -1781880.974716
EM: Round [229] log likelihood: -1781880.974536
EM: Round [230] log likelihood: -1781880.974360
EM: Round [231] log likelihood: -1781880.974188
EM: Round [232] log likelihood: -1781880.974020
EM: Round [233] log likelihood: -1781880.973856
EM: Round [234] log likelihood: -1781880.973697
EM: Round [235] log likelihood: -1781880.973541
EM: Round [236] log likelihood: -1781880.973389
EM: Round [237] log likelihood: -1781880.973241
EM: Round [238] log likelihood: -1781880.973096
EM: Round [239] log likelihood: -1781880.972955
EM: Round [240] log likelihood: -1781880.972817
EM: Round [241] log likelihood: -1781880.972682
EM: Round [242] log likelihood: -1781880.972551
EM: Round [243] log likelihood: -1781880.972423
EM: Round [244] log likelihood: -1781880.972297
EM: Round [245] log likelihood: -1781880.972175
EM: Round [246] log likelihood: -1781880.972056
EM: Round [247] log likelihood: -1781880.971940
EM: Round [248] log likelihood: -1781880.971826
EM: Round [249] log likelihood: -1781880.971715
EM: Round [250] log likelihood: -1781880.971607
EM: Round [251] log likelihood: -1781880.971501
EM: Round [252] log likelihood: -1781880.971398
EM: Round [253] log likelihood: -1781880.971297
EM: Round [254] log likelihood: -1781880.971199
EM: Stopping iterations at round 254 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.G8zIe4acAB/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.G8zIe4acAB/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.G8zIe4acAB/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 286230301 > /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.G8zIe4acAB/ctat_genome_lib_build_dir > /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.G8zIe4acAB/ctat_genome_lib_build_dir --annotate /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.G8zIe4acAB/ctat_genome_lib_build_dir
-done, see /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.G8zIe4acAB/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1346, filtered: 8182)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.G8zIe4acAB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.G8zIe4acAB/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000203799.13]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000259098.1]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000213904.9]
WARNING, no entry stored in dbm for [ENSG00000281103.2]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000223586.6]
WARNING, no entry stored in dbm for [ENSG00000232894.1]
WARNING, no entry stored in dbm for [ENSG00000213904.9]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000285051.2]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000262801.6]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000213904.9]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000210082.2]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000250251.6]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000285051.2]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000263883.1]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000234948.2]
WARNING, no entry stored in dbm for [ENSG00000259755.1]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000260126.2]
WARNING, no entry stored in dbm for [ENSG00000254681.6]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000284999.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [ENSG00000234769.7]
WARNING, no entry stored in dbm for [ENSG00000185596.16]
WARNING, no entry stored in dbm for [ENSG00000233614.6]
WARNING, no entry stored in dbm for [ENSG00000278834.1]
WARNING, no entry stored in dbm for [ENSG00000234948.2]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000234948.2]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000286458.1]
WARNING, no entry stored in dbm for [ENSG00000224251.6]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000227906.8]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000267196.1]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000213963.6]
WARNING, no entry stored in dbm for [ENSG00000268163.1]
WARNING, no entry stored in dbm for [ENSG00000285961.1]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000287920.1]
WARNING, no entry stored in dbm for [ENSG00000253541.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000213295.3]
WARNING, no entry stored in dbm for [ENSG00000234559.1]
WARNING, no entry stored in dbm for [ENSG00000231259.5]
WARNING, no entry stored in dbm for [ENSG00000278147.1]
WARNING, no entry stored in dbm for [ENSG00000257894.2]
WARNING, no entry stored in dbm for [ENSG00000211459.2]
WARNING, no entry stored in dbm for [ENSG00000251129.2]
WARNING, no entry stored in dbm for [ENSG00000229608.1]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000286912.1]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000259768.6]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000287763.1]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000248738.6]
WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000286797.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000235583.2]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000226040.3]
WARNING, no entry stored in dbm for [ENSG00000272589.1]
WARNING, no entry stored in dbm for [ENSG00000261628.1]
WARNING, no entry stored in dbm for [ENSG00000237004.4]
WARNING, no entry stored in dbm for [ENSG00000283132.1]
WARNING, no entry stored in dbm for [ENSG00000287232.1]
WARNING, no entry stored in dbm for [ENSG00000267767.3]
WARNING, no entry stored in dbm for [ENSG00000225891.2]
WARNING, no entry stored in dbm for [ENSG00000277977.1]
WARNING, no entry stored in dbm for [ENSG00000230565.1]
WARNING, no entry stored in dbm for [ENSG00000240498.9]
WARNING, no entry stored in dbm for [ENSG00000277448.1]
WARNING, no entry stored in dbm for [ENSG00000196922.10]
WARNING, no entry stored in dbm for [ENSG00000238223.1]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000125804.14]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000270799.1]
WARNING, no entry stored in dbm for [ENSG00000270792.6]
WARNING, no entry stored in dbm for [ENSG00000258656.1]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000236229.1]
WARNING, no entry stored in dbm for [ENSG00000236229.1]
WARNING, no entry stored in dbm for [ENSG00000236229.1]
WARNING, no entry stored in dbm for [ENSG00000228876.4]
WARNING, no entry stored in dbm for [ENSG00000229419.1]
WARNING, no entry stored in dbm for [ENSG00000203307.2]
WARNING, no entry stored in dbm for [ENSG00000203987.3]
WARNING, no entry stored in dbm for [ENSG00000225022.1]
WARNING, no entry stored in dbm for [ENSG00000224188.1]
WARNING, no entry stored in dbm for [ENSG00000248049.7]
WARNING, no entry stored in dbm for [ENSG00000226648.2]
WARNING, no entry stored in dbm for [ENSG00000232823.2]
WARNING, no entry stored in dbm for [ENSG00000228236.2]
WARNING, no entry stored in dbm for [ENSG00000225963.8]
WARNING, no entry stored in dbm for [ENSG00000226629.1]
WARNING, no entry stored in dbm for [ENSG00000254641.1]
WARNING, no entry stored in dbm for [ENSG00000244097.1]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000241684.6]
WARNING, no entry stored in dbm for [ENSG00000099251.14]
WARNING, no entry stored in dbm for [ENSG00000249684.6]
WARNING, no entry stored in dbm for [ENSG00000256745.1]
WARNING, no entry stored in dbm for [ENSG00000243319.7]
WARNING, no entry stored in dbm for [ENSG00000260922.2]
WARNING, no entry stored in dbm for [ENSG00000264538.6]
WARNING, no entry stored in dbm for [ENSG00000277741.4]
WARNING, no entry stored in dbm for [ENSG00000277741.4]
WARNING, no entry stored in dbm for [ENSG00000253706.5]
WARNING, no entry stored in dbm for [ENSG00000230257.5]
WARNING, no entry stored in dbm for [ENSG00000259488.2]
WARNING, no entry stored in dbm for [ENSG00000234106.3]
WARNING, no entry stored in dbm for [ENSG00000254418.1]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000276721.1]
WARNING, no entry stored in dbm for [ENSG00000262500.1]
WARNING, no entry stored in dbm for [ENSG00000209482.1]
WARNING, no entry stored in dbm for [ENSG00000201302.1]
WARNING, no entry stored in dbm for [ENSG00000233016.7]
WARNING, no entry stored in dbm for [ENSG00000175061.18]
WARNING, no entry stored in dbm for [ENSG00000163597.15]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000269834.6]
WARNING, no entry stored in dbm for [ENSG00000258232.2]
WARNING, no entry stored in dbm for [ENSG00000277072.5]
WARNING, no entry stored in dbm for [ENSG00000267383.7]
WARNING, no entry stored in dbm for [ENSG00000240535.8]
WARNING, no entry stored in dbm for [ENSG00000258084.6]
WARNING, no entry stored in dbm for [ENSG00000286953.1]
WARNING, no entry stored in dbm for [ENSG00000197847.12]
WARNING, no entry stored in dbm for [ENSG00000267412.1]
WARNING, no entry stored in dbm for [ENSG00000260528.5]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000267470.6]
WARNING, no entry stored in dbm for [ENSG00000281131.1]
WARNING, no entry stored in dbm for [ENSG00000214900.11]
WARNING, no entry stored in dbm for [ENSG00000241671.1]
WARNING, no entry stored in dbm for [ENSG00000234619.1]
WARNING, no entry stored in dbm for [ENSG00000239199.1]
WARNING, no entry stored in dbm for [ENSG00000243181.2]
WARNING, no entry stored in dbm for [ENSG00000225661.7]
WARNING, no entry stored in dbm for [ENSG00000139239.7]
WARNING, no entry stored in dbm for [ENSG00000242941.1]
WARNING, no entry stored in dbm for [ENSG00000243007.1]
WARNING, no entry stored in dbm for [ENSG00000245534.7]
WARNING, no entry stored in dbm for [ENSG00000267669.1]
WARNING, no entry stored in dbm for [ENSG00000244056.3]
WARNING, no entry stored in dbm for [ENSG00000242430.3]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000241198.3]
WARNING, no entry stored in dbm for [ENSG00000249345.8]
WARNING, no entry stored in dbm for [ENSG00000189089.5]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000230556.1]
WARNING, no entry stored in dbm for [ENSG00000229419.1]
WARNING, no entry stored in dbm for [ENSG00000235777.1]
WARNING, no entry stored in dbm for [ENSG00000260930.2]
WARNING, no entry stored in dbm for [ENSG00000259905.7]
WARNING, no entry stored in dbm for [ENSG00000225475.1]
WARNING, no entry stored in dbm for [ENSG00000267698.1]
WARNING, no entry stored in dbm for [ENSG00000230487.8]
WARNING, no entry stored in dbm for [ENSG00000204261.9]
WARNING, no entry stored in dbm for [ENSG00000259948.2]
WARNING, no entry stored in dbm for [ENSG00000235431.2]
WARNING, no entry stored in dbm for [ENSG00000254851.1]
WARNING, no entry stored in dbm for [ENSG00000263317.1]
WARNING, no entry stored in dbm for [ENSG00000266561.2]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000236136.1]
WARNING, no entry stored in dbm for [ENSG00000254554.1]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000262096.2]
WARNING, no entry stored in dbm for [ENSG00000234287.1]
WARNING, no entry stored in dbm for [ENSG00000267107.8]
WARNING, no entry stored in dbm for [ENSG00000189223.15]
WARNING, no entry stored in dbm for [ENSG00000239883.8]
WARNING, no entry stored in dbm for [ENSG00000229539.1]
WARNING, no entry stored in dbm for [ENSG00000178458.5]
WARNING, no entry stored in dbm for [ENSG00000274403.1]
WARNING, no entry stored in dbm for [ENSG00000225159.1]
WARNING, no entry stored in dbm for [ENSG00000237445.2]
WARNING, no entry stored in dbm for [ENSG00000266916.7]
WARNING, no entry stored in dbm for [ENSG00000287156.1]
WARNING, no entry stored in dbm for [ENSG00000256193.6]
WARNING, no entry stored in dbm for [ENSG00000234996.4]
WARNING, no entry stored in dbm for [ENSG00000225774.2]
WARNING, no entry stored in dbm for [ENSG00000266179.2]
WARNING, no entry stored in dbm for [ENSG00000288560.1]
WARNING, no entry stored in dbm for [ENSG00000229163.2]
WARNING, no entry stored in dbm for [ENSG00000249917.3]
WARNING, no entry stored in dbm for [ENSG00000266865.6]
WARNING, no entry stored in dbm for [ENSG00000258661.1]
WARNING, no entry stored in dbm for [ENSG00000235251.2]
WARNING, no entry stored in dbm for [ENSG00000282924.1]
WARNING, no entry stored in dbm for [ENSG00000259240.1]
WARNING, no entry stored in dbm for [ENSG00000233006.8]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000230937.12]
WARNING, no entry stored in dbm for [ENSG00000228010.6]
WARNING, no entry stored in dbm for [ENSG00000181984.11]
WARNING, no entry stored in dbm for [ENSG00000286694.1]
WARNING, no entry stored in dbm for [ENSG00000288612.1]
WARNING, no entry stored in dbm for [ENSG00000226548.1]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000231999.7]
WARNING, no entry stored in dbm for [ENSG00000201010.1]
WARNING, no entry stored in dbm for [ENSG00000236740.6]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000234222.6]
WARNING, no entry stored in dbm for [ENSG00000255433.5]
WARNING, no entry stored in dbm for [ENSG00000258038.6]
WARNING, no entry stored in dbm for [ENSG00000248510.2]
WARNING, no entry stored in dbm for [ENSG00000281903.2]
WARNING, no entry stored in dbm for [ENSG00000250974.4]
WARNING, no entry stored in dbm for [ENSG00000248489.2]
WARNING, no entry stored in dbm for [ENSG00000262188.2]
WARNING, no entry stored in dbm for [ENSG00000251675.1]
WARNING, no entry stored in dbm for [ENSG00000220804.8]
WARNING, no entry stored in dbm for [ENSG00000234308.3]
WARNING, no entry stored in dbm for [ENSG00000250302.3]
WARNING, no entry stored in dbm for [ENSG00000236882.8]
WARNING, no entry stored in dbm for [ENSG00000234948.2]
WARNING, no entry stored in dbm for [ENSG00000228065.11]
WARNING, no entry stored in dbm for [ENSG00000237491.10]
WARNING, no entry stored in dbm for [ENSG00000251396.7]
WARNING, no entry stored in dbm for [ENSG00000258689.1]
WARNING, no entry stored in dbm for [ENSG00000236423.6]
WARNING, no entry stored in dbm for [ENSG00000204054.14]
WARNING, no entry stored in dbm for [ENSG00000245164.8]
WARNING, no entry stored in dbm for [ENSG00000233117.4]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000232677.9]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000258279.4]
WARNING, no entry stored in dbm for [ENSG00000229694.7]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000258535.1]
WARNING, no entry stored in dbm for [ENSG00000189223.15]
WARNING, no entry stored in dbm for [ENSG00000286483.1]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000229222.1]
WARNING, no entry stored in dbm for [ENSG00000253868.4]
WARNING, no entry stored in dbm for [ENSG00000257671.1]
WARNING, no entry stored in dbm for [ENSG00000284525.1]
WARNING, no entry stored in dbm for [ENSG00000232712.6]
WARNING, no entry stored in dbm for [ENSG00000278408.1]
WARNING, no entry stored in dbm for [ENSG00000268516.2]
WARNING, no entry stored in dbm for [ENSG00000188599.17]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000279692.1]
WARNING, no entry stored in dbm for [ENSG00000228408.6]
WARNING, no entry stored in dbm for [ENSG00000226946.1]
WARNING, no entry stored in dbm for [ENSG00000235092.6]
WARNING, no entry stored in dbm for [ENSG00000276975.3]
WARNING, no entry stored in dbm for [ENSG00000225217.1]
WARNING, no entry stored in dbm for [ENSG00000224329.2]
WARNING, no entry stored in dbm for [ENSG00000133519.12]
WARNING, no entry stored in dbm for [ENSG00000236539.3]
WARNING, no entry stored in dbm for [ENSG00000229237.2]
WARNING, no entry stored in dbm for [ENSG00000250787.1]
WARNING, no entry stored in dbm for [ENSG00000253774.1]
WARNING, no entry stored in dbm for [ENSG00000234239.1]
WARNING, no entry stored in dbm for [ENSG00000287222.1]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000182048.11]
WARNING, no entry stored in dbm for [ENSG00000254718.6]
WARNING, no entry stored in dbm for [ENSG00000233910.1]
WARNING, no entry stored in dbm for [ENSG00000230596.3]
WARNING, no entry stored in dbm for [ENSG00000251188.1]
WARNING, no entry stored in dbm for [ENSG00000257759.2]
WARNING, no entry stored in dbm for [ENSG00000267712.6]
WARNING, no entry stored in dbm for [ENSG00000182796.14]
WARNING, no entry stored in dbm for [ENSG00000234222.6]
WARNING, no entry stored in dbm for [ENSG00000258509.1]
WARNING, no entry stored in dbm for [ENSG00000279652.1]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000227081.5]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000267265.5]
WARNING, no entry stored in dbm for [ENSG00000254349.6]
WARNING, no entry stored in dbm for [ENSG00000223959.8]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000265008.1]
WARNING, no entry stored in dbm for [ENSG00000234975.6]
WARNING, no entry stored in dbm for [ENSG00000277437.1]
WARNING, no entry stored in dbm for [ENSG00000261513.1]
WARNING, no entry stored in dbm for [ENSG00000245937.8]
WARNING, no entry stored in dbm for [ENSG00000240801.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000255390.1]
WARNING, no entry stored in dbm for [ENSG00000255052.5]
WARNING, no entry stored in dbm for [ENSG00000254016.3]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000253894.2]
WARNING, no entry stored in dbm for [ENSG00000251538.7]
WARNING, no entry stored in dbm for [ENSG00000273018.7]
WARNING, no entry stored in dbm for [ENSG00000154874.15]
WARNING, no entry stored in dbm for [ENSG00000239719.1]
WARNING, no entry stored in dbm for [ENSG00000287998.1]
WARNING, no entry stored in dbm for [ENSG00000259032.2]
WARNING, no entry stored in dbm for [ENSG00000238230.2]
WARNING, no entry stored in dbm for [ENSG00000254293.1]
WARNING, no entry stored in dbm for [ENSG00000233483.3]
WARNING, no entry stored in dbm for [ENSG00000224220.1]
WARNING, no entry stored in dbm for [ENSG00000177369.9]
WARNING, no entry stored in dbm for [ENSG00000260782.1]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000203364.2]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000258583.7]
WARNING, no entry stored in dbm for [ENSG00000286458.1]
WARNING, no entry stored in dbm for [ENSG00000235700.1]
WARNING, no entry stored in dbm for [ENSG00000226752.9]
WARNING, no entry stored in dbm for [ENSG00000258592.1]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000233937.7]
WARNING, no entry stored in dbm for [ENSG00000232827.3]
WARNING, no entry stored in dbm for [ENSG00000233937.7]
WARNING, no entry stored in dbm for [ENSG00000248103.1]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000287449.1]
WARNING, no entry stored in dbm for [ENSG00000254477.2]
WARNING, no entry stored in dbm for [ENSG00000225470.8]
WARNING, no entry stored in dbm for [ENSG00000237773.7]
WARNING, no entry stored in dbm for [ENSG00000227896.2]
WARNING, no entry stored in dbm for [ENSG00000225259.4]
WARNING, no entry stored in dbm for [ENSG00000224216.1]
WARNING, no entry stored in dbm for [ENSG00000249148.2]
WARNING, no entry stored in dbm for [ENSG00000250332.1]
WARNING, no entry stored in dbm for [ENSG00000245958.6]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000285632.1]
WARNING, no entry stored in dbm for [ENSG00000154608.14]
WARNING, no entry stored in dbm for [ENSG00000226937.9]
WARNING, no entry stored in dbm for [ENSG00000249379.2]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000251421.2]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000260066.1]
WARNING, no entry stored in dbm for [ENSG00000188825.14]
WARNING, no entry stored in dbm for [ENSG00000238207.2]
WARNING, no entry stored in dbm for [ENSG00000280171.1]
WARNING, no entry stored in dbm for [ENSG00000270453.1]
WARNING, no entry stored in dbm for [ENSG00000218418.2]
WARNING, no entry stored in dbm for [ENSG00000188511.12]
WARNING, no entry stored in dbm for [ENSG00000198555.7]
WARNING, no entry stored in dbm for [ENSG00000251629.7]
WARNING, no entry stored in dbm for [ENSG00000260134.1]
WARNING, no entry stored in dbm for [ENSG00000260134.1]
WARNING, no entry stored in dbm for [ENSG00000285417.1]
WARNING, no entry stored in dbm for [ENSG00000238279.1]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000239300.6]
WARNING, no entry stored in dbm for [ENSG00000093100.13]
WARNING, no entry stored in dbm for [ENSG00000246223.9]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000254560.6]
WARNING, no entry stored in dbm for [ENSG00000231365.6]
WARNING, no entry stored in dbm for [ENSG00000226864.2]
WARNING, no entry stored in dbm for [ENSG00000248498.4]
WARNING, no entry stored in dbm for [ENSG00000226699.1]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000248528.1]
WARNING, no entry stored in dbm for [ENSG00000226835.3]
WARNING, no entry stored in dbm for [ENSG00000280302.1]
WARNING, no entry stored in dbm for [ENSG00000256443.1]
WARNING, no entry stored in dbm for [ENSG00000255216.2]
WARNING, no entry stored in dbm for [ENSG00000246889.2]
WARNING, no entry stored in dbm for [ENSG00000231355.1]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000254016.3]
WARNING, no entry stored in dbm for [ENSG00000234712.1]
WARNING, no entry stored in dbm for [ENSG00000286989.1]
WARNING, no entry stored in dbm for [ENSG00000270094.1]
WARNING, no entry stored in dbm for [ENSG00000284640.1]
WARNING, no entry stored in dbm for [ENSG00000224848.2]
WARNING, no entry stored in dbm for [ENSG00000170161.7]
WARNING, no entry stored in dbm for [ENSG00000170161.7]
WARNING, no entry stored in dbm for [ENSG00000279321.1]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000224251.6]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000258842.1]
WARNING, no entry stored in dbm for [ENSG00000232347.1]
WARNING, no entry stored in dbm for [ENSG00000226609.2]
WARNING, no entry stored in dbm for [ENSG00000235582.2]
WARNING, no entry stored in dbm for [ENSG00000215016.2]
WARNING, no entry stored in dbm for [ENSG00000237461.2]
WARNING, no entry stored in dbm for [ENSG00000204790.9]
WARNING, no entry stored in dbm for [ENSG00000287480.1]
WARNING, no entry stored in dbm for [ENSG00000288016.1]
WARNING, no entry stored in dbm for [ENSG00000233406.5]
WARNING, no entry stored in dbm for [ENSG00000258553.5]
WARNING, no entry stored in dbm for [ENSG00000197670.6]
WARNING, no entry stored in dbm for [ENSG00000259049.1]
WARNING, no entry stored in dbm for [ENSG00000233379.2]
WARNING, no entry stored in dbm for [ENSG00000261011.1]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000279286.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000261641.2]
WARNING, no entry stored in dbm for [ENSG00000223959.8]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000268758.7]
WARNING, no entry stored in dbm for [ENSG00000161912.18]
WARNING, no entry stored in dbm for [ENSG00000252481.1]
WARNING, no entry stored in dbm for [ENSG00000287750.1]
WARNING, no entry stored in dbm for [ENSG00000254860.6]
WARNING, no entry stored in dbm for [ENSG00000285062.1]
WARNING, no entry stored in dbm for [ENSG00000235181.1]
WARNING, no entry stored in dbm for [ENSG00000223804.5]
WARNING, no entry stored in dbm for [ENSG00000279047.4]
WARNING, no entry stored in dbm for [ENSG00000225370.1]
WARNING, no entry stored in dbm for [ENSG00000277089.4]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000249942.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000250767.1]
WARNING, no entry stored in dbm for [ENSG00000250909.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000224888.4]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000198555.7]
WARNING, no entry stored in dbm for [ENSG00000222397.1]
WARNING, no entry stored in dbm for [ENSG00000268278.1]
WARNING, no entry stored in dbm for [ENSG00000284675.1]
WARNING, no entry stored in dbm for [ENSG00000256663.1]
WARNING, no entry stored in dbm for [ENSG00000213539.4]
WARNING, no entry stored in dbm for [ENSG00000287030.1]
WARNING, no entry stored in dbm for [ENSG00000236439.4]
WARNING, no entry stored in dbm for [ENSG00000287392.1]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000261017.1]
WARNING, no entry stored in dbm for [ENSG00000236229.1]
WARNING, no entry stored in dbm for [ENSG00000228303.1]
WARNING, no entry stored in dbm for [ENSG00000259976.3]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000269001.2]
WARNING, no entry stored in dbm for [ENSG00000248126.1]
WARNING, no entry stored in dbm for [ENSG00000234686.1]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000131484.4]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000284783.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000266379.6]
WARNING, no entry stored in dbm for [ENSG00000267023.5]
WARNING, no entry stored in dbm for [ENSG00000283415.2]
WARNING, no entry stored in dbm for [ENSG00000284707.2]
WARNING, no entry stored in dbm for [ENSG00000284636.1]
WARNING, no entry stored in dbm for [ENSG00000273819.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000231359.3]
WARNING, no entry stored in dbm for [ENSG00000213942.3]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000248618.1]
WARNING, no entry stored in dbm for [ENSG00000279421.1]
WARNING, no entry stored in dbm for [ENSG00000279421.1]
WARNING, no entry stored in dbm for [ENSG00000197320.5]
WARNING, no entry stored in dbm for [ENSG00000250166.3]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000286934.1]
WARNING, no entry stored in dbm for [ENSG00000227543.5]
WARNING, no entry stored in dbm for [ENSG00000184188.6]
WARNING, no entry stored in dbm for [ENSG00000259354.5]
WARNING, no entry stored in dbm for [ENSG00000283544.1]
WARNING, no entry stored in dbm for [ENSG00000285329.1]
WARNING, no entry stored in dbm for [ENSG00000286909.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000213963.6]
WARNING, no entry stored in dbm for [ENSG00000286186.1]
WARNING, no entry stored in dbm for [ENSG00000257342.1]
WARNING, no entry stored in dbm for [ENSG00000218175.2]
WARNING, no entry stored in dbm for [ENSG00000286030.2]
WARNING, no entry stored in dbm for [ENSG00000186148.13]
WARNING, no entry stored in dbm for [ENSG00000268543.1]
WARNING, no entry stored in dbm for [ENSG00000228007.1]
WARNING, no entry stored in dbm for [ENSG00000244335.3]
WARNING, no entry stored in dbm for [ENSG00000197813.6]
WARNING, no entry stored in dbm for [ENSG00000247199.5]
WARNING, no entry stored in dbm for [ENSG00000227417.3]
WARNING, no entry stored in dbm for [ENSG00000275547.1]
WARNING, no entry stored in dbm for [ENSG00000260865.1]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000260905.1]
WARNING, no entry stored in dbm for [ENSG00000249042.6]
WARNING, no entry stored in dbm for [ENSG00000268112.1]
WARNING, no entry stored in dbm for [ENSG00000278979.1]
WARNING, no entry stored in dbm for [ENSG00000244055.2]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000269145.2]
WARNING, no entry stored in dbm for [ENSG00000263345.1]
WARNING, no entry stored in dbm for [ENSG00000266368.1]
WARNING, no entry stored in dbm for [ENSG00000267243.6]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000235581.1]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000279488.1]
WARNING, no entry stored in dbm for [ENSG00000276805.2]
WARNING, no entry stored in dbm for [ENSG00000260188.1]
WARNING, no entry stored in dbm for [ENSG00000285090.1]
WARNING, no entry stored in dbm for [ENSG00000283366.2]
WARNING, no entry stored in dbm for [ENSG00000229107.2]
WARNING, no entry stored in dbm for [ENSG00000223553.6]
WARNING, no entry stored in dbm for [ENSG00000272601.1]
WARNING, no entry stored in dbm for [ENSG00000241556.1]
WARNING, no entry stored in dbm for [ENSG00000268895.6]


	* STAR-Fusion complete.  See output: /tmp/nxf.G8zIe4acAB/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)