Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a2/523610711a51c038e7bd55e50acbf8/1173_RDM_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/01/8fde9c5ea8a15d0ba6e6479688df4f/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/f25c4e1105a30ff8f5176a1c8d929f/1173_RDM_T1_RNA_SLD_01_A23T55JLT4_2_1.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/f25c4e1105a30ff8f5176a1c8d929f/1173_RDM_T1_RNA_SLD_01_A23T55JLT4_2_2.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/01/8fde9c5ea8a15d0ba6e6479688df4f/.command.run
==> STAGING COMPLETE (6 inputs)
-ctat genome lib [/tmp/nxf.axwtW9TiV8/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.axwtW9TiV8/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary
-sample contains 137399873 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.axwtW9TiV8/ctat_genome_lib_build_dir -J /tmp/nxf.axwtW9TiV8/1173_RDM_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction -O /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.axwtW9TiV8/1173_RDM_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.axwtW9TiV8/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
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[2060000], rate=69243.70/min -building interval tree based on /tmp/nxf.axwtW9TiV8/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[2070000], rate=66846.07/min -building interval tree based on /tmp/nxf.axwtW9TiV8/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
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[2050000], rate=56525.74/min -building interval tree based on /tmp/nxf.axwtW9TiV8/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
[10000], rate=66666.67/min
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[1910000], rate=55202.31/min
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[2000000], rate=52840.16/min
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[2040000], rate=50746.27/min
[2050000], rate=50638.12/min
[2060000], rate=50366.75/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.axwtW9TiV8/ctat_genome_lib_build_dir --filt_file /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
12000000.00 reads per min processed...
9000000.00 reads per min processed...
12000000.00 reads per min processed...
10000000.00 reads per min processed...
12000000.00 reads per min processed...
10500000.00 reads per min processed...
9600000.00 reads per min processed...
7714285.71 reads per min processed...
6666666.67 reads per min processed...
6600000.00 reads per min processed...
6000000.00 reads per min processed...
5571428.57 reads per min processed...
5250000.00 reads per min processed...
5294117.65 reads per min processed...
5333333.33 reads per min processed...
5100000.00 reads per min processed...
4909090.91 reads per min processed...
4956521.74 reads per min processed...
4800000.00 reads per min processed...
4666666.67 reads per min processed...
4714285.71 reads per min processed...
4600000.00 reads per min processed...
4500000.00 reads per min processed...
4411764.71 reads per min processed...
4457142.86 reads per min processed...
4378378.38 reads per min processed...
4307692.31 reads per min processed...
4243902.44 reads per min processed...
4186046.51 reads per min processed...
4133333.33 reads per min processed...
4173913.04 reads per min processed...
4125000.00 reads per min processed...
4163265.31 reads per min processed...
4200000.00 reads per min processed...
4153846.15 reads per min processed...
4188679.25 reads per min processed...
4145454.55 reads per min processed...
4178571.43 reads per min processed...
4210526.32 reads per min processed...
4241379.31 reads per min processed...
4271186.44 reads per min processed...
4300000.00 reads per min processed...
4327868.85 reads per min processed...
4426229.51 reads per min processed...
4451612.90 reads per min processed...
4548387.10 reads per min processed...
4571428.57 reads per min processed...
4523076.92 reads per min processed...
4545454.55 reads per min processed...
4567164.18 reads per min processed...
4521739.13 reads per min processed...
4542857.14 reads per min processed...
4500000.00 reads per min processed...
4459459.46 reads per min processed...
4480000.00 reads per min processed...
4441558.44 reads per min processed...
4461538.46 reads per min processed...
4425000.00 reads per min processed...
4444444.44 reads per min processed...
4409638.55 reads per min processed...
4428571.43 reads per min processed...
4395348.84 reads per min processed...
4413793.10 reads per min processed...
4382022.47 reads per min processed...
4400000.00 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.axwtW9TiV8/1173_RDM_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.axwtW9TiV8/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -293453.972246
EM: Round [1] log likelihood: -293040.261155
EM: Round [2] log likelihood: -292892.516396
EM: Round [3] log likelihood: -292824.327692
EM: Round [4] log likelihood: -292788.551430
EM: Round [5] log likelihood: -292768.327010
EM: Round [6] log likelihood: -292756.224157
EM: Round [7] log likelihood: -292748.598876
EM: Round [8] log likelihood: -292743.558732
EM: Round [9] log likelihood: -292740.079062
EM: Round [10] log likelihood: -292737.582980
EM: Round [11] log likelihood: -292735.732694
EM: Round [12] log likelihood: -292734.322524
EM: Round [13] log likelihood: -292733.222394
EM: Round [14] log likelihood: -292732.347065
EM: Round [15] log likelihood: -292731.638837
EM: Round [16] log likelihood: -292731.057507
EM: Round [17] log likelihood: -292730.574337
EM: Round [18] log likelihood: -292730.168328
EM: Round [19] log likelihood: -292729.823836
EM: Round [20] log likelihood: -292729.529009
EM: Round [21] log likelihood: -292729.274736
EM: Round [22] log likelihood: -292729.053918
EM: Round [23] log likelihood: -292728.860957
EM: Round [24] log likelihood: -292728.691391
EM: Round [25] log likelihood: -292728.541628
EM: Round [26] log likelihood: -292728.408749
EM: Round [27] log likelihood: -292728.290360
EM: Round [28] log likelihood: -292728.184484
EM: Round [29] log likelihood: -292728.089472
EM: Round [30] log likelihood: -292728.003943
EM: Round [31] log likelihood: -292727.926729
EM: Round [32] log likelihood: -292727.856840
EM: Round [33] log likelihood: -292727.793427
EM: Round [34] log likelihood: -292727.735763
EM: Round [35] log likelihood: -292727.683216
EM: Round [36] log likelihood: -292727.635241
EM: Round [37] log likelihood: -292727.591362
EM: Round [38] log likelihood: -292727.551161
EM: Round [39] log likelihood: -292727.514273
EM: Round [40] log likelihood: -292727.480372
EM: Round [41] log likelihood: -292727.449174
EM: Round [42] log likelihood: -292727.420425
EM: Round [43] log likelihood: -292727.393898
EM: Round [44] log likelihood: -292727.369391
EM: Round [45] log likelihood: -292727.346725
EM: Round [46] log likelihood: -292727.325737
EM: Round [47] log likelihood: -292727.306281
EM: Round [48] log likelihood: -292727.288228
EM: Round [49] log likelihood: -292727.271458
EM: Round [50] log likelihood: -292727.255866
EM: Round [51] log likelihood: -292727.241353
EM: Round [52] log likelihood: -292727.227833
EM: Round [53] log likelihood: -292727.215227
EM: Round [54] log likelihood: -292727.203461
EM: Round [55] log likelihood: -292727.192471
EM: Round [56] log likelihood: -292727.182195
EM: Round [57] log likelihood: -292727.172580
EM: Round [58] log likelihood: -292727.163576
EM: Round [59] log likelihood: -292727.155136
EM: Round [60] log likelihood: -292727.147220
EM: Round [61] log likelihood: -292727.139788
EM: Round [62] log likelihood: -292727.132806
EM: Round [63] log likelihood: -292727.126241
EM: Round [64] log likelihood: -292727.120063
EM: Round [65] log likelihood: -292727.114247
EM: Round [66] log likelihood: -292727.108765
EM: Round [67] log likelihood: -292727.103596
EM: Round [68] log likelihood: -292727.098718
EM: Round [69] log likelihood: -292727.094112
EM: Round [70] log likelihood: -292727.089759
EM: Round [71] log likelihood: -292727.085643
EM: Round [72] log likelihood: -292727.081748
EM: Round [73] log likelihood: -292727.078060
EM: Round [74] log likelihood: -292727.074565
EM: Round [75] log likelihood: -292727.071252
EM: Round [76] log likelihood: -292727.068109
EM: Round [77] log likelihood: -292727.065126
EM: Round [78] log likelihood: -292727.062292
EM: Round [79] log likelihood: -292727.059599
EM: Round [80] log likelihood: -292727.057038
EM: Round [81] log likelihood: -292727.054602
EM: Round [82] log likelihood: -292727.052282
EM: Round [83] log likelihood: -292727.050073
EM: Round [84] log likelihood: -292727.047968
EM: Round [85] log likelihood: -292727.045960
EM: Round [86] log likelihood: -292727.044046
EM: Round [87] log likelihood: -292727.042218
EM: Round [88] log likelihood: -292727.040473
EM: Round [89] log likelihood: -292727.038806
EM: Round [90] log likelihood: -292727.037212
EM: Round [91] log likelihood: -292727.035689
EM: Round [92] log likelihood: -292727.034231
EM: Round [93] log likelihood: -292727.032837
EM: Round [94] log likelihood: -292727.031501
EM: Round [95] log likelihood: -292727.030222
EM: Round [96] log likelihood: -292727.028997
EM: Round [97] log likelihood: -292727.027822
EM: Round [98] log likelihood: -292727.026696
EM: Round [99] log likelihood: -292727.025615
EM: Round [100] log likelihood: -292727.024578
EM: Round [101] log likelihood: -292727.023583
EM: Round [102] log likelihood: -292727.022627
EM: Round [103] log likelihood: -292727.021709
EM: Round [104] log likelihood: -292727.020827
EM: Round [105] log likelihood: -292727.019980
EM: Round [106] log likelihood: -292727.019164
EM: Round [107] log likelihood: -292727.018380
EM: Round [108] log likelihood: -292727.017626
EM: Round [109] log likelihood: -292727.016901
EM: Round [110] log likelihood: -292727.016202
EM: Round [111] log likelihood: -292727.015529
EM: Round [112] log likelihood: -292727.014882
EM: Round [113] log likelihood: -292727.014258
EM: Round [114] log likelihood: -292727.013657
EM: Round [115] log likelihood: -292727.013077
EM: Round [116] log likelihood: -292727.012519
EM: Round [117] log likelihood: -292727.011980
EM: Round [118] log likelihood: -292727.011461
EM: Round [119] log likelihood: -292727.010960
EM: Round [120] log likelihood: -292727.010477
EM: Round [121] log likelihood: -292727.010010
EM: Round [122] log likelihood: -292727.009560
EM: Round [123] log likelihood: -292727.009125
EM: Round [124] log likelihood: -292727.008706
EM: Round [125] log likelihood: -292727.008301
EM: Round [126] log likelihood: -292727.007909
EM: Round [127] log likelihood: -292727.007531
EM: Round [128] log likelihood: -292727.007165
EM: Round [129] log likelihood: -292727.006812
EM: Round [130] log likelihood: -292727.006471
EM: Round [131] log likelihood: -292727.006141
EM: Round [132] log likelihood: -292727.005821
EM: Round [133] log likelihood: -292727.005513
EM: Round [134] log likelihood: -292727.005214
EM: Round [135] log likelihood: -292727.004925
EM: Round [136] log likelihood: -292727.004646
EM: Round [137] log likelihood: -292727.004376
EM: Round [138] log likelihood: -292727.004114
EM: Round [139] log likelihood: -292727.003861
EM: Round [140] log likelihood: -292727.003615
EM: Round [141] log likelihood: -292727.003378
EM: Round [142] log likelihood: -292727.003148
EM: Round [143] log likelihood: -292727.002926
EM: Round [144] log likelihood: -292727.002710
EM: Round [145] log likelihood: -292727.002501
EM: Round [146] log likelihood: -292727.002299
EM: Round [147] log likelihood: -292727.002103
EM: Round [148] log likelihood: -292727.001913
EM: Round [149] log likelihood: -292727.001728
EM: Round [150] log likelihood: -292727.001550
EM: Round [151] log likelihood: -292727.001377
EM: Round [152] log likelihood: -292727.001209
EM: Round [153] log likelihood: -292727.001046
EM: Round [154] log likelihood: -292727.000888
EM: Round [155] log likelihood: -292727.000735
EM: Round [156] log likelihood: -292727.000587
EM: Round [157] log likelihood: -292727.000443
EM: Round [158] log likelihood: -292727.000303
EM: Round [159] log likelihood: -292727.000167
EM: Round [160] log likelihood: -292727.000036
EM: Round [161] log likelihood: -292726.999908
EM: Round [162] log likelihood: -292726.999784
EM: Round [163] log likelihood: -292726.999664
EM: Round [164] log likelihood: -292726.999547
EM: Round [165] log likelihood: -292726.999434
EM: Round [166] log likelihood: -292726.999323
EM: Round [167] log likelihood: -292726.999216
EM: Round [168] log likelihood: -292726.999113
EM: Round [169] log likelihood: -292726.999012
EM: Round [170] log likelihood: -292726.998913
EM: Stopping iterations at round 170 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -292964.105255
EM: Round [1] log likelihood: -292621.565314
EM: Round [2] log likelihood: -292503.642641
EM: Round [3] log likelihood: -292450.252505
EM: Round [4] log likelihood: -292422.581265
EM: Round [5] log likelihood: -292407.063865
EM: Round [6] log likelihood: -292397.824175
EM: Round [7] log likelihood: -292392.019711
EM: Round [8] log likelihood: -292388.189365
EM: Round [9] log likelihood: -292385.547467
EM: Round [10] log likelihood: -292383.653546
EM: Round [11] log likelihood: -292382.250284
EM: Round [12] log likelihood: -292381.181182
EM: Round [13] log likelihood: -292380.347323
EM: Round [14] log likelihood: -292379.683906
EM: Round [15] log likelihood: -292379.147082
EM: Round [16] log likelihood: -292378.706312
EM: Round [17] log likelihood: -292378.339784
EM: Round [18] log likelihood: -292378.031571
EM: Round [19] log likelihood: -292377.769820
EM: Round [20] log likelihood: -292377.545561
EM: Round [21] log likelihood: -292377.351904
EM: Round [22] log likelihood: -292377.183485
EM: Round [23] log likelihood: -292377.036082
EM: Round [24] log likelihood: -292376.906329
EM: Round [25] log likelihood: -292376.791520
EM: Round [26] log likelihood: -292376.689456
EM: Round [27] log likelihood: -292376.598336
EM: Round [28] log likelihood: -292376.516672
EM: Round [29] log likelihood: -292376.443225
EM: Round [30] log likelihood: -292376.376956
EM: Round [31] log likelihood: -292376.316987
EM: Round [32] log likelihood: -292376.262573
EM: Round [33] log likelihood: -292376.213077
EM: Round [34] log likelihood: -292376.167950
EM: Round [35] log likelihood: -292376.126720
EM: Round [36] log likelihood: -292376.088975
EM: Round [37] log likelihood: -292376.054357
EM: Round [38] log likelihood: -292376.022552
EM: Round [39] log likelihood: -292375.993284
EM: Round [40] log likelihood: -292375.966309
EM: Round [41] log likelihood: -292375.941412
EM: Round [42] log likelihood: -292375.918401
EM: Round [43] log likelihood: -292375.897106
EM: Round [44] log likelihood: -292375.877373
EM: Round [45] log likelihood: -292375.859067
EM: Round [46] log likelihood: -292375.842065
EM: Round [47] log likelihood: -292375.826257
EM: Round [48] log likelihood: -292375.811543
EM: Round [49] log likelihood: -292375.797834
EM: Round [50] log likelihood: -292375.785048
EM: Round [51] log likelihood: -292375.773111
EM: Round [52] log likelihood: -292375.761957
EM: Round [53] log likelihood: -292375.751526
EM: Round [54] log likelihood: -292375.741761
EM: Round [55] log likelihood: -292375.732612
EM: Round [56] log likelihood: -292375.724034
EM: Round [57] log likelihood: -292375.715984
EM: Round [58] log likelihood: -292375.708423
EM: Round [59] log likelihood: -292375.701316
EM: Round [60] log likelihood: -292375.694632
EM: Round [61] log likelihood: -292375.688339
EM: Round [62] log likelihood: -292375.682411
EM: Round [63] log likelihood: -292375.676823
EM: Round [64] log likelihood: -292375.671552
EM: Round [65] log likelihood: -292375.666575
EM: Round [66] log likelihood: -292375.661874
EM: Round [67] log likelihood: -292375.657431
EM: Round [68] log likelihood: -292375.653228
EM: Round [69] log likelihood: -292375.649250
EM: Round [70] log likelihood: -292375.645482
EM: Round [71] log likelihood: -292375.641912
EM: Round [72] log likelihood: -292375.638528
EM: Round [73] log likelihood: -292375.635316
EM: Round [74] log likelihood: -292375.632268
EM: Round [75] log likelihood: -292375.629373
EM: Round [76] log likelihood: -292375.626621
EM: Round [77] log likelihood: -292375.624005
EM: Round [78] log likelihood: -292375.621517
EM: Round [79] log likelihood: -292375.619149
EM: Round [80] log likelihood: -292375.616893
EM: Round [81] log likelihood: -292375.614745
EM: Round [82] log likelihood: -292375.612697
EM: Round [83] log likelihood: -292375.610744
EM: Round [84] log likelihood: -292375.608881
EM: Round [85] log likelihood: -292375.607104
EM: Round [86] log likelihood: -292375.605406
EM: Round [87] log likelihood: -292375.603785
EM: Round [88] log likelihood: -292375.602235
EM: Round [89] log likelihood: -292375.600754
EM: Round [90] log likelihood: -292375.599337
EM: Round [91] log likelihood: -292375.597982
EM: Round [92] log likelihood: -292375.596685
EM: Round [93] log likelihood: -292375.595444
EM: Round [94] log likelihood: -292375.594254
EM: Round [95] log likelihood: -292375.593115
EM: Round [96] log likelihood: -292375.592023
EM: Round [97] log likelihood: -292375.590977
EM: Round [98] log likelihood: -292375.589973
EM: Round [99] log likelihood: -292375.589011
EM: Round [100] log likelihood: -292375.588087
EM: Round [101] log likelihood: -292375.587200
EM: Round [102] log likelihood: -292375.586349
EM: Round [103] log likelihood: -292375.585532
EM: Round [104] log likelihood: -292375.584746
EM: Round [105] log likelihood: -292375.583992
EM: Round [106] log likelihood: -292375.583267
EM: Round [107] log likelihood: -292375.582570
EM: Round [108] log likelihood: -292375.581900
EM: Round [109] log likelihood: -292375.581255
EM: Round [110] log likelihood: -292375.580635
EM: Round [111] log likelihood: -292375.580039
EM: Round [112] log likelihood: -292375.579465
EM: Round [113] log likelihood: -292375.578912
EM: Round [114] log likelihood: -292375.578380
EM: Round [115] log likelihood: -292375.577868
EM: Round [116] log likelihood: -292375.577374
EM: Round [117] log likelihood: -292375.576899
EM: Round [118] log likelihood: -292375.576441
EM: Round [119] log likelihood: -292375.575999
EM: Round [120] log likelihood: -292375.575574
EM: Round [121] log likelihood: -292375.575163
EM: Round [122] log likelihood: -292375.574768
EM: Round [123] log likelihood: -292375.574386
EM: Round [124] log likelihood: -292375.574018
EM: Round [125] log likelihood: -292375.573663
EM: Round [126] log likelihood: -292375.573321
EM: Round [127] log likelihood: -292375.572991
EM: Round [128] log likelihood: -292375.572672
EM: Round [129] log likelihood: -292375.572364
EM: Round [130] log likelihood: -292375.572067
EM: Round [131] log likelihood: -292375.571780
EM: Round [132] log likelihood: -292375.571502
EM: Round [133] log likelihood: -292375.571235
EM: Round [134] log likelihood: -292375.570976
EM: Round [135] log likelihood: -292375.570726
EM: Round [136] log likelihood: -292375.570485
EM: Round [137] log likelihood: -292375.570252
EM: Round [138] log likelihood: -292375.570026
EM: Round [139] log likelihood: -292375.569809
EM: Round [140] log likelihood: -292375.569598
EM: Round [141] log likelihood: -292375.569394
EM: Round [142] log likelihood: -292375.569198
EM: Round [143] log likelihood: -292375.569007
EM: Round [144] log likelihood: -292375.568823
EM: Round [145] log likelihood: -292375.568645
EM: Round [146] log likelihood: -292375.568473
EM: Round [147] log likelihood: -292375.568306
EM: Round [148] log likelihood: -292375.568145
EM: Round [149] log likelihood: -292375.567989
EM: Round [150] log likelihood: -292375.567838
EM: Round [151] log likelihood: -292375.567691
EM: Round [152] log likelihood: -292375.567550
EM: Round [153] log likelihood: -292375.567413
EM: Round [154] log likelihood: -292375.567280
EM: Round [155] log likelihood: -292375.567152
EM: Round [156] log likelihood: -292375.567027
EM: Round [157] log likelihood: -292375.566907
EM: Round [158] log likelihood: -292375.566790
EM: Round [159] log likelihood: -292375.566677
EM: Round [160] log likelihood: -292375.566567
EM: Round [161] log likelihood: -292375.566461
EM: Round [162] log likelihood: -292375.566358
EM: Round [163] log likelihood: -292375.566259
EM: Stopping iterations at round 163 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.axwtW9TiV8/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.axwtW9TiV8/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.axwtW9TiV8/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 137399873 > /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.axwtW9TiV8/ctat_genome_lib_build_dir > /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.axwtW9TiV8/ctat_genome_lib_build_dir --annotate /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.axwtW9TiV8/ctat_genome_lib_build_dir
-done, see /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.axwtW9TiV8/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1273, filtered: 10287)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.axwtW9TiV8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.axwtW9TiV8/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000228252.9]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000281103.2]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000229807.12]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000243753.5]
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WARNING, no entry stored in dbm for [ENSG00000223544.1]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000143429.10]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000220685.3]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000213801.4]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000226143.1]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000180714.3]
WARNING, no entry stored in dbm for [ENSG00000184139.8]
WARNING, no entry stored in dbm for [ENSG00000215869.4]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000234397.3]
WARNING, no entry stored in dbm for [ENSG00000254463.1]
WARNING, no entry stored in dbm for [ENSG00000235902.1]
WARNING, no entry stored in dbm for [ENSG00000259905.7]
WARNING, no entry stored in dbm for [ENSG00000259905.7]
WARNING, no entry stored in dbm for [ENSG00000259673.6]
WARNING, no entry stored in dbm for [ENSG00000181126.13]
WARNING, no entry stored in dbm for [ENSG00000204622.11]
WARNING, no entry stored in dbm for [ENSG00000235290.1]
WARNING, no entry stored in dbm for [ENSG00000241735.2]
WARNING, no entry stored in dbm for [ENSG00000234152.1]
WARNING, no entry stored in dbm for [ENSG00000229124.7]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000277511.1]
WARNING, no entry stored in dbm for [ENSG00000255621.1]
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WARNING, no entry stored in dbm for [ENSG00000277283.1]
WARNING, no entry stored in dbm for [ENSG00000237004.4]
WARNING, no entry stored in dbm for [ENSG00000248539.1]
WARNING, no entry stored in dbm for [ENSG00000241014.2]
WARNING, no entry stored in dbm for [ENSG00000233178.7]
WARNING, no entry stored in dbm for [ENSG00000223702.1]
WARNING, no entry stored in dbm for [ENSG00000277954.1]
WARNING, no entry stored in dbm for [ENSG00000279286.2]
WARNING, no entry stored in dbm for [ENSG00000255282.6]
WARNING, no entry stored in dbm for [ENSG00000272848.2]
WARNING, no entry stored in dbm for [ENSG00000228205.1]
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WARNING, no entry stored in dbm for [ENSG00000286572.1]
WARNING, no entry stored in dbm for [ENSG00000205930.10]
WARNING, no entry stored in dbm for [ENSG00000264519.2]
WARNING, no entry stored in dbm for [ENSG00000279910.1]
WARNING, no entry stored in dbm for [ENSG00000257599.3]
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WARNING, no entry stored in dbm for [ENSG00000267506.5]
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WARNING, no entry stored in dbm for [ENSG00000259545.2]
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WARNING, no entry stored in dbm for [ENSG00000223704.2]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000234617.2]
WARNING, no entry stored in dbm for [ENSG00000207475.1]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000286176.2]
WARNING, no entry stored in dbm for [ENSG00000233642.1]
WARNING, no entry stored in dbm for [ENSG00000227028.6]
WARNING, no entry stored in dbm for [ENSG00000178722.13]
WARNING, no entry stored in dbm for [ENSG00000286953.1]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000181984.11]
WARNING, no entry stored in dbm for [ENSG00000286694.1]
WARNING, no entry stored in dbm for [ENSG00000259354.5]
WARNING, no entry stored in dbm for [ENSG00000270330.1]
WARNING, no entry stored in dbm for [ENSG00000214189.9]
WARNING, no entry stored in dbm for [ENSG00000280351.2]
WARNING, no entry stored in dbm for [ENSG00000278983.1]
WARNING, no entry stored in dbm for [ENSG00000232995.7]
WARNING, no entry stored in dbm for [ENSG00000235903.9]
WARNING, no entry stored in dbm for [ENSG00000235926.1]
WARNING, no entry stored in dbm for [ENSG00000213238.6]
WARNING, no entry stored in dbm for [ENSG00000240494.2]
WARNING, no entry stored in dbm for [ENSG00000241462.1]
WARNING, no entry stored in dbm for [ENSG00000235544.1]
WARNING, no entry stored in dbm for [ENSG00000231427.6]
WARNING, no entry stored in dbm for [ENSG00000254519.5]
WARNING, no entry stored in dbm for [ENSG00000242248.2]
WARNING, no entry stored in dbm for [ENSG00000242071.3]
WARNING, no entry stored in dbm for [ENSG00000226448.1]
WARNING, no entry stored in dbm for [ENSG00000244540.2]
WARNING, no entry stored in dbm for [ENSG00000243141.2]
WARNING, no entry stored in dbm for [ENSG00000213753.11]
WARNING, no entry stored in dbm for [ENSG00000248439.2]
WARNING, no entry stored in dbm for [ENSG00000231322.5]
WARNING, no entry stored in dbm for [ENSG00000249373.2]
WARNING, no entry stored in dbm for [ENSG00000201510.1]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000273142.1]
WARNING, no entry stored in dbm for [ENSG00000236948.2]
WARNING, no entry stored in dbm for [ENSG00000259905.7]
WARNING, no entry stored in dbm for [ENSG00000214146.3]
WARNING, no entry stored in dbm for [ENSG00000278147.1]
WARNING, no entry stored in dbm for [ENSG00000279035.1]
WARNING, no entry stored in dbm for [ENSG00000226087.2]
WARNING, no entry stored in dbm for [ENSG00000248885.1]
WARNING, no entry stored in dbm for [ENSG00000248781.1]
WARNING, no entry stored in dbm for [ENSG00000197744.5]
WARNING, no entry stored in dbm for [ENSG00000229992.1]
WARNING, no entry stored in dbm for [ENSG00000269907.1]
WARNING, no entry stored in dbm for [ENSG00000269907.1]
WARNING, no entry stored in dbm for [ENSG00000266179.2]
WARNING, no entry stored in dbm for [ENSG00000285492.1]
WARNING, no entry stored in dbm for [ENSG00000281128.2]
WARNING, no entry stored in dbm for [ENSG00000235888.3]
WARNING, no entry stored in dbm for [ENSG00000257621.8]
WARNING, no entry stored in dbm for [ENSG00000248927.1]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000275880.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000200156.1]
WARNING, no entry stored in dbm for [ENSG00000199568.1]
WARNING, no entry stored in dbm for [ENSG00000227851.1]
WARNING, no entry stored in dbm for [ENSG00000205771.6]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000241350.1]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000250251.6]
WARNING, no entry stored in dbm for [ENSG00000229359.2]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000251055.2]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000204277.1]
WARNING, no entry stored in dbm for [ENSG00000260277.2]
WARNING, no entry stored in dbm for [ENSG00000267107.8]
WARNING, no entry stored in dbm for [ENSG00000257894.2]
WARNING, no entry stored in dbm for [ENSG00000266373.1]
WARNING, no entry stored in dbm for [ENSG00000257167.2]
WARNING, no entry stored in dbm for [ENSG00000228060.3]
WARNING, no entry stored in dbm for [ENSG00000183506.17]
WARNING, no entry stored in dbm for [ENSG00000186508.4]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000286546.1]
WARNING, no entry stored in dbm for [ENSG00000250564.2]
WARNING, no entry stored in dbm for [ENSG00000214807.2]
WARNING, no entry stored in dbm for [ENSG00000226703.1]
WARNING, no entry stored in dbm for [ENSG00000223864.1]
WARNING, no entry stored in dbm for [ENSG00000259161.2]
WARNING, no entry stored in dbm for [ENSG00000146677.7]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [ENSG00000224713.4]
WARNING, no entry stored in dbm for [ENSG00000232729.8]
WARNING, no entry stored in dbm for [ENSG00000237638.2]
WARNING, no entry stored in dbm for [ENSG00000255856.2]
WARNING, no entry stored in dbm for [ENSG00000135502.19]
WARNING, no entry stored in dbm for [ENSG00000237037.9]
WARNING, no entry stored in dbm for [ENSG00000203865.11]
WARNING, no entry stored in dbm for [ENSG00000242948.1]
WARNING, no entry stored in dbm for [ENSG00000268812.3]
WARNING, no entry stored in dbm for [ENSG00000288107.1]
WARNING, no entry stored in dbm for [ENSG00000186704.9]
WARNING, no entry stored in dbm for [ENSG00000267405.1]
WARNING, no entry stored in dbm for [ENSG00000234474.3]
WARNING, no entry stored in dbm for [ENSG00000221792.1]
WARNING, no entry stored in dbm for [ENSG00000243302.3]
WARNING, no entry stored in dbm for [ENSG00000285115.1]
WARNING, no entry stored in dbm for [ENSG00000273314.1]
WARNING, no entry stored in dbm for [ENSG00000230569.1]
WARNING, no entry stored in dbm for [ENSG00000279770.1]
WARNING, no entry stored in dbm for [ENSG00000253642.6]
WARNING, no entry stored in dbm for [ENSG00000254934.5]
WARNING, no entry stored in dbm for [ENSG00000231185.7]
WARNING, no entry stored in dbm for [ENSG00000278743.1]
WARNING, no entry stored in dbm for [ENSG00000248640.1]
WARNING, no entry stored in dbm for [ENSG00000280228.1]
WARNING, no entry stored in dbm for [ENSG00000258018.2]
WARNING, no entry stored in dbm for [ENSG00000215241.4]
WARNING, no entry stored in dbm for [ENSG00000254016.3]
WARNING, no entry stored in dbm for [ENSG00000254101.7]
WARNING, no entry stored in dbm for [ENSG00000230102.8]
WARNING, no entry stored in dbm for [ENSG00000237940.3]
WARNING, no entry stored in dbm for [ENSG00000284543.1]
WARNING, no entry stored in dbm for [ENSG00000269416.6]
WARNING, no entry stored in dbm for [ENSG00000189238.6]
WARNING, no entry stored in dbm for [ENSG00000246898.1]
WARNING, no entry stored in dbm for [ENSG00000187653.11]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000237460.3]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000248568.1]
WARNING, no entry stored in dbm for [ENSG00000135477.11]
WARNING, no entry stored in dbm for [ENSG00000260232.3]
WARNING, no entry stored in dbm for [ENSG00000273512.1]
WARNING, no entry stored in dbm for [ENSG00000257556.2]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000236778.8]
WARNING, no entry stored in dbm for [ENSG00000223959.8]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000270864.1]
WARNING, no entry stored in dbm for [ENSG00000261834.2]
WARNING, no entry stored in dbm for [ENSG00000234996.4]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000286314.1]
WARNING, no entry stored in dbm for [ENSG00000204682.8]
WARNING, no entry stored in dbm for [ENSG00000229046.1]
WARNING, no entry stored in dbm for [ENSG00000256557.1]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000259439.2]
WARNING, no entry stored in dbm for [ENSG00000237125.11]
WARNING, no entry stored in dbm for [ENSG00000261716.2]
WARNING, no entry stored in dbm for [ENSG00000220323.4]
WARNING, no entry stored in dbm for [ENSG00000287219.1]
WARNING, no entry stored in dbm for [ENSG00000230583.7]
WARNING, no entry stored in dbm for [ENSG00000271434.3]
WARNING, no entry stored in dbm for [ENSG00000213538.5]
WARNING, no entry stored in dbm for [ENSG00000274471.2]
WARNING, no entry stored in dbm for [ENSG00000232490.6]
WARNING, no entry stored in dbm for [ENSG00000285666.1]
WARNING, no entry stored in dbm for [ENSG00000232732.11]
WARNING, no entry stored in dbm for [ENSG00000277561.5]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000245060.8]
WARNING, no entry stored in dbm for [ENSG00000230979.3]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000255471.1]
WARNING, no entry stored in dbm for [ENSG00000272711.1]
WARNING, no entry stored in dbm for [ENSG00000223361.5]
WARNING, no entry stored in dbm for [ENSG00000233237.8]
WARNING, no entry stored in dbm for [ENSG00000244161.1]
WARNING, no entry stored in dbm for [ENSG00000244097.1]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000235768.1]
WARNING, no entry stored in dbm for [ENSG00000248139.2]
WARNING, no entry stored in dbm for [ENSG00000287286.1]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000255441.1]
WARNING, no entry stored in dbm for [ENSG00000230239.1]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000267943.1]
WARNING, no entry stored in dbm for [ENSG00000281649.2]
WARNING, no entry stored in dbm for [ENSG00000231346.5]
WARNING, no entry stored in dbm for [ENSG00000225728.2]
WARNING, no entry stored in dbm for [ENSG00000256508.2]
WARNING, no entry stored in dbm for [ENSG00000229358.3]
WARNING, no entry stored in dbm for [ENSG00000205790.1]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000267714.2]
WARNING, no entry stored in dbm for [ENSG00000237206.1]
WARNING, no entry stored in dbm for [ENSG00000278903.3]
WARNING, no entry stored in dbm for [ENSG00000239390.3]
WARNING, no entry stored in dbm for [ENSG00000244230.3]
WARNING, no entry stored in dbm for [ENSG00000185168.5]
WARNING, no entry stored in dbm for [ENSG00000233025.1]
WARNING, no entry stored in dbm for [ENSG00000245694.10]
WARNING, no entry stored in dbm for [ENSG00000279539.1]
WARNING, no entry stored in dbm for [ENSG00000278969.1]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000224216.1]
WARNING, no entry stored in dbm for [ENSG00000214428.3]
WARNING, no entry stored in dbm for [ENSG00000272888.7]
WARNING, no entry stored in dbm for [ENSG00000213478.2]
WARNING, no entry stored in dbm for [ENSG00000258498.8]
WARNING, no entry stored in dbm for [ENSG00000215039.7]
WARNING, no entry stored in dbm for [ENSG00000230615.7]
WARNING, no entry stored in dbm for [ENSG00000281420.1]
WARNING, no entry stored in dbm for [ENSG00000272767.1]
WARNING, no entry stored in dbm for [ENSG00000262049.1]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000237949.2]
WARNING, no entry stored in dbm for [ENSG00000279021.1]
WARNING, no entry stored in dbm for [ENSG00000267287.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000223602.2]
WARNING, no entry stored in dbm for [ENSG00000247271.7]
WARNING, no entry stored in dbm for [ENSG00000255031.5]
WARNING, no entry stored in dbm for [ENSG00000244040.7]
WARNING, no entry stored in dbm for [ENSG00000251143.1]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000264964.2]
WARNING, no entry stored in dbm for [ENSG00000284625.1]
WARNING, no entry stored in dbm for [ENSG00000248618.1]
WARNING, no entry stored in dbm for [ENSG00000246889.2]
WARNING, no entry stored in dbm for [ENSG00000235550.1]
WARNING, no entry stored in dbm for [ENSG00000216516.1]
WARNING, no entry stored in dbm for [ENSG00000284999.1]
WARNING, no entry stored in dbm for [ENSG00000237174.7]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [ENSG00000257472.1]
WARNING, no entry stored in dbm for [ENSG00000224307.2]
WARNING, no entry stored in dbm for [ENSG00000227579.6]
WARNING, no entry stored in dbm for [ENSG00000213579.3]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000286861.1]
WARNING, no entry stored in dbm for [ENSG00000284708.1]
WARNING, no entry stored in dbm for [ENSG00000213972.3]
WARNING, no entry stored in dbm for [ENSG00000219102.3]
WARNING, no entry stored in dbm for [ENSG00000226286.1]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000260081.2]
WARNING, no entry stored in dbm for [ENSG00000235931.2]
WARNING, no entry stored in dbm for [ENSG00000203876.10]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000224481.3]
WARNING, no entry stored in dbm for [ENSG00000274642.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000279613.1]
WARNING, no entry stored in dbm for [ENSG00000273551.1]
WARNING, no entry stored in dbm for [ENSG00000254035.1]
WARNING, no entry stored in dbm for [ENSG00000286995.1]
WARNING, no entry stored in dbm for [ENSG00000253111.2]
WARNING, no entry stored in dbm for [ENSG00000259363.6]
WARNING, no entry stored in dbm for [ENSG00000283415.2]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000233673.7]
WARNING, no entry stored in dbm for [ENSG00000257376.1]
WARNING, no entry stored in dbm for [ENSG00000261501.1]
WARNING, no entry stored in dbm for [ENSG00000245482.2]
WARNING, no entry stored in dbm for [ENSG00000286090.1]
WARNING, no entry stored in dbm for [ENSG00000267787.7]
WARNING, no entry stored in dbm for [ENSG00000282961.1]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000285600.1]
WARNING, no entry stored in dbm for [ENSG00000223628.2]
WARNING, no entry stored in dbm for [ENSG00000231414.1]
WARNING, no entry stored in dbm for [ENSG00000258488.2]
WARNING, no entry stored in dbm for [ENSG00000244436.2]
WARNING, no entry stored in dbm for [ENSG00000242858.1]
WARNING, no entry stored in dbm for [ENSG00000261329.6]
WARNING, no entry stored in dbm for [ENSG00000268543.1]
WARNING, no entry stored in dbm for [ENSG00000222017.1]
WARNING, no entry stored in dbm for [ENSG00000269050.1]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000257176.3]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000280152.1]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000269043.2]
WARNING, no entry stored in dbm for [ENSG00000233565.1]
WARNING, no entry stored in dbm for [ENSG00000257074.3]
WARNING, no entry stored in dbm for [ENSG00000285877.1]
WARNING, no entry stored in dbm for [ENSG00000249565.2]
WARNING, no entry stored in dbm for [ENSG00000256988.2]
WARNING, no entry stored in dbm for [ENSG00000279726.2]
WARNING, no entry stored in dbm for [ENSG00000241185.2]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000243554.1]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000241278.1]
WARNING, no entry stored in dbm for [ENSG00000228204.2]
WARNING, no entry stored in dbm for [ENSG00000265206.5]
WARNING, no entry stored in dbm for [ENSG00000265206.5]
WARNING, no entry stored in dbm for [ENSG00000268163.1]
WARNING, no entry stored in dbm for [ENSG00000258479.6]
* STAR-Fusion complete. See output: /tmp/nxf.axwtW9TiV8/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)