AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 152
Pass (FILTER=PASS): 15 (9.9%)
Fail (FILTER=FAIL): 137 (90.1%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 31
confidence_below_min(low<high): 13
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
Breakdown by confidence:
high: 15 pass, 0 fail (total: 15)
low: 0 pass, 67 fail (total: 67)
medium: 0 pass, 70 fail (total: 70)
Arriba filter: 152 rows -> 15 PASS; wrote 1173_K7E_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filtered.tsv and 1173_K7E_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: 1173_K7E_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filter_summary.txt