Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/eaee9ed82627c4e2d675b03d02a14f/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/28/e52e8573c2248265a8f36e75acf850/1173_NFO_T1_RNA_SLD_01_A23T55JLT4_2.star_alignment.Aligned.sortedByCoord.out.cram Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/eaee9ed82627c4e2d675b03d02a14f/.command.run ==> STAGING COMPLETE (3 inputs) ls: *.bai: No such file or directory ls: *.csi: No such file or directory