File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2b/b57af7b48e3049b9bebe164f32dade/.command.log
Size
4.0 KB
Task
NFCORE_RNAFUSION:DEMUX_FROM_RUNDIR:DEMULTIPLEX:FLOWCELL_QC (20260408_LH00995_0025_A23T55JLT4)
Attempt

Content

View in new tab 
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/11/8257f42d4e31197f46b9b99aa4e141/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6c/40b83d8a2778fad1897dd67cea2fc8/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ba/0de0f5590e521230905b20dd3b0f8d/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-labdata-rnd-dev-s3/illumina/20260408_LH00995_0025_A23T55JLT4/InterOp/ExtendedTileMetricsOut.bin
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ba/0de0f5590e521230905b20dd3b0f8d/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f1/20f2d16255bf9a7d4a662037d942da/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-labdata-rnd-dev-s3/illumina/20260408_LH00995_0025_A23T55JLT4/InterOp/EmpiricalPhasingMetricsOut.bin
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2b/b57af7b48e3049b9bebe164f32dade/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/11/8257f42d4e31197f46b9b99aa4e141/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ba/0de0f5590e521230905b20dd3b0f8d/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ea/185d3cdcb1cc05323d61fbbdde9193/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/06/e06c7c25604ad8de81ddf7c9b8f3e7/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6c/40b83d8a2778fad1897dd67cea2fc8/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-labdata-rnd-dev-s3/illumina/20260408_LH00995_0025_A23T55JLT4/InterOp/TileMetricsOut.bin
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ea/185d3cdcb1cc05323d61fbbdde9193/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/aa4a7aceac8847d07594388b9d5a18/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/aa4a7aceac8847d07594388b9d5a18/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6c/40b83d8a2778fad1897dd67cea2fc8/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/aa4a7aceac8847d07594388b9d5a18/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f1/20f2d16255bf9a7d4a662037d942da/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/11/8257f42d4e31197f46b9b99aa4e141/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/4fe303118b81d7ac161f16dac392fc/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/4fe303118b81d7ac161f16dac392fc/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/06/e06c7c25604ad8de81ddf7c9b8f3e7/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/06/e06c7c25604ad8de81ddf7c9b8f3e7/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ea/185d3cdcb1cc05323d61fbbdde9193/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/4fe303118b81d7ac161f16dac392fc/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2b/b57af7b48e3049b9bebe164f32dade/.command.run
  Downloading: s3://natera-labdata-rnd-dev-s3/illumina/20260408_LH00995_0025_A23T55JLT4/RunInfo.xml
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f1/20f2d16255bf9a7d4a662037d942da/output/Reports/Index_Hopping_Counts.csv
==> STAGING COMPLETE (30 inputs)

Wrote flowcell_qc.csv with 13/13 metrics populated