-ctat genome lib [/tmp/nxf.47U0qZQTvp/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.47U0qZQTvp/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary
-sample contains 190596515 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.47U0qZQTvp/ctat_genome_lib_build_dir -J /tmp/nxf.47U0qZQTvp/1173_RQT_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction -O /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.47U0qZQTvp/1173_RQT_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.47U0qZQTvp/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=54545.45/min
[20000], rate=63157.89/min
[30000], rate=62068.97/min
[40000], rate=64864.86/min
[50000], rate=66666.67/min
[60000], rate=67924.53/min
[70000], rate=67741.94/min
[80000], rate=66666.67/min
[90000], rate=65853.66/min
[100000], rate=65217.39/min
[110000], rate=65346.53/min
[120000], rate=66055.05/min
[130000], rate=66666.67/min
[140000], rate=67200.00/min
[150000], rate=67669.17/min
[160000], rate=68571.43/min
[170000], rate=68918.92/min
[180000], rate=69230.77/min
[190000], rate=69938.65/min
[200000], rate=71428.57/min
[210000], rate=72413.79/min
[220000], rate=73333.33/min
[230000], rate=73796.79/min
[240000], rate=74611.40/min
[250000], rate=75376.88/min
[260000], rate=76097.56/min
[270000], rate=76777.25/min
[280000], rate=72413.79/min
[290000], rate=67704.28/min
[300000], rate=64748.20/min
[310000], rate=62000.00/min
[320000], rate=60188.09/min
[330000], rate=58753.71/min
[340000], rate=57627.12/min
[350000], rate=56300.27/min
[360000], rate=55102.04/min
[370000], rate=54278.73/min
[380000], rate=53647.06/min
[390000], rate=53181.82/min
[400000], rate=52747.25/min
[410000], rate=52229.30/min
[420000], rate=51851.85/min
[430000], rate=51497.01/min
[440000], rate=51262.14/min
[450000], rate=51039.70/min
[460000], rate=50735.29/min
[470000], rate=50719.42/min
[480000], rate=50883.39/min
[490000], rate=50953.21/min
[500000], rate=50847.46/min
[510000], rate=50662.25/min
[520000], rate=50649.35/min
[530000], rate=50717.70/min
[540000], rate=50704.23/min
[550000], rate=50925.93/min
[560000], rate=50909.09/min
[570000], rate=51044.78/min
[580000], rate=50877.19/min
[590000], rate=50789.10/min
[600000], rate=50775.74/min
[610000], rate=50762.83/min
[620000], rate=50750.34/min
[630000], rate=50806.45/min
[640000], rate=50928.38/min
[650000], rate=51114.02/min
[660000], rate=51228.98/min
[670000], rate=51341.00/min
[680000], rate=51450.19/min
[690000], rate=51620.95/min
[700000], rate=51787.92/min
[710000], rate=52078.24/min
[720000], rate=52490.89/min
[730000], rate=52962.52/min
[740000], rate=53173.65/min
[750000], rate=53444.18/min
[760000], rate=53710.25/min
[770000], rate=53971.96/min
[780000], rate=54166.67/min
[790000], rate=54420.21/min
[800000], rate=54669.70/min
[810000], rate=54977.38/min
[820000], rate=55218.86/min
[830000], rate=55580.36/min
[840000], rate=55813.95/min
[850000], rate=56043.96/min
[860000], rate=56086.96/min
[870000], rate=56068.74/min
[880000], rate=56110.52/min
[890000], rate=56151.42/min
[900000], rate=56191.47/min
[910000], rate=56288.66/min
[920000], rate=56441.72/min
[930000], rate=56534.95/min
[940000], rate=56683.42/min
[950000], rate=56886.23/min
[960000], rate=57086.22/min
[970000], rate=57227.14/min
[980000], rate=57421.88/min
[990000], rate=57558.14/min
[1000000], rate=57803.47/min
[1010000], rate=58045.98/min
[1020000], rate=58230.26/min
[1030000], rate=58412.10/min
[1040000], rate=58481.72/min
[1050000], rate=58604.65/min
[1060000], rate=58617.51/min
[1070000], rate=58791.21/min
[1080000], rate=59232.18/min
[1090000], rate=59726.03/min
[1100000], rate=60218.98/min
[1110000], rate=60766.42/min
[1120000], rate=61257.98/min
[1130000], rate=61804.92/min
[1140000], rate=62295.08/min
[1150000], rate=62841.53/min
[1160000], rate=63330.30/min
[1170000], rate=63876.25/min
[1180000], rate=64363.64/min
[1190000], rate=64850.14/min
[1200000], rate=65217.39/min
[1210000], rate=65523.47/min
[1220000], rate=65768.19/min
[1230000], rate=66010.73/min
[1240000], rate=66192.17/min
[1250000], rate=66430.47/min
[1260000], rate=66607.93/min
[1270000], rate=66608.39/min
[1280000], rate=66898.95/min
[1290000], rate=67245.87/min
[1300000], rate=67241.38/min
[1310000], rate=67179.49/min
[1320000], rate=67232.60/min
[1330000], rate=67228.31/min
[1340000], rate=67224.08/min
[1350000], rate=67443.80/min
[1360000], rate=67886.86/min
[1370000], rate=68215.77/min
[1380000], rate=68429.75/min
[1390000], rate=68529.17/min
[1400000], rate=68739.77/min
[1410000], rate=69004.89/min
[1420000], rate=68987.85/min
[1430000], rate=68971.06/min
[1440000], rate=69120.00/min
[1450000], rate=69544.36/min
[1460000], rate=69968.05/min
[1470000], rate=70447.28/min
[1480000], rate=70869.91/min
[1490000], rate=71291.87/min
[1500000], rate=71770.33/min
[1510000], rate=72191.24/min
[1520000], rate=72669.32/min
[1530000], rate=73089.17/min
[1540000], rate=73566.88/min
[1550000], rate=73985.68/min
[1560000], rate=74403.82/min
[1570000], rate=74702.62/min
[1580000], rate=74822.42/min
[1590000], rate=74941.08/min
[1600000], rate=75235.11/min
[1610000], rate=75351.01/min
[1620000], rate=75524.48/min
[1630000], rate=75579.60/min
[1640000], rate=75634.13/min
[1650000], rate=75978.51/min
[1660000], rate=76321.84/min
[1670000], rate=76781.61/min
[1680000], rate=77241.38/min
[1690000], rate=77641.65/min
[1700000], rate=78041.32/min
[1710000], rate=78201.22/min
[1720000], rate=78122.63/min
[1730000], rate=78162.65/min
[1740000], rate=78026.91/min
[1750000], rate=78008.92/min
[1760000], rate=77991.14/min
[1770000], rate=78260.87/min
[1780000], rate=78645.07/min
[1790000], rate=78796.77/min
[1800000], rate=78947.37/min
[1810000], rate=78981.82/min
[1820000], rate=79073.14/min
[1830000], rate=79220.78/min
[1840000], rate=79310.34/min
[1850000], rate=79455.98/min
[1860000], rate=79487.18/min
[1870000], rate=79518.07/min
[1880000], rate=79773.69/min
[1890000], rate=79971.79/min
[1900000], rate=80000.00/min
[1910000], rate=79805.01/min
[1920000], rate=79778.39/min
[1930000], rate=79478.38/min
[1940000], rate=79345.60/min
[1950000], rate=79375.85/min
[1960000], rate=79405.81/min
[1970000], rate=79488.90/min
[1980000], rate=79571.33/min
[1990000], rate=79706.28/min
[2000000], rate=80000.00/min
[2010000], rate=80239.52/min
[2020000], rate=80478.09/min
[2030000], rate=80502.31/min
[2040000], rate=80526.32/min
[2050000], rate=80655.74/min
[2060000], rate=80784.31/min
[2070000], rate=80912.05/min
[2080000], rate=80986.37/min
[2090000], rate=81007.75/min
[2100000], rate=80614.20/min
[2110000], rate=79273.64/min
[2120000], rate=78908.19/min
[2130000], rate=78743.07/min
[2140000], rate=78676.47/min
[2150000], rate=78706.53/min
[2160000], rate=78688.52/min
[2170000], rate=78670.69/min
[2180000], rate=78653.04/min
[2190000], rate=78541.54/min
[2200000], rate=78106.51/min
[2210000], rate=78091.87/min
[2220000], rate=78123.17/min
[2230000], rate=78154.21/min
[2240000], rate=78184.99/min
[2250000], rate=78170.24/min
[2260000], rate=78020.71/min
[2270000], rate=77828.57/min
[2280000], rate=77288.14/min
[2290000], rate=76206.32/min
[2300000], rate=74959.26/min
[2310000], rate=73139.84/min
[2320000], rate=72500.00/min
[2330000], rate=71765.91/min
[2340000], rate=70909.09/min
[2350000], rate=70570.57/min
[2360000], rate=70099.01/min
[2370000], rate=68895.35/min
[2380000], rate=68325.36/min
[2390000], rate=67962.09/min
[2400000], rate=67415.73/min
[2410000], rate=67068.65/min
[2420000], rate=65880.22/min
[2430000], rate=64742.45/min
[2440000], rate=64013.99/min
[2450000], rate=62766.87/min
[2460000], rate=61474.39/min
[2470000], rate=60862.42/min
[2480000], rate=60194.17/min
[2490000], rate=59569.38/min
[2500000], rate=59124.95/min
[2510000], rate=58966.33/min
[2520000], rate=58924.40/min
[2530000], rate=58655.33/min
[2540000], rate=58190.15/min
[2550000], rate=57714.07/min
[2560000], rate=57164.12/min
[2570000], rate=56587.16/min
[2580000], rate=56046.34/min
[2590000], rate=55539.67/min
[2600000], rate=55496.26/min
[2610000], rate=55492.56/min
[2620000], rate=55469.30/min
[2630000], rate=55155.54/min
[2640000], rate=54904.68/min
[2650000], rate=54676.75/min
[2660000], rate=54470.99/min
[2670000], rate=54194.86/min
[2680000], rate=53941.63/min
[2690000], rate=53782.07/min
[2700000], rate=53553.72/min
[2710000], rate=53363.96/min
[2720000], rate=53090.44/min
[2730000], rate=52992.56/min
[2740000], rate=52912.78/min
[2750000], rate=52816.90/min
[2760000], rate=52738.85/min
[2770000], rate=52678.29/min
[2780000], rate=52634.90/min
[2790000], rate=52591.89/min
[2800000], rate=52549.26/min -building interval tree based on /tmp/nxf.47U0qZQTvp/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=54545.45/min
[20000], rate=52173.91/min
[30000], rate=54545.45/min
[40000], rate=54545.45/min
[50000], rate=54545.45/min
[60000], rate=55384.62/min
[70000], rate=56000.00/min
[80000], rate=56470.59/min
[90000], rate=57446.81/min
[100000], rate=58252.43/min
[110000], rate=60000.00/min
[120000], rate=61538.46/min
[130000], rate=62400.00/min
[140000], rate=64122.14/min
[150000], rate=65217.39/min
[160000], rate=66666.67/min
[170000], rate=65384.62/min
[180000], rate=62427.75/min
[190000], rate=59375.00/min
[200000], rate=56603.77/min
[210000], rate=54310.34/min
[220000], rate=52380.95/min
[230000], rate=51301.12/min
[240000], rate=50000.00/min
[250000], rate=48859.93/min
[260000], rate=48297.21/min
[270000], rate=48071.22/min
[280000], rate=47592.07/min
[290000], rate=47154.47/min
[300000], rate=47120.42/min
[310000], rate=46969.70/min
[320000], rate=47058.82/min
[330000], rate=47142.86/min
[340000], rate=47222.22/min
[350000], rate=47404.06/min
[360000], rate=47787.61/min
[370000], rate=48156.18/min
[380000], rate=48510.64/min
[390000], rate=48851.77/min
[400000], rate=49484.54/min
[410000], rate=49898.58/min
[420000], rate=50299.40/min
[430000], rate=50588.24/min
[440000], rate=50965.25/min
[450000], rate=51428.57/min
[460000], rate=51879.70/min
[470000], rate=52222.22/min
[480000], rate=52554.74/min
[490000], rate=52877.70/min
[500000], rate=53285.97/min
[510000], rate=53684.21/min
[520000], rate=54166.67/min
[530000], rate=54545.45/min
[540000], rate=55008.49/min
[550000], rate=55649.24/min
[560000], rate=55906.82/min
[570000], rate=55072.46/min
[580000], rate=54205.61/min
[590000], rate=53636.36/min
[600000], rate=53097.35/min
[610000], rate=52510.76/min
[620000], rate=52100.84/min
[630000], rate=51498.64/min
[640000], rate=51405.62/min
[650000], rate=50913.84/min
[660000], rate=50445.86/min
[670000], rate=50439.15/min
[680000], rate=50061.35/min
[690000], rate=49699.88/min
[700000], rate=49353.70/min
[710000], rate=49191.69/min
[720000], rate=48979.59/min
[730000], rate=48775.06/min
[740000], rate=48577.68/min
[750000], rate=48387.10/min
[760000], rate=48305.08/min
[770000], rate=48225.47/min
[780000], rate=48148.15/min
[790000], rate=48121.83/min
[800000], rate=48096.19/min
[810000], rate=48071.22/min
[820000], rate=48093.84/min
[830000], rate=48162.48/min
[840000], rate=48183.56/min
[850000], rate=48295.45/min
[860000], rate=48405.25/min
[870000], rate=48558.14/min
[880000], rate=48708.49/min
[890000], rate=48901.10/min
[900000], rate=49315.07/min
[910000], rate=49591.28/min
[920000], rate=49774.57/min
[930000], rate=49955.24/min
[940000], rate=50133.33/min
[950000], rate=50308.91/min
[960000], rate=50482.03/min
[970000], rate=50741.06/min
[980000], rate=50953.21/min
[990000], rate=51162.79/min
[1000000], rate=51413.88/min
[1010000], rate=50753.77/min
[1020000], rate=50163.93/min
[1030000], rate=49598.72/min
[1040000], rate=49211.36/min
[1050000], rate=48611.11/min
[1060000], rate=48218.35/min
[1070000], rate=47839.05/min
[1080000], rate=47472.53/min
[1090000], rate=47254.34/min
[1100000], rate=47311.83/min
[1110000], rate=47133.76/min
[1120000], rate=47025.89/min
[1130000], rate=46855.56/min
[1140000], rate=46785.23/min
[1150000], rate=46558.70/min
[1160000], rate=46524.06/min
[1170000], rate=46428.57/min
[1180000], rate=46395.81/min
[1190000], rate=46423.93/min
[1200000], rate=46421.66/min
[1210000], rate=46419.44/min
[1220000], rate=46446.70/min
[1230000], rate=46473.55/min
[1240000], rate=46529.08/min
[1250000], rate=46468.40/min
[1260000], rate=46465.89/min
[1270000], rate=46577.02/min
[1280000], rate=46630.24/min
[1290000], rate=46654.61/min
[1300000], rate=46539.38/min
[1310000], rate=46563.98/min
[1320000], rate=46588.24/min
[1330000], rate=46557.76/min
[1340000], rate=46473.99/min
[1350000], rate=46365.20/min
[1360000], rate=46389.99/min
[1370000], rate=46309.86/min
[1380000], rate=46051.17/min
[1390000], rate=45849.37/min
[1400000], rate=45876.57/min
[1410000], rate=45953.29/min
[1420000], rate=45979.49/min
[1430000], rate=46030.04/min
[1440000], rate=46080.00/min
[1450000], rate=46178.34/min
[1460000], rate=46251.32/min
[1470000], rate=46323.53/min
[1480000], rate=46443.51/min
[1490000], rate=46465.70/min
[1500000], rate=46272.49/min
[1510000], rate=45919.92/min
[1520000], rate=45668.50/min
[1530000], rate=45400.59/min
[1540000], rate=45316.33/min
[1550000], rate=45432.34/min
[1560000], rate=45614.04/min
[1570000], rate=45507.25/min
[1580000], rate=45250.60/min
[1590000], rate=45234.71/min
[1600000], rate=45325.78/min
[1610000], rate=45373.41/min
[1620000], rate=45420.56/min
[1630000], rate=45488.37/min
[1640000], rate=45534.47/min
[1650000], rate=45371.22/min
[1660000], rate=45108.70/min
[1670000], rate=45094.51/min
[1680000], rate=45080.50/min
[1690000], rate=45066.67/min
[1700000], rate=44776.12/min
[1710000], rate=44803.49/min
[1720000], rate=44811.12/min
[1730000], rate=44818.65/min
[1740000], rate=44864.63/min
[1750000], rate=44737.96/min
[1760000], rate=44519.39/min
[1770000], rate=44546.98/min
[1780000], rate=44574.29/min
[1790000], rate=44416.87/min
[1800000], rate=44153.72/min
[1810000], rate=44182.26/min
[1820000], rate=44264.29/min
[1830000], rate=44345.72/min
[1840000], rate=44426.56/min
[1850000], rate=44524.67/min
[1860000], rate=44622.15/min
[1870000], rate=44736.84/min
[1880000], rate=44761.90/min
[1890000], rate=44875.35/min
[1900000], rate=45005.92/min
[1910000], rate=45118.11/min
[1920000], rate=45265.23/min
[1930000], rate=45393.96/min
[1940000], rate=45522.10/min
[1950000], rate=45631.83/min
[1960000], rate=45723.17/min
[1970000], rate=45743.03/min
[1980000], rate=45745.09/min
[1990000], rate=45764.66/min
[2000000], rate=45784.05/min
[2010000], rate=45751.14/min
[2020000], rate=45804.99/min
[2030000], rate=45858.43/min
[2040000], rate=45894.26/min
[2050000], rate=45998.50/min
[2060000], rate=45828.70/min
[2070000], rate=45611.46/min
[2080000], rate=45414.85/min
[2090000], rate=45336.23/min
[2100000], rate=45405.41/min
[2110000], rate=45085.47/min
[2120000], rate=45058.45/min
[2130000], rate=45159.01/min
[2140000], rate=45243.13/min
[2150000], rate=45326.77/min
[2160000], rate=45425.87/min
[2170000], rate=45508.56/min
[2180000], rate=45670.39/min
[2190000], rate=45863.87/min
[2200000], rate=46073.30/min
[2210000], rate=46266.57/min
[2220000], rate=46459.71/min
[2230000], rate=46636.46/min
[2240000], rate=46537.40/min
[2250000], rate=46616.02/min
[2260000], rate=46726.40/min
[2270000], rate=46820.21/min
[2280000], rate=46913.58/min
[2290000], rate=47022.59/min
[2300000], rate=47131.15/min
[2310000], rate=47142.86/min
[2320000], rate=47154.47/min
[2330000], rate=47054.86/min
[2340000], rate=47082.49/min
[2350000], rate=47125.67/min
[2360000], rate=47137.15/min
[2370000], rate=47086.09/min
[2380000], rate=47035.57/min
[2390000], rate=47155.54/min
[2400000], rate=47290.64/min
[2410000], rate=47254.90/min
[2420000], rate=47188.82/min
[2430000], rate=47123.46/min
[2440000], rate=47073.95/min
[2450000], rate=47055.06/min
[2460000], rate=47051.32/min
[2470000], rate=47047.62/min
[2480000], rate=47088.61/min
[2490000], rate=47173.98/min
[2500000], rate=47244.09/min
[2510000], rate=47313.85/min
[2520000], rate=47368.42/min
[2530000], rate=47437.50/min
[2540000], rate=47506.23/min
[2550000], rate=47574.63/min
[2560000], rate=47613.14/min
[2570000], rate=47577.91/min
[2580000], rate=47470.10/min
[2590000], rate=47378.05/min
[2600000], rate=47358.83/min
[2610000], rate=47311.18/min
[2620000], rate=47278.20/min
[2630000], rate=47273.82/min
[2640000], rate=47255.37/min
[2650000], rate=47293.28/min
[2660000], rate=47373.11/min
[2670000], rate=47452.61/min
[2680000], rate=47545.83/min
[2690000], rate=47596.58/min
[2700000], rate=47605.05/min
[2710000], rate=47599.53/min
[2720000], rate=47621.83/min
[2730000], rate=47630.13/min
[2740000], rate=47638.37/min
[2750000], rate=47646.55/min
[2760000], rate=47654.68/min
[2770000], rate=47649.08/min
[2780000], rate=47629.93/min
[2790000], rate=47705.90/min -building interval tree based on /tmp/nxf.47U0qZQTvp/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
[10000], rate=60000.00/min
[20000], rate=66666.67/min
[30000], rate=72000.00/min
[40000], rate=77419.35/min
[50000], rate=76923.08/min
[60000], rate=78260.87/min
[70000], rate=79245.28/min
[80000], rate=81355.93/min
[90000], rate=83076.92/min
[100000], rate=84507.04/min
[110000], rate=84615.38/min
[120000], rate=85714.29/min
[130000], rate=84782.61/min
[140000], rate=81553.40/min
[150000], rate=80357.14/min
[160000], rate=79338.84/min
[170000], rate=79069.77/min
[180000], rate=79411.76/min
[190000], rate=79720.28/min
[200000], rate=80536.91/min
[210000], rate=80769.23/min
[220000], rate=81481.48/min
[230000], rate=79768.79/min
[240000], rate=76595.74/min
[250000], rate=73529.41/min
[260000], rate=70909.09/min
[270000], rate=68936.17/min
[280000], rate=67469.88/min
[290000], rate=66159.70/min
[300000], rate=65693.43/min
[310000], rate=64583.33/min
[320000], rate=63787.38/min
[330000], rate=63057.32/min
[340000], rate=62576.69/min
[350000], rate=62314.54/min
[360000], rate=62427.75/min
[370000], rate=62359.55/min
[380000], rate=62465.75/min
[390000], rate=62734.58/min
[400000], rate=62827.23/min
[410000], rate=63076.92/min
[420000], rate=63476.07/min
[430000], rate=63861.39/min
[440000], rate=64233.58/min
[450000], rate=64903.85/min
[460000], rate=64335.66/min
[470000], rate=63228.70/min
[480000], rate=62472.89/min
[490000], rate=61635.22/min
[500000], rate=61224.49/min
[510000], rate=60474.31/min
[520000], rate=60000.00/min
[530000], rate=59662.29/min
[540000], rate=59558.82/min
[550000], rate=59459.46/min
[560000], rate=59574.47/min
[570000], rate=59581.88/min
[580000], rate=59691.25/min
[590000], rate=60000.00/min
[600000], rate=60200.67/min
[610000], rate=60396.04/min
[620000], rate=60586.32/min
[630000], rate=61066.24/min
[640000], rate=61440.00/min
[650000], rate=61904.76/min
[660000], rate=62068.97/min
[670000], rate=62325.58/min
[680000], rate=61077.84/min
[690000], rate=59312.32/min
[700000], rate=57851.24/min
[710000], rate=56423.84/min
[720000], rate=55598.46/min
[730000], rate=55233.29/min
[740000], rate=55639.10/min
[750000], rate=56039.85/min
[760000], rate=56505.58/min
[770000], rate=56548.35/min
[780000], rate=55780.69/min
[790000], rate=54988.40/min
[800000], rate=54545.45/min
[810000], rate=54060.07/min
[820000], rate=53711.79/min
[830000], rate=53433.48/min
[840000], rate=53108.54/min
[850000], rate=52904.56/min
[860000], rate=52706.84/min
[870000], rate=52409.64/min
[880000], rate=52122.41/min
[890000], rate=51945.53/min
[900000], rate=51773.73/min
[910000], rate=51558.07/min
[920000], rate=51444.55/min
[930000], rate=51192.66/min
[940000], rate=50902.53/min
[950000], rate=50802.14/min
[960000], rate=50748.90/min
[970000], rate=50477.02/min
[980000], rate=50385.60/min
[990000], rate=50253.81/min
[1000000], rate=50041.70/min
[1010000], rate=49917.63/min
[1020000], rate=49635.04/min
[1030000], rate=49598.72/min
[1040000], rate=49642.00/min
[1050000], rate=49528.30/min
[1060000], rate=49417.25/min
[1070000], rate=49460.71/min
[1080000], rate=49390.24/min
[1090000], rate=49395.77/min
[1100000], rate=49401.20/min
[1110000], rate=49333.33/min
[1120000], rate=49411.76/min
[1130000], rate=49452.95/min
[1140000], rate=49529.33/min
[1150000], rate=49604.60/min
[1160000], rate=49714.29/min
[1170000], rate=49857.95/min
[1180000], rate=50000.00/min
[1190000], rate=50175.69/min
[1200000], rate=50314.47/min
[1210000], rate=50486.79/min
[1220000], rate=50622.41/min
[1230000], rate=50791.47/min
[1240000], rate=50993.83/min
[1250000], rate=51194.54/min
[1260000], rate=51393.61/min
[1270000], rate=51591.06/min
[1280000], rate=51509.05/min
[1290000], rate=50854.14/min
[1300000], rate=50193.05/min
[1310000], rate=49652.56/min
[1320000], rate=49070.63/min
[1330000], rate=48540.15/min
[1340000], rate=48086.12/min
[1350000], rate=47507.33/min
[1360000], rate=47167.63/min
[1370000], rate=46309.86/min
[1380000], rate=45948.95/min
[1390000], rate=45105.46/min
[1400000], rate=44800.00/min
[1410000], rate=44738.23/min
[1420000], rate=44167.96/min
[1430000], rate=43753.19/min
[1440000], rate=43373.49/min
[1450000], rate=43240.56/min
[1460000], rate=42773.44/min
[1470000], rate=42241.38/min
[1480000], rate=41729.32/min
[1490000], rate=41484.92/min
[1500000], rate=40946.31/min
[1510000], rate=40536.91/min
[1520000], rate=40140.85/min
[1530000], rate=39861.05/min
[1540000], rate=39673.68/min
[1550000], rate=39760.58/min
[1560000], rate=39846.74/min
[1570000], rate=39397.74/min
[1580000], rate=39060.57/min
[1590000], rate=38748.98/min
[1600000], rate=38430.74/min
[1610000], rate=38076.47/min
[1620000], rate=37806.30/min
[1630000], rate=37428.24/min
[1640000], rate=37048.19/min
[1650000], rate=36981.70/min
[1660000], rate=36902.56/min
[1670000], rate=36919.68/min
[1680000], rate=37004.41/min
[1690000], rate=37074.95/min
[1700000], rate=37212.70/min
[1710000], rate=37349.84/min
[1720000], rate=37431.99/min
[1730000], rate=37513.55/min
[1740000], rate=37594.53/min
[1750000], rate=37729.07/min
[1760000], rate=37808.81/min
[1770000], rate=37887.98/min
[1780000], rate=37953.09/min
[1790000], rate=37990.80/min
[1800000], rate=38081.81/min
[1810000], rate=38172.23/min
[1820000], rate=38088.59/min
[1830000], rate=37979.94/min
[1840000], rate=37977.30/min
[1850000], rate=37819.42/min
[1860000], rate=37437.10/min
[1870000], rate=37090.91/min
[1880000], rate=36862.75/min
[1890000], rate=36557.06/min
[1900000], rate=36317.30/min
[1910000], rate=36151.42/min
[1920000], rate=35876.67/min
[1930000], rate=35663.69/min
[1940000], rate=35455.38/min
[1950000], rate=35476.05/min
[1960000], rate=35560.93/min
[1970000], rate=35613.14/min
[1980000], rate=35654.26/min
[1990000], rate=35684.40/min
[2000000], rate=35724.92/min
[2010000], rate=35659.37/min
[2020000], rate=35469.71/min
[2030000], rate=35222.67/min
[2040000], rate=35011.44/min
[2050000], rate=34696.76/min
[2060000], rate=34641.26/min
[2070000], rate=34702.43/min
[2080000], rate=34772.92/min
[2090000], rate=34669.62/min
[2100000], rate=34501.64/min
[2110000], rate=34430.24/min
[2120000], rate=34508.95/min
[2130000], rate=34587.28/min
[2140000], rate=34674.59/min
[2150000], rate=34761.52/min
[2160000], rate=34857.45/min
[2170000], rate=34953.02/min
[2180000], rate=35029.46/min
[2190000], rate=35124.30/min
[2200000], rate=35218.78/min
[2210000], rate=35275.34/min
[2220000], rate=35312.83/min
[2230000], rate=35415.56/min
[2240000], rate=35564.96/min
[2250000], rate=35704.84/min
[2260000], rate=35863.53/min
[2270000], rate=36012.69/min
[2280000], rate=36161.78/min
[2290000], rate=36234.18/min
[2300000], rate=36344.48/min
[2310000], rate=36425.76/min
[2320000], rate=36506.69/min
[2330000], rate=36587.28/min
[2340000], rate=36677.12/min
[2350000], rate=36556.91/min
[2360000], rate=36438.50/min
[2370000], rate=36284.77/min
[2380000], rate=36179.38/min
[2390000], rate=36039.21/min
[2400000], rate=35955.06/min
[2410000], rate=35809.81/min
[2420000], rate=35658.15/min
[2430000], rate=35587.01/min
[2440000], rate=35482.31/min
[2450000], rate=35362.04/min
[2460000], rate=35243.55/min
[2470000], rate=35135.14/min
[2480000], rate=35053.00/min
[2490000], rate=34963.73/min
[2500000], rate=34867.50/min
[2510000], rate=34877.26/min
[2520000], rate=34806.63/min
[2530000], rate=34744.79/min
[2540000], rate=34683.66/min
[2550000], rate=34623.22/min
[2560000], rate=34555.68/min
[2570000], rate=34504.36/min
[2580000], rate=34453.59/min
[2590000], rate=34388.14/min
[2600000], rate=34361.23/min
[2610000], rate=34251.97/min
[2620000], rate=34048.08/min
[2630000], rate=33869.93/min
[2640000], rate=33802.82/min
[2650000], rate=33786.66/min
[2660000], rate=33756.35/min
[2670000], rate=33776.09/min
[2680000], rate=33788.61/min
[2690000], rate=33808.13/min
[2700000], rate=33841.65/min
[2710000], rate=33860.89/min
[2720000], rate=33887.04/min
[2730000], rate=33913.04/min
[2740000], rate=33966.94/min
[2750000], rate=34006.60/min
[2760000], rate=34053.05/min
[2770000], rate=34099.30/min -building interval tree based on /tmp/nxf.47U0qZQTvp/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=100000.00/min
[20000], rate=109090.91/min
[30000], rate=105882.35/min
[40000], rate=96000.00/min
[50000], rate=93750.00/min
[60000], rate=97297.30/min
[70000], rate=113513.51/min
[80000], rate=123076.92/min
[90000], rate=125581.40/min
[100000], rate=125000.00/min
[110000], rate=124528.30/min
[120000], rate=120000.00/min
[130000], rate=125806.45/min
[140000], rate=125373.13/min
[150000], rate=128571.43/min
[160000], rate=124675.32/min
[170000], rate=125925.93/min
[180000], rate=131707.32/min
[190000], rate=137349.40/min
[200000], rate=144578.31/min
[210000], rate=151807.23/min
[220000], rate=157142.86/min
[230000], rate=160465.12/min
[240000], rate=156521.74/min
[250000], rate=151515.15/min
[260000], rate=145794.39/min
[270000], rate=142105.26/min
[280000], rate=138842.98/min
[290000], rate=139200.00/min
[300000], rate=144000.00/min
[310000], rate=145312.50/min
[320000], rate=145454.55/min
[330000], rate=145588.24/min
[340000], rate=144680.85/min
[350000], rate=141891.89/min
[360000], rate=143046.36/min
[370000], rate=143225.81/min
[380000], rate=143396.23/min
[390000], rate=142682.93/min
[400000], rate=142857.14/min
[410000], rate=145562.13/min
[420000], rate=149112.43/min
[430000], rate=152662.72/min
[440000], rate=156213.02/min
[450000], rate=158823.53/min
[460000], rate=159537.57/min
[470000], rate=156666.67/min
[480000], rate=155675.68/min
[490000], rate=153926.70/min
[500000], rate=150000.00/min
[510000], rate=147826.09/min
[520000], rate=145794.39/min
[530000], rate=145871.56/min
[540000], rate=148623.85/min
[550000], rate=149321.27/min
[560000], rate=149333.33/min
[570000], rate=148695.65/min
[580000], rate=148717.95/min
[590000], rate=146887.97/min
[600000], rate=146938.78/min
[610000], rate=146987.95/min
[620000], rate=147035.57/min
[630000], rate=145945.95/min
[640000], rate=146007.60/min
[650000], rate=147169.81/min
[660000], rate=145588.24/min
[670000], rate=145126.35/min
[680000], rate=144169.61/min
[690000], rate=142268.04/min
[700000], rate=140939.60/min
[710000], rate=139215.69/min
[720000], rate=140259.74/min
[730000], rate=141747.57/min
[740000], rate=142307.69/min
[750000], rate=142405.06/min
[760000], rate=142056.07/min
[770000], rate=142153.85/min
[780000], rate=141389.73/min
[790000], rate=141492.54/min
[800000], rate=141592.92/min
[810000], rate=141279.07/min
[820000], rate=140974.21/min
[830000], rate=141477.27/min
[840000], rate=141573.03/min
[850000], rate=129770.99/min
[860000], rate=115695.07/min
[870000], rate=104609.22/min
[880000], rate=95825.77/min
[890000], rate=89447.24/min
[900000], rate=84639.50/min
[910000], rate=79941.43/min
[920000], rate=75720.16/min
[930000], rate=71907.22/min
[940000], rate=68446.60/min
[950000], rate=66125.29/min
[960000], rate=64000.00/min
[970000], rate=62312.63/min
[980000], rate=60122.70/min
[990000], rate=58064.52/min
[1000000], rate=56657.22/min
[1010000], rate=55191.26/min
[1020000], rate=53731.34/min
[1030000], rate=52417.30/min
[1040000], rate=51189.50/min
[1050000], rate=50279.33/min
[1060000], rate=49264.14/min
[1070000], rate=48489.43/min
[1080000], rate=47299.27/min
[1090000], rate=46284.50/min
[1100000], rate=45329.67/min
[1110000], rate=44818.30/min
[1120000], rate=44181.46/min
[1130000], rate=43629.34/min
[1140000], rate=43127.36/min
[1150000], rate=42409.34/min
[1160000], rate=41978.29/min
[1170000], rate=41415.93/min
[1180000], rate=40972.22/min
[1190000], rate=40248.03/min
[1200000], rate=39867.11/min
[1210000], rate=39499.46/min
[1220000], rate=38915.47/min
[1230000], rate=38497.65/min
[1240000], rate=37901.17/min
[1250000], rate=37257.82/min
[1260000], rate=36681.22/min
[1270000], rate=36216.73/min
[1280000], rate=35654.60/min
[1290000], rate=34833.48/min
[1300000], rate=34361.23/min
[1310000], rate=33879.31/min
[1320000], rate=33431.83/min
[1330000], rate=33333.33/min
[1340000], rate=32950.82/min
[1350000], rate=32608.70/min
[1360000], rate=32342.45/min
[1370000], rate=32121.92/min
[1380000], rate=32192.85/min
[1390000], rate=32263.06/min
[1400000], rate=32282.86/min
[1410000], rate=32069.75/min
[1420000], rate=31838.57/min
[1430000], rate=31754.26/min
[1440000], rate=31555.88/min
[1450000], rate=31407.94/min
[1460000], rate=31397.85/min
[1470000], rate=31421.45/min
[1480000], rate=31467.04/min
[1490000], rate=31545.52/min
[1500000], rate=31601.12/min
[1510000], rate=31678.32/min
[1520000], rate=31754.87/min
[1530000], rate=31808.73/min
[1540000], rate=31840.11/min
[1550000], rate=31903.95/min
[1560000], rate=31945.39/min
[1570000], rate=31824.32/min
[1580000], rate=31515.96/min
[1590000], rate=31464.38/min
[1600000], rate=31537.45/min
[1610000], rate=31589.27/min
[1620000], rate=31661.24/min
[1630000], rate=31732.64/min
[1640000], rate=31690.82/min
[1650000], rate=31781.70/min
[1660000], rate=31872.00/min
[1670000], rate=31759.11/min
[1680000], rate=31828.23/min
[1690000], rate=31916.90/min
[1700000], rate=32005.02/min
[1710000], rate=32112.68/min
[1720000], rate=32209.74/min
[1730000], rate=32316.31/min
[1740000], rate=32412.29/min
[1750000], rate=32377.43/min
[1760000], rate=32323.23/min
[1770000], rate=32269.83/min
[1780000], rate=32207.48/min
[1790000], rate=32184.60/min
[1800000], rate=32181.17/min
[1810000], rate=32206.41/min
[1820000], rate=32317.25/min
[1830000], rate=32427.64/min
[1840000], rate=32451.50/min
[1850000], rate=32465.63/min
[1860000], rate=32460.73/min
[1870000], rate=32287.77/min
[1880000], rate=32136.75/min
[1890000], rate=31898.73/min
[1900000], rate=31781.43/min
[1910000], rate=31648.72/min
[1920000], rate=31527.09/min
[1930000], rate=31458.84/min
[1940000], rate=31417.00/min
[1950000], rate=31342.08/min
[1960000], rate=31427.04/min
[1970000], rate=31436.17/min
[1980000], rate=31353.92/min
[1990000], rate=31429.32/min
[2000000], rate=31504.33/min
[2010000], rate=31587.22/min
[2020000], rate=31677.99/min
[2030000], rate=31760.10/min
[2040000], rate=31850.12/min
[2050000], rate=31939.76/min
[2060000], rate=32053.94/min
[2070000], rate=32142.86/min
[2080000], rate=32239.73/min
[2090000], rate=32327.92/min
[2100000], rate=32432.43/min
[2110000], rate=32544.99/min
[2120000], rate=32648.87/min
[2130000], rate=32668.71/min
[2140000], rate=32597.11/min
[2150000], rate=32518.28/min
[2160000], rate=32481.20/min
[2170000], rate=32396.12/min
[2180000], rate=32336.22/min
[2190000], rate=32285.01/min
[2200000], rate=32250.18/min
[2210000], rate=32223.57/min
[2220000], rate=32212.82/min
[2230000], rate=32225.43/min
[2240000], rate=32230.22/min
[2250000], rate=32250.36/min
[2260000], rate=32193.73/min
[2270000], rate=32092.37/min
[2280000], rate=32120.22/min
[2290000], rate=32147.87/min
[2300000], rate=32190.34/min
[2310000], rate=32217.57/min
[2320000], rate=32252.09/min
[2330000], rate=32293.83/min
[2340000], rate=32327.88/min
[2350000], rate=32369.15/min
[2360000], rate=32425.01/min
[2370000], rate=32465.75/min
[2380000], rate=32513.66/min
[2390000], rate=32561.31/min
[2400000], rate=32616.08/min
[2410000], rate=32677.97/min
[2420000], rate=32710.07/min
[2430000], rate=32764.04/min
[2440000], rate=32817.75/min
[2450000], rate=32885.91/min
[2460000], rate=32953.78/min
[2470000], rate=33036.11/min
[2480000], rate=33110.81/min
[2490000], rate=33192.62/min
[2500000], rate=33274.18/min
[2510000], rate=33355.48/min
[2520000], rate=33443.93/min
[2530000], rate=33554.38/min
[2540000], rate=33465.09/min
[2550000], rate=33406.11/min
[2560000], rate=33160.62/min
[2570000], rate=32892.49/min
[2580000], rate=32775.78/min
[2590000], rate=32764.07/min
[2600000], rate=32759.34/min
[2610000], rate=32706.77/min
[2620000], rate=32627.65/min
[2630000], rate=32643.77/min
[2640000], rate=32659.79/min
[2650000], rate=32669.00/min
[2660000], rate=32691.52/min
[2670000], rate=32727.27/min
[2680000], rate=32756.16/min
[2690000], rate=32798.21/min
[2700000], rate=32826.75/min
[2710000], rate=32861.76/min
[2720000], rate=32896.59/min
[2730000], rate=32937.86/min
[2740000], rate=32978.94/min
[2750000], rate=33033.03/min
[2760000], rate=33080.30/min
[2770000], rate=33133.97/min
[2780000], rate=33194.03/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.47U0qZQTvp/ctat_genome_lib_build_dir --filt_file /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
0.00 reads per min processed...
12000000.00 reads per min processed...
18000000.00 reads per min processed...
12000000.00 reads per min processed...
15000000.00 reads per min processed...
18000000.00 reads per min processed...
14000000.00 reads per min processed...
12000000.00 reads per min processed...
10800000.00 reads per min processed...
10000000.00 reads per min processed...
8250000.00 reads per min processed...
8000000.00 reads per min processed...
7090909.09 reads per min processed...
7000000.00 reads per min processed...
6923076.92 reads per min processed...
6857142.86 reads per min processed...
6375000.00 reads per min processed...
6352941.18 reads per min processed...
6333333.33 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
5750000.00 reads per min processed...
5760000.00 reads per min processed...
5555555.56 reads per min processed...
5571428.57 reads per min processed...
5586206.90 reads per min processed...
5419354.84 reads per min processed...
5437500.00 reads per min processed...
5454545.45 reads per min processed...
5314285.71 reads per min processed...
5333333.33 reads per min processed...
5210526.32 reads per min processed...
5230769.23 reads per min processed...
5121951.22 reads per min processed...
5142857.14 reads per min processed...
5162790.70 reads per min processed...
5181818.18 reads per min processed...
5200000.00 reads per min processed...
5217391.30 reads per min processed...
5234042.55 reads per min processed...
5250000.00 reads per min processed...
5265306.12 reads per min processed...
5176470.59 reads per min processed...
5192307.69 reads per min processed...
5207547.17 reads per min processed...
5222222.22 reads per min processed...
5142857.14 reads per min processed...
5157894.74 reads per min processed...
5172413.79 reads per min processed...
5186440.68 reads per min processed...
5200000.00 reads per min processed...
5213114.75 reads per min processed...
5225806.45 reads per min processed...
5322580.65 reads per min processed...
5333333.33 reads per min processed...
5428571.43 reads per min processed...
5437500.00 reads per min processed...
5531250.00 reads per min processed...
5538461.54 reads per min processed...
5630769.23 reads per min processed...
5552238.81 reads per min processed...
5558823.53 reads per min processed...
5565217.39 reads per min processed...
5571428.57 reads per min processed...
5500000.00 reads per min processed...
5506849.32 reads per min processed...
5513513.51 reads per min processed...
5520000.00 reads per min processed...
5526315.79 reads per min processed...
5461538.46 reads per min processed...
5468354.43 reads per min processed...
5475000.00 reads per min processed...
5481481.48 reads per min processed...
5421686.75 reads per min processed...
5428571.43 reads per min processed...
5435294.12 reads per min processed...
5441860.47 reads per min processed...
5386363.64 reads per min processed...
5393258.43 reads per min processed...
5400000.00 reads per min processed...
5406593.41 reads per min processed...
5413043.48 reads per min processed...
5361702.13 reads per min processed...
5425531.91 reads per min processed...
5375000.00 reads per min processed...
5381443.30 reads per min processed...
5387755.10 reads per min processed...
5393939.39 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.47U0qZQTvp/1173_RQT_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.47U0qZQTvp/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -417112.101793
EM: Round [1] log likelihood: -416641.664369
EM: Round [2] log likelihood: -416466.452006
EM: Round [3] log likelihood: -416383.910279
EM: Round [4] log likelihood: -416340.112208
EM: Round [5] log likelihood: -416315.165101
EM: Round [6] log likelihood: -416300.173444
EM: Round [7] log likelihood: -416290.713816
EM: Round [8] log likelihood: -416284.460165
EM: Round [9] log likelihood: -416280.143784
EM: Round [10] log likelihood: -416277.048553
EM: Round [11] log likelihood: -416274.755095
EM: Round [12] log likelihood: -416273.008146
EM: Round [13] log likelihood: -416271.646274
EM: Round [14] log likelihood: -416270.563636
EM: Round [15] log likelihood: -416269.688529
EM: Round [16] log likelihood: -416268.970949
EM: Round [17] log likelihood: -416268.375137
EM: Round [18] log likelihood: -416267.874954
EM: Round [19] log likelihood: -416267.450927
EM: Round [20] log likelihood: -416267.088309
EM: Round [21] log likelihood: -416266.775765
EM: Round [22] log likelihood: -416266.504468
EM: Round [23] log likelihood: -416266.267463
EM: Round [24] log likelihood: -416266.059205
EM: Round [25] log likelihood: -416265.875237
EM: Round [26] log likelihood: -416265.711935
EM: Round [27] log likelihood: -416265.566333
EM: Round [28] log likelihood: -416265.435978
EM: Round [29] log likelihood: -416265.318834
EM: Round [30] log likelihood: -416265.213190
EM: Round [31] log likelihood: -416265.117609
EM: Round [32] log likelihood: -416265.030867
EM: Round [33] log likelihood: -416264.951922
EM: Round [34] log likelihood: -416264.879883
EM: Round [35] log likelihood: -416264.813977
EM: Round [36] log likelihood: -416264.753541
EM: Round [37] log likelihood: -416264.697994
EM: Round [38] log likelihood: -416264.646831
EM: Round [39] log likelihood: -416264.599610
EM: Round [40] log likelihood: -416264.555943
EM: Round [41] log likelihood: -416264.515487
EM: Round [42] log likelihood: -416264.477939
EM: Round [43] log likelihood: -416264.443030
EM: Round [44] log likelihood: -416264.410522
EM: Round [45] log likelihood: -416264.380201
EM: Round [46] log likelihood: -416264.351879
EM: Round [47] log likelihood: -416264.325384
EM: Round [48] log likelihood: -416264.300565
EM: Round [49] log likelihood: -416264.277283
EM: Round [50] log likelihood: -416264.255414
EM: Round [51] log likelihood: -416264.234848
EM: Round [52] log likelihood: -416264.215484
EM: Round [53] log likelihood: -416264.197229
EM: Round [54] log likelihood: -416264.180001
EM: Round [55] log likelihood: -416264.163724
EM: Round [56] log likelihood: -416264.148330
EM: Round [57] log likelihood: -416264.133756
EM: Round [58] log likelihood: -416264.119945
EM: Round [59] log likelihood: -416264.106844
EM: Round [60] log likelihood: -416264.094406
EM: Round [61] log likelihood: -416264.082588
EM: Round [62] log likelihood: -416264.071348
EM: Round [63] log likelihood: -416264.060649
EM: Round [64] log likelihood: -416264.050458
EM: Round [65] log likelihood: -416264.040743
EM: Round [66] log likelihood: -416264.031476
EM: Round [67] log likelihood: -416264.022628
EM: Round [68] log likelihood: -416264.014177
EM: Round [69] log likelihood: -416264.006097
EM: Round [70] log likelihood: -416263.998370
EM: Round [71] log likelihood: -416263.990973
EM: Round [72] log likelihood: -416263.983890
EM: Round [73] log likelihood: -416263.977104
EM: Round [74] log likelihood: -416263.970597
EM: Round [75] log likelihood: -416263.964356
EM: Round [76] log likelihood: -416263.958367
EM: Round [77] log likelihood: -416263.952616
EM: Round [78] log likelihood: -416263.947092
EM: Round [79] log likelihood: -416263.941783
EM: Round [80] log likelihood: -416263.936679
EM: Round [81] log likelihood: -416263.931770
EM: Round [82] log likelihood: -416263.927047
EM: Round [83] log likelihood: -416263.922500
EM: Round [84] log likelihood: -416263.918122
EM: Round [85] log likelihood: -416263.913904
EM: Round [86] log likelihood: -416263.909840
EM: Round [87] log likelihood: -416263.905923
EM: Round [88] log likelihood: -416263.902146
EM: Round [89] log likelihood: -416263.898502
EM: Round [90] log likelihood: -416263.894987
EM: Round [91] log likelihood: -416263.891595
EM: Round [92] log likelihood: -416263.888320
EM: Round [93] log likelihood: -416263.885158
EM: Round [94] log likelihood: -416263.882104
EM: Round [95] log likelihood: -416263.879153
EM: Round [96] log likelihood: -416263.876302
EM: Round [97] log likelihood: -416263.873546
EM: Round [98] log likelihood: -416263.870882
EM: Round [99] log likelihood: -416263.868305
EM: Round [100] log likelihood: -416263.865814
EM: Round [101] log likelihood: -416263.863403
EM: Round [102] log likelihood: -416263.861071
EM: Round [103] log likelihood: -416263.858814
EM: Round [104] log likelihood: -416263.856630
EM: Round [105] log likelihood: -416263.854515
EM: Round [106] log likelihood: -416263.852468
EM: Round [107] log likelihood: -416263.850485
EM: Round [108] log likelihood: -416263.848565
EM: Round [109] log likelihood: -416263.846704
EM: Round [110] log likelihood: -416263.844902
EM: Round [111] log likelihood: -416263.843156
EM: Round [112] log likelihood: -416263.841463
EM: Round [113] log likelihood: -416263.839823
EM: Round [114] log likelihood: -416263.838233
EM: Round [115] log likelihood: -416263.836691
EM: Round [116] log likelihood: -416263.835196
EM: Round [117] log likelihood: -416263.833747
EM: Round [118] log likelihood: -416263.832341
EM: Round [119] log likelihood: -416263.830977
EM: Round [120] log likelihood: -416263.829654
EM: Round [121] log likelihood: -416263.828371
EM: Round [122] log likelihood: -416263.827125
EM: Round [123] log likelihood: -416263.825917
EM: Round [124] log likelihood: -416263.824744
EM: Round [125] log likelihood: -416263.823606
EM: Round [126] log likelihood: -416263.822501
EM: Round [127] log likelihood: -416263.821429
EM: Round [128] log likelihood: -416263.820387
EM: Round [129] log likelihood: -416263.819376
EM: Round [130] log likelihood: -416263.818395
EM: Round [131] log likelihood: -416263.817441
EM: Round [132] log likelihood: -416263.816515
EM: Round [133] log likelihood: -416263.815616
EM: Round [134] log likelihood: -416263.814742
EM: Round [135] log likelihood: -416263.813894
EM: Round [136] log likelihood: -416263.813069
EM: Round [137] log likelihood: -416263.812268
EM: Round [138] log likelihood: -416263.811490
EM: Round [139] log likelihood: -416263.810734
EM: Round [140] log likelihood: -416263.809999
EM: Round [141] log likelihood: -416263.809284
EM: Round [142] log likelihood: -416263.808590
EM: Round [143] log likelihood: -416263.807915
EM: Round [144] log likelihood: -416263.807259
EM: Round [145] log likelihood: -416263.806621
EM: Round [146] log likelihood: -416263.806001
EM: Round [147] log likelihood: -416263.805398
EM: Round [148] log likelihood: -416263.804812
EM: Round [149] log likelihood: -416263.804242
EM: Round [150] log likelihood: -416263.803687
EM: Round [151] log likelihood: -416263.803148
EM: Round [152] log likelihood: -416263.802624
EM: Round [153] log likelihood: -416263.802114
EM: Round [154] log likelihood: -416263.801617
EM: Round [155] log likelihood: -416263.801135
EM: Round [156] log likelihood: -416263.800665
EM: Round [157] log likelihood: -416263.800208
EM: Round [158] log likelihood: -416263.799764
EM: Round [159] log likelihood: -416263.799331
EM: Round [160] log likelihood: -416263.798910
EM: Round [161] log likelihood: -416263.798500
EM: Round [162] log likelihood: -416263.798102
EM: Round [163] log likelihood: -416263.797713
EM: Round [164] log likelihood: -416263.797336
EM: Round [165] log likelihood: -416263.796968
EM: Round [166] log likelihood: -416263.796610
EM: Round [167] log likelihood: -416263.796261
EM: Round [168] log likelihood: -416263.795922
EM: Round [169] log likelihood: -416263.795591
EM: Round [170] log likelihood: -416263.795270
EM: Round [171] log likelihood: -416263.794956
EM: Round [172] log likelihood: -416263.794651
EM: Round [173] log likelihood: -416263.794354
EM: Round [174] log likelihood: -416263.794065
EM: Round [175] log likelihood: -416263.793783
EM: Round [176] log likelihood: -416263.793508
EM: Round [177] log likelihood: -416263.793240
EM: Round [178] log likelihood: -416263.792980
EM: Round [179] log likelihood: -416263.792726
EM: Round [180] log likelihood: -416263.792478
EM: Round [181] log likelihood: -416263.792237
EM: Round [182] log likelihood: -416263.792002
EM: Round [183] log likelihood: -416263.791773
EM: Round [184] log likelihood: -416263.791549
EM: Round [185] log likelihood: -416263.791332
EM: Round [186] log likelihood: -416263.791120
EM: Round [187] log likelihood: -416263.790913
EM: Round [188] log likelihood: -416263.790711
EM: Round [189] log likelihood: -416263.790515
EM: Round [190] log likelihood: -416263.790323
EM: Round [191] log likelihood: -416263.790136
EM: Round [192] log likelihood: -416263.789954
EM: Round [193] log likelihood: -416263.789776
EM: Round [194] log likelihood: -416263.789603
EM: Round [195] log likelihood: -416263.789433
EM: Round [196] log likelihood: -416263.789268
EM: Round [197] log likelihood: -416263.789107
EM: Round [198] log likelihood: -416263.788950
EM: Round [199] log likelihood: -416263.788797
EM: Round [200] log likelihood: -416263.788647
EM: Round [201] log likelihood: -416263.788502
EM: Round [202] log likelihood: -416263.788359
EM: Round [203] log likelihood: -416263.788220
EM: Round [204] log likelihood: -416263.788084
EM: Round [205] log likelihood: -416263.787952
EM: Round [206] log likelihood: -416263.787823
EM: Round [207] log likelihood: -416263.787696
EM: Round [208] log likelihood: -416263.787573
EM: Round [209] log likelihood: -416263.787453
EM: Round [210] log likelihood: -416263.787335
EM: Round [211] log likelihood: -416263.787220
EM: Round [212] log likelihood: -416263.787108
EM: Round [213] log likelihood: -416263.786998
EM: Round [214] log likelihood: -416263.786891
EM: Round [215] log likelihood: -416263.786787
EM: Round [216] log likelihood: -416263.786685
EM: Round [217] log likelihood: -416263.786585
EM: Stopping iterations at round 217 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -416473.405790
EM: Round [1] log likelihood: -416068.193935
EM: Round [2] log likelihood: -415923.579649
EM: Round [3] log likelihood: -415857.249647
EM: Round [4] log likelihood: -415822.671732
EM: Round [5] log likelihood: -415803.227285
EM: Round [6] log likelihood: -415791.657978
EM: Round [7] log likelihood: -415784.414471
EM: Round [8] log likelihood: -415779.653370
EM: Round [9] log likelihood: -415776.379464
EM: Round [10] log likelihood: -415774.036140
EM: Round [11] log likelihood: -415772.300170
EM: Round [12] log likelihood: -415770.976307
EM: Round [13] log likelihood: -415769.941904
EM: Round [14] log likelihood: -415769.117005
EM: Round [15] log likelihood: -415768.447696
EM: Round [16] log likelihood: -415767.896513
EM: Round [17] log likelihood: -415767.436734
EM: Round [18] log likelihood: -415767.048858
EM: Round [19] log likelihood: -415766.718373
EM: Round [20] log likelihood: -415766.434288
EM: Round [21] log likelihood: -415766.188155
EM: Round [22] log likelihood: -415765.973389
EM: Round [23] log likelihood: -415765.784795
EM: Round [24] log likelihood: -415765.618228
EM: Round [25] log likelihood: -415765.470344
EM: Round [26] log likelihood: -415765.338425
EM: Round [27] log likelihood: -415765.220237
EM: Round [28] log likelihood: -415765.113930
EM: Round [29] log likelihood: -415765.017962
EM: Round [30] log likelihood: -415764.931035
EM: Round [31] log likelihood: -415764.852054
EM: Round [32] log likelihood: -415764.780084
EM: Round [33] log likelihood: -415764.714326
EM: Round [34] log likelihood: -415764.654094
EM: Round [35] log likelihood: -415764.598793
EM: Round [36] log likelihood: -415764.547905
EM: Round [37] log likelihood: -415764.500981
EM: Round [38] log likelihood: -415764.457625
EM: Round [39] log likelihood: -415764.417490
EM: Round [40] log likelihood: -415764.380271
EM: Round [41] log likelihood: -415764.345695
EM: Round [42] log likelihood: -415764.313523
EM: Round [43] log likelihood: -415764.283540
EM: Round [44] log likelihood: -415764.255556
EM: Round [45] log likelihood: -415764.229398
EM: Round [46] log likelihood: -415764.204914
EM: Round [47] log likelihood: -415764.181967
EM: Round [48] log likelihood: -415764.160430
EM: Round [49] log likelihood: -415764.140194
EM: Round [50] log likelihood: -415764.121155
EM: Round [51] log likelihood: -415764.103223
EM: Round [52] log likelihood: -415764.086315
EM: Round [53] log likelihood: -415764.070354
EM: Round [54] log likelihood: -415764.055271
EM: Round [55] log likelihood: -415764.041004
EM: Round [56] log likelihood: -415764.027496
EM: Round [57] log likelihood: -415764.014693
EM: Round [58] log likelihood: -415764.002549
EM: Round [59] log likelihood: -415763.991018
EM: Round [60] log likelihood: -415763.980061
EM: Round [61] log likelihood: -415763.969640
EM: Round [62] log likelihood: -415763.959721
EM: Round [63] log likelihood: -415763.950273
EM: Round [64] log likelihood: -415763.941267
EM: Round [65] log likelihood: -415763.932676
EM: Round [66] log likelihood: -415763.924474
EM: Round [67] log likelihood: -415763.916639
EM: Round [68] log likelihood: -415763.909150
EM: Round [69] log likelihood: -415763.901988
EM: Round [70] log likelihood: -415763.895132
EM: Round [71] log likelihood: -415763.888568
EM: Round [72] log likelihood: -415763.882278
EM: Round [73] log likelihood: -415763.876248
EM: Round [74] log likelihood: -415763.870464
EM: Round [75] log likelihood: -415763.864914
EM: Round [76] log likelihood: -415763.859585
EM: Round [77] log likelihood: -415763.854466
EM: Round [78] log likelihood: -415763.849547
EM: Round [79] log likelihood: -415763.844817
EM: Round [80] log likelihood: -415763.840269
EM: Round [81] log likelihood: -415763.835892
EM: Round [82] log likelihood: -415763.831679
EM: Round [83] log likelihood: -415763.827621
EM: Round [84] log likelihood: -415763.823713
EM: Round [85] log likelihood: -415763.819947
EM: Round [86] log likelihood: -415763.816317
EM: Round [87] log likelihood: -415763.812817
EM: Round [88] log likelihood: -415763.809440
EM: Round [89] log likelihood: -415763.806183
EM: Round [90] log likelihood: -415763.803039
EM: Round [91] log likelihood: -415763.800004
EM: Round [92] log likelihood: -415763.797073
EM: Round [93] log likelihood: -415763.794242
EM: Round [94] log likelihood: -415763.791507
EM: Round [95] log likelihood: -415763.788864
EM: Round [96] log likelihood: -415763.786309
EM: Round [97] log likelihood: -415763.783839
EM: Round [98] log likelihood: -415763.781451
EM: Round [99] log likelihood: -415763.779141
EM: Round [100] log likelihood: -415763.776906
EM: Round [101] log likelihood: -415763.774744
EM: Round [102] log likelihood: -415763.772651
EM: Round [103] log likelihood: -415763.770626
EM: Round [104] log likelihood: -415763.768665
EM: Round [105] log likelihood: -415763.766767
EM: Round [106] log likelihood: -415763.764928
EM: Round [107] log likelihood: -415763.763147
EM: Round [108] log likelihood: -415763.761422
EM: Round [109] log likelihood: -415763.759751
EM: Round [110] log likelihood: -415763.758132
EM: Round [111] log likelihood: -415763.756563
EM: Round [112] log likelihood: -415763.755042
EM: Round [113] log likelihood: -415763.753567
EM: Round [114] log likelihood: -415763.752138
EM: Round [115] log likelihood: -415763.750752
EM: Round [116] log likelihood: -415763.749408
EM: Round [117] log likelihood: -415763.748105
EM: Round [118] log likelihood: -415763.746841
EM: Round [119] log likelihood: -415763.745615
EM: Round [120] log likelihood: -415763.744426
EM: Round [121] log likelihood: -415763.743272
EM: Round [122] log likelihood: -415763.742152
EM: Round [123] log likelihood: -415763.741066
EM: Round [124] log likelihood: -415763.740011
EM: Round [125] log likelihood: -415763.738988
EM: Round [126] log likelihood: -415763.737995
EM: Round [127] log likelihood: -415763.737031
EM: Round [128] log likelihood: -415763.736095
EM: Round [129] log likelihood: -415763.735186
EM: Round [130] log likelihood: -415763.734304
EM: Round [131] log likelihood: -415763.733448
EM: Round [132] log likelihood: -415763.732616
EM: Round [133] log likelihood: -415763.731808
EM: Round [134] log likelihood: -415763.731024
EM: Round [135] log likelihood: -415763.730262
EM: Round [136] log likelihood: -415763.729522
EM: Round [137] log likelihood: -415763.728803
EM: Round [138] log likelihood: -415763.728104
EM: Round [139] log likelihood: -415763.727426
EM: Round [140] log likelihood: -415763.726767
EM: Round [141] log likelihood: -415763.726126
EM: Round [142] log likelihood: -415763.725504
EM: Round [143] log likelihood: -415763.724899
EM: Round [144] log likelihood: -415763.724311
EM: Round [145] log likelihood: -415763.723740
EM: Round [146] log likelihood: -415763.723185
EM: Round [147] log likelihood: -415763.722646
EM: Round [148] log likelihood: -415763.722121
EM: Round [149] log likelihood: -415763.721612
EM: Round [150] log likelihood: -415763.721116
EM: Round [151] log likelihood: -415763.720635
EM: Round [152] log likelihood: -415763.720166
EM: Round [153] log likelihood: -415763.719711
EM: Round [154] log likelihood: -415763.719268
EM: Round [155] log likelihood: -415763.718838
EM: Round [156] log likelihood: -415763.718420
EM: Round [157] log likelihood: -415763.718013
EM: Round [158] log likelihood: -415763.717617
EM: Round [159] log likelihood: -415763.717232
EM: Round [160] log likelihood: -415763.716858
EM: Round [161] log likelihood: -415763.716494
EM: Round [162] log likelihood: -415763.716140
EM: Round [163] log likelihood: -415763.715795
EM: Round [164] log likelihood: -415763.715460
EM: Round [165] log likelihood: -415763.715134
EM: Round [166] log likelihood: -415763.714817
EM: Round [167] log likelihood: -415763.714509
EM: Round [168] log likelihood: -415763.714209
EM: Round [169] log likelihood: -415763.713917
EM: Round [170] log likelihood: -415763.713633
EM: Round [171] log likelihood: -415763.713356
EM: Round [172] log likelihood: -415763.713087
EM: Round [173] log likelihood: -415763.712826
EM: Round [174] log likelihood: -415763.712571
EM: Round [175] log likelihood: -415763.712323
EM: Round [176] log likelihood: -415763.712082
EM: Round [177] log likelihood: -415763.711847
EM: Round [178] log likelihood: -415763.711618
EM: Round [179] log likelihood: -415763.711396
EM: Round [180] log likelihood: -415763.711179
EM: Round [181] log likelihood: -415763.710968
EM: Round [182] log likelihood: -415763.710763
EM: Round [183] log likelihood: -415763.710563
EM: Round [184] log likelihood: -415763.710368
EM: Round [185] log likelihood: -415763.710179
EM: Round [186] log likelihood: -415763.709994
EM: Round [187] log likelihood: -415763.709815
EM: Round [188] log likelihood: -415763.709640
EM: Round [189] log likelihood: -415763.709470
EM: Round [190] log likelihood: -415763.709304
EM: Round [191] log likelihood: -415763.709142
EM: Round [192] log likelihood: -415763.708985
EM: Round [193] log likelihood: -415763.708831
EM: Round [194] log likelihood: -415763.708682
EM: Round [195] log likelihood: -415763.708536
EM: Round [196] log likelihood: -415763.708395
EM: Round [197] log likelihood: -415763.708256
EM: Round [198] log likelihood: -415763.708122
EM: Round [199] log likelihood: -415763.707991
EM: Round [200] log likelihood: -415763.707863
EM: Round [201] log likelihood: -415763.707738
EM: Round [202] log likelihood: -415763.707617
EM: Round [203] log likelihood: -415763.707499
EM: Round [204] log likelihood: -415763.707384
EM: Round [205] log likelihood: -415763.707271
EM: Round [206] log likelihood: -415763.707162
EM: Round [207] log likelihood: -415763.707055
EM: Round [208] log likelihood: -415763.706951
EM: Round [209] log likelihood: -415763.706849
EM: Round [210] log likelihood: -415763.706750
EM: Stopping iterations at round 210 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.47U0qZQTvp/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.47U0qZQTvp/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.47U0qZQTvp/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 190596515 > /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.47U0qZQTvp/ctat_genome_lib_build_dir > /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.47U0qZQTvp/ctat_genome_lib_build_dir --annotate /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.47U0qZQTvp/ctat_genome_lib_build_dir
-done, see /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.47U0qZQTvp/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1684, filtered: 12012)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.47U0qZQTvp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.47U0qZQTvp/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000277146.1]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000287721.1]
WARNING, no entry stored in dbm for [ENSG00000230131.6]
WARNING, no entry stored in dbm for [ENSG00000249001.5]
WARNING, no entry stored in dbm for [ENSG00000278975.1]
WARNING, no entry stored in dbm for [ENSG00000128438.10]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000241735.2]
WARNING, no entry stored in dbm for [ENSG00000271162.1]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000287697.1]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [ENSG00000234769.7]
WARNING, no entry stored in dbm for [ENSG00000100181.22]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000247708.8]
WARNING, no entry stored in dbm for [ENSG00000242123.1]
WARNING, no entry stored in dbm for [ENSG00000213935.3]
WARNING, no entry stored in dbm for [ENSG00000241129.3]
WARNING, no entry stored in dbm for [ENSG00000287516.1]
WARNING, no entry stored in dbm for [ENSG00000227632.2]
WARNING, no entry stored in dbm for [ENSG00000206028.1]
WARNING, no entry stored in dbm for [ENSG00000164621.5]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000233237.8]
WARNING, no entry stored in dbm for [ENSG00000234336.7]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000235768.1]
WARNING, no entry stored in dbm for [ENSG00000231528.3]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000251079.6]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000287392.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000278602.1]
WARNING, no entry stored in dbm for [ENSG00000237222.4]
WARNING, no entry stored in dbm for [ENSG00000225572.1]
WARNING, no entry stored in dbm for [ENSG00000244055.2]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000288075.1]
WARNING, no entry stored in dbm for [ENSG00000233593.10]
WARNING, no entry stored in dbm for [ENSG00000264345.2]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000278611.2]
WARNING, no entry stored in dbm for [ENSG00000250983.1]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000232560.7]
WARNING, no entry stored in dbm for [ENSG00000253661.2]
WARNING, no entry stored in dbm for [ENSG00000253661.2]
WARNING, no entry stored in dbm for [ENSG00000238057.10]
WARNING, no entry stored in dbm for [ENSG00000259001.3]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000233013.10]
WARNING, no entry stored in dbm for [ENSG00000231559.1]
WARNING, no entry stored in dbm for [ENSG00000286846.1]
WARNING, no entry stored in dbm for [ENSG00000261659.2]
WARNING, no entry stored in dbm for [ENSG00000261659.2]
WARNING, no entry stored in dbm for [ENSG00000284661.1]
WARNING, no entry stored in dbm for [ENSG00000281732.1]
WARNING, no entry stored in dbm for [ENSG00000228775.8]
WARNING, no entry stored in dbm for [ENSG00000277053.4]
WARNING, no entry stored in dbm for [ENSG00000146556.14]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000246422.2]
WARNING, no entry stored in dbm for [ENSG00000234730.1]
WARNING, no entry stored in dbm for [ENSG00000176728.10]
WARNING, no entry stored in dbm for [ENSG00000275139.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000226096.1]
WARNING, no entry stored in dbm for [ENSG00000253348.1]
WARNING, no entry stored in dbm for [ENSG00000236106.2]
WARNING, no entry stored in dbm for [ENSG00000235706.8]
WARNING, no entry stored in dbm for [ENSG00000279005.1]
WARNING, no entry stored in dbm for [ENSG00000237380.7]
WARNING, no entry stored in dbm for [ENSG00000230572.5]
WARNING, no entry stored in dbm for [ENSG00000185904.12]
WARNING, no entry stored in dbm for [ENSG00000241764.4]
WARNING, no entry stored in dbm for [ENSG00000182796.14]
WARNING, no entry stored in dbm for [ENSG00000267640.6]
WARNING, no entry stored in dbm for [ENSG00000259867.6]
WARNING, no entry stored in dbm for [ENSG00000248191.1]
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000229167.2]
WARNING, no entry stored in dbm for [ENSG00000203721.7]
WARNING, no entry stored in dbm for [ENSG00000234911.2]
WARNING, no entry stored in dbm for [ENSG00000235833.1]
WARNING, no entry stored in dbm for [ENSG00000249661.1]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000235512.1]
WARNING, no entry stored in dbm for [ENSG00000189212.12]
WARNING, no entry stored in dbm for [ENSG00000247708.8]
WARNING, no entry stored in dbm for [ENSG00000247708.8]
WARNING, no entry stored in dbm for [ENSG00000229533.1]
WARNING, no entry stored in dbm for [ENSG00000215333.3]
WARNING, no entry stored in dbm for [ENSG00000240959.1]
WARNING, no entry stored in dbm for [ENSG00000235374.2]
WARNING, no entry stored in dbm for [ENSG00000225756.1]
WARNING, no entry stored in dbm for [ENSG00000227929.4]
WARNING, no entry stored in dbm for [ENSG00000234898.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000243066.3]
WARNING, no entry stored in dbm for [ENSG00000244692.3]
WARNING, no entry stored in dbm for [ENSG00000242315.3]
WARNING, no entry stored in dbm for [ENSG00000239224.3]
WARNING, no entry stored in dbm for [ENSG00000243426.3]
WARNING, no entry stored in dbm for [ENSG00000242493.3]
WARNING, no entry stored in dbm for [ENSG00000243738.3]
WARNING, no entry stored in dbm for [ENSG00000233399.2]
WARNING, no entry stored in dbm for [ENSG00000239039.1]
WARNING, no entry stored in dbm for [ENSG00000203875.13]
WARNING, no entry stored in dbm for [ENSG00000175061.18]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000279392.1]
WARNING, no entry stored in dbm for [ENSG00000238197.6]
WARNING, no entry stored in dbm for [ENSG00000223949.8]
WARNING, no entry stored in dbm for [ENSG00000279320.1]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000254042.2]
WARNING, no entry stored in dbm for [ENSG00000260727.2]
WARNING, no entry stored in dbm for [ENSG00000285840.2]
WARNING, no entry stored in dbm for [ENSG00000214617.9]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000241693.2]
WARNING, no entry stored in dbm for [ENSG00000240233.3]
WARNING, no entry stored in dbm for [ENSG00000239202.3]
WARNING, no entry stored in dbm for [ENSG00000255182.2]
WARNING, no entry stored in dbm for [ENSG00000233705.7]
WARNING, no entry stored in dbm for [ENSG00000286691.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000242641.6]
WARNING, no entry stored in dbm for [ENSG00000236107.10]
WARNING, no entry stored in dbm for [ENSG00000236107.10]
WARNING, no entry stored in dbm for [ENSG00000240405.7]
WARNING, no entry stored in dbm for [ENSG00000257122.5]
WARNING, no entry stored in dbm for [ENSG00000228929.1]
WARNING, no entry stored in dbm for [ENSG00000242071.3]
WARNING, no entry stored in dbm for [ENSG00000220370.1]
WARNING, no entry stored in dbm for [ENSG00000213641.4]
WARNING, no entry stored in dbm for [ENSG00000213979.3]
WARNING, no entry stored in dbm for [ENSG00000258377.1]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000269609.6]
WARNING, no entry stored in dbm for [ENSG00000239224.3]
WARNING, no entry stored in dbm for [ENSG00000207349.1]
WARNING, no entry stored in dbm for [ENSG00000207205.1]
WARNING, no entry stored in dbm for [ENSG00000213222.3]
WARNING, no entry stored in dbm for [ENSG00000275834.1]
WARNING, no entry stored in dbm for [ENSG00000243562.3]
WARNING, no entry stored in dbm for [ENSG00000239545.3]
WARNING, no entry stored in dbm for [ENSG00000242696.3]
WARNING, no entry stored in dbm for [ENSG00000266875.2]
WARNING, no entry stored in dbm for [ENSG00000229821.1]
WARNING, no entry stored in dbm for [ENSG00000249112.1]
WARNING, no entry stored in dbm for [ENSG00000277449.1]
WARNING, no entry stored in dbm for [ENSG00000251185.1]
WARNING, no entry stored in dbm for [ENSG00000285873.1]
WARNING, no entry stored in dbm for [ENSG00000229419.1]
WARNING, no entry stored in dbm for [ENSG00000235777.1]
WARNING, no entry stored in dbm for [ENSG00000262580.5]
WARNING, no entry stored in dbm for [ENSG00000286100.1]
WARNING, no entry stored in dbm for [ENSG00000248578.1]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000233229.1]
WARNING, no entry stored in dbm for [ENSG00000239636.1]
WARNING, no entry stored in dbm for [ENSG00000237682.2]
WARNING, no entry stored in dbm for [ENSG00000234807.7]
WARNING, no entry stored in dbm for [ENSG00000255874.2]
WARNING, no entry stored in dbm for [ENSG00000203739.4]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000237260.1]
WARNING, no entry stored in dbm for [ENSG00000258591.2]
WARNING, no entry stored in dbm for [ENSG00000263400.8]
WARNING, no entry stored in dbm for [ENSG00000285751.1]
WARNING, no entry stored in dbm for [ENSG00000177788.6]
WARNING, no entry stored in dbm for [ENSG00000256625.1]
WARNING, no entry stored in dbm for [ENSG00000279738.1]
WARNING, no entry stored in dbm for [ENSG00000248522.1]
WARNING, no entry stored in dbm for [ENSG00000270474.2]
WARNING, no entry stored in dbm for [ENSG00000272817.1]
WARNING, no entry stored in dbm for [ENSG00000263165.1]
WARNING, no entry stored in dbm for [ENSG00000242686.4]
WARNING, no entry stored in dbm for [ENSG00000286027.1]
WARNING, no entry stored in dbm for [ENSG00000284692.2]
WARNING, no entry stored in dbm for [ENSG00000268949.1]
WARNING, no entry stored in dbm for [ENSG00000250934.2]
WARNING, no entry stored in dbm for [ENSG00000255390.1]
WARNING, no entry stored in dbm for [ENSG00000251504.1]
WARNING, no entry stored in dbm for [ENSG00000231070.1]
WARNING, no entry stored in dbm for [ENSG00000249419.1]
WARNING, no entry stored in dbm for [ENSG00000106133.18]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000257838.5]
WARNING, no entry stored in dbm for [ENSG00000262248.1]
WARNING, no entry stored in dbm for [ENSG00000286654.1]
WARNING, no entry stored in dbm for [ENSG00000266053.2]
WARNING, no entry stored in dbm for [ENSG00000228623.6]
WARNING, no entry stored in dbm for [ENSG00000206337.12]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000256663.1]
WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000279419.1]
WARNING, no entry stored in dbm for [ENSG00000235649.2]
WARNING, no entry stored in dbm for [ENSG00000288107.1]
WARNING, no entry stored in dbm for [ENSG00000203650.9]
WARNING, no entry stored in dbm for [ENSG00000251141.6]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000228340.6]
WARNING, no entry stored in dbm for [ENSG00000224141.6]
WARNING, no entry stored in dbm for [ENSG00000272690.6]
WARNING, no entry stored in dbm for [ENSG00000196312.15]
WARNING, no entry stored in dbm for [ENSG00000205611.5]
WARNING, no entry stored in dbm for [ENSG00000272701.3]
WARNING, no entry stored in dbm for [ENSG00000183022.5]
WARNING, no entry stored in dbm for [ENSG00000250200.1]
WARNING, no entry stored in dbm for [ENSG00000251003.9]
WARNING, no entry stored in dbm for [ENSG00000231689.2]
WARNING, no entry stored in dbm for [ENSG00000250983.1]
WARNING, no entry stored in dbm for [ENSG00000143429.10]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000125122.16]
WARNING, no entry stored in dbm for [ENSG00000217702.3]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000285210.1]
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000235645.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000241288.8]
WARNING, no entry stored in dbm for [ENSG00000226741.2]
WARNING, no entry stored in dbm for [ENSG00000259032.2]
WARNING, no entry stored in dbm for [ENSG00000256115.6]
WARNING, no entry stored in dbm for [ENSG00000258819.2]
WARNING, no entry stored in dbm for [ENSG00000238042.5]
WARNING, no entry stored in dbm for [ENSG00000238042.5]
WARNING, no entry stored in dbm for [ENSG00000267719.1]
WARNING, no entry stored in dbm for [ENSG00000254101.7]
WARNING, no entry stored in dbm for [ENSG00000279082.4]
WARNING, no entry stored in dbm for [ENSG00000224017.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000230426.4]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000233117.4]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000228221.6]
WARNING, no entry stored in dbm for [ENSG00000281392.2]
WARNING, no entry stored in dbm for [ENSG00000235660.2]
WARNING, no entry stored in dbm for [ENSG00000287765.1]
WARNING, no entry stored in dbm for [ENSG00000226034.2]
WARNING, no entry stored in dbm for [ENSG00000280007.1]
WARNING, no entry stored in dbm for [ENSG00000257135.7]
WARNING, no entry stored in dbm for [ENSG00000228054.2]
WARNING, no entry stored in dbm for [ENSG00000229638.1]
WARNING, no entry stored in dbm for [ENSG00000197332.9]
WARNING, no entry stored in dbm for [ENSG00000224616.3]
WARNING, no entry stored in dbm for [ENSG00000222328.1]
WARNING, no entry stored in dbm for [ENSG00000274585.1]
WARNING, no entry stored in dbm for [ENSG00000228259.3]
WARNING, no entry stored in dbm for [ENSG00000214617.9]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000236679.2]
WARNING, no entry stored in dbm for [ENSG00000237424.1]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000236963.7]
WARNING, no entry stored in dbm for [ENSG00000233503.1]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000243188.1]
WARNING, no entry stored in dbm for [ENSG00000205412.5]
WARNING, no entry stored in dbm for [ENSG00000231471.1]
WARNING, no entry stored in dbm for [ENSG00000261620.1]
WARNING, no entry stored in dbm for [ENSG00000256557.1]
WARNING, no entry stored in dbm for [ENSG00000253774.1]
WARNING, no entry stored in dbm for [ENSG00000228078.1]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000230267.7]
WARNING, no entry stored in dbm for [ENSG00000002079.14]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000287262.1]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000234945.8]
WARNING, no entry stored in dbm for [ENSG00000255199.2]
WARNING, no entry stored in dbm for [ENSG00000233910.1]
WARNING, no entry stored in dbm for [ENSG00000249007.1]
WARNING, no entry stored in dbm for [ENSG00000249882.2]
WARNING, no entry stored in dbm for [ENSG00000188388.10]
WARNING, no entry stored in dbm for [ENSG00000226808.3]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000232827.3]
WARNING, no entry stored in dbm for [ENSG00000279973.2]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000248103.1]
WARNING, no entry stored in dbm for [ENSG00000274727.1]
WARNING, no entry stored in dbm for [ENSG00000205930.10]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000266976.3]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000244383.2]
WARNING, no entry stored in dbm for [ENSG00000257815.7]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000246339.6]
WARNING, no entry stored in dbm for [ENSG00000258454.1]
WARNING, no entry stored in dbm for [ENSG00000264546.1]
WARNING, no entry stored in dbm for [ENSG00000279459.1]
WARNING, no entry stored in dbm for [ENSG00000185684.15]
WARNING, no entry stored in dbm for [ENSG00000226688.7]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000234152.1]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000250015.1]
WARNING, no entry stored in dbm for [ENSG00000248202.2]
WARNING, no entry stored in dbm for [ENSG00000287392.1]
WARNING, no entry stored in dbm for [ENSG00000229140.11]
WARNING, no entry stored in dbm for [ENSG00000176593.8]
WARNING, no entry stored in dbm for [ENSG00000176593.8]
WARNING, no entry stored in dbm for [ENSG00000186704.9]
WARNING, no entry stored in dbm for [ENSG00000253915.1]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000231441.2]
WARNING, no entry stored in dbm for [ENSG00000184029.9]
WARNING, no entry stored in dbm for [ENSG00000254838.5]
WARNING, no entry stored in dbm for [ENSG00000248539.1]
WARNING, no entry stored in dbm for [ENSG00000230487.8]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000228031.4]
WARNING, no entry stored in dbm for [ENSG00000226609.2]
WARNING, no entry stored in dbm for [ENSG00000278903.3]
WARNING, no entry stored in dbm for [ENSG00000178803.12]
WARNING, no entry stored in dbm for [ENSG00000242193.11]
WARNING, no entry stored in dbm for [ENSG00000080947.15]
WARNING, no entry stored in dbm for [ENSG00000225769.1]
WARNING, no entry stored in dbm for [ENSG00000283537.2]
WARNING, no entry stored in dbm for [ENSG00000235721.1]
WARNING, no entry stored in dbm for [ENSG00000273118.1]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000286551.1]
WARNING, no entry stored in dbm for [ENSG00000279607.1]
WARNING, no entry stored in dbm for [ENSG00000288253.1]
WARNING, no entry stored in dbm for [ENSG00000267383.7]
WARNING, no entry stored in dbm for [ENSG00000260896.6]
WARNING, no entry stored in dbm for [ENSG00000226360.5]
WARNING, no entry stored in dbm for [ENSG00000270938.1]
WARNING, no entry stored in dbm for [ENSG00000247572.8]
WARNING, no entry stored in dbm for [ENSG00000247572.8]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000223960.7]
WARNING, no entry stored in dbm for [ENSG00000230551.4]
WARNING, no entry stored in dbm for [ENSG00000230113.1]
WARNING, no entry stored in dbm for [ENSG00000154608.14]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000249035.7]
WARNING, no entry stored in dbm for [ENSG00000270479.1]
WARNING, no entry stored in dbm for [ENSG00000205763.13]
WARNING, no entry stored in dbm for [ENSG00000266194.1]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000283907.1]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000249669.10]
WARNING, no entry stored in dbm for [ENSG00000260942.1]
WARNING, no entry stored in dbm for [ENSG00000228775.8]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000204055.5]
WARNING, no entry stored in dbm for [ENSG00000224750.6]
WARNING, no entry stored in dbm for [ENSG00000273143.2]
WARNING, no entry stored in dbm for [ENSG00000247092.7]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000251079.6]
WARNING, no entry stored in dbm for [ENSG00000251079.6]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000237949.2]
WARNING, no entry stored in dbm for [ENSG00000261656.6]
WARNING, no entry stored in dbm for [ENSG00000283117.1]
WARNING, no entry stored in dbm for [ENSG00000279022.1]
WARNING, no entry stored in dbm for [ENSG00000254560.6]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000240489.1]
WARNING, no entry stored in dbm for [ENSG00000278768.2]
WARNING, no entry stored in dbm for [ENSG00000255750.6]
WARNING, no entry stored in dbm for [ENSG00000268858.2]
WARNING, no entry stored in dbm for [ENSG00000287934.1]
WARNING, no entry stored in dbm for [ENSG00000245060.8]
WARNING, no entry stored in dbm for [ENSG00000267128.2]
WARNING, no entry stored in dbm for [ENSG00000275613.2]
WARNING, no entry stored in dbm for [ENSG00000272595.2]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000229334.1]
WARNING, no entry stored in dbm for [ENSG00000277693.2]
WARNING, no entry stored in dbm for [ENSG00000277693.2]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000254307.2]
WARNING, no entry stored in dbm for [ENSG00000279246.1]
WARNING, no entry stored in dbm for [ENSG00000255449.1]
WARNING, no entry stored in dbm for [ENSG00000266373.1]
WARNING, no entry stored in dbm for [ENSG00000223563.1]
WARNING, no entry stored in dbm for [ENSG00000231355.1]
WARNING, no entry stored in dbm for [ENSG00000229956.11]
WARNING, no entry stored in dbm for [ENSG00000277878.1]
WARNING, no entry stored in dbm for [ENSG00000280383.1]
WARNING, no entry stored in dbm for [ENSG00000235085.3]
WARNING, no entry stored in dbm for [ENSG00000286724.1]
WARNING, no entry stored in dbm for [ENSG00000270094.1]
WARNING, no entry stored in dbm for [ENSG00000230021.10]
WARNING, no entry stored in dbm for [ENSG00000239906.1]
WARNING, no entry stored in dbm for [ENSG00000233926.1]
WARNING, no entry stored in dbm for [ENSG00000284640.1]
WARNING, no entry stored in dbm for [ENSG00000287598.1]
WARNING, no entry stored in dbm for [ENSG00000237174.7]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000287887.1]
WARNING, no entry stored in dbm for [ENSG00000279459.1]
WARNING, no entry stored in dbm for [ENSG00000250734.2]
WARNING, no entry stored in dbm for [ENSG00000285280.2]
WARNING, no entry stored in dbm for [ENSG00000235020.5]
WARNING, no entry stored in dbm for [ENSG00000217801.10]
WARNING, no entry stored in dbm for [ENSG00000226465.3]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000270103.3]
WARNING, no entry stored in dbm for [ENSG00000237445.2]
WARNING, no entry stored in dbm for [ENSG00000236523.2]
WARNING, no entry stored in dbm for [ENSG00000237461.2]
WARNING, no entry stored in dbm for [ENSG00000228792.3]
WARNING, no entry stored in dbm for [ENSG00000246203.2]
WARNING, no entry stored in dbm for [ENSG00000233668.1]
WARNING, no entry stored in dbm for [ENSG00000285796.1]
WARNING, no entry stored in dbm for [ENSG00000204055.5]
WARNING, no entry stored in dbm for [ENSG00000234996.4]
WARNING, no entry stored in dbm for [ENSG00000239216.1]
WARNING, no entry stored in dbm for [ENSG00000259049.1]
WARNING, no entry stored in dbm for [ENSG00000234426.3]
WARNING, no entry stored in dbm for [ENSG00000233379.2]
WARNING, no entry stored in dbm for [ENSG00000237596.7]
WARNING, no entry stored in dbm for [ENSG00000283773.1]
WARNING, no entry stored in dbm for [ENSG00000287449.1]
WARNING, no entry stored in dbm for [ENSG00000258620.2]
WARNING, no entry stored in dbm for [ENSG00000272892.1]
WARNING, no entry stored in dbm for [ENSG00000270231.4]
WARNING, no entry stored in dbm for [ENSG00000248975.2]
WARNING, no entry stored in dbm for [ENSG00000260285.1]
WARNING, no entry stored in dbm for [ENSG00000227220.1]
WARNING, no entry stored in dbm for [ENSG00000276805.2]
WARNING, no entry stored in dbm for [ENSG00000240096.1]
WARNING, no entry stored in dbm for [ENSG00000218754.4]
WARNING, no entry stored in dbm for [ENSG00000283405.2]
WARNING, no entry stored in dbm for [ENSG00000233558.1]
WARNING, no entry stored in dbm for [ENSG00000248527.1]
WARNING, no entry stored in dbm for [ENSG00000269910.1]
WARNING, no entry stored in dbm for [ENSG00000285646.2]
WARNING, no entry stored in dbm for [ENSG00000270330.1]
WARNING, no entry stored in dbm for [ENSG00000275834.1]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000260316.2]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000268833.1]
WARNING, no entry stored in dbm for [ENSG00000200156.1]
WARNING, no entry stored in dbm for [ENSG00000199568.1]
WARNING, no entry stored in dbm for [ENSG00000258730.1]
WARNING, no entry stored in dbm for [ENSG00000248727.6]
WARNING, no entry stored in dbm for [ENSG00000227417.3]
WARNING, no entry stored in dbm for [ENSG00000243505.3]
WARNING, no entry stored in dbm for [ENSG00000276216.1]
WARNING, no entry stored in dbm for [ENSG00000277009.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000234283.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000275121.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000186704.9]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000215154.6]
WARNING, no entry stored in dbm for [ENSG00000261760.8]
WARNING, no entry stored in dbm for [ENSG00000246596.7]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000214999.3]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000250195.1]
WARNING, no entry stored in dbm for [ENSG00000287662.1]
WARNING, no entry stored in dbm for [ENSG00000250284.3]
WARNING, no entry stored in dbm for [ENSG00000226439.3]
WARNING, no entry stored in dbm for [ENSG00000260037.5]
WARNING, no entry stored in dbm for [ENSG00000253796.2]
WARNING, no entry stored in dbm for [ENSG00000253154.2]
WARNING, no entry stored in dbm for [ENSG00000282375.1]
WARNING, no entry stored in dbm for [ENSG00000286436.1]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000286251.2]
WARNING, no entry stored in dbm for [ENSG00000248912.1]
WARNING, no entry stored in dbm for [ENSG00000251378.1]
WARNING, no entry stored in dbm for [ENSG00000286477.1]
WARNING, no entry stored in dbm for [ENSG00000249001.5]
WARNING, no entry stored in dbm for [ENSG00000249741.2]
WARNING, no entry stored in dbm for [ENSG00000284968.1]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000225209.2]
WARNING, no entry stored in dbm for [ENSG00000247728.2]
WARNING, no entry stored in dbm for [ENSG00000254316.1]
WARNING, no entry stored in dbm for [ENSG00000253676.1]
WARNING, no entry stored in dbm for [ENSG00000255583.2]
WARNING, no entry stored in dbm for [ENSG00000287022.1]
WARNING, no entry stored in dbm for [ENSG00000284707.2]
WARNING, no entry stored in dbm for [ENSG00000232633.4]
WARNING, no entry stored in dbm for [ENSG00000259561.1]
WARNING, no entry stored in dbm for [ENSG00000241219.1]
WARNING, no entry stored in dbm for [ENSG00000283390.1]
WARNING, no entry stored in dbm for [ENSG00000259299.1]
WARNING, no entry stored in dbm for [ENSG00000286856.1]
WARNING, no entry stored in dbm for [ENSG00000260035.1]
WARNING, no entry stored in dbm for [ENSG00000259932.1]
WARNING, no entry stored in dbm for [ENSG00000286090.1]
WARNING, no entry stored in dbm for [ENSG00000257809.1]
WARNING, no entry stored in dbm for [ENSG00000286698.1]
WARNING, no entry stored in dbm for [ENSG00000251066.1]
WARNING, no entry stored in dbm for [ENSG00000263766.5]
WARNING, no entry stored in dbm for [ENSG00000214883.4]
WARNING, no entry stored in dbm for [ENSG00000287555.1]
WARNING, no entry stored in dbm for [ENSG00000268093.1]
WARNING, no entry stored in dbm for [ENSG00000267169.2]
WARNING, no entry stored in dbm for [ENSG00000230082.1]
WARNING, no entry stored in dbm for [ENSG00000259407.1]
WARNING, no entry stored in dbm for [ENSG00000273007.2]
WARNING, no entry stored in dbm for [ENSG00000242858.1]
WARNING, no entry stored in dbm for [ENSG00000229852.4]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000233862.7]
WARNING, no entry stored in dbm for [ENSG00000218175.2]
WARNING, no entry stored in dbm for [ENSG00000240519.1]
WARNING, no entry stored in dbm for [ENSG00000267682.1]
WARNING, no entry stored in dbm for [ENSG00000235725.1]
WARNING, no entry stored in dbm for [ENSG00000277146.1]
WARNING, no entry stored in dbm for [ENSG00000213293.4]
WARNING, no entry stored in dbm for [ENSG00000242814.2]
WARNING, no entry stored in dbm for [ENSG00000286207.1]
WARNING, no entry stored in dbm for [ENSG00000228007.1]
WARNING, no entry stored in dbm for [ENSG00000261400.1]
WARNING, no entry stored in dbm for [ENSG00000272180.1]
WARNING, no entry stored in dbm for [ENSG00000279598.1]
WARNING, no entry stored in dbm for [ENSG00000146556.14]
WARNING, no entry stored in dbm for [ENSG00000229689.3]
WARNING, no entry stored in dbm for [ENSG00000168992.4]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000251680.6]
WARNING, no entry stored in dbm for [ENSG00000197332.9]
WARNING, no entry stored in dbm for [ENSG00000248103.1]
WARNING, no entry stored in dbm for [ENSG00000232220.2]
WARNING, no entry stored in dbm for [ENSG00000283041.1]
WARNING, no entry stored in dbm for [ENSG00000278975.1]
WARNING, no entry stored in dbm for [ENSG00000263345.1]
WARNING, no entry stored in dbm for [ENSG00000267191.2]
WARNING, no entry stored in dbm for [ENSG00000269968.1]
WARNING, no entry stored in dbm for [ENSG00000269968.1]
WARNING, no entry stored in dbm for [ENSG00000263159.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000268983.1]
WARNING, no entry stored in dbm for [ENSG00000261535.1]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000280054.1]
WARNING, no entry stored in dbm for [ENSG00000283366.2]
WARNING, no entry stored in dbm for [ENSG00000259838.1]
WARNING, no entry stored in dbm for [ENSG00000242908.6]
* STAR-Fusion complete. See output: /tmp/nxf.47U0qZQTvp/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)