[W::hts_idx_load3] The index file is older than the data file: 1173_9C_T1_RNA_SLD_01_A23T55JLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	242378439
Known Splicing Events:	239243602
Partial Novel Splicing Events:	1368669
Novel Splicing Events:	1699052
Filtered Splicing Events:	67116

Total splicing  Junctions:	487450
Known Splicing Junctions:	272281
Partial Novel Splicing Junctions:	141023
Novel Splicing Junctions:	74146

===================================================================
Create BED file ...
Create Interact file ...