Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ed/828ef0c9905e71f3b2623188782ce3/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ed/828ef0c9905e71f3b2623188782ce3/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/95/4b135024d45d0ac9f1ff16ee831e71/1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/29/8a94d2095fb88e7dbdc9ec62437b03/1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/29/8a94d2095fb88e7dbdc9ec62437b03/1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1_1.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.KzcTt0xLC4/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary
-sample contains 27607396 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir  -J /tmp/nxf.KzcTt0xLC4/1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  -O /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.KzcTt0xLC4/1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[3280000], rate=164548.49/min -building interval tree based on /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[2710000], rate=1-building interval tree based on /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=120000.00/min 
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[2640000], rate=94567.16/min 
[26500-building interval tree based on /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=75000.00/min 
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[1990000], rate=85837.53/min 
[2000000], rate=85959.89/min 
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[2970000], rate=102354.97/min 
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[3000000], rate=102739.73/min 
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[3060000], rate=104022.66/min 
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[3080000], rate=104584.04/min 
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[3100000], rate=105144.15/min 
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[3140000], rate=106140.85/min 
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[3300000], rate=106911.45/min 
[3310000], rate=106946.69/min 
[3320000], rate=106866.95/min 
[3330000], rate=106844.92/min 00], rate=94530.32/min 
[2660000], rate=94437.87/min 
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[3280000], rate=92177.99/min 
[3290000], rate=92113.86/min 
[3300000], rate=91964.70/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
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 9705882.35 reads per min processed...  
 9600000.00 reads per min processed...  
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 9666666.67 reads per min processed...  
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 9807692.31 reads per min processed...  
 9735849.06 reads per min processed...  
 9666666.67 reads per min processed...  
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 9818181.82 reads per min processed...  
 9927272.73 reads per min processed...  
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 9964285.71 reads per min processed...  
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 10000000.00 reads per min processed...  
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done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.KzcTt0xLC4/1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -628804.556113
EM: Round [1] log likelihood: -627700.671941
EM: Round [2] log likelihood: -627340.614617
EM: Round [3] log likelihood: -627181.770280
EM: Round [4] log likelihood: -627100.177131
EM: Round [5] log likelihood: -627054.246270
EM: Round [6] log likelihood: -627026.588914
EM: Round [7] log likelihood: -627008.952966
EM: Round [8] log likelihood: -626997.120178
EM: Round [9] log likelihood: -626988.818114
EM: Round [10] log likelihood: -626982.765247
EM: Round [11] log likelihood: -626978.206710
EM: Round [12] log likelihood: -626974.678987
EM: Round [13] log likelihood: -626971.886165
EM: Round [14] log likelihood: -626969.632466
EM: Round [15] log likelihood: -626967.784136
EM: Round [16] log likelihood: -626966.247156
EM: Round [17] log likelihood: -626964.953760
EM: Round [18] log likelihood: -626963.854017
EM: Round [19] log likelihood: -626962.910421
EM: Round [20] log likelihood: -626962.094309
EM: Round [21] log likelihood: -626961.383439
EM: Round [22] log likelihood: -626960.760318
EM: Round [23] log likelihood: -626960.211011
EM: Round [24] log likelihood: -626959.724298
EM: Round [25] log likelihood: -626959.291049
EM: Round [26] log likelihood: -626958.903764
EM: Round [27] log likelihood: -626958.556235
EM: Round [28] log likelihood: -626958.243276
EM: Round [29] log likelihood: -626957.960528
EM: Round [30] log likelihood: -626957.704304
EM: Round [31] log likelihood: -626957.471462
EM: Round [32] log likelihood: -626957.259314
EM: Round [33] log likelihood: -626957.065546
EM: Round [34] log likelihood: -626956.888156
EM: Round [35] log likelihood: -626956.725407
EM: Round [36] log likelihood: -626956.575784
EM: Round [37] log likelihood: -626956.437961
EM: Round [38] log likelihood: -626956.310771
EM: Round [39] log likelihood: -626956.193189
EM: Round [40] log likelihood: -626956.084306
EM: Round [41] log likelihood: -626955.983318
EM: Round [42] log likelihood: -626955.889509
EM: Round [43] log likelihood: -626955.802240
EM: Round [44] log likelihood: -626955.720942
EM: Round [45] log likelihood: -626955.645104
EM: Round [46] log likelihood: -626955.574267
EM: Round [47] log likelihood: -626955.508021
EM: Round [48] log likelihood: -626955.445992
EM: Round [49] log likelihood: -626955.387846
EM: Round [50] log likelihood: -626955.333278
EM: Round [51] log likelihood: -626955.282014
EM: Round [52] log likelihood: -626955.233804
EM: Round [53] log likelihood: -626955.188421
EM: Round [54] log likelihood: -626955.145657
EM: Round [55] log likelihood: -626955.105325
EM: Round [56] log likelihood: -626955.067251
EM: Round [57] log likelihood: -626955.031278
EM: Round [58] log likelihood: -626954.997262
EM: Round [59] log likelihood: -626954.965069
EM: Round [60] log likelihood: -626954.934579
EM: Round [61] log likelihood: -626954.905679
EM: Round [62] log likelihood: -626954.878267
EM: Round [63] log likelihood: -626954.852246
EM: Round [64] log likelihood: -626954.827530
EM: Round [65] log likelihood: -626954.804037
EM: Round [66] log likelihood: -626954.781693
EM: Round [67] log likelihood: -626954.760427
EM: Round [68] log likelihood: -626954.740176
EM: Round [69] log likelihood: -626954.720879
EM: Round [70] log likelihood: -626954.702482
EM: Round [71] log likelihood: -626954.684932
EM: Round [72] log likelihood: -626954.668182
EM: Round [73] log likelihood: -626954.652187
EM: Round [74] log likelihood: -626954.636904
EM: Round [75] log likelihood: -626954.622296
EM: Round [76] log likelihood: -626954.608325
EM: Round [77] log likelihood: -626954.594957
EM: Round [78] log likelihood: -626954.582162
EM: Round [79] log likelihood: -626954.569908
EM: Round [80] log likelihood: -626954.558168
EM: Round [81] log likelihood: -626954.546916
EM: Round [82] log likelihood: -626954.536127
EM: Round [83] log likelihood: -626954.525778
EM: Round [84] log likelihood: -626954.515848
EM: Round [85] log likelihood: -626954.506315
EM: Round [86] log likelihood: -626954.497160
EM: Round [87] log likelihood: -626954.488366
EM: Round [88] log likelihood: -626954.479915
EM: Round [89] log likelihood: -626954.471791
EM: Round [90] log likelihood: -626954.463979
EM: Round [91] log likelihood: -626954.456464
EM: Round [92] log likelihood: -626954.449234
EM: Round [93] log likelihood: -626954.442274
EM: Round [94] log likelihood: -626954.435573
EM: Round [95] log likelihood: -626954.429120
EM: Round [96] log likelihood: -626954.422902
EM: Round [97] log likelihood: -626954.416911
EM: Round [98] log likelihood: -626954.411137
EM: Round [99] log likelihood: -626954.405569
EM: Round [100] log likelihood: -626954.400199
EM: Round [101] log likelihood: -626954.395019
EM: Round [102] log likelihood: -626954.390021
EM: Round [103] log likelihood: -626954.385197
EM: Round [104] log likelihood: -626954.380540
EM: Round [105] log likelihood: -626954.376044
EM: Round [106] log likelihood: -626954.371700
EM: Round [107] log likelihood: -626954.367505
EM: Round [108] log likelihood: -626954.363450
EM: Round [109] log likelihood: -626954.359532
EM: Round [110] log likelihood: -626954.355744
EM: Round [111] log likelihood: -626954.352081
EM: Round [112] log likelihood: -626954.348539
EM: Round [113] log likelihood: -626954.345112
EM: Round [114] log likelihood: -626954.341797
EM: Round [115] log likelihood: -626954.338588
EM: Round [116] log likelihood: -626954.335483
EM: Round [117] log likelihood: -626954.332477
EM: Round [118] log likelihood: -626954.329566
EM: Round [119] log likelihood: -626954.326746
EM: Round [120] log likelihood: -626954.324015
EM: Round [121] log likelihood: -626954.321370
EM: Round [122] log likelihood: -626954.318806
EM: Round [123] log likelihood: -626954.316321
EM: Round [124] log likelihood: -626954.313912
EM: Round [125] log likelihood: -626954.311576
EM: Round [126] log likelihood: -626954.309311
EM: Round [127] log likelihood: -626954.307115
EM: Round [128] log likelihood: -626954.304984
EM: Round [129] log likelihood: -626954.302916
EM: Round [130] log likelihood: -626954.300910
EM: Round [131] log likelihood: -626954.298963
EM: Round [132] log likelihood: -626954.297073
EM: Round [133] log likelihood: -626954.295238
EM: Round [134] log likelihood: -626954.293456
EM: Round [135] log likelihood: -626954.291725
EM: Round [136] log likelihood: -626954.290044
EM: Round [137] log likelihood: -626954.288410
EM: Round [138] log likelihood: -626954.286823
EM: Round [139] log likelihood: -626954.285281
EM: Round [140] log likelihood: -626954.283782
EM: Round [141] log likelihood: -626954.282324
EM: Round [142] log likelihood: -626954.280908
EM: Round [143] log likelihood: -626954.279530
EM: Round [144] log likelihood: -626954.278189
EM: Round [145] log likelihood: -626954.276886
EM: Round [146] log likelihood: -626954.275618
EM: Round [147] log likelihood: -626954.274383
EM: Round [148] log likelihood: -626954.273182
EM: Round [149] log likelihood: -626954.272013
EM: Round [150] log likelihood: -626954.270875
EM: Round [151] log likelihood: -626954.269768
EM: Round [152] log likelihood: -626954.268689
EM: Round [153] log likelihood: -626954.267638
EM: Round [154] log likelihood: -626954.266614
EM: Round [155] log likelihood: -626954.265617
EM: Round [156] log likelihood: -626954.264646
EM: Round [157] log likelihood: -626954.263699
EM: Round [158] log likelihood: -626954.262776
EM: Round [159] log likelihood: -626954.261877
EM: Round [160] log likelihood: -626954.261000
EM: Round [161] log likelihood: -626954.260145
EM: Round [162] log likelihood: -626954.259311
EM: Round [163] log likelihood: -626954.258498
EM: Round [164] log likelihood: -626954.257704
EM: Round [165] log likelihood: -626954.256930
EM: Round [166] log likelihood: -626954.256175
EM: Round [167] log likelihood: -626954.255438
EM: Round [168] log likelihood: -626954.254719
EM: Round [169] log likelihood: -626954.254016
EM: Round [170] log likelihood: -626954.253331
EM: Round [171] log likelihood: -626954.252661
EM: Round [172] log likelihood: -626954.252007
EM: Round [173] log likelihood: -626954.251369
EM: Round [174] log likelihood: -626954.250745
EM: Round [175] log likelihood: -626954.250135
EM: Round [176] log likelihood: -626954.249540
EM: Round [177] log likelihood: -626954.248958
EM: Round [178] log likelihood: -626954.248389
EM: Round [179] log likelihood: -626954.247833
EM: Round [180] log likelihood: -626954.247289
EM: Round [181] log likelihood: -626954.246757
EM: Round [182] log likelihood: -626954.246238
EM: Round [183] log likelihood: -626954.245729
EM: Round [184] log likelihood: -626954.245231
EM: Round [185] log likelihood: -626954.244745
EM: Round [186] log likelihood: -626954.244268
EM: Round [187] log likelihood: -626954.243802
EM: Round [188] log likelihood: -626954.243346
EM: Round [189] log likelihood: -626954.242900
EM: Round [190] log likelihood: -626954.242463
EM: Round [191] log likelihood: -626954.242034
EM: Round [192] log likelihood: -626954.241615
EM: Round [193] log likelihood: -626954.241205
EM: Round [194] log likelihood: -626954.240802
EM: Round [195] log likelihood: -626954.240408
EM: Round [196] log likelihood: -626954.240022
EM: Round [197] log likelihood: -626954.239644
EM: Round [198] log likelihood: -626954.239273
EM: Round [199] log likelihood: -626954.238910
EM: Round [200] log likelihood: -626954.238554
EM: Round [201] log likelihood: -626954.238204
EM: Round [202] log likelihood: -626954.237862
EM: Round [203] log likelihood: -626954.237526
EM: Round [204] log likelihood: -626954.237196
EM: Round [205] log likelihood: -626954.236873
EM: Round [206] log likelihood: -626954.236556
EM: Round [207] log likelihood: -626954.236245
EM: Round [208] log likelihood: -626954.235940
EM: Round [209] log likelihood: -626954.235640
EM: Round [210] log likelihood: -626954.235346
EM: Round [211] log likelihood: -626954.235057
EM: Round [212] log likelihood: -626954.234774
EM: Round [213] log likelihood: -626954.234495
EM: Round [214] log likelihood: -626954.234222
EM: Round [215] log likelihood: -626954.233954
EM: Round [216] log likelihood: -626954.233690
EM: Round [217] log likelihood: -626954.233431
EM: Round [218] log likelihood: -626954.233176
EM: Round [219] log likelihood: -626954.232926
EM: Round [220] log likelihood: -626954.232680
EM: Round [221] log likelihood: -626954.232439
EM: Round [222] log likelihood: -626954.232201
EM: Round [223] log likelihood: -626954.231968
EM: Round [224] log likelihood: -626954.231738
EM: Round [225] log likelihood: -626954.231512
EM: Round [226] log likelihood: -626954.231290
EM: Round [227] log likelihood: -626954.231072
EM: Round [228] log likelihood: -626954.230857
EM: Round [229] log likelihood: -626954.230646
EM: Round [230] log likelihood: -626954.230438
EM: Round [231] log likelihood: -626954.230234
EM: Round [232] log likelihood: -626954.230033
EM: Round [233] log likelihood: -626954.229835
EM: Round [234] log likelihood: -626954.229640
EM: Round [235] log likelihood: -626954.229448
EM: Round [236] log likelihood: -626954.229259
EM: Round [237] log likelihood: -626954.229073
EM: Round [238] log likelihood: -626954.228890
EM: Round [239] log likelihood: -626954.228709
EM: Round [240] log likelihood: -626954.228532
EM: Round [241] log likelihood: -626954.228357
EM: Round [242] log likelihood: -626954.228184
EM: Round [243] log likelihood: -626954.228015
EM: Round [244] log likelihood: -626954.227847
EM: Round [245] log likelihood: -626954.227683
EM: Round [246] log likelihood: -626954.227520
EM: Round [247] log likelihood: -626954.227360
EM: Round [248] log likelihood: -626954.227202
EM: Round [249] log likelihood: -626954.227047
EM: Round [250] log likelihood: -626954.226894
EM: Round [251] log likelihood: -626954.226742
EM: Round [252] log likelihood: -626954.226593
EM: Round [253] log likelihood: -626954.226447
EM: Round [254] log likelihood: -626954.226302
EM: Round [255] log likelihood: -626954.226159
EM: Round [256] log likelihood: -626954.226018
EM: Round [257] log likelihood: -626954.225879
EM: Round [258] log likelihood: -626954.225742
EM: Round [259] log likelihood: -626954.225606
EM: Round [260] log likelihood: -626954.225473
EM: Round [261] log likelihood: -626954.225341
EM: Round [262] log likelihood: -626954.225211
EM: Round [263] log likelihood: -626954.225083
EM: Round [264] log likelihood: -626954.224956
EM: Round [265] log likelihood: -626954.224832
EM: Round [266] log likelihood: -626954.224708
EM: Round [267] log likelihood: -626954.224587
EM: Round [268] log likelihood: -626954.224466
EM: Round [269] log likelihood: -626954.224348
EM: Round [270] log likelihood: -626954.224231
EM: Round [271] log likelihood: -626954.224115
EM: Round [272] log likelihood: -626954.224001
EM: Round [273] log likelihood: -626954.223888
EM: Round [274] log likelihood: -626954.223777
EM: Round [275] log likelihood: -626954.223667
EM: Round [276] log likelihood: -626954.223558
EM: Round [277] log likelihood: -626954.223451
EM: Round [278] log likelihood: -626954.223344
EM: Round [279] log likelihood: -626954.223240
EM: Round [280] log likelihood: -626954.223136
EM: Round [281] log likelihood: -626954.223034
EM: Round [282] log likelihood: -626954.222933
EM: Round [283] log likelihood: -626954.222833
EM: Stopping iterations at round 283 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -626581.299746
EM: Round [1] log likelihood: -625633.842666
EM: Round [2] log likelihood: -625336.533402
EM: Round [3] log likelihood: -625208.491976
EM: Round [4] log likelihood: -625143.939733
EM: Round [5] log likelihood: -625108.208609
EM: Round [6] log likelihood: -625087.047144
EM: Round [7] log likelihood: -625073.778240
EM: Round [8] log likelihood: -625065.023294
EM: Round [9] log likelihood: -625058.978849
EM: Round [10] log likelihood: -625054.637477
EM: Round [11] log likelihood: -625051.411869
EM: Round [12] log likelihood: -625048.945374
EM: Round [13] log likelihood: -625047.012919
EM: Round [14] log likelihood: -625045.467331
EM: Round [15] log likelihood: -625044.209229
EM: Round [16] log likelihood: -625043.169553
EM: Round [17] log likelihood: -625042.299085
EM: Round [18] log likelihood: -625041.561950
EM: Round [19] log likelihood: -625040.931477
EM: Round [20] log likelihood: -625040.387488
EM: Round [21] log likelihood: -625039.914469
EM: Round [22] log likelihood: -625039.500324
EM: Round [23] log likelihood: -625039.135495
EM: Round [24] log likelihood: -625038.812340
EM: Round [25] log likelihood: -625038.524681
EM: Round [26] log likelihood: -625038.267476
EM: Round [27] log likelihood: -625038.036567
EM: Round [28] log likelihood: -625037.828499
EM: Round [29] log likelihood: -625037.640377
EM: Round [30] log likelihood: -625037.469759
EM: Round [31] log likelihood: -625037.314571
EM: Round [32] log likelihood: -625037.173041
EM: Round [33] log likelihood: -625037.043643
EM: Round [34] log likelihood: -625036.925064
EM: Round [35] log likelihood: -625036.816159
EM: Round [36] log likelihood: -625036.715934
EM: Round [37] log likelihood: -625036.623518
EM: Round [38] log likelihood: -625036.538143
EM: Round [39] log likelihood: -625036.459135
EM: Round [40] log likelihood: -625036.385897
EM: Round [41] log likelihood: -625036.317898
EM: Round [42] log likelihood: -625036.254668
EM: Round [43] log likelihood: -625036.195785
EM: Round [44] log likelihood: -625036.140874
EM: Round [45] log likelihood: -625036.089597
EM: Round [46] log likelihood: -625036.041651
EM: Round [47] log likelihood: -625035.996765
EM: Round [48] log likelihood: -625035.954691
EM: Round [49] log likelihood: -625035.915208
EM: Round [50] log likelihood: -625035.878114
EM: Round [51] log likelihood: -625035.843226
EM: Round [52] log likelihood: -625035.810380
EM: Round [53] log likelihood: -625035.779424
EM: Round [54] log likelihood: -625035.750221
EM: Round [55] log likelihood: -625035.722645
EM: Round [56] log likelihood: -625035.696581
EM: Round [57] log likelihood: -625035.671925
EM: Round [58] log likelihood: -625035.648581
EM: Round [59] log likelihood: -625035.626460
EM: Round [60] log likelihood: -625035.605482
EM: Round [61] log likelihood: -625035.585571
EM: Round [62] log likelihood: -625035.566660
EM: Round [63] log likelihood: -625035.548684
EM: Round [64] log likelihood: -625035.531586
EM: Round [65] log likelihood: -625035.515311
EM: Round [66] log likelihood: -625035.499810
EM: Round [67] log likelihood: -625035.485035
EM: Round [68] log likelihood: -625035.470946
EM: Round [69] log likelihood: -625035.457500
EM: Round [70] log likelihood: -625035.444663
EM: Round [71] log likelihood: -625035.432398
EM: Round [72] log likelihood: -625035.420674
EM: Round [73] log likelihood: -625035.409462
EM: Round [74] log likelihood: -625035.398733
EM: Round [75] log likelihood: -625035.388462
EM: Round [76] log likelihood: -625035.378624
EM: Round [77] log likelihood: -625035.369196
EM: Round [78] log likelihood: -625035.360158
EM: Round [79] log likelihood: -625035.351489
EM: Round [80] log likelihood: -625035.343171
EM: Round [81] log likelihood: -625035.335186
EM: Round [82] log likelihood: -625035.327517
EM: Round [83] log likelihood: -625035.320150
EM: Round [84] log likelihood: -625035.313070
EM: Round [85] log likelihood: -625035.306263
EM: Round [86] log likelihood: -625035.299716
EM: Round [87] log likelihood: -625035.293417
EM: Round [88] log likelihood: -625035.287355
EM: Round [89] log likelihood: -625035.281519
EM: Round [90] log likelihood: -625035.275898
EM: Round [91] log likelihood: -625035.270483
EM: Round [92] log likelihood: -625035.265265
EM: Round [93] log likelihood: -625035.260235
EM: Round [94] log likelihood: -625035.255385
EM: Round [95] log likelihood: -625035.250707
EM: Round [96] log likelihood: -625035.246194
EM: Round [97] log likelihood: -625035.241839
EM: Round [98] log likelihood: -625035.237636
EM: Round [99] log likelihood: -625035.233577
EM: Round [100] log likelihood: -625035.229657
EM: Round [101] log likelihood: -625035.225871
EM: Round [102] log likelihood: -625035.222212
EM: Round [103] log likelihood: -625035.218676
EM: Round [104] log likelihood: -625035.215258
EM: Round [105] log likelihood: -625035.211953
EM: Round [106] log likelihood: -625035.208757
EM: Round [107] log likelihood: -625035.205665
EM: Round [108] log likelihood: -625035.202674
EM: Round [109] log likelihood: -625035.199780
EM: Round [110] log likelihood: -625035.196978
EM: Round [111] log likelihood: -625035.194266
EM: Round [112] log likelihood: -625035.191639
EM: Round [113] log likelihood: -625035.189096
EM: Round [114] log likelihood: -625035.186632
EM: Round [115] log likelihood: -625035.184245
EM: Round [116] log likelihood: -625035.181932
EM: Round [117] log likelihood: -625035.179690
EM: Round [118] log likelihood: -625035.177517
EM: Round [119] log likelihood: -625035.175410
EM: Round [120] log likelihood: -625035.173366
EM: Round [121] log likelihood: -625035.171385
EM: Round [122] log likelihood: -625035.169462
EM: Round [123] log likelihood: -625035.167597
EM: Round [124] log likelihood: -625035.165788
EM: Round [125] log likelihood: -625035.164031
EM: Round [126] log likelihood: -625035.162326
EM: Round [127] log likelihood: -625035.160671
EM: Round [128] log likelihood: -625035.159064
EM: Round [129] log likelihood: -625035.157503
EM: Round [130] log likelihood: -625035.155987
EM: Round [131] log likelihood: -625035.154514
EM: Round [132] log likelihood: -625035.153083
EM: Round [133] log likelihood: -625035.151693
EM: Round [134] log likelihood: -625035.150341
EM: Round [135] log likelihood: -625035.149028
EM: Round [136] log likelihood: -625035.147750
EM: Round [137] log likelihood: -625035.146509
EM: Round [138] log likelihood: -625035.145301
EM: Round [139] log likelihood: -625035.144126
EM: Round [140] log likelihood: -625035.142984
EM: Round [141] log likelihood: -625035.141872
EM: Round [142] log likelihood: -625035.140790
EM: Round [143] log likelihood: -625035.139738
EM: Round [144] log likelihood: -625035.138713
EM: Round [145] log likelihood: -625035.137715
EM: Round [146] log likelihood: -625035.136744
EM: Round [147] log likelihood: -625035.135799
EM: Round [148] log likelihood: -625035.134878
EM: Round [149] log likelihood: -625035.133980
EM: Round [150] log likelihood: -625035.133106
EM: Round [151] log likelihood: -625035.132255
EM: Round [152] log likelihood: -625035.131425
EM: Round [153] log likelihood: -625035.130617
EM: Round [154] log likelihood: -625035.129828
EM: Round [155] log likelihood: -625035.129060
EM: Round [156] log likelihood: -625035.128311
EM: Round [157] log likelihood: -625035.127580
EM: Round [158] log likelihood: -625035.126867
EM: Round [159] log likelihood: -625035.126172
EM: Round [160] log likelihood: -625035.125494
EM: Round [161] log likelihood: -625035.124833
EM: Round [162] log likelihood: -625035.124187
EM: Round [163] log likelihood: -625035.123557
EM: Round [164] log likelihood: -625035.122942
EM: Round [165] log likelihood: -625035.122342
EM: Round [166] log likelihood: -625035.121755
EM: Round [167] log likelihood: -625035.121183
EM: Round [168] log likelihood: -625035.120624
EM: Round [169] log likelihood: -625035.120078
EM: Round [170] log likelihood: -625035.119544
EM: Round [171] log likelihood: -625035.119023
EM: Round [172] log likelihood: -625035.118513
EM: Round [173] log likelihood: -625035.118015
EM: Round [174] log likelihood: -625035.117529
EM: Round [175] log likelihood: -625035.117053
EM: Round [176] log likelihood: -625035.116588
EM: Round [177] log likelihood: -625035.116133
EM: Round [178] log likelihood: -625035.115688
EM: Round [179] log likelihood: -625035.115253
EM: Round [180] log likelihood: -625035.114827
EM: Round [181] log likelihood: -625035.114410
EM: Round [182] log likelihood: -625035.114003
EM: Round [183] log likelihood: -625035.113604
EM: Round [184] log likelihood: -625035.113213
EM: Round [185] log likelihood: -625035.112831
EM: Round [186] log likelihood: -625035.112456
EM: Round [187] log likelihood: -625035.112090
EM: Round [188] log likelihood: -625035.111731
EM: Round [189] log likelihood: -625035.111379
EM: Round [190] log likelihood: -625035.111034
EM: Round [191] log likelihood: -625035.110697
EM: Round [192] log likelihood: -625035.110366
EM: Round [193] log likelihood: -625035.110042
EM: Round [194] log likelihood: -625035.109724
EM: Round [195] log likelihood: -625035.109413
EM: Round [196] log likelihood: -625035.109107
EM: Round [197] log likelihood: -625035.108808
EM: Round [198] log likelihood: -625035.108514
EM: Round [199] log likelihood: -625035.108226
EM: Round [200] log likelihood: -625035.107943
EM: Round [201] log likelihood: -625035.107666
EM: Round [202] log likelihood: -625035.107394
EM: Round [203] log likelihood: -625035.107127
EM: Round [204] log likelihood: -625035.106865
EM: Round [205] log likelihood: -625035.106608
EM: Round [206] log likelihood: -625035.106355
EM: Round [207] log likelihood: -625035.106107
EM: Round [208] log likelihood: -625035.105864
EM: Round [209] log likelihood: -625035.105625
EM: Round [210] log likelihood: -625035.105390
EM: Round [211] log likelihood: -625035.105159
EM: Round [212] log likelihood: -625035.104932
EM: Round [213] log likelihood: -625035.104709
EM: Round [214] log likelihood: -625035.104491
EM: Round [215] log likelihood: -625035.104275
EM: Round [216] log likelihood: -625035.104064
EM: Round [217] log likelihood: -625035.103856
EM: Round [218] log likelihood: -625035.103651
EM: Round [219] log likelihood: -625035.103450
EM: Round [220] log likelihood: -625035.103253
EM: Round [221] log likelihood: -625035.103058
EM: Round [222] log likelihood: -625035.102867
EM: Round [223] log likelihood: -625035.102679
EM: Round [224] log likelihood: -625035.102494
EM: Round [225] log likelihood: -625035.102311
EM: Round [226] log likelihood: -625035.102132
EM: Round [227] log likelihood: -625035.101956
EM: Round [228] log likelihood: -625035.101782
EM: Round [229] log likelihood: -625035.101611
EM: Round [230] log likelihood: -625035.101442
EM: Round [231] log likelihood: -625035.101277
EM: Round [232] log likelihood: -625035.101113
EM: Round [233] log likelihood: -625035.100952
EM: Round [234] log likelihood: -625035.100794
EM: Round [235] log likelihood: -625035.100638
EM: Round [236] log likelihood: -625035.100484
EM: Round [237] log likelihood: -625035.100333
EM: Round [238] log likelihood: -625035.100184
EM: Round [239] log likelihood: -625035.100036
EM: Round [240] log likelihood: -625035.099891
EM: Round [241] log likelihood: -625035.099749
EM: Round [242] log likelihood: -625035.099608
EM: Round [243] log likelihood: -625035.099469
EM: Round [244] log likelihood: -625035.099332
EM: Round [245] log likelihood: -625035.099197
EM: Round [246] log likelihood: -625035.099064
EM: Round [247] log likelihood: -625035.098932
EM: Round [248] log likelihood: -625035.098803
EM: Round [249] log likelihood: -625035.098675
EM: Round [250] log likelihood: -625035.098549
EM: Round [251] log likelihood: -625035.098425
EM: Round [252] log likelihood: -625035.098302
EM: Round [253] log likelihood: -625035.098181
EM: Round [254] log likelihood: -625035.098061
EM: Round [255] log likelihood: -625035.097943
EM: Round [256] log likelihood: -625035.097827
EM: Round [257] log likelihood: -625035.097712
EM: Round [258] log likelihood: -625035.097598
EM: Round [259] log likelihood: -625035.097486
EM: Round [260] log likelihood: -625035.097376
EM: Round [261] log likelihood: -625035.097267
EM: Round [262] log likelihood: -625035.097159
EM: Round [263] log likelihood: -625035.097052
EM: Round [264] log likelihood: -625035.096947
EM: Round [265] log likelihood: -625035.096843
EM: Round [266] log likelihood: -625035.096741
EM: Round [267] log likelihood: -625035.096639
EM: Round [268] log likelihood: -625035.096539
EM: Round [269] log likelihood: -625035.096440
EM: Stopping iterations at round 269 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 27607396 > /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir > /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir --annotate /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir
-done, see /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 627, filtered: 6374)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000181577.16]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000267260.2]
WARNING, no entry stored in dbm for [ENSG00000181577.16]
WARNING, no entry stored in dbm for [ENSG00000127957.18]
WARNING, no entry stored in dbm for [ENSG00000285835.1]
WARNING, no entry stored in dbm for [ENSG00000250754.6]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000287358.1]
WARNING, no entry stored in dbm for [ENSG00000180539.8]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000284613.1]
WARNING, no entry stored in dbm for [ENSG00000261329.6]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000260898.6]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000279217.1]
WARNING, no entry stored in dbm for [ENSG00000236404.10]
WARNING, no entry stored in dbm for [ENSG00000232724.1]
WARNING, no entry stored in dbm for [ENSG00000205791.3]
WARNING, no entry stored in dbm for [ENSG00000267260.2]
WARNING, no entry stored in dbm for [ENSG00000224812.3]
WARNING, no entry stored in dbm for [ENSG00000279593.1]
WARNING, no entry stored in dbm for [ENSG00000255136.3]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000256238.1]
WARNING, no entry stored in dbm for [ENSG00000256238.1]
WARNING, no entry stored in dbm for [ENSG00000213842.2]
WARNING, no entry stored in dbm for [ENSG00000254418.1]
WARNING, no entry stored in dbm for [ENSG00000249346.7]
WARNING, no entry stored in dbm for [ENSG00000259498.1]
WARNING, no entry stored in dbm for [ENSG00000254231.3]
WARNING, no entry stored in dbm for [ENSG00000226419.8]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000248124.8]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000259577.2]
WARNING, no entry stored in dbm for [ENSG00000285595.1]
WARNING, no entry stored in dbm for [ENSG00000207175.1]
WARNING, no entry stored in dbm for [ENSG00000268869.6]
WARNING, no entry stored in dbm for [ENSG00000245694.10]
WARNING, no entry stored in dbm for [ENSG00000278834.1]
WARNING, no entry stored in dbm for [ENSG00000259905.7]
WARNING, no entry stored in dbm for [ENSG00000224536.2]
WARNING, no entry stored in dbm for [ENSG00000266208.1]
WARNING, no entry stored in dbm for [ENSG00000231028.9]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000283839.1]
WARNING, no entry stored in dbm for [ENSG00000273129.2]
WARNING, no entry stored in dbm for [ENSG00000259341.2]
WARNING, no entry stored in dbm for [ENSG00000253604.1]
WARNING, no entry stored in dbm for [ENSG00000231840.2]
WARNING, no entry stored in dbm for [ENSG00000214820.3]
WARNING, no entry stored in dbm for [ENSG00000286642.1]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000253522.6]
WARNING, no entry stored in dbm for [ENSG00000253522.6]
WARNING, no entry stored in dbm for [ENSG00000244627.5]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000283631.1]
WARNING, no entry stored in dbm for [ENSG00000227050.1]
WARNING, no entry stored in dbm for [ENSG00000253553.7]
WARNING, no entry stored in dbm for [ENSG00000204650.14]
WARNING, no entry stored in dbm for [ENSG00000204650.14]
WARNING, no entry stored in dbm for [ENSG00000278416.1]
WARNING, no entry stored in dbm for [ENSG00000204650.14]
WARNING, no entry stored in dbm for [ENSG00000229437.2]
WARNING, no entry stored in dbm for [ENSG00000265480.5]
WARNING, no entry stored in dbm for [ENSG00000265480.5]
WARNING, no entry stored in dbm for [ENSG00000265480.5]
WARNING, no entry stored in dbm for [ENSG00000233665.8]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000244040.7]
WARNING, no entry stored in dbm for [ENSG00000255733.6]
WARNING, no entry stored in dbm for [ENSG00000257851.2]
WARNING, no entry stored in dbm for [ENSG00000257851.2]
WARNING, no entry stored in dbm for [ENSG00000131885.17]
WARNING, no entry stored in dbm for [ENSG00000257851.2]
WARNING, no entry stored in dbm for [ENSG00000257851.2]
WARNING, no entry stored in dbm for [ENSG00000257851.2]
WARNING, no entry stored in dbm for [ENSG00000237285.1]
WARNING, no entry stored in dbm for [ENSG00000273888.1]
WARNING, no entry stored in dbm for [ENSG00000277654.6]
WARNING, no entry stored in dbm for [ENSG00000259248.7]
WARNING, no entry stored in dbm for [ENSG00000287564.1]
WARNING, no entry stored in dbm for [ENSG00000264578.1]
WARNING, no entry stored in dbm for [ENSG00000204623.9]
WARNING, no entry stored in dbm for [ENSG00000257222.1]
WARNING, no entry stored in dbm for [ENSG00000267260.2]
WARNING, no entry stored in dbm for [ENSG00000234840.2]
WARNING, no entry stored in dbm for [ENSG00000260898.6]
WARNING, no entry stored in dbm for [ENSG00000244089.1]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000278591.1]
WARNING, no entry stored in dbm for [ENSG00000275219.1]
WARNING, no entry stored in dbm for [ENSG00000274452.1]
WARNING, no entry stored in dbm for [ENSG00000274062.1]
WARNING, no entry stored in dbm for [ENSG00000274862.1]
WARNING, no entry stored in dbm for [ENSG00000278774.1]
WARNING, no entry stored in dbm for [ENSG00000277903.1]
WARNING, no entry stored in dbm for [ENSG00000276596.1]
WARNING, no entry stored in dbm for [ENSG00000278048.1]
WARNING, no entry stored in dbm for [ENSG00000274432.1]
WARNING, no entry stored in dbm for [ENSG00000273709.1]
WARNING, no entry stored in dbm for [ENSG00000275616.1]
WARNING, no entry stored in dbm for [ENSG00000222328.1]
WARNING, no entry stored in dbm for [ENSG00000274585.1]
WARNING, no entry stored in dbm for [ENSG00000241316.8]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000259488.2]
WARNING, no entry stored in dbm for [ENSG00000245080.7]
WARNING, no entry stored in dbm for [ENSG00000214425.8]
WARNING, no entry stored in dbm for [ENSG00000241155.1]
WARNING, no entry stored in dbm for [ENSG00000266522.1]
WARNING, no entry stored in dbm for [ENSG00000251143.1]
WARNING, no entry stored in dbm for [ENSG00000234498.3]
WARNING, no entry stored in dbm for [ENSG00000251143.1]
WARNING, no entry stored in dbm for [ENSG00000226987.1]
WARNING, no entry stored in dbm for [ENSG00000251049.2]
WARNING, no entry stored in dbm for [ENSG00000268673.3]
WARNING, no entry stored in dbm for [ENSG00000213514.2]
WARNING, no entry stored in dbm for [ENSG00000287263.1]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000224934.5]
WARNING, no entry stored in dbm for [ENSG00000223669.1]
WARNING, no entry stored in dbm for [ENSG00000234961.1]
WARNING, no entry stored in dbm for [ENSG00000228863.8]
WARNING, no entry stored in dbm for [ENSG00000287718.1]
WARNING, no entry stored in dbm for [ENSG00000287561.1]
WARNING, no entry stored in dbm for [ENSG00000288044.1]
WARNING, no entry stored in dbm for [ENSG00000287358.1]
WARNING, no entry stored in dbm for [ENSG00000287910.1]
WARNING, no entry stored in dbm for [ENSG00000275358.1]
WARNING, no entry stored in dbm for [ENSG00000230725.6]
WARNING, no entry stored in dbm for [ENSG00000279058.2]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000261011.1]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000260651.1]
WARNING, no entry stored in dbm for [ENSG00000276850.5]
WARNING, no entry stored in dbm for [ENSG00000237638.2]
WARNING, no entry stored in dbm for [ENSG00000274642.1]
WARNING, no entry stored in dbm for [ENSG00000233396.8]
WARNING, no entry stored in dbm for [ENSG00000285184.3]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000235126.1]
WARNING, no entry stored in dbm for [ENSG00000270055.1]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000277511.1]
WARNING, no entry stored in dbm for [ENSG00000272763.1]
WARNING, no entry stored in dbm for [ENSG00000232760.1]
WARNING, no entry stored in dbm for [ENSG00000273230.1]
WARNING, no entry stored in dbm for [ENSG00000287676.1]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000264578.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000273391.1]
WARNING, no entry stored in dbm for [ENSG00000235140.2]
WARNING, no entry stored in dbm for [ENSG00000279569.1]
WARNING, no entry stored in dbm for [ENSG00000225937.3]
WARNING, no entry stored in dbm for [ENSG00000279569.1]
WARNING, no entry stored in dbm for [ENSG00000286030.2]
WARNING, no entry stored in dbm for [ENSG00000197813.6]
WARNING, no entry stored in dbm for [ENSG00000229689.3]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000260905.1]
WARNING, no entry stored in dbm for [ENSG00000276548.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000286220.1]
WARNING, no entry stored in dbm for [ENSG00000272568.6]
WARNING, no entry stored in dbm for [ENSG00000250132.6]


	* STAR-Fusion complete.  See output: /tmp/nxf.KzcTt0xLC4/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)