Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ed/828ef0c9905e71f3b2623188782ce3/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ed/828ef0c9905e71f3b2623188782ce3/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/95/4b135024d45d0ac9f1ff16ee831e71/1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/29/8a94d2095fb88e7dbdc9ec62437b03/1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1_2.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/29/8a94d2095fb88e7dbdc9ec62437b03/1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1_1.fastp.fastq.gz ==> STAGING COMPLETE (6 inputs) -ctat genome lib [/tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.KzcTt0xLC4/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary -sample contains 27607396 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir -J /tmp/nxf.KzcTt0xLC4/1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction -O /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.KzcTt0xLC4/1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=120000.00/min [20000], rate=109090.91/min [30000], rate=112500.00/min [40000], rate=109090.91/min [50000], rate=103448.28/min [60000], rate=109090.91/min [70000], rate=113513.51/min [80000], rate=114285.71/min [90000], rate=114893.62/min [100000], rate=113207.55/min [110000], rate=117857.14/min [120000], rate=122033.90/min [130000], rate=127868.85/min [140000], rate=127272.73/min [150000], rate=126760.56/min [160000], rate=128000.00/min [170000], rate=130769.23/min [180000], rate=130120.48/min [190000], rate=131034.48/min [200000], rate=130434.78/min [210000], rate=131250.00/min [220000], rate=132000.00/min [230000], rate=132692.31/min [240000], rate=133333.33/min [250000], rate=135135.14/min [260000], rate=134482.76/min [270000], rate=135000.00/min [280000], rate=135483.87/min [290000], rate=135937.50/min [300000], rate=136363.64/min [310000], rate=137777.78/min [320000], rate=140145.99/min [330000], rate=143478.26/min [340000], rate=144680.85/min [350000], rate=144827.59/min [360000], rate=147945.21/min [370000], rate=150000.00/min [380000], rate=150993.38/min [390000], rate=150000.00/min [400000], rate=151898.73/min [410000], rate=150920.25/min [420000], rate=150000.00/min [430000], rate=150000.00/min [440000], rate=151724.14/min [450000], rate=153409.09/min [460000], rate=152486.19/min [470000], rate=151612.90/min [480000], rate=150785.34/min [490000], rate=152331.61/min [500000], rate=151515.15/min [510000], rate=151485.15/min [520000], rate=150724.64/min [530000], rate=150710.90/min [540000], rate=149308.76/min [550000], rate=147321.43/min [560000], rate=148017.62/min [570000], rate=146781.12/min [580000], rate=146218.49/min [590000], rate=145679.01/min [600000], rate=146341.46/min [610000], rate=146987.95/min [620000], rate=147035.57/min [630000], rate=147656.25/min [640000], rate=148837.21/min [650000], rate=150000.00/min [660000], rate=151145.04/min [670000], rate=152272.73/min [680000], rate=153962.26/min [690000], rate=153903.35/min [700000], rate=154411.76/min [710000], rate=154909.09/min [720000], rate=155395.68/min [730000], rate=154770.32/min [740000], rate=155244.76/min [750000], rate=154639.18/min [760000], rate=155631.40/min [770000], rate=155555.56/min [780000], rate=157046.98/min [790000], rate=157475.08/min [800000], rate=157377.05/min [810000], rate=158823.53/min [820000], rate=160260.59/min [830000], rate=161688.31/min [840000], rate=163636.36/min [850000], rate=165584.42/min [860000], rate=167532.47/min [870000], rate=169480.52/min [880000], rate=171428.57/min [890000], rate=171704.18/min [900000], rate=171428.57/min [910000], rate=172239.75/min [920000], rate=170897.83/min [930000], rate=170121.95/min [940000], rate=169879.52/min [950000], rate=170149.25/min [960000], rate=170919.88/min [970000], rate=171681.42/min [980000], rate=171929.82/min [990000], rate=172674.42/min [1000000], rate=171919.77/min [1010000], rate=170224.72/min [1020000], rate=170000.00/min [1030000], rate=168852.46/min [1040000], rate=168194.07/min [1050000], rate=167553.19/min [1060000], rate=166929.13/min [1070000], rate=165891.47/min [1080000], rate=165306.12/min [1090000], rate=164735.52/min [1100000], rate=165000.00/min [1110000], rate=166084.79/min [1120000], rate=165925.93/min [1130000], rate=164963.50/min [1140000], rate=164423.08/min [1150000], rate=165071.77/min [1160000], rate=164539.01/min [1170000], rate=164402.81/min [1180000], rate=163888.89/min [1190000], rate=163761.47/min [1200000], rate=163636.36/min [1210000], rate=163513.51/min [1220000], rate=163392.86/min [1230000], rate=163274.34/min [1240000], rate=162800.88/min [1250000], rate=162689.80/min [1260000], rate=162580.65/min [1270000], rate=162127.66/min [1280000], rate=162025.32/min [1290000], rate=162264.15/min [1300000], rate=162500.00/min [1310000], rate=163409.56/min [1320000], rate=163975.16/min [1330000], rate=164197.53/min [1340000], rate=164417.18/min [1350000], rate=164634.15/min [1360000], rate=165182.19/min [1370000], rate=163745.02/min [1380000], rate=164285.71/min [1390000], rate=164822.13/min [1400000], rate=163742.69/min [1410000], rate=163636.36/min [1420000], rate=163531.67/min [1430000], rate=164053.54/min [1440000], rate=163636.36/min [1450000], rate=163227.02/min [1460000], rate=162825.28/min [1470000], rate=162730.63/min [1480000], rate=162340.04/min [1490000], rate=162250.45/min [1500000], rate=161870.50/min [1510000], rate=161209.96/min [1520000], rate=160846.56/min [1530000], rate=159930.31/min [1540000], rate=159585.49/min [1550000], rate=159519.73/min [1560000], rate=158913.41/min [1570000], rate=158319.33/min [1580000], rate=158263.77/min [1590000], rate=158471.76/min [1600000], rate=158415.84/min [1610000], rate=158620.69/min [1620000], rate=159083.47/min [1630000], rate=159543.23/min [1640000], rate=159740.26/min [1650000], rate=160194.17/min [1660000], rate=160645.16/min [1670000], rate=161093.25/min [1680000], rate=161022.36/min [1690000], rate=160952.38/min [1700000], rate=160883.28/min [1710000], rate=160815.05/min [1720000], rate=161250.00/min [1730000], rate=160930.23/min [1740000], rate=161111.11/min [1750000], rate=161042.94/min [1760000], rate=161467.89/min [1770000], rate=161890.24/min [1780000], rate=161818.18/min [1790000], rate=162235.65/min [1800000], rate=162895.93/min [1810000], rate=163554.22/min [1820000], rate=164457.83/min [1830000], rate=165361.45/min [1840000], rate=166265.06/min [1850000], rate=166917.29/min [1860000], rate=167819.55/min [1870000], rate=168468.47/min [1880000], rate=168862.28/min [1890000], rate=168249.26/min [1900000], rate=168141.59/min [1910000], rate=167789.17/min [1920000], rate=167685.59/min [1930000], rate=167341.04/min [1940000], rate=167241.38/min [1950000], rate=166666.67/min [1960000], rate=166101.69/min [1970000], rate=165546.22/min [1980000], rate=165000.00/min [1990000], rate=164917.13/min [2000000], rate=164835.16/min [2010000], rate=164529.33/min [2020000], rate=164227.64/min [2030000], rate=164150.94/min [2040000], rate=163636.36/min [2050000], rate=163781.62/min [2060000], rate=164361.70/min [2070000], rate=164285.71/min [2080000], rate=163994.74/min [2090000], rate=163707.57/min [2100000], rate=163849.15/min [2110000], rate=163777.49/min [2120000], rate=163706.56/min [2130000], rate=163636.36/min [2140000], rate=163566.88/min [2150000], rate=163498.10/min [2160000], rate=163430.01/min [2170000], rate=163567.84/min [2180000], rate=163295.88/min [2190000], rate=163432.84/min [2200000], rate=162962.96/min [2210000], rate=162899.26/min [2220000], rate=163035.50/min [2230000], rate=162773.72/min [2240000], rate=162711.86/min [2250000], rate=162846.80/min [2260000], rate=162980.77/min [2270000], rate=163701.92/min [2280000], rate=163832.34/min [2290000], rate=163961.81/min [2300000], rate=164285.71/min [2310000], rate=164608.08/min [2320000], rate=164539.01/min [2330000], rate=164084.51/min [2340000], rate=164402.81/min [2350000], rate=164144.35/min [2360000], rate=163888.89/min [2370000], rate=163824.88/min [2380000], rate=163949.48/min [2390000], rate=164073.23/min [2400000], rate=163636.36/min [2410000], rate=163574.66/min [2420000], rate=163329.58/min [2430000], rate=163269.88/min [2440000], rate=163028.95/min [2450000], rate=162971.18/min [2460000], rate=162555.07/min [2470000], rate=162322.02/min [2480000], rate=161915.13/min [2490000], rate=161513.51/min [2500000], rate=161290.32/min [2510000], rate=161069.52/min [2520000], rate=160680.13/min [2530000], rate=160295.67/min [2540000], rate=160590.09/min [2550000], rate=160714.29/min [2560000], rate=160669.46/min [2570000], rate=160960.33/min [2580000], rate=161250.00/min [2590000], rate=161370.72/min [2600000], rate=161490.68/min [2610000], rate=161776.86/min [2620000], rate=161728.40/min [2630000], rate=161680.33/min [2640000], rate=161632.65/min [2650000], rate=161749.75/min [2660000], rate=161866.13/min [2670000], rate=161981.80/min [2680000], rate=162096.77/min [2690000], rate=162374.25/min [2700000], rate=162324.65/min [2710000], rate=162600.00/min [2720000], rate=163036.96/min [2730000], rate=163310.07/min [2740000], rate=163745.02/min [2750000], rate=164179.10/min [2760000], rate=164612.33/min [2770000], rate=165208.75/min [2780000], rate=165805.17/min [2790000], rate=166236.35/min [2800000], rate=166666.67/min [2810000], rate=166765.58/min [2820000], rate=166863.91/min [2830000], rate=166633.95/min [2840000], rate=166568.91/min [2850000], rate=166180.76/min [2860000], rate=165957.45/min [2870000], rate=166216.22/min [2880000], rate=166313.76/min [2890000], rate=166570.61/min [2900000], rate=166666.67/min [2910000], rate=166921.61/min [2920000], rate=167016.21/min [2930000], rate=166635.07/min [2940000], rate=166258.25/min [2950000], rate=165885.66/min [2960000], rate=165517.24/min [2970000], rate=165306.12/min [2980000], rate=165249.54/min [2990000], rate=164889.71/min [3000000], rate=164684.35/min [3010000], rate=164331.21/min [3020000], rate=164279.24/min [3030000], rate=164376.13/min [3040000], rate=164769.65/min [3050000], rate=164568.35/min [3060000], rate=164221.82/min [3070000], rate=164171.12/min [3080000], rate=164266.67/min [3090000], rate=164070.80/min [3100000], rate=164021.16/min [3110000], rate=163827.92/min [3120000], rate=163779.53/min [3130000], rate=163731.47/min [3140000], rate=163683.75/min [3150000], rate=163636.36/min [3160000], rate=163589.30/min [3170000], rate=163402.06/min [3180000], rate=163356.16/min [3190000], rate=163450.04/min [3200000], rate=163265.31/min [3210000], rate=163358.78/min [3220000], rate=163451.78/min [3230000], rate=163682.43/min [3240000], rate=164050.63/min [3250000], rate=164141.41/min [3260000], rate=164231.74/min [3270000], rate=164459.35/min [3280000], rate=164548.49/min -building interval tree based on /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=50000.00/min [20000], rate=54545.45/min [30000], rate=56250.00/min [40000], rate=63157.89/min [50000], rate=66666.67/min [60000], rate=65454.55/min [70000], rate=64615.38/min [80000], rate=67605.63/min [90000], rate=68354.43/min [100000], rate=68181.82/min [110000], rate=68750.00/min [120000], rate=67924.53/min [130000], rate=67826.09/min [140000], rate=67741.94/min [150000], rate=69230.77/min [160000], rate=70072.99/min [170000], rate=71328.67/min [180000], rate=72972.97/min [190000], rate=74025.97/min [200000], rate=75000.00/min [210000], rate=74556.21/min [220000], rate=75862.07/min [230000], rate=76243.09/min [240000], rate=78260.87/min [250000], rate=78534.03/min [260000], rate=80412.37/min [270000], rate=81818.18/min [280000], rate=82758.62/min [290000], rate=84057.97/min [300000], rate=85308.06/min [310000], rate=87323.94/min [320000], rate=87272.73/min [330000], rate=84615.38/min [340000], rate=82258.06/min [350000], rate=80459.77/min [360000], rate=78545.45/min [370000], rate=77622.38/min [380000], rate=76254.18/min [390000], rate=75241.16/min [400000], rate=73846.15/min [410000], rate=72781.07/min [420000], rate=72000.00/min [430000], rate=71666.67/min [440000], rate=70967.74/min [450000], rate=70129.87/min [460000], rate=69696.97/min [470000], rate=69117.65/min [480000], rate=68899.52/min [490000], rate=68691.59/min [500000], rate=68337.13/min [510000], rate=68151.45/min [520000], rate=67973.86/min [530000], rate=68094.22/min [540000], rate=68210.53/min [550000], rate=68041.24/min [560000], rate=67741.94/min [570000], rate=67588.93/min [580000], rate=67441.86/min [590000], rate=67816.09/min [600000], rate=67796.61/min [610000], rate=68029.74/min [620000], rate=68382.35/min [630000], rate=68602.54/min [640000], rate=69189.19/min [650000], rate=69642.86/min [660000], rate=70088.50/min [670000], rate=70526.32/min [680000], rate=70956.52/min [690000], rate=71379.31/min [700000], rate=71794.87/min [710000], rate=72448.98/min [720000], rate=72849.92/min [730000], rate=73000.00/min [740000], rate=73388.43/min [750000], rate=73649.75/min [760000], rate=73548.39/min [770000], rate=73566.88/min [780000], rate=73817.03/min [790000], rate=74178.40/min [800000], rate=74650.08/min [810000], rate=75000.00/min [820000], rate=75344.56/min [830000], rate=76030.53/min [840000], rate=76363.64/min [850000], rate=76807.23/min [860000], rate=77245.51/min [870000], rate=77563.15/min [880000], rate=77533.04/min [890000], rate=77616.28/min [900000], rate=77809.80/min [910000], rate=78000.00/min [920000], rate=78186.97/min [930000], rate=78370.79/min [940000], rate=78442.28/min [950000], rate=78620.69/min [960000], rate=78688.52/min [970000], rate=78861.79/min [980000], rate=79138.63/min [990000], rate=79305.74/min [1000000], rate=79575.60/min [1010000], rate=79841.90/min [1020000], rate=80000.00/min [1030000], rate=80259.74/min [1040000], rate=80412.37/min [1050000], rate=80665.81/min [1060000], rate=80916.03/min [1070000], rate=81060.61/min [1080000], rate=81304.89/min [1090000], rate=81750.00/min [1100000], rate=81987.58/min [1110000], rate=82222.22/min [1120000], rate=82656.83/min [1130000], rate=82885.09/min [1140000], rate=83414.63/min [1150000], rate=83941.61/min 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rate=90634.44/min [1510000], rate=90963.86/min [1520000], rate=91108.89/min [1530000], rate=91252.49/min [1540000], rate=91394.66/min [1550000], rate=91535.43/min [1560000], rate=91495.60/min [1570000], rate=91545.19/min [1580000], rate=91860.47/min [1590000], rate=91996.14/min [1600000], rate=92307.69/min [1610000], rate=92706.33/min [1620000], rate=93103.45/min [1630000], rate=93320.61/min [1640000], rate=93358.63/min [1650000], rate=93308.20/min [1660000], rate=93345.83/min [1670000], rate=93383.04/min [1680000], rate=93593.31/min [1690000], rate=93975.90/min [1700000], rate=94269.87/min [1710000], rate=94475.14/min [1720000], rate=94765.84/min [1730000], rate=94794.52/min [1740000], rate=94650.95/min [1750000], rate=94509.45/min [1760000], rate=94454.38/min [1770000], rate=94400.00/min [1780000], rate=94429.71/min [1790000], rate=94293.24/min [1800000], rate=94240.84/min [1810000], rate=94107.45/min [1820000], rate=94056.85/min [1830000], rate=94006.85/min [1840000], 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[2860000], rate=101179.25/min [2870000], rate=101294.12/min [2880000], rate=101527.61/min [2890000], rate=101700.88/min [2900000], rate=101813.93/min [2910000], rate=101985.98/min [2920000], rate=102038.44/min [2930000], rate=102090.59/min [2940000], rate=102201.62/min [2950000], rate=102253.03/min [2960000], rate=102245.25/min [2970000], rate=102354.97/min [2980000], rate=102464.18/min [2990000], rate=102514.29/min [3000000], rate=102739.73/min [3010000], rate=102847.38/min [3020000], rate=102954.55/min [3030000], rate=103178.21/min [3040000], rate=103460.01/min [3050000], rate=103741.50/min [3060000], rate=104022.66/min [3070000], rate=104244.48/min [3080000], rate=104584.04/min [3090000], rate=104864.25/min [3100000], rate=105144.15/min [3110000], rate=105483.32/min [3120000], rate=105762.71/min [3130000], rate=105981.94/min [3140000], rate=106140.85/min [3150000], rate=106120.16/min [3160000], rate=106218.49/min [3170000], rate=106138.39/min [3180000], rate=106176.96/min [3190000], rate=106333.33/min [3200000], rate=106430.16/min [3210000], rate=106585.50/min [3220000], rate=106799.34/min [3230000], rate=106953.64/min [3240000], rate=107107.44/min [3250000], rate=107025.25/min [3260000], rate=107002.19/min [3270000], rate=107037.64/min [3280000], rate=106898.42/min [3290000], rate=106876.02/min [3300000], rate=106911.45/min [3310000], rate=106946.69/min [3320000], rate=106866.95/min [3330000], rate=106844.92/min 00], rate=94530.32/min [2660000], rate=94437.87/min [2670000], rate=94346.29/min [2680000], rate=94310.85/min [2690000], rate=94496.49/min [2700000], rate=94515.75/min [2710000], rate=94370.28/min [2720000], rate=94280.76/min [2730000], rate=94246.26/min [2740000], rate=94158.08/min [2750000], rate=94178.08/min [2760000], rate=94197.95/min [2770000], rate=94271.13/min [2780000], rate=94343.89/min [2790000], rate=94576.27/min [2800000], rate=94808.13/min [2810000], rate=94879.01/min [2820000], rate=95056.18/min [2830000], rate=95179.37/min [2840000], rate=95302.01/min [2850000], rate=95264.62/min [2860000], rate=95174.71/min [2870000], rate=95138.12/min [2880000], rate=95049.50/min [2890000], rate=95013.70/min [2900000], rate=94978.17/min [2910000], rate=95046.27/min [2920000], rate=95114.01/min [2930000], rate=95129.87/min [2940000], rate=95145.63/min [2950000], rate=95212.48/min [2960000], rate=95227.88/min [2970000], rate=95294.12/min [2980000], rate=95410.89/min [2990000], rate=95527.16/min [3000000], rate=95693.78/min [3010000], rate=95859.87/min [3020000], rate=96025.44/min [3030000], rate=96190.48/min [3040000], rate=96405.92/min [3050000], rate=96569.92/min [3060000], rate=96784.40/min [3070000], rate=96998.42/min [3080000], rate=97211.99/min [3090000], rate=97425.12/min [3100000], rate=97535.40/min [3110000], rate=97747.51/min [3120000], rate=97703.55/min [3130000], rate=97761.58/min [3140000], rate=97768.55/min [3150000], rate=97724.92/min [3160000], rate=97782.36/min [3170000], rate=97839.51/min [3180000], rate=97896.36/min [3190000], rate=97952.92/min [3200000], rate=98009.19/min [3210000], rate=98115.13/min [3220000], rate=98170.73/min [3230000], rate=98275.86/min [3240000], rate=98380.57/min [3250000], rate=98484.85/min [3260000], rate=98588.71/min [3270000], rate=98741.82/min [3280000], rate=98944.19/min [3290000], rate=99096.39/min [3300000], rate=99248.12/min [3310000], rate=99399.40/min [3320000], rate=99600.00/min .64/min [2700000], rate=88043.48/min [2710000], rate=88177.87/min [2720000], rate=88311.69/min [2730000], rate=88444.92/min [2740000], rate=88625.34/min [2750000], rate=88805.17/min [2760000], rate=88984.42/min [2770000], rate=88829.50/min [2780000], rate=88723.40/min [2790000], rate=88618.32/min [2800000], rate=88514.23/min [2810000], rate=88364.78/min [2820000], rate=88308.98/min [2830000], rate=88253.64/min [2840000], rate=88153.13/min [2850000], rate=88144.33/min [2860000], rate=88090.35/min [2870000], rate=88081.84/min [2880000], rate=88118.31/min [2890000], rate=88154.55/min [2900000], rate=88145.90/min [2910000], rate=88181.82/min [2920000], rate=88217.52/min [2930000], rate=88297.34/min [2940000], rate=88376.75/min [2950000], rate=88455.77/min [2960000], rate=88578.55/min [2970000], rate=88745.02/min [2980000], rate=88999.50/min [2990000], rate=89165.01/min [3000000], rate=89418.78/min [3010000], rate=89672.29/min [3020000], rate=89791.87/min [3030000], rate=89910.98/min [3040000], rate=90074.07/min [3050000], rate=90192.21/min [3060000], rate=90309.89/min [3070000], rate=90471.51/min [3080000], rate=90632.66/min [3090000], rate=90793.34/min [3100000], rate=90953.55/min [3110000], rate=91068.81/min [3120000], rate=91228.07/min [3130000], rate=91298.01/min [3140000], rate=91367.60/min [3150000], rate=91525.42/min [3160000], rate=91638.47/min [3170000], rate=91795.37/min [3180000], rate=91951.81/min [3190000], rate=92107.80/min [3200000], rate=92307.69/min [3210000], rate=92507.20/min [3220000], rate=92617.45/min [3230000], rate=92505.97/min [3240000], rate=92483.35/min [3250000], rate=92373.28/min [3260000], rate=92307.69/min [3270000], rate=92242.60/min [3280000], rate=92177.99/min [3290000], rate=92113.86/min [3300000], rate=91964.70/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir --filt_file /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 6000000.00 reads per min processed... 12000000.00 reads per min processed... 9000000.00 reads per min processed... 12000000.00 reads per min processed... 15000000.00 reads per min processed... 12000000.00 reads per min processed... 14000000.00 reads per min processed... 12000000.00 reads per min processed... 13500000.00 reads per min processed... 15000000.00 reads per min processed... 13200000.00 reads per min processed... 14400000.00 reads per min processed... 13000000.00 reads per min processed... 14000000.00 reads per min processed... 15000000.00 reads per min processed... 13714285.71 reads per min processed... 14571428.57 reads per min processed... 15428571.43 reads per min processed... 14250000.00 reads per min processed... 15000000.00 reads per min processed... 14000000.00 reads per min processed... 14666666.67 reads per min processed... 13800000.00 reads per min processed... 14400000.00 reads per min processed... 15000000.00 reads per min processed... 14181818.18 reads per min processed... 14727272.73 reads per min processed... 15272727.27 reads per min processed... 14500000.00 reads per min processed... 15000000.00 reads per min processed... 14307692.31 reads per min processed... 14769230.77 reads per min processed... 15230769.23 reads per min processed... 14571428.57 reads per min processed... 15000000.00 reads per min processed... 14400000.00 reads per min processed... 13875000.00 reads per min processed... 13411764.71 reads per min processed... 13000000.00 reads per min processed... 12000000.00 reads per min processed... 12300000.00 reads per min processed... 11454545.45 reads per min processed... 11217391.30 reads per min processed... 11000000.00 reads per min processed... 10800000.00 reads per min processed... 10615384.62 reads per min processed... 10846153.85 reads per min processed... 10666666.67 reads per min processed... 10500000.00 reads per min processed... 10344827.59 reads per min processed... 10200000.00 reads per min processed... 10064516.13 reads per min processed... 9937500.00 reads per min processed... 9818181.82 reads per min processed... 9705882.35 reads per min processed... 9600000.00 reads per min processed... 9500000.00 reads per min processed... 9666666.67 reads per min processed... 9567567.57 reads per min processed... 9473684.21 reads per min processed... 9384615.38 reads per min processed... 9300000.00 reads per min processed... 9219512.20 reads per min processed... 9142857.14 reads per min processed... 9069767.44 reads per min processed... 9209302.33 reads per min processed... 9136363.64 reads per min processed... 9272727.27 reads per min processed... 9200000.00 reads per min processed... 9333333.33 reads per min processed... 9466666.67 reads per min processed... 9391304.35 reads per min processed... 9319148.94 reads per min processed... 9446808.51 reads per min processed... 9375000.00 reads per min processed... 9500000.00 reads per min processed... 9625000.00 reads per min processed... 9551020.41 reads per min processed... 9480000.00 reads per min processed... 9600000.00 reads per min processed... 9529411.76 reads per min processed... 9647058.82 reads per min processed... 9764705.88 reads per min processed... 9692307.69 reads per min processed... 9807692.31 reads per min processed... 9735849.06 reads per min processed... 9666666.67 reads per min processed... 9777777.78 reads per min processed... 9709090.91 reads per min processed... 9818181.82 reads per min processed... 9927272.73 reads per min processed... 9857142.86 reads per min processed... 9964285.71 reads per min processed... 9894736.84 reads per min processed... 10000000.00 reads per min processed... 9931034.48 reads per min processed... 9864406.78 reads per min processed... 9800000.00 reads per min processed... 9580645.16 reads per min processed... 9523809.52 reads per min processed... 9468750.00 reads per min processed... 9415384.62 reads per min processed... 9363636.36 reads per min processed... 9313432.84 reads per min processed... 9264705.88 reads per min processed... 9217391.30 reads per min processed... 9171428.57 reads per min processed... 9126760.56 reads per min processed... 9083333.33 reads per min processed... 9166666.67 reads per min processed... 9123287.67 reads per min processed... 9081081.08 reads per min processed... 9040000.00 reads per min processed... 9000000.00 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.KzcTt0xLC4/1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -628804.556113 EM: Round [1] log likelihood: -627700.671941 EM: Round [2] log likelihood: -627340.614617 EM: Round [3] log likelihood: -627181.770280 EM: Round [4] log likelihood: -627100.177131 EM: Round [5] log likelihood: -627054.246270 EM: Round [6] log likelihood: -627026.588914 EM: Round [7] log likelihood: -627008.952966 EM: Round [8] log likelihood: -626997.120178 EM: Round [9] log likelihood: -626988.818114 EM: Round [10] log likelihood: -626982.765247 EM: Round [11] log likelihood: -626978.206710 EM: Round [12] log likelihood: -626974.678987 EM: Round [13] log likelihood: -626971.886165 EM: Round [14] log likelihood: -626969.632466 EM: Round [15] log likelihood: -626967.784136 EM: Round [16] log likelihood: -626966.247156 EM: Round [17] log likelihood: -626964.953760 EM: Round [18] log likelihood: -626963.854017 EM: Round [19] log likelihood: -626962.910421 EM: Round [20] log likelihood: -626962.094309 EM: Round [21] log likelihood: -626961.383439 EM: Round [22] log likelihood: -626960.760318 EM: Round [23] log likelihood: -626960.211011 EM: Round [24] log likelihood: -626959.724298 EM: Round [25] log likelihood: -626959.291049 EM: Round [26] log likelihood: -626958.903764 EM: Round [27] log likelihood: -626958.556235 EM: Round [28] log likelihood: -626958.243276 EM: Round [29] log likelihood: -626957.960528 EM: Round [30] log likelihood: -626957.704304 EM: Round [31] log likelihood: -626957.471462 EM: Round [32] log likelihood: -626957.259314 EM: Round [33] log likelihood: -626957.065546 EM: Round [34] log likelihood: -626956.888156 EM: Round [35] log likelihood: -626956.725407 EM: Round [36] log likelihood: -626956.575784 EM: Round [37] log likelihood: -626956.437961 EM: Round [38] log likelihood: -626956.310771 EM: Round [39] log likelihood: -626956.193189 EM: Round [40] log likelihood: -626956.084306 EM: Round [41] log likelihood: -626955.983318 EM: Round [42] log likelihood: -626955.889509 EM: Round [43] log likelihood: -626955.802240 EM: Round [44] log likelihood: -626955.720942 EM: Round [45] log likelihood: -626955.645104 EM: Round [46] log likelihood: -626955.574267 EM: Round [47] log likelihood: -626955.508021 EM: Round [48] log likelihood: -626955.445992 EM: Round [49] log likelihood: -626955.387846 EM: Round [50] log likelihood: -626955.333278 EM: Round [51] log likelihood: -626955.282014 EM: Round [52] log likelihood: -626955.233804 EM: Round [53] log likelihood: -626955.188421 EM: Round [54] log likelihood: -626955.145657 EM: Round [55] log likelihood: -626955.105325 EM: Round [56] log likelihood: -626955.067251 EM: Round [57] log likelihood: -626955.031278 EM: Round [58] log likelihood: -626954.997262 EM: Round [59] log likelihood: -626954.965069 EM: Round [60] log likelihood: -626954.934579 EM: Round [61] log likelihood: -626954.905679 EM: Round [62] log likelihood: -626954.878267 EM: Round [63] log likelihood: -626954.852246 EM: Round [64] log likelihood: -626954.827530 EM: Round [65] log likelihood: -626954.804037 EM: Round [66] log likelihood: -626954.781693 EM: Round [67] log likelihood: -626954.760427 EM: Round [68] log likelihood: -626954.740176 EM: Round [69] log likelihood: -626954.720879 EM: Round [70] log likelihood: -626954.702482 EM: Round [71] log likelihood: -626954.684932 EM: Round [72] log likelihood: -626954.668182 EM: Round [73] log likelihood: -626954.652187 EM: Round [74] log likelihood: -626954.636904 EM: Round [75] log likelihood: -626954.622296 EM: Round [76] log likelihood: -626954.608325 EM: Round [77] log likelihood: -626954.594957 EM: Round [78] log likelihood: -626954.582162 EM: Round [79] log likelihood: -626954.569908 EM: Round [80] log likelihood: -626954.558168 EM: Round [81] log likelihood: -626954.546916 EM: Round [82] log likelihood: -626954.536127 EM: Round [83] log likelihood: -626954.525778 EM: Round [84] log likelihood: -626954.515848 EM: Round [85] log likelihood: -626954.506315 EM: Round [86] log likelihood: -626954.497160 EM: Round [87] log likelihood: -626954.488366 EM: Round [88] log likelihood: -626954.479915 EM: Round [89] log likelihood: -626954.471791 EM: Round [90] log likelihood: -626954.463979 EM: Round [91] log likelihood: -626954.456464 EM: Round [92] log likelihood: -626954.449234 EM: Round [93] log likelihood: -626954.442274 EM: Round [94] log likelihood: -626954.435573 EM: Round [95] log likelihood: -626954.429120 EM: Round [96] log likelihood: -626954.422902 EM: Round [97] log likelihood: -626954.416911 EM: Round [98] log likelihood: -626954.411137 EM: Round [99] log likelihood: -626954.405569 EM: Round [100] log likelihood: -626954.400199 EM: Round [101] log likelihood: -626954.395019 EM: Round [102] log likelihood: -626954.390021 EM: Round [103] log likelihood: -626954.385197 EM: Round [104] log likelihood: -626954.380540 EM: Round [105] log likelihood: -626954.376044 EM: Round [106] log likelihood: -626954.371700 EM: Round [107] log likelihood: -626954.367505 EM: Round [108] log likelihood: -626954.363450 EM: Round [109] log likelihood: -626954.359532 EM: Round [110] log likelihood: -626954.355744 EM: Round [111] log likelihood: -626954.352081 EM: Round [112] log likelihood: -626954.348539 EM: Round [113] log likelihood: -626954.345112 EM: Round [114] log likelihood: -626954.341797 EM: Round [115] log likelihood: -626954.338588 EM: Round [116] log likelihood: -626954.335483 EM: Round [117] log likelihood: -626954.332477 EM: Round [118] log likelihood: -626954.329566 EM: Round [119] log likelihood: -626954.326746 EM: Round [120] log likelihood: -626954.324015 EM: Round [121] log likelihood: -626954.321370 EM: Round [122] log likelihood: -626954.318806 EM: Round [123] log likelihood: -626954.316321 EM: Round [124] log likelihood: -626954.313912 EM: Round [125] log likelihood: -626954.311576 EM: Round [126] log likelihood: -626954.309311 EM: Round [127] log likelihood: -626954.307115 EM: Round [128] log likelihood: -626954.304984 EM: Round [129] log likelihood: -626954.302916 EM: Round [130] log likelihood: -626954.300910 EM: Round [131] log likelihood: -626954.298963 EM: Round [132] log likelihood: -626954.297073 EM: Round [133] log likelihood: -626954.295238 EM: Round [134] log likelihood: -626954.293456 EM: Round [135] log likelihood: -626954.291725 EM: Round [136] log likelihood: -626954.290044 EM: Round [137] log likelihood: -626954.288410 EM: Round [138] log likelihood: -626954.286823 EM: Round [139] log likelihood: -626954.285281 EM: Round [140] log likelihood: -626954.283782 EM: Round [141] log likelihood: -626954.282324 EM: Round [142] log likelihood: -626954.280908 EM: Round [143] log likelihood: -626954.279530 EM: Round [144] log likelihood: -626954.278189 EM: Round [145] log likelihood: -626954.276886 EM: Round [146] log likelihood: -626954.275618 EM: Round [147] log likelihood: -626954.274383 EM: Round [148] log likelihood: -626954.273182 EM: Round [149] log likelihood: -626954.272013 EM: Round [150] log likelihood: -626954.270875 EM: Round [151] log likelihood: -626954.269768 EM: Round [152] log likelihood: -626954.268689 EM: Round [153] log likelihood: -626954.267638 EM: Round [154] log likelihood: -626954.266614 EM: Round [155] log likelihood: -626954.265617 EM: Round [156] log likelihood: -626954.264646 EM: Round [157] log likelihood: -626954.263699 EM: Round [158] log likelihood: -626954.262776 EM: Round [159] log likelihood: -626954.261877 EM: Round [160] log likelihood: -626954.261000 EM: Round [161] log likelihood: -626954.260145 EM: Round [162] log likelihood: -626954.259311 EM: Round [163] log likelihood: -626954.258498 EM: Round [164] log likelihood: -626954.257704 EM: Round [165] log likelihood: -626954.256930 EM: Round [166] log likelihood: -626954.256175 EM: Round [167] log likelihood: -626954.255438 EM: Round [168] log likelihood: -626954.254719 EM: Round [169] log likelihood: -626954.254016 EM: Round [170] log likelihood: -626954.253331 EM: Round [171] log likelihood: -626954.252661 EM: Round [172] log likelihood: -626954.252007 EM: Round [173] log likelihood: -626954.251369 EM: Round [174] log likelihood: -626954.250745 EM: Round [175] log likelihood: -626954.250135 EM: Round [176] log likelihood: -626954.249540 EM: Round [177] log likelihood: -626954.248958 EM: Round [178] log likelihood: -626954.248389 EM: Round [179] log likelihood: -626954.247833 EM: Round [180] log likelihood: -626954.247289 EM: Round [181] log likelihood: -626954.246757 EM: Round [182] log likelihood: -626954.246238 EM: Round [183] log likelihood: -626954.245729 EM: Round [184] log likelihood: -626954.245231 EM: Round [185] log likelihood: -626954.244745 EM: Round [186] log likelihood: -626954.244268 EM: Round [187] log likelihood: -626954.243802 EM: Round [188] log likelihood: -626954.243346 EM: Round [189] log likelihood: -626954.242900 EM: Round [190] log likelihood: -626954.242463 EM: Round [191] log likelihood: -626954.242034 EM: Round [192] log likelihood: -626954.241615 EM: Round [193] log likelihood: -626954.241205 EM: Round [194] log likelihood: -626954.240802 EM: Round [195] log likelihood: -626954.240408 EM: Round [196] log likelihood: -626954.240022 EM: Round [197] log likelihood: -626954.239644 EM: Round [198] log likelihood: -626954.239273 EM: Round [199] log likelihood: -626954.238910 EM: Round [200] log likelihood: -626954.238554 EM: Round [201] log likelihood: -626954.238204 EM: Round [202] log likelihood: -626954.237862 EM: Round [203] log likelihood: -626954.237526 EM: Round [204] log likelihood: -626954.237196 EM: Round [205] log likelihood: -626954.236873 EM: Round [206] log likelihood: -626954.236556 EM: Round [207] log likelihood: -626954.236245 EM: Round [208] log likelihood: -626954.235940 EM: Round [209] log likelihood: -626954.235640 EM: Round [210] log likelihood: -626954.235346 EM: Round [211] log likelihood: -626954.235057 EM: Round [212] log likelihood: -626954.234774 EM: Round [213] log likelihood: -626954.234495 EM: Round [214] log likelihood: -626954.234222 EM: Round [215] log likelihood: -626954.233954 EM: Round [216] log likelihood: -626954.233690 EM: Round [217] log likelihood: -626954.233431 EM: Round [218] log likelihood: -626954.233176 EM: Round [219] log likelihood: -626954.232926 EM: Round [220] log likelihood: -626954.232680 EM: Round [221] log likelihood: -626954.232439 EM: Round [222] log likelihood: -626954.232201 EM: Round [223] log likelihood: -626954.231968 EM: Round [224] log likelihood: -626954.231738 EM: Round [225] log likelihood: -626954.231512 EM: Round [226] log likelihood: -626954.231290 EM: Round [227] log likelihood: -626954.231072 EM: Round [228] log likelihood: -626954.230857 EM: Round [229] log likelihood: -626954.230646 EM: Round [230] log likelihood: -626954.230438 EM: Round [231] log likelihood: -626954.230234 EM: Round [232] log likelihood: -626954.230033 EM: Round [233] log likelihood: -626954.229835 EM: Round [234] log likelihood: -626954.229640 EM: Round [235] log likelihood: -626954.229448 EM: Round [236] log likelihood: -626954.229259 EM: Round [237] log likelihood: -626954.229073 EM: Round [238] log likelihood: -626954.228890 EM: Round [239] log likelihood: -626954.228709 EM: Round [240] log likelihood: -626954.228532 EM: Round [241] log likelihood: -626954.228357 EM: Round [242] log likelihood: -626954.228184 EM: Round [243] log likelihood: -626954.228015 EM: Round [244] log likelihood: -626954.227847 EM: Round [245] log likelihood: -626954.227683 EM: Round [246] log likelihood: -626954.227520 EM: Round [247] log likelihood: -626954.227360 EM: Round [248] log likelihood: -626954.227202 EM: Round [249] log likelihood: -626954.227047 EM: Round [250] log likelihood: -626954.226894 EM: Round [251] log likelihood: -626954.226742 EM: Round [252] log likelihood: -626954.226593 EM: Round [253] log likelihood: -626954.226447 EM: Round [254] log likelihood: -626954.226302 EM: Round [255] log likelihood: -626954.226159 EM: Round [256] log likelihood: -626954.226018 EM: Round [257] log likelihood: -626954.225879 EM: Round [258] log likelihood: -626954.225742 EM: Round [259] log likelihood: -626954.225606 EM: Round [260] log likelihood: -626954.225473 EM: Round [261] log likelihood: -626954.225341 EM: Round [262] log likelihood: -626954.225211 EM: Round [263] log likelihood: -626954.225083 EM: Round [264] log likelihood: -626954.224956 EM: Round [265] log likelihood: -626954.224832 EM: Round [266] log likelihood: -626954.224708 EM: Round [267] log likelihood: -626954.224587 EM: Round [268] log likelihood: -626954.224466 EM: Round [269] log likelihood: -626954.224348 EM: Round [270] log likelihood: -626954.224231 EM: Round [271] log likelihood: -626954.224115 EM: Round [272] log likelihood: -626954.224001 EM: Round [273] log likelihood: -626954.223888 EM: Round [274] log likelihood: -626954.223777 EM: Round [275] log likelihood: -626954.223667 EM: Round [276] log likelihood: -626954.223558 EM: Round [277] log likelihood: -626954.223451 EM: Round [278] log likelihood: -626954.223344 EM: Round [279] log likelihood: -626954.223240 EM: Round [280] log likelihood: -626954.223136 EM: Round [281] log likelihood: -626954.223034 EM: Round [282] log likelihood: -626954.222933 EM: Round [283] log likelihood: -626954.222833 EM: Stopping iterations at round 283 due to insufficient improvement in likelihood. EM: Starting log likelihood: -626581.299746 EM: Round [1] log likelihood: -625633.842666 EM: Round [2] log likelihood: -625336.533402 EM: Round [3] log likelihood: -625208.491976 EM: Round [4] log likelihood: -625143.939733 EM: Round [5] log likelihood: -625108.208609 EM: Round [6] log likelihood: -625087.047144 EM: Round [7] log likelihood: -625073.778240 EM: Round [8] log likelihood: -625065.023294 EM: Round [9] log likelihood: -625058.978849 EM: Round [10] log likelihood: -625054.637477 EM: Round [11] log likelihood: -625051.411869 EM: Round [12] log likelihood: -625048.945374 EM: Round [13] log likelihood: -625047.012919 EM: Round [14] log likelihood: -625045.467331 EM: Round [15] log likelihood: -625044.209229 EM: Round [16] log likelihood: -625043.169553 EM: Round [17] log likelihood: -625042.299085 EM: Round [18] log likelihood: -625041.561950 EM: Round [19] log likelihood: -625040.931477 EM: Round [20] log likelihood: -625040.387488 EM: Round [21] log likelihood: -625039.914469 EM: Round [22] log likelihood: -625039.500324 EM: Round [23] log likelihood: -625039.135495 EM: Round [24] log likelihood: -625038.812340 EM: Round [25] log likelihood: -625038.524681 EM: Round [26] log likelihood: -625038.267476 EM: Round [27] log likelihood: -625038.036567 EM: Round [28] log likelihood: -625037.828499 EM: Round [29] log likelihood: -625037.640377 EM: Round [30] log likelihood: -625037.469759 EM: Round [31] log likelihood: -625037.314571 EM: Round [32] log likelihood: -625037.173041 EM: Round [33] log likelihood: -625037.043643 EM: Round [34] log likelihood: -625036.925064 EM: Round [35] log likelihood: -625036.816159 EM: Round [36] log likelihood: -625036.715934 EM: Round [37] log likelihood: -625036.623518 EM: Round [38] log likelihood: -625036.538143 EM: Round [39] log likelihood: -625036.459135 EM: Round [40] log likelihood: -625036.385897 EM: Round [41] log likelihood: -625036.317898 EM: Round [42] log likelihood: -625036.254668 EM: Round [43] log likelihood: -625036.195785 EM: Round [44] log likelihood: -625036.140874 EM: Round [45] log likelihood: -625036.089597 EM: Round [46] log likelihood: -625036.041651 EM: Round [47] log likelihood: -625035.996765 EM: Round [48] log likelihood: -625035.954691 EM: Round [49] log likelihood: -625035.915208 EM: Round [50] log likelihood: -625035.878114 EM: Round [51] log likelihood: -625035.843226 EM: Round [52] log likelihood: -625035.810380 EM: Round [53] log likelihood: -625035.779424 EM: Round [54] log likelihood: -625035.750221 EM: Round [55] log likelihood: -625035.722645 EM: Round [56] log likelihood: -625035.696581 EM: Round [57] log likelihood: -625035.671925 EM: Round [58] log likelihood: -625035.648581 EM: Round [59] log likelihood: -625035.626460 EM: Round [60] log likelihood: -625035.605482 EM: Round [61] log likelihood: -625035.585571 EM: Round [62] log likelihood: -625035.566660 EM: Round [63] log likelihood: -625035.548684 EM: Round [64] log likelihood: -625035.531586 EM: Round [65] log likelihood: -625035.515311 EM: Round [66] log likelihood: -625035.499810 EM: Round [67] log likelihood: -625035.485035 EM: Round [68] log likelihood: -625035.470946 EM: Round [69] log likelihood: -625035.457500 EM: Round [70] log likelihood: -625035.444663 EM: Round [71] log likelihood: -625035.432398 EM: Round [72] log likelihood: -625035.420674 EM: Round [73] log likelihood: -625035.409462 EM: Round [74] log likelihood: -625035.398733 EM: Round [75] log likelihood: -625035.388462 EM: Round [76] log likelihood: -625035.378624 EM: Round [77] log likelihood: -625035.369196 EM: Round [78] log likelihood: -625035.360158 EM: Round [79] log likelihood: -625035.351489 EM: Round [80] log likelihood: -625035.343171 EM: Round [81] log likelihood: -625035.335186 EM: Round [82] log likelihood: -625035.327517 EM: Round [83] log likelihood: -625035.320150 EM: Round [84] log likelihood: -625035.313070 EM: Round [85] log likelihood: -625035.306263 EM: Round [86] log likelihood: -625035.299716 EM: Round [87] log likelihood: -625035.293417 EM: Round [88] log likelihood: -625035.287355 EM: Round [89] log likelihood: -625035.281519 EM: Round [90] log likelihood: -625035.275898 EM: Round [91] log likelihood: -625035.270483 EM: Round [92] log likelihood: -625035.265265 EM: Round [93] log likelihood: -625035.260235 EM: Round [94] log likelihood: -625035.255385 EM: Round [95] log likelihood: -625035.250707 EM: Round [96] log likelihood: -625035.246194 EM: Round [97] log likelihood: -625035.241839 EM: Round [98] log likelihood: -625035.237636 EM: Round [99] log likelihood: -625035.233577 EM: Round [100] log likelihood: -625035.229657 EM: Round [101] log likelihood: -625035.225871 EM: Round [102] log likelihood: -625035.222212 EM: Round [103] log likelihood: -625035.218676 EM: Round [104] log likelihood: -625035.215258 EM: Round [105] log likelihood: -625035.211953 EM: Round [106] log likelihood: -625035.208757 EM: Round [107] log likelihood: -625035.205665 EM: Round [108] log likelihood: -625035.202674 EM: Round [109] log likelihood: -625035.199780 EM: Round [110] log likelihood: -625035.196978 EM: Round [111] log likelihood: -625035.194266 EM: Round [112] log likelihood: -625035.191639 EM: Round [113] log likelihood: -625035.189096 EM: Round [114] log likelihood: -625035.186632 EM: Round [115] log likelihood: -625035.184245 EM: Round [116] log likelihood: -625035.181932 EM: Round [117] log likelihood: -625035.179690 EM: Round [118] log likelihood: -625035.177517 EM: Round [119] log likelihood: -625035.175410 EM: Round [120] log likelihood: -625035.173366 EM: Round [121] log likelihood: -625035.171385 EM: Round [122] log likelihood: -625035.169462 EM: Round [123] log likelihood: -625035.167597 EM: Round [124] log likelihood: -625035.165788 EM: Round [125] log likelihood: -625035.164031 EM: Round [126] log likelihood: -625035.162326 EM: Round [127] log likelihood: -625035.160671 EM: Round [128] log likelihood: -625035.159064 EM: Round [129] log likelihood: -625035.157503 EM: Round [130] log likelihood: -625035.155987 EM: Round [131] log likelihood: -625035.154514 EM: Round [132] log likelihood: -625035.153083 EM: Round [133] log likelihood: -625035.151693 EM: Round [134] log likelihood: -625035.150341 EM: Round [135] log likelihood: -625035.149028 EM: Round [136] log likelihood: -625035.147750 EM: Round [137] log likelihood: -625035.146509 EM: Round [138] log likelihood: -625035.145301 EM: Round [139] log likelihood: -625035.144126 EM: Round [140] log likelihood: -625035.142984 EM: Round [141] log likelihood: -625035.141872 EM: Round [142] log likelihood: -625035.140790 EM: Round [143] log likelihood: -625035.139738 EM: Round [144] log likelihood: -625035.138713 EM: Round [145] log likelihood: -625035.137715 EM: Round [146] log likelihood: -625035.136744 EM: Round [147] log likelihood: -625035.135799 EM: Round [148] log likelihood: -625035.134878 EM: Round [149] log likelihood: -625035.133980 EM: Round [150] log likelihood: -625035.133106 EM: Round [151] log likelihood: -625035.132255 EM: Round [152] log likelihood: -625035.131425 EM: Round [153] log likelihood: -625035.130617 EM: Round [154] log likelihood: -625035.129828 EM: Round [155] log likelihood: -625035.129060 EM: Round [156] log likelihood: -625035.128311 EM: Round [157] log likelihood: -625035.127580 EM: Round [158] log likelihood: -625035.126867 EM: Round [159] log likelihood: -625035.126172 EM: Round [160] log likelihood: -625035.125494 EM: Round [161] log likelihood: -625035.124833 EM: Round [162] log likelihood: -625035.124187 EM: Round [163] log likelihood: -625035.123557 EM: Round [164] log likelihood: -625035.122942 EM: Round [165] log likelihood: -625035.122342 EM: Round [166] log likelihood: -625035.121755 EM: Round [167] log likelihood: -625035.121183 EM: Round [168] log likelihood: -625035.120624 EM: Round [169] log likelihood: -625035.120078 EM: Round [170] log likelihood: -625035.119544 EM: Round [171] log likelihood: -625035.119023 EM: Round [172] log likelihood: -625035.118513 EM: Round [173] log likelihood: -625035.118015 EM: Round [174] log likelihood: -625035.117529 EM: Round [175] log likelihood: -625035.117053 EM: Round [176] log likelihood: -625035.116588 EM: Round [177] log likelihood: -625035.116133 EM: Round [178] log likelihood: -625035.115688 EM: Round [179] log likelihood: -625035.115253 EM: Round [180] log likelihood: -625035.114827 EM: Round [181] log likelihood: -625035.114410 EM: Round [182] log likelihood: -625035.114003 EM: Round [183] log likelihood: -625035.113604 EM: Round [184] log likelihood: -625035.113213 EM: Round [185] log likelihood: -625035.112831 EM: Round [186] log likelihood: -625035.112456 EM: Round [187] log likelihood: -625035.112090 EM: Round [188] log likelihood: -625035.111731 EM: Round [189] log likelihood: -625035.111379 EM: Round [190] log likelihood: -625035.111034 EM: Round [191] log likelihood: -625035.110697 EM: Round [192] log likelihood: -625035.110366 EM: Round [193] log likelihood: -625035.110042 EM: Round [194] log likelihood: -625035.109724 EM: Round [195] log likelihood: -625035.109413 EM: Round [196] log likelihood: -625035.109107 EM: Round [197] log likelihood: -625035.108808 EM: Round [198] log likelihood: -625035.108514 EM: Round [199] log likelihood: -625035.108226 EM: Round [200] log likelihood: -625035.107943 EM: Round [201] log likelihood: -625035.107666 EM: Round [202] log likelihood: -625035.107394 EM: Round [203] log likelihood: -625035.107127 EM: Round [204] log likelihood: -625035.106865 EM: Round [205] log likelihood: -625035.106608 EM: Round [206] log likelihood: -625035.106355 EM: Round [207] log likelihood: -625035.106107 EM: Round [208] log likelihood: -625035.105864 EM: Round [209] log likelihood: -625035.105625 EM: Round [210] log likelihood: -625035.105390 EM: Round [211] log likelihood: -625035.105159 EM: Round [212] log likelihood: -625035.104932 EM: Round [213] log likelihood: -625035.104709 EM: Round [214] log likelihood: -625035.104491 EM: Round [215] log likelihood: -625035.104275 EM: Round [216] log likelihood: -625035.104064 EM: Round [217] log likelihood: -625035.103856 EM: Round [218] log likelihood: -625035.103651 EM: Round [219] log likelihood: -625035.103450 EM: Round [220] log likelihood: -625035.103253 EM: Round [221] log likelihood: -625035.103058 EM: Round [222] log likelihood: -625035.102867 EM: Round [223] log likelihood: -625035.102679 EM: Round [224] log likelihood: -625035.102494 EM: Round [225] log likelihood: -625035.102311 EM: Round [226] log likelihood: -625035.102132 EM: Round [227] log likelihood: -625035.101956 EM: Round [228] log likelihood: -625035.101782 EM: Round [229] log likelihood: -625035.101611 EM: Round [230] log likelihood: -625035.101442 EM: Round [231] log likelihood: -625035.101277 EM: Round [232] log likelihood: -625035.101113 EM: Round [233] log likelihood: -625035.100952 EM: Round [234] log likelihood: -625035.100794 EM: Round [235] log likelihood: -625035.100638 EM: Round [236] log likelihood: -625035.100484 EM: Round [237] log likelihood: -625035.100333 EM: Round [238] log likelihood: -625035.100184 EM: Round [239] log likelihood: -625035.100036 EM: Round [240] log likelihood: -625035.099891 EM: Round [241] log likelihood: -625035.099749 EM: Round [242] log likelihood: -625035.099608 EM: Round [243] log likelihood: -625035.099469 EM: Round [244] log likelihood: -625035.099332 EM: Round [245] log likelihood: -625035.099197 EM: Round [246] log likelihood: -625035.099064 EM: Round [247] log likelihood: -625035.098932 EM: Round [248] log likelihood: -625035.098803 EM: Round [249] log likelihood: -625035.098675 EM: Round [250] log likelihood: -625035.098549 EM: Round [251] log likelihood: -625035.098425 EM: Round [252] log likelihood: -625035.098302 EM: Round [253] log likelihood: -625035.098181 EM: Round [254] log likelihood: -625035.098061 EM: Round [255] log likelihood: -625035.097943 EM: Round [256] log likelihood: -625035.097827 EM: Round [257] log likelihood: -625035.097712 EM: Round [258] log likelihood: -625035.097598 EM: Round [259] log likelihood: -625035.097486 EM: Round [260] log likelihood: -625035.097376 EM: Round [261] log likelihood: -625035.097267 EM: Round [262] log likelihood: -625035.097159 EM: Round [263] log likelihood: -625035.097052 EM: Round [264] log likelihood: -625035.096947 EM: Round [265] log likelihood: -625035.096843 EM: Round [266] log likelihood: -625035.096741 EM: Round [267] log likelihood: -625035.096639 EM: Round [268] log likelihood: -625035.096539 EM: Round [269] log likelihood: -625035.096440 EM: Stopping iterations at round 269 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 27607396 > /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir > /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir --annotate /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir -done, see /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 627, filtered: 6374) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.KzcTt0xLC4/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.KzcTt0xLC4/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000181577.16] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000267260.2] WARNING, no entry stored in dbm for [ENSG00000181577.16] WARNING, no entry stored in dbm for [ENSG00000127957.18] WARNING, no entry stored in dbm for [ENSG00000285835.1] WARNING, no entry stored in dbm for [ENSG00000250754.6] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000287358.1] WARNING, no entry stored in dbm for [ENSG00000180539.8] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000284613.1] WARNING, no entry stored in dbm for [ENSG00000261329.6] WARNING, no entry stored in dbm for [ENSG00000226472.8] WARNING, no entry stored in dbm for [ENSG00000260898.6] WARNING, no entry stored in dbm for [ENSG00000234420.7] WARNING, no entry stored in dbm for [ENSG00000279217.1] WARNING, no entry stored in dbm for [ENSG00000236404.10] WARNING, no entry stored in dbm for [ENSG00000232724.1] WARNING, no entry stored in dbm for [ENSG00000205791.3] WARNING, no entry stored in dbm for [ENSG00000267260.2] WARNING, no entry stored in dbm for [ENSG00000224812.3] WARNING, no entry stored in dbm for [ENSG00000279593.1] WARNING, no entry stored in dbm for [ENSG00000255136.3] WARNING, no entry stored in dbm for [ENSG00000281896.1] WARNING, no entry stored in dbm for [ENSG00000256238.1] WARNING, no entry stored in dbm for [ENSG00000256238.1] WARNING, no entry stored in dbm for [ENSG00000213842.2] WARNING, no entry stored in dbm for [ENSG00000254418.1] WARNING, no entry stored in dbm for [ENSG00000249346.7] WARNING, no entry stored in dbm for [ENSG00000259498.1] WARNING, no entry stored in dbm for [ENSG00000254231.3] WARNING, no entry stored in dbm for [ENSG00000226419.8] WARNING, no entry stored in dbm for [ENSG00000276538.1] WARNING, no entry stored in dbm for [ENSG00000248124.8] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000259577.2] WARNING, no entry stored in dbm for [ENSG00000285595.1] WARNING, no entry stored in dbm for [ENSG00000207175.1] WARNING, no entry stored in dbm for [ENSG00000268869.6] WARNING, no entry stored in dbm for [ENSG00000245694.10] WARNING, no entry stored in dbm for [ENSG00000278834.1] WARNING, no entry stored in dbm for [ENSG00000259905.7] WARNING, no entry stored in dbm for [ENSG00000224536.2] WARNING, no entry stored in dbm for [ENSG00000266208.1] WARNING, no entry stored in dbm for [ENSG00000231028.9] WARNING, no entry stored in dbm for [ENSG00000179818.14] WARNING, no entry stored in dbm for [ENSG00000283839.1] WARNING, no entry stored in dbm for [ENSG00000273129.2] WARNING, no entry stored in dbm for [ENSG00000259341.2] WARNING, no entry stored in dbm for [ENSG00000253604.1] WARNING, no entry stored in dbm for [ENSG00000231840.2] WARNING, no entry stored in dbm for [ENSG00000214820.3] WARNING, no entry stored in dbm for [ENSG00000286642.1] WARNING, no entry stored in dbm for [ENSG00000228526.7] WARNING, no entry stored in dbm for [ENSG00000253522.6] WARNING, no entry stored in dbm for [ENSG00000253522.6] WARNING, no entry stored in dbm for [ENSG00000244627.5] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000283631.1] WARNING, no entry stored in dbm for [ENSG00000227050.1] WARNING, no entry stored in dbm for [ENSG00000253553.7] WARNING, no entry stored in dbm for [ENSG00000204650.14] WARNING, no entry stored in dbm for [ENSG00000204650.14] WARNING, no entry stored in dbm for [ENSG00000278416.1] WARNING, no entry stored in dbm for [ENSG00000204650.14] WARNING, no entry stored in dbm for [ENSG00000229437.2] WARNING, no entry stored in dbm for [ENSG00000265480.5] WARNING, no entry stored in dbm for [ENSG00000265480.5] WARNING, no entry stored in dbm for [ENSG00000265480.5] WARNING, no entry stored in dbm for [ENSG00000233665.8] WARNING, no entry stored in dbm for [ENSG00000254034.2] WARNING, no entry stored in dbm for [ENSG00000244040.7] WARNING, no entry stored in dbm for [ENSG00000255733.6] WARNING, no entry stored in dbm for [ENSG00000257851.2] WARNING, no entry stored in dbm for [ENSG00000257851.2] WARNING, no entry stored in dbm for [ENSG00000131885.17] WARNING, no entry stored in dbm for [ENSG00000257851.2] WARNING, no entry stored in dbm for [ENSG00000257851.2] WARNING, no entry stored in dbm for [ENSG00000257851.2] WARNING, no entry stored in dbm for [ENSG00000237285.1] WARNING, no entry stored in dbm for [ENSG00000273888.1] WARNING, no entry stored in dbm for [ENSG00000277654.6] WARNING, no entry stored in dbm for [ENSG00000259248.7] WARNING, no entry stored in dbm for [ENSG00000287564.1] WARNING, no entry stored in dbm for [ENSG00000264578.1] WARNING, no entry stored in dbm for [ENSG00000204623.9] WARNING, no entry stored in dbm for [ENSG00000257222.1] WARNING, no entry stored in dbm for [ENSG00000267260.2] WARNING, no entry stored in dbm for [ENSG00000234840.2] WARNING, no entry stored in dbm for [ENSG00000260898.6] WARNING, no entry stored in dbm for [ENSG00000244089.1] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000278591.1] WARNING, no entry stored in dbm for [ENSG00000275219.1] WARNING, no entry stored in dbm for [ENSG00000274452.1] WARNING, no entry stored in dbm for [ENSG00000274062.1] WARNING, no entry stored in dbm for [ENSG00000274862.1] WARNING, no entry stored in dbm for [ENSG00000278774.1] WARNING, no entry stored in dbm for [ENSG00000277903.1] WARNING, no entry stored in dbm for [ENSG00000276596.1] WARNING, no entry stored in dbm for [ENSG00000278048.1] WARNING, no entry stored in dbm for [ENSG00000274432.1] WARNING, no entry stored in dbm for [ENSG00000273709.1] WARNING, no entry stored in dbm for [ENSG00000275616.1] WARNING, no entry stored in dbm for [ENSG00000222328.1] WARNING, no entry stored in dbm for [ENSG00000274585.1] WARNING, no entry stored in dbm for [ENSG00000241316.8] WARNING, no entry stored in dbm for [ENSG00000241057.2] WARNING, no entry stored in dbm for [ENSG00000259488.2] WARNING, no entry stored in dbm for [ENSG00000245080.7] WARNING, no entry stored in dbm for [ENSG00000214425.8] WARNING, no entry stored in dbm for [ENSG00000241155.1] WARNING, no entry stored in dbm for [ENSG00000266522.1] WARNING, no entry stored in dbm for [ENSG00000251143.1] WARNING, no entry stored in dbm for [ENSG00000234498.3] WARNING, no entry stored in dbm for [ENSG00000251143.1] WARNING, no entry stored in dbm for [ENSG00000226987.1] WARNING, no entry stored in dbm for [ENSG00000251049.2] WARNING, no entry stored in dbm for [ENSG00000268673.3] WARNING, no entry stored in dbm for [ENSG00000213514.2] WARNING, no entry stored in dbm for [ENSG00000287263.1] WARNING, no entry stored in dbm for [ENSG00000285799.1] WARNING, no entry stored in dbm for [ENSG00000254741.1] WARNING, no entry stored in dbm for [ENSG00000224934.5] WARNING, no entry stored in dbm for [ENSG00000223669.1] WARNING, no entry stored in dbm for [ENSG00000234961.1] WARNING, no entry stored in dbm for [ENSG00000228863.8] WARNING, no entry stored in dbm for [ENSG00000287718.1] WARNING, no entry stored in dbm for [ENSG00000287561.1] WARNING, no entry stored in dbm for [ENSG00000288044.1] WARNING, no entry stored in dbm for [ENSG00000287358.1] WARNING, no entry stored in dbm for [ENSG00000287910.1] WARNING, no entry stored in dbm for [ENSG00000275358.1] WARNING, no entry stored in dbm for [ENSG00000230725.6] WARNING, no entry stored in dbm for [ENSG00000279058.2] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000243289.1] WARNING, no entry stored in dbm for [ENSG00000261011.1] WARNING, no entry stored in dbm for [ENSG00000265018.6] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000242338.6] WARNING, no entry stored in dbm for [ENSG00000260651.1] WARNING, no entry stored in dbm for [ENSG00000276850.5] WARNING, no entry stored in dbm for [ENSG00000237638.2] WARNING, no entry stored in dbm for [ENSG00000274642.1] WARNING, no entry stored in dbm for [ENSG00000233396.8] WARNING, no entry stored in dbm for [ENSG00000285184.3] WARNING, no entry stored in dbm for [ENSG00000203825.4] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000235126.1] WARNING, no entry stored in dbm for [ENSG00000270055.1] WARNING, no entry stored in dbm for [ENSG00000228794.10] WARNING, no entry stored in dbm for [ENSG00000277511.1] WARNING, no entry stored in dbm for [ENSG00000272763.1] WARNING, no entry stored in dbm for [ENSG00000232760.1] WARNING, no entry stored in dbm for [ENSG00000273230.1] WARNING, no entry stored in dbm for [ENSG00000287676.1] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000264151.6] WARNING, no entry stored in dbm for [ENSG00000264578.1] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000273391.1] WARNING, no entry stored in dbm for [ENSG00000235140.2] WARNING, no entry stored in dbm for [ENSG00000279569.1] WARNING, no entry stored in dbm for [ENSG00000225937.3] WARNING, no entry stored in dbm for [ENSG00000279569.1] WARNING, no entry stored in dbm for [ENSG00000286030.2] WARNING, no entry stored in dbm for [ENSG00000197813.6] WARNING, no entry stored in dbm for [ENSG00000229689.3] WARNING, no entry stored in dbm for [ENSG00000238045.9] WARNING, no entry stored in dbm for [ENSG00000260905.1] WARNING, no entry stored in dbm for [ENSG00000276548.1] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000286220.1] WARNING, no entry stored in dbm for [ENSG00000272568.6] WARNING, no entry stored in dbm for [ENSG00000250132.6] * STAR-Fusion complete. See output: /tmp/nxf.KzcTt0xLC4/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)