Done.
-parsing GTF file: /tmp/nxf.YrOfHpI81T/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.gtf
* Running CMD: /usr/local/bin/STAR  --runThreadN 8  --genomeDir /tmp/nxf.YrOfHpI81T/ctat_genome_lib_build_dir/ref_genome.fa.star.idx  --outSAMtype BAM SortedByCoordinate  --twopassMode None  --alignSJDBoverhangMin 10  --genomeSuffixLengthMax 10000 --limitBAMsortRAM 47271261705  --alignInsertionFlush Right   --alignMatesGapMax 100000  --alignIntronMax 100000  --outSAMattributes All  --readFilesIn /tmp/nxf.YrOfHpI81T/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1_1.fastp.fastq.gz /tmp/nxf.YrOfHpI81T/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1_2.fastp.fastq.gz  --genomeFastaFiles /tmp/nxf.YrOfHpI81T/fi_workdir/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.fa  --outSAMfilter KeepAllAddedReferences  --sjdbGTFfile /tmp/nxf.YrOfHpI81T/fi_workdir/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.gtf  --alignSJstitchMismatchNmax 5 -1 5 5  --scoreGapNoncan -6  --readFilesCommand 'gunzip -c' 
* Running CMD: mv Aligned.sortedByCoord.out.bam 1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.star.sortedByCoord.out.bam
* Running CMD: samtools index 1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.star.sortedByCoord.out.bam
10:43:29 : INFO : Done.
-parsing GTF file: /tmp/nxf.YrOfHpI81T/fi_workdir/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.gtf
-parsing /tmp/nxf.YrOfHpI81T/fi_workdir/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.star.cSorted.dupsMarked.bam

[10000]   
[20000]   
[30000]   
[40000]   
[50000]   
[60000]   
[70000]   
[80000]   
[90000]   
[100000]   
[110000]   
[120000]   
[130000]   
[140000]   
[150000]   
[160000]   
[170000]   
[180000]   
[190000]   
[200000]   
[210000]   
[220000]   
[230000]   
[240000]   
[250000]   
[260000]   
[270000]   
[280000]   
[290000]   
[300000]   
[310000]   
[320000]   
[330000]   
[340000]   
[350000]   
[360000]   
[370000]   
[380000]   
[390000]   
[400000]   
[410000]   
[420000]   
[430000]   
[440000]   
[450000]   
[460000]   
[470000]   
[480000]   
[490000]   
[500000]   
[510000]   
[520000]   
[530000]   
[540000]   
[550000]   
[560000]   
[570000]   
[580000]   
[590000]   
[600000]   
[610000]   
[620000]   
[630000]   
[640000]   
[650000]   
[660000]   
[670000]   
[680000]   
[690000]   
[700000]   
[710000]   
[720000]   
[730000]   
[740000]   
[750000]   
[760000]   
[770000]   
[780000]   
[790000]   
[800000]   
[810000]   
[820000]   
[830000]   
[840000]   
[850000]   
[860000]   
[870000]   
[880000]   
[890000]   
[900000]   
[910000]   
[920000]   
[930000]   
[940000]   
[950000]   
[960000]   
[970000]   
[980000]   
[990000]   
[1000000]   
[1010000]   
[1020000]   
[1030000]   
[1040000]   
[1050000]   
[1060000]   
[1070000]   
[1080000]   
[1090000]   
[1100000]   
[1110000]   
[1120000]   
[1130000]   
[1140000]   
[1150000]   
[1160000]   
[1170000]   
[1180000]   
[1190000]   
[1200000]   
[1210000]   
[1220000]   
[1230000]   
[1240000]   
[1250000]   
[1260000]   
[1270000]   
[1280000]   
[1290000]   
[1300000]   
[1310000]   
[1320000]   
[1330000]   
[1340000]   
[1350000]   
[1360000]   
[1370000]   
[1380000]   
[1390000]   
[1400000]   
[1410000]   
[1420000]   
[1430000]   
[1440000]   
[1450000]   
[1460000]   
[1470000]   
[1480000]   
[1490000]   
[1500000]   
[1510000]   
[1520000]   
[1530000]   
[1540000]   
[1550000]   
[1560000]   
[1570000]   
[1580000]   
[1590000]   
[1600000]   
[1610000]   
[1620000]   
[1630000]   
[1640000]   
[1650000]   
[1660000]   
[1670000]   
[1680000]   
[1690000]   
[1700000]   
[1710000]   
[1720000]   
[1730000]   
[1740000]   
[1750000]   
[1760000]   
[1770000]   
[1780000]   
[1790000]   
[1800000]   
[1810000]   
[1820000]   
[1830000]   
[1840000]   
[1850000]   
[1860000]   
[1870000]   
[1880000]   
[1890000]   
[1900000]   
[1910000]   
[1920000]   
[1930000]   
[1940000]   
[1950000]   
[1960000]   
[1970000]   
[1980000]   
[1990000]   
[2000000]   
[2010000]   
[2020000]   
[2030000]   
[2040000]   
[2050000]   
[2060000]   
[2070000]   
[2080000]   
[2090000]   
[2100000]   
[2110000]   
[2120000]   
[2130000]   
[2140000]   
[2150000]   
[2160000]   
[2170000]   
[2180000]   
[2190000]   
[2200000]   
[2210000]   
[2220000]   
[2230000]   
[2240000]   
[2250000]   
[2260000]   
[2270000]   
[2280000]   
[2290000]   
[2300000]   
[2310000]   
[2320000]   
[2330000]   
[2340000]   
[2350000]   
[2360000]   
[2370000]   
[2380000]   
[2390000]   
[2400000]   
[2410000]   
[2420000]   
[2430000]   
[2440000]   
[2450000]   
[2460000]   
[2470000]   
[2480000]   
[2490000]   
[2500000]   
[2510000]   
[2520000]   
[2530000]   
[2540000]   
[2550000]   
[2560000]   
[2570000]   
[2580000]   
[2590000]   
[2600000]   
[2610000]   
[2620000]   
[2630000]   
[2640000]   
[2650000]   
[2660000]   
[2670000]   
[2680000]   
[2690000]   
[2700000]   
[2710000]   
[2720000]   
[2730000]   
[2740000]   
[2750000]   
[2760000]   
[2770000]   
[2780000]   
[2790000]   
[2800000]   
[2810000]   
[2820000]   
[2830000]   
[2840000]   
[2850000]   
[2860000]   
[2870000]   
[2880000]   -done parsing /tmp/nxf.YrOfHpI81T/fi_workdir/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.star.cSorted.dupsMarked.bam.  Extracting junction info.
junction read elimination tally: $VAR1 = {
          'per_id < 96' => 9365,
          'num_hits: 6 != num_counted_on_fusion_contigs 4 ' => 4,
          'exons hit < 2' => 7,
          'num genes matched < 2' => 14,
          'num_hits: 2 != num_counted_on_fusion_contigs 1 ' => 23,
          'num_hits: 4 != num_counted_on_fusion_contigs 1 ' => 1,
          'num_hits: 4 != num_counted_on_fusion_contigs 2 ' => 4,
          'num_hits: 6 != num_counted_on_fusion_contigs 3 ' => 15,
          'num_hits: 3 != num_counted_on_fusion_contigs 1 ' => 394,
          'small anchor length' => 78,
          'num_hits: 5 != num_counted_on_fusion_contigs 3 ' => 18,
          'low complexity anchor region' => 6,
          'num_hits: 3 != num_counted_on_fusion_contigs 2 ' => 22,
          'seq-similar region overlap' => 548,
          'excessive soft clipping' => 9435,
          'num_hits: 7 != num_counted_on_fusion_contigs 3 ' => 12,
          ' ** passed ** ' => 11820
        };
-writing fusion junction support info.
-outputting the spanning read info: /tmp/nxf.YrOfHpI81T/fi_workdir/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.star.cSorted.dupsMarked.bam.fusion_spanning_info.
 - counting read alignments among fusion contigs.

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   -fusion SPANNING read extraction for scaff: C1QTNF3--AMACR

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   
[57000]   -fusion SPANNING read extraction for scaff: CELF4--TPGS2

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   -fusion SPANNING read extraction for scaff: GOLGA6L10--GOLGA2P6

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   -fusion SPANNING read extraction for scaff: GUSBP13--NAIP

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   -fusion SPANNING read extraction for scaff: PCDHA10--PCDHAC2

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   
[57000]   -fusion SPANNING read extraction for scaff: PCDHA10--PCDHAC1

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   
[57000]   
[58000]   
[59000]   -fusion SPANNING read extraction for scaff: PCDHA10--PCDHA13

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   
[57000]   
[58000]   
[59000]   
[60000]   
[61000]   
[62000]   
[63000]   
[64000]   
[65000]   
[66000]   
[67000]   
[68000]   -fusion SPANNING read extraction for scaff: PCDHA8--PCDHA13

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   
[57000]   
[58000]   
[59000]   
[60000]   
[61000]   
[62000]   
[63000]   
[64000]   
[65000]   
[66000]   -fusion SPANNING read extraction for scaff: PCDHA8--PCDHAC1

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   
[57000]   
[58000]   
[59000]   
[60000]   -fusion SPANNING read extraction for scaff: PCDHA8--PCDHAC2

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   
[57000]   
[58000]   
[59000]   
[60000]   
[61000]   
[62000]   
[63000]   
[64000]   
[65000]   
[66000]   
[67000]   
[68000]   
[69000]   
[70000]   
[71000]   
[72000]   
[73000]   
[74000]   
[75000]   
[76000]   
[77000]   
[78000]   
[79000]   
[80000]   
[81000]   
[82000]   
[83000]   
[84000]   
[85000]   
[86000]   
[87000]   
[88000]   
[89000]   
[90000]   
[91000]   
[92000]   
[93000]   
[94000]   -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGA8

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGA9

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGB6

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGA10

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGB7

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   
[57000]   
[58000]   
[59000]   
[60000]   
[61000]   -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGA11

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGA12

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGC3

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGC4

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGC5

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGC4

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGC5

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGC3

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   
[57000]   
[58000]   
[59000]   
[60000]   
[61000]   
[62000]   
[63000]   
[64000]   
[65000]   
[66000]   
[67000]   
[68000]   
[69000]   
[70000]   
[71000]   
[72000]   
[73000]   
[74000]   
[75000]   
[76000]   
[77000]   
[78000]   
[79000]   
[80000]   
[81000]   
[82000]   
[83000]   
[84000]   
[85000]   
[86000]   
[87000]   
[88000]   
[89000]   
[90000]   
[91000]   
[92000]   
[93000]   
[94000]   -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGA8

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGB6

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGB7

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGA10

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   
[57000]   
[58000]   
[59000]   
[60000]   
[61000]   -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGA11

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGA9

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGA12

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   
[57000]   
[58000]   
[59000]   
[60000]   
[61000]   
[62000]   
[63000]   
[64000]   
[65000]   
[66000]   
[67000]   
[68000]   
[69000]   
[70000]   
[71000]   
[72000]   
[73000]   
[74000]   
[75000]   
[76000]   
[77000]   
[78000]   
[79000]   
[80000]   
[81000]   
[82000]   
[83000]   
[84000]   
[85000]   
[86000]   
[87000]   
[88000]   
[89000]   
[90000]   
[91000]   
[92000]   
[93000]   
[94000]   -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA8

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA9

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGB6

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA10

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGB7

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   
[57000]   
[58000]   
[59000]   
[60000]   
[61000]   -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA11

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA12

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGC3

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGC4

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGC5

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   
[57000]   
[58000]   
[59000]   
[60000]   
[61000]   
[62000]   
[63000]   
[64000]   
[65000]   
[66000]   
[67000]   
[68000]   
[69000]   
[70000]   
[71000]   
[72000]   
[73000]   
[74000]   
[75000]   
[76000]   
[77000]   
[78000]   
[79000]   
[80000]   
[81000]   
[82000]   
[83000]   
[84000]   
[85000]   
[86000]   
[87000]   
[88000]   
[89000]   
[90000]   
[91000]   
[92000]   
[93000]   
[94000]   
[95000]   
[96000]   
[97000]   
[98000]   
[99000]   
[100000]   
[101000]   
[102000]   
[103000]   
[104000]   
[105000]   
[106000]   
[107000]   
[108000]   
[109000]   
[110000]   
[111000]   
[112000]   
[113000]   
[114000]   
[115000]   
[116000]   
[117000]   
[118000]   
[119000]   
[120000]   
[121000]   
[122000]   
[123000]   
[124000]   
[125000]   
[126000]   
[127000]   
[128000]   
[129000]   
[130000]   
[131000]   
[132000]   
[133000]   
[134000]   
[135000]   
[136000]   
[137000]   
[138000]   
[139000]   
[140000]   
[141000]   
[142000]   
[143000]   
[144000]   
[145000]   
[146000]   
[147000]   
[148000]   
[149000]   
[150000]   
[151000]   
[152000]   
[153000]   
[154000]   
[155000]   
[156000]   
[157000]   
[158000]   
[159000]   
[160000]   
[161000]   
[162000]   
[163000]   
[164000]   
[165000]   
[166000]   
[167000]   
[168000]   
[169000]   
[170000]   
[171000]   
[172000]   
[173000]   
[174000]   
[175000]   
[176000]   
[177000]   
[178000]   
[179000]   
[180000]   
[181000]   
[182000]   
[183000]   
[184000]   
[185000]   
[186000]   
[187000]   
[188000]   
[189000]   
[190000]   
[191000]   
[192000]   
[193000]   
[194000]   
[195000]   
[196000]   
[197000]   
[198000]   
[199000]   
[200000]   
[201000]   
[202000]   
[203000]   
[204000]   
[205000]   
[206000]   
[207000]   
[208000]   
[209000]   
[210000]   
[211000]   
[212000]   
[213000]   
[214000]   
[215000]   
[216000]   
[217000]   
[218000]   
[219000]   
[220000]   
[221000]   
[222000]   
[223000]   
[224000]   
[225000]   
[226000]   
[227000]   
[228000]   
[229000]   
[230000]   
[231000]   
[232000]   
[233000]   
[234000]   
[235000]   
[236000]   
[237000]   
[238000]   
[239000]   
[240000]   
[241000]   
[242000]   
[243000]   
[244000]   
[245000]   
[246000]   
[247000]   
[248000]   
[249000]   
[250000]   
[251000]   
[252000]   
[253000]   
[254000]   
[255000]   
[256000]   
[257000]   
[258000]   
[259000]   
[260000]   
[261000]   
[262000]   
[263000]   
[264000]   
[265000]   
[266000]   
[267000]   
[268000]   
[269000]   
[270000]   
[271000]   
[272000]   
[273000]   
[274000]   
[275000]   
[276000]   
[277000]   
[278000]   
[279000]   
[280000]   
[281000]   
[282000]   
[283000]   
[284000]   
[285000]   
[286000]   
[287000]   
[288000]   
[289000]   
[290000]   
[291000]   
[292000]   
[293000]   -fusion SPANNING read extraction for scaff: PRPH--TUBA1C

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   
[57000]   
[58000]   
[59000]   
[60000]   
[61000]   
[62000]   
[63000]   
[64000]   
[65000]   
[66000]   
[67000]   
[68000]   
[69000]   
[70000]   
[71000]   
[72000]   
[73000]   
[74000]   
[75000]   
[76000]   
[77000]   
[78000]   
[79000]   
[80000]   
[81000]   
[82000]   
[83000]   
[84000]   
[85000]   
[86000]   
[87000]   -fusion SPANNING read extraction for scaff: PRPH--AC125611.4

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   -fusion SPANNING read extraction for scaff: PSMD14--EXOC6B

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   -fusion SPANNING read extraction for scaff: STX16--NPEPL1

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   -fusion SPANNING read extraction for scaff: SYNM--AL691515.1

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   -fusion SPANNING read extraction for scaff: TAB1--XPNPEP3

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   -fusion SPANNING read extraction for scaff: TLK2P1--AC110079.1

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   
[57000]   
[58000]   
[59000]   
[60000]   
[61000]   
[62000]   
[63000]   
[64000]   
[65000]   
[66000]   
[67000]   
[68000]   
[69000]   
[70000]   
[71000]   -fusion SPANNING read extraction for scaff: TTC28--MN1

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   
[57000]   
[58000]   
[59000]   
[60000]   
[61000]   
[62000]   
[63000]   
[64000]   
[65000]   
[66000]   
[67000]   
[68000]   
[69000]   
[70000]   
[71000]   
[72000]   
[73000]   
[74000]   
[75000]   
[76000]   
[77000]   
[78000]   
[79000]   
[80000]   
[81000]   
[82000]   
[83000]   
[84000]   
[85000]   
[86000]   
[87000]   
[88000]   
[89000]   
[90000]   
[91000]   
[92000]   
[93000]   
[94000]   
[95000]   
[96000]   
[97000]   
[98000]   
[99000]   
[100000]   
[101000]   
[102000]   
[103000]   
[104000]   
[105000]   
[106000]   
[107000]   
[108000]   
[109000]   
[110000]   
[111000]   
[112000]   
[113000]   
[114000]   
[115000]   
[116000]   
[117000]   
[118000]   
[119000]   
[120000]   
[121000]   
[122000]   
[123000]   
[124000]   
[125000]   
[126000]   
[127000]   
[128000]   
[129000]   
[130000]   
[131000]   
[132000]   
[133000]   
[134000]   
[135000]   
[136000]   
[137000]   
[138000]   
[139000]   
[140000]   
[141000]   
[142000]   
[143000]   
[144000]   
[145000]   
[146000]   
[147000]   
[148000]   
[149000]   
[150000]   
[151000]   
[152000]   
[153000]   
[154000]   
[155000]   
[156000]   
[157000]   
[158000]   
[159000]   
[160000]   
[161000]   
[162000]   
[163000]   
[164000]   
[165000]   
[166000]   
[167000]   -fusion SPANNING read extraction for scaff: ZNF638--TTC21B-AS1

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
[12000]   
[13000]   
[14000]   
[15000]   
[16000]   
[17000]   
[18000]   
[19000]   
[20000]   
[21000]   
[22000]   
[23000]   
[24000]   
[25000]   
[26000]   
[27000]   
[28000]   
[29000]   
[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   
[42000]   
[43000]   
[44000]   
[45000]   
[46000]   
[47000]   
[48000]   
[49000]   
[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   
[57000]   
[58000]   
[59000]   
[60000]   
[61000]   
[62000]   
[63000]   
[64000]   
[65000]   
[66000]   
[67000]   
[68000]   
[69000]   
[70000]   
[71000]   
[72000]   
[73000]   
[74000]   
[75000]   
[76000]   
[77000]   
[78000]   
[79000]   
[80000]   
[81000]   
[82000]   
[83000]   
[84000]   
[85000]   
[86000]   
[87000]   
[88000]   
[89000]   
[90000]   
[91000]   
[92000]   
[93000]   
[94000]   
[95000]   
[96000]   
[97000]   
[98000]   
[99000]   
[100000]   
[101000]   
[102000]   
[103000]   
[104000]   
[105000]   
[106000]   
[107000]   
[108000]   
[109000]   
[110000]   
[111000]   
[112000]   
[113000]   
[114000]   
[115000]   
[116000]   
[117000]   
[118000]   
[119000]   
[120000]   
[121000]   
[122000]   
[123000]   
[124000]   
[125000]   
[126000]   
[127000]   
[128000]   
[129000]   
[130000]   
[131000]   
[132000]   
[133000]   
[134000]   
[135000]   
[136000]   
[137000]   
[138000]   
[139000]   
[140000]   
[141000]   
[142000]   
[143000]   
[144000]   
[145000]   
[146000]   
[147000]   
[148000]   
[149000]   
[150000]   
[151000]   
[152000]   
[153000]   
[154000]   
[155000]   
[156000]   
[157000]   
[158000]   
[159000]   
[160000]   
[161000]   
[162000]   
[163000]   
[164000]   
[165000]   
[166000]   
[167000]   
[168000]   
[169000]   
[170000]   
[171000]   
[172000]   
[173000]   
[174000]   
[175000]   
[176000]   
[177000]   
[178000]   
[179000]   
[180000]   
[181000]   
[182000]   
[183000]   
[184000]   
[185000]   
[186000]   
[187000]   
[188000]   
[189000]   
[190000]   
[191000]   
[192000]   
[193000]   
[194000]   
[195000]   
[196000]   
[197000]   
[198000]   
[199000]   
[200000]   
[201000]   
[202000]   
[203000]   
[204000]   
[205000]   
[206000]   -fusion SPANNING read extraction for scaff: ZNF638--TTC21B
-filtered reads reasons: $VAR1 = {
          'lacks exon overlap' => 12694,
          'seq similar region alignment' => 242443
        };
EM: Starting log likelihood: -4051.109390
EM: Round [1] log likelihood: -4050.658178
EM: Round [2] log likelihood: -4050.329496
EM: Round [3] log likelihood: -4050.032132
EM: Round [4] log likelihood: -4049.761974
EM: Round [5] log likelihood: -4049.515558
EM: Round [6] log likelihood: -4049.289916
EM: Round [7] log likelihood: -4049.082498
EM: Round [8] log likelihood: -4048.891104
EM: Round [9] log likelihood: -4048.713834
EM: Round [10] log likelihood: -4048.549036
EM: Round [11] log likelihood: -4048.395280
EM: Round [12] log likelihood: -4048.251317
EM: Round [13] log likelihood: -4048.116062
EM: Round [14] log likelihood: -4047.988562
EM: Round [15] log likelihood: -4047.867989
EM: Round [16] log likelihood: -4047.753614
EM: Round [17] log likelihood: -4047.644799
EM: Round [18] log likelihood: -4047.540986
EM: Round [19] log likelihood: -4047.441681
EM: Round [20] log likelihood: -4047.346454
EM: Round [21] log likelihood: -4047.254922
EM: Round [22] log likelihood: -4047.166751
EM: Round [23] log likelihood: -4047.081646
EM: Round [24] log likelihood: -4046.999345
EM: Round [25] log likelihood: -4046.919617
EM: Round [26] log likelihood: -4046.842260
EM: Round [27] log likelihood: -4046.767093
EM: Round [28] log likelihood: -4046.693957
EM: Round [29] log likelihood: -4046.622710
EM: Round [30] log likelihood: -4046.553226
EM: Round [31] log likelihood: -4046.485394
EM: Round [32] log likelihood: -4046.419115
EM: Round [33] log likelihood: -4046.354300
EM: Round [34] log likelihood: -4046.290870
EM: Round [35] log likelihood: -4046.228754
EM: Round [36] log likelihood: -4046.167890
EM: Round [37] log likelihood: -4046.108220
EM: Round [38] log likelihood: -4046.049694
EM: Round [39] log likelihood: -4045.992265
EM: Round [40] log likelihood: -4045.935892
EM: Round [41] log likelihood: -4045.880537
EM: Round [42] log likelihood: -4045.826165
EM: Round [43] log likelihood: -4045.772746
EM: Round [44] log likelihood: -4045.720251
EM: Round [45] log likelihood: -4045.668653
EM: Round [46] log likelihood: -4045.617928
EM: Round [47] log likelihood: -4045.568054
EM: Round [48] log likelihood: -4045.519010
EM: Round [49] log likelihood: -4045.470776
EM: Round [50] log likelihood: -4045.423335
EM: Round [51] log likelihood: -4045.376668
EM: Round [52] log likelihood: -4045.330761
EM: Round [53] log likelihood: -4045.285597
EM: Round [54] log likelihood: -4045.241163
EM: Round [55] log likelihood: -4045.197444
EM: Round [56] log likelihood: -4045.154427
EM: Round [57] log likelihood: -4045.112100
EM: Round [58] log likelihood: -4045.070450
EM: Round [59] log likelihood: -4045.029465
EM: Round [60] log likelihood: -4044.989135
EM: Round [61] log likelihood: -4044.949447
EM: Round [62] log likelihood: -4044.910391
EM: Round [63] log likelihood: -4044.871957
EM: Round [64] log likelihood: -4044.834135
EM: Round [65] log likelihood: -4044.796913
EM: Round [66] log likelihood: -4044.760283
EM: Round [67] log likelihood: -4044.724236
EM: Round [68] log likelihood: -4044.688760
EM: Round [69] log likelihood: -4044.653848
EM: Round [70] log likelihood: -4044.619490
EM: Round [71] log likelihood: -4044.585678
EM: Round [72] log likelihood: -4044.552401
EM: Round [73] log likelihood: -4044.519653
EM: Round [74] log likelihood: -4044.487424
EM: Round [75] log likelihood: -4044.455705
EM: Round [76] log likelihood: -4044.424489
EM: Round [77] log likelihood: -4044.393767
EM: Round [78] log likelihood: -4044.363531
EM: Round [79] log likelihood: -4044.333774
EM: Round [80] log likelihood: -4044.304487
EM: Round [81] log likelihood: -4044.275663
EM: Round [82] log likelihood: -4044.247294
EM: Round [83] log likelihood: -4044.219372
EM: Round [84] log likelihood: -4044.191891
EM: Round [85] log likelihood: -4044.164842
EM: Round [86] log likelihood: -4044.138219
EM: Round [87] log likelihood: -4044.112015
EM: Round [88] log likelihood: -4044.086222
EM: Round [89] log likelihood: -4044.060833
EM: Round [90] log likelihood: -4044.035843
EM: Round [91] log likelihood: -4044.011243
EM: Round [92] log likelihood: -4043.987028
EM: Round [93] log likelihood: -4043.963191
EM: Round [94] log likelihood: -4043.939725
EM: Round [95] log likelihood: -4043.916624
EM: Round [96] log likelihood: -4043.893883
EM: Round [97] log likelihood: -4043.871494
EM: Round [98] log likelihood: -4043.849452
EM: Round [99] log likelihood: -4043.827751
EM: Round [100] log likelihood: -4043.806385
EM: Round [101] log likelihood: -4043.785348
EM: Round [102] log likelihood: -4043.764634
EM: Round [103] log likelihood: -4043.744239
EM: Round [104] log likelihood: -4043.724156
EM: Round [105] log likelihood: -4043.704381
EM: Round [106] log likelihood: -4043.684907
EM: Round [107] log likelihood: -4043.665729
EM: Round [108] log likelihood: -4043.646844
EM: Round [109] log likelihood: -4043.628244
EM: Round [110] log likelihood: -4043.609926
EM: Round [111] log likelihood: -4043.591885
EM: Round [112] log likelihood: -4043.574115
EM: Round [113] log likelihood: -4043.556613
EM: Round [114] log likelihood: -4043.539373
EM: Round [115] log likelihood: -4043.522391
EM: Round [116] log likelihood: -4043.505662
EM: Round [117] log likelihood: -4043.489183
EM: Round [118] log likelihood: -4043.472948
EM: Round [119] log likelihood: -4043.456954
EM: Round [120] log likelihood: -4043.441196
EM: Round [121] log likelihood: -4043.425670
EM: Round [122] log likelihood: -4043.410373
EM: Round [123] log likelihood: -4043.395300
EM: Round [124] log likelihood: -4043.380447
EM: Round [125] log likelihood: -4043.365811
EM: Round [126] log likelihood: -4043.351388
EM: Round [127] log likelihood: -4043.337174
EM: Round [128] log likelihood: -4043.323166
EM: Round [129] log likelihood: -4043.309360
EM: Round [130] log likelihood: -4043.295753
EM: Round [131] log likelihood: -4043.282341
EM: Round [132] log likelihood: -4043.269121
EM: Round [133] log likelihood: -4043.256090
EM: Round [134] log likelihood: -4043.243244
EM: Round [135] log likelihood: -4043.230580
EM: Round [136] log likelihood: -4043.218095
EM: Round [137] log likelihood: -4043.205787
EM: Round [138] log likelihood: -4043.193652
EM: Round [139] log likelihood: -4043.181687
EM: Round [140] log likelihood: -4043.169889
EM: Round [141] log likelihood: -4043.158256
EM: Round [142] log likelihood: -4043.146785
EM: Round [143] log likelihood: -4043.135472
EM: Round [144] log likelihood: -4043.124316
EM: Round [145] log likelihood: -4043.113314
EM: Round [146] log likelihood: -4043.102463
EM: Round [147] log likelihood: -4043.091761
EM: Round [148] log likelihood: -4043.081205
EM: Round [149] log likelihood: -4043.070792
EM: Round [150] log likelihood: -4043.060521
EM: Round [151] log likelihood: -4043.050390
EM: Round [152] log likelihood: -4043.040394
EM: Round [153] log likelihood: -4043.030534
EM: Round [154] log likelihood: -4043.020806
EM: Round [155] log likelihood: -4043.011207
EM: Round [156] log likelihood: -4043.001737
EM: Round [157] log likelihood: -4042.992393
EM: Round [158] log likelihood: -4042.983173
EM: Round [159] log likelihood: -4042.974074
EM: Round [160] log likelihood: -4042.965096
EM: Round [161] log likelihood: -4042.956235
EM: Round [162] log likelihood: -4042.947491
EM: Round [163] log likelihood: -4042.938861
EM: Round [164] log likelihood: -4042.930343
EM: Round [165] log likelihood: -4042.921935
EM: Round [166] log likelihood: -4042.913637
EM: Round [167] log likelihood: -4042.905446
EM: Round [168] log likelihood: -4042.897360
EM: Round [169] log likelihood: -4042.889377
EM: Round [170] log likelihood: -4042.881497
EM: Round [171] log likelihood: -4042.873717
EM: Round [172] log likelihood: -4042.866037
EM: Round [173] log likelihood: -4042.858453
EM: Round [174] log likelihood: -4042.850966
EM: Round [175] log likelihood: -4042.843573
EM: Round [176] log likelihood: -4042.836272
EM: Round [177] log likelihood: -4042.829063
EM: Round [178] log likelihood: -4042.821945
EM: Round [179] log likelihood: -4042.814914
EM: Round [180] log likelihood: -4042.807972
EM: Round [181] log likelihood: -4042.801115
EM: Round [182] log likelihood: -4042.794343
EM: Round [183] log likelihood: -4042.787654
EM: Round [184] log likelihood: -4042.781047
EM: Round [185] log likelihood: -4042.774521
EM: Round [186] log likelihood: -4042.768075
EM: Round [187] log likelihood: -4042.761707
EM: Round [188] log likelihood: -4042.755417
EM: Round [189] log likelihood: -4042.749203
EM: Round [190] log likelihood: -4042.743063
EM: Round [191] log likelihood: -4042.736998
EM: Round [192] log likelihood: -4042.731005
EM: Round [193] log likelihood: -4042.725084
EM: Round [194] log likelihood: -4042.719234
EM: Round [195] log likelihood: -4042.713454
EM: Round [196] log likelihood: -4042.707742
EM: Round [197] log likelihood: -4042.702097
EM: Round [198] log likelihood: -4042.696519
EM: Round [199] log likelihood: -4042.691007
EM: Round [200] log likelihood: -4042.685560
EM: Round [201] log likelihood: -4042.680176
EM: Round [202] log likelihood: -4042.674855
EM: Round [203] log likelihood: -4042.669597
EM: Round [204] log likelihood: -4042.664399
EM: Round [205] log likelihood: -4042.659261
EM: Round [206] log likelihood: -4042.654183
EM: Round [207] log likelihood: -4042.649163
EM: Round [208] log likelihood: -4042.644201
EM: Round [209] log likelihood: -4042.639296
EM: Round [210] log likelihood: -4042.634447
EM: Round [211] log likelihood: -4042.629653
EM: Round [212] log likelihood: -4042.624914
EM: Round [213] log likelihood: -4042.620229
EM: Round [214] log likelihood: -4042.615596
EM: Round [215] log likelihood: -4042.611016
EM: Round [216] log likelihood: -4042.606488
EM: Round [217] log likelihood: -4042.602010
EM: Round [218] log likelihood: -4042.597583
EM: Round [219] log likelihood: -4042.593205
EM: Round [220] log likelihood: -4042.588875
EM: Round [221] log likelihood: -4042.584594
EM: Round [222] log likelihood: -4042.580361
EM: Round [223] log likelihood: -4042.576174
EM: Round [224] log likelihood: -4042.572034
EM: Round [225] log likelihood: -4042.567939
EM: Round [226] log likelihood: -4042.563889
EM: Round [227] log likelihood: -4042.559883
EM: Round [228] log likelihood: -4042.555922
EM: Round [229] log likelihood: -4042.552003
EM: Round [230] log likelihood: -4042.548128
EM: Round [231] log likelihood: -4042.544294
EM: Round [232] log likelihood: -4042.540502
EM: Round [233] log likelihood: -4042.536751
EM: Round [234] log likelihood: -4042.533040
EM: Round [235] log likelihood: -4042.529370
EM: Round [236] log likelihood: -4042.525738
EM: Round [237] log likelihood: -4042.522146
EM: Round [238] log likelihood: -4042.518592
EM: Round [239] log likelihood: -4042.515076
EM: Round [240] log likelihood: -4042.511598
EM: Round [241] log likelihood: -4042.508156
EM: Round [242] log likelihood: -4042.504751
EM: Round [243] log likelihood: -4042.501382
EM: Round [244] log likelihood: -4042.498049
EM: Round [245] log likelihood: -4042.494750
EM: Round [246] log likelihood: -4042.491486
EM: Round [247] log likelihood: -4042.488257
EM: Round [248] log likelihood: -4042.485061
EM: Round [249] log likelihood: -4042.481899
EM: Round [250] log likelihood: -4042.478770
EM: Round [251] log likelihood: -4042.475673
EM: Round [252] log likelihood: -4042.472608
EM: Round [253] log likelihood: -4042.469576
EM: Round [254] log likelihood: -4042.466574
EM: Round [255] log likelihood: -4042.463604
EM: Round [256] log likelihood: -4042.460664
EM: Round [257] log likelihood: -4042.457754
EM: Round [258] log likelihood: -4042.454874
EM: Round [259] log likelihood: -4042.452024
EM: Round [260] log likelihood: -4042.449203
EM: Round [261] log likelihood: -4042.446411
EM: Round [262] log likelihood: -4042.443647
EM: Round [263] log likelihood: -4042.440911
EM: Round [264] log likelihood: -4042.438203
EM: Round [265] log likelihood: -4042.435522
EM: Round [266] log likelihood: -4042.432869
EM: Round [267] log likelihood: -4042.430242
EM: Round [268] log likelihood: -4042.427642
EM: Round [269] log likelihood: -4042.425067
EM: Round [270] log likelihood: -4042.422519
EM: Round [271] log likelihood: -4042.419996
EM: Round [272] log likelihood: -4042.417499
EM: Round [273] log likelihood: -4042.415026
EM: Round [274] log likelihood: -4042.412578
EM: Round [275] log likelihood: -4042.410155
EM: Round [276] log likelihood: -4042.407755
EM: Round [277] log likelihood: -4042.405379
EM: Round [278] log likelihood: -4042.403027
EM: Round [279] log likelihood: -4042.400698
EM: Round [280] log likelihood: -4042.398392
EM: Round [281] log likelihood: -4042.396109
EM: Round [282] log likelihood: -4042.393848
EM: Round [283] log likelihood: -4042.391609
EM: Round [284] log likelihood: -4042.389393
EM: Round [285] log likelihood: -4042.387198
EM: Round [286] log likelihood: -4042.385024
EM: Round [287] log likelihood: -4042.382872
EM: Round [288] log likelihood: -4042.380741
EM: Round [289] log likelihood: -4042.378630
EM: Round [290] log likelihood: -4042.376540
EM: Round [291] log likelihood: -4042.374470
EM: Round [292] log likelihood: -4042.372420
EM: Round [293] log likelihood: -4042.370390
EM: Round [294] log likelihood: -4042.368379
EM: Round [295] log likelihood: -4042.366388
EM: Round [296] log likelihood: -4042.364416
EM: Round [297] log likelihood: -4042.362463
EM: Round [298] log likelihood: -4042.360529
EM: Round [299] log likelihood: -4042.358613
EM: Round [300] log likelihood: -4042.356716
EM: Round [301] log likelihood: -4042.354837
EM: Round [302] log likelihood: -4042.352975
EM: Round [303] log likelihood: -4042.351132
EM: Round [304] log likelihood: -4042.349306
EM: Round [305] log likelihood: -4042.347497
EM: Round [306] log likelihood: -4042.345705
EM: Round [307] log likelihood: -4042.343930
EM: Round [308] log likelihood: -4042.342173
EM: Round [309] log likelihood: -4042.340431
EM: Round [310] log likelihood: -4042.338706
EM: Round [311] log likelihood: -4042.336998
EM: Round [312] log likelihood: -4042.335305
EM: Round [313] log likelihood: -4042.333629
EM: Round [314] log likelihood: -4042.331968
EM: Round [315] log likelihood: -4042.330322
EM: Round [316] log likelihood: -4042.328692
EM: Round [317] log likelihood: -4042.327078
EM: Round [318] log likelihood: -4042.325478
EM: Round [319] log likelihood: -4042.323893
EM: Round [320] log likelihood: -4042.322323
EM: Round [321] log likelihood: -4042.320768
EM: Round [322] log likelihood: -4042.319227
EM: Round [323] log likelihood: -4042.317700
EM: Round [324] log likelihood: -4042.316187
EM: Round [325] log likelihood: -4042.314689
EM: Round [326] log likelihood: -4042.313204
EM: Round [327] log likelihood: -4042.311733
EM: Round [328] log likelihood: -4042.310275
EM: Round [329] log likelihood: -4042.308831
EM: Round [330] log likelihood: -4042.307400
EM: Round [331] log likelihood: -4042.305983
EM: Round [332] log likelihood: -4042.304578
EM: Round [333] log likelihood: -4042.303186
EM: Round [334] log likelihood: -4042.301807
EM: Round [335] log likelihood: -4042.300441
EM: Round [336] log likelihood: -4042.299087
EM: Round [337] log likelihood: -4042.297745
EM: Round [338] log likelihood: -4042.296415
EM: Round [339] log likelihood: -4042.295098
EM: Round [340] log likelihood: -4042.293793
EM: Round [341] log likelihood: -4042.292499
EM: Round [342] log likelihood: -4042.291217
EM: Round [343] log likelihood: -4042.289947
EM: Round [344] log likelihood: -4042.288688
EM: Round [345] log likelihood: -4042.287441
EM: Round [346] log likelihood: -4042.286204
EM: Round [347] log likelihood: -4042.284979
EM: Round [348] log likelihood: -4042.283765
EM: Round [349] log likelihood: -4042.282562
EM: Round [350] log likelihood: -4042.281370
EM: Round [351] log likelihood: -4042.280189
EM: Round [352] log likelihood: -4042.279018
EM: Round [353] log likelihood: -4042.277857
EM: Round [354] log likelihood: -4042.276707
EM: Round [355] log likelihood: -4042.275567
EM: Round [356] log likelihood: -4042.274437
EM: Round [357] log likelihood: -4042.273318
EM: Round [358] log likelihood: -4042.272208
EM: Round [359] log likelihood: -4042.271108
EM: Round [360] log likelihood: -4042.270018
EM: Round [361] log likelihood: -4042.268938
EM: Round [362] log likelihood: -4042.267867
EM: Round [363] log likelihood: -4042.266806
EM: Round [364] log likelihood: -4042.265754
EM: Round [365] log likelihood: -4042.264712
EM: Round [366] log likelihood: -4042.263678
EM: Round [367] log likelihood: -4042.262654
EM: Round [368] log likelihood: -4042.261639
EM: Round [369] log likelihood: -4042.260632
EM: Round [370] log likelihood: -4042.259635
EM: Round [371] log likelihood: -4042.258646
EM: Round [372] log likelihood: -4042.257666
EM: Round [373] log likelihood: -4042.256695
EM: Round [374] log likelihood: -4042.255732
EM: Round [375] log likelihood: -4042.254778
EM: Round [376] log likelihood: -4042.253832
EM: Round [377] log likelihood: -4042.252894
EM: Round [378] log likelihood: -4042.251964
EM: Round [379] log likelihood: -4042.251043
EM: Round [380] log likelihood: -4042.250129
EM: Round [381] log likelihood: -4042.249224
EM: Round [382] log likelihood: -4042.248326
EM: Round [383] log likelihood: -4042.247436
EM: Round [384] log likelihood: -4042.246554
EM: Round [385] log likelihood: -4042.245679
EM: Round [386] log likelihood: -4042.244812
EM: Round [387] log likelihood: -4042.243953
EM: Round [388] log likelihood: -4042.243101
EM: Round [389] log likelihood: -4042.242256
EM: Round [390] log likelihood: -4042.241419
EM: Round [391] log likelihood: -4042.240589
EM: Round [392] log likelihood: -4042.239766
EM: Round [393] log likelihood: -4042.238950
EM: Round [394] log likelihood: -4042.238141
EM: Round [395] log likelihood: -4042.237339
EM: Round [396] log likelihood: -4042.236544
EM: Round [397] log likelihood: -4042.235756
EM: Round [398] log likelihood: -4042.234974
EM: Round [399] log likelihood: -4042.234200
EM: Round [400] log likelihood: -4042.233432
EM: Round [401] log likelihood: -4042.232670
EM: Round [402] log likelihood: -4042.231915
EM: Round [403] log likelihood: -4042.231166
EM: Round [404] log likelihood: -4042.230424
EM: Round [405] log likelihood: -4042.229688
EM: Round [406] log likelihood: -4042.228958
EM: Round [407] log likelihood: -4042.228235
EM: Round [408] log likelihood: -4042.227518
EM: Round [409] log likelihood: -4042.226806
EM: Round [410] log likelihood: -4042.226101
EM: Round [411] log likelihood: -4042.225402
EM: Round [412] log likelihood: -4042.224709
EM: Round [413] log likelihood: -4042.224021
EM: Round [414] log likelihood: -4042.223340
EM: Round [415] log likelihood: -4042.222664
EM: Round [416] log likelihood: -4042.221994
EM: Round [417] log likelihood: -4042.221329
EM: Round [418] log likelihood: -4042.220670
EM: Round [419] log likelihood: -4042.220017
EM: Round [420] log likelihood: -4042.219369
EM: Round [421] log likelihood: -4042.218727
EM: Round [422] log likelihood: -4042.218089
EM: Round [423] log likelihood: -4042.217458
EM: Round [424] log likelihood: -4042.216831
EM: Round [425] log likelihood: -4042.216210
EM: Round [426] log likelihood: -4042.215594
EM: Round [427] log likelihood: -4042.214984
EM: Round [428] log likelihood: -4042.214378
EM: Round [429] log likelihood: -4042.213777
EM: Round [430] log likelihood: -4042.213182
EM: Round [431] log likelihood: -4042.212591
EM: Round [432] log likelihood: -4042.212005
EM: Round [433] log likelihood: -4042.211424
EM: Round [434] log likelihood: -4042.210848
EM: Round [435] log likelihood: -4042.210277
EM: Round [436] log likelihood: -4042.209711
EM: Round [437] log likelihood: -4042.209149
EM: Round [438] log likelihood: -4042.208592
EM: Round [439] log likelihood: -4042.208039
EM: Round [440] log likelihood: -4042.207491
EM: Round [441] log likelihood: -4042.206948
EM: Round [442] log likelihood: -4042.206409
EM: Round [443] log likelihood: -4042.205874
EM: Round [444] log likelihood: -4042.205344
EM: Round [445] log likelihood: -4042.204819
EM: Round [446] log likelihood: -4042.204297
EM: Round [447] log likelihood: -4042.203780
EM: Round [448] log likelihood: -4042.203268
EM: Round [449] log likelihood: -4042.202759
EM: Round [450] log likelihood: -4042.202255
EM: Round [451] log likelihood: -4042.201754
EM: Round [452] log likelihood: -4042.201258
EM: Round [453] log likelihood: -4042.200766
EM: Round [454] log likelihood: -4042.200278
EM: Round [455] log likelihood: -4042.199794
EM: Round [456] log likelihood: -4042.199314
EM: Round [457] log likelihood: -4042.198838
EM: Round [458] log likelihood: -4042.198365
EM: Round [459] log likelihood: -4042.197897
EM: Round [460] log likelihood: -4042.197432
EM: Round [461] log likelihood: -4042.196972
EM: Round [462] log likelihood: -4042.196515
EM: Round [463] log likelihood: -4042.196061
EM: Round [464] log likelihood: -4042.195612
EM: Round [465] log likelihood: -4042.195165
EM: Round [466] log likelihood: -4042.194723
EM: Round [467] log likelihood: -4042.194284
EM: Round [468] log likelihood: -4042.193849
EM: Round [469] log likelihood: -4042.193417
EM: Round [470] log likelihood: -4042.192989
EM: Round [471] log likelihood: -4042.192564
EM: Round [472] log likelihood: -4042.192143
EM: Round [473] log likelihood: -4042.191725
EM: Round [474] log likelihood: -4042.191311
EM: Round [475] log likelihood: -4042.190900
EM: Round [476] log likelihood: -4042.190492
EM: Round [477] log likelihood: -4042.190087
EM: Round [478] log likelihood: -4042.189686
EM: Round [479] log likelihood: -4042.189288
EM: Round [480] log likelihood: -4042.188893
EM: Round [481] log likelihood: -4042.188501
EM: Round [482] log likelihood: -4042.188112
EM: Round [483] log likelihood: -4042.187727
EM: Round [484] log likelihood: -4042.187345
EM: Round [485] log likelihood: -4042.186965
EM: Round [486] log likelihood: -4042.186589
EM: Round [487] log likelihood: -4042.186216
EM: Round [488] log likelihood: -4042.185846
EM: Round [489] log likelihood: -4042.185478
EM: Round [490] log likelihood: -4042.185114
EM: Round [491] log likelihood: -4042.184753
EM: Round [492] log likelihood: -4042.184394
EM: Round [493] log likelihood: -4042.184038
EM: Round [494] log likelihood: -4042.183685
EM: Round [495] log likelihood: -4042.183335
EM: Round [496] log likelihood: -4042.182988
EM: Round [497] log likelihood: -4042.182643
EM: Round [498] log likelihood: -4042.182302
EM: Round [499] log likelihood: -4042.181963
EM: Round [500] log likelihood: -4042.181626
EM: Round [501] log likelihood: -4042.181293
EM: Round [502] log likelihood: -4042.180961
EM: Round [503] log likelihood: -4042.180633
EM: Round [504] log likelihood: -4042.180307
EM: Round [505] log likelihood: -4042.179984
EM: Round [506] log likelihood: -4042.179663
EM: Round [507] log likelihood: -4042.179345
EM: Round [508] log likelihood: -4042.179029
EM: Round [509] log likelihood: -4042.178716
EM: Round [510] log likelihood: -4042.178405
EM: Round [511] log likelihood: -4042.178097
EM: Round [512] log likelihood: -4042.177791
EM: Round [513] log likelihood: -4042.177488
EM: Round [514] log likelihood: -4042.177187
EM: Round [515] log likelihood: -4042.176888
EM: Round [516] log likelihood: -4042.176592
EM: Round [517] log likelihood: -4042.176298
EM: Round [518] log likelihood: -4042.176006
EM: Round [519] log likelihood: -4042.175717
EM: Round [520] log likelihood: -4042.175430
EM: Round [521] log likelihood: -4042.175145
EM: Round [522] log likelihood: -4042.174862
EM: Round [523] log likelihood: -4042.174582
EM: Round [524] log likelihood: -4042.174303
EM: Round [525] log likelihood: -4042.174027
EM: Round [526] log likelihood: -4042.173753
EM: Round [527] log likelihood: -4042.173482
EM: Round [528] log likelihood: -4042.173212
EM: Round [529] log likelihood: -4042.172944
EM: Round [530] log likelihood: -4042.172679
EM: Round [531] log likelihood: -4042.172415
EM: Round [532] log likelihood: -4042.172154
EM: Round [533] log likelihood: -4042.171895
EM: Round [534] log likelihood: -4042.171637
EM: Round [535] log likelihood: -4042.171382
EM: Round [536] log likelihood: -4042.171129
EM: Round [537] log likelihood: -4042.170877
EM: Round [538] log likelihood: -4042.170628
EM: Round [539] log likelihood: -4042.170380
EM: Round [540] log likelihood: -4042.170135
EM: Round [541] log likelihood: -4042.169891
EM: Round [542] log likelihood: -4042.169649
EM: Round [543] log likelihood: -4042.169409
EM: Round [544] log likelihood: -4042.169171
EM: Round [545] log likelihood: -4042.168935
EM: Round [546] log likelihood: -4042.168701
EM: Round [547] log likelihood: -4042.168468
EM: Round [548] log likelihood: -4042.168237
EM: Round [549] log likelihood: -4042.168008
EM: Round [550] log likelihood: -4042.167781
EM: Round [551] log likelihood: -4042.167555
EM: Round [552] log likelihood: -4042.167332
EM: Round [553] log likelihood: -4042.167110
EM: Round [554] log likelihood: -4042.166889
EM: Round [555] log likelihood: -4042.166671
EM: Round [556] log likelihood: -4042.166453
EM: Round [557] log likelihood: -4042.166238
EM: Round [558] log likelihood: -4042.166024
EM: Round [559] log likelihood: -4042.165812
EM: Round [560] log likelihood: -4042.165602
EM: Round [561] log likelihood: -4042.165393
EM: Round [562] log likelihood: -4042.165186
EM: Round [563] log likelihood: -4042.164980
EM: Round [564] log likelihood: -4042.164776
EM: Round [565] log likelihood: -4042.164574
EM: Round [566] log likelihood: -4042.164373
EM: Round [567] log likelihood: -4042.164173
EM: Round [568] log likelihood: -4042.163975
EM: Round [569] log likelihood: -4042.163779
EM: Round [570] log likelihood: -4042.163584
EM: Round [571] log likelihood: -4042.163391
EM: Round [572] log likelihood: -4042.163199
EM: Round [573] log likelihood: -4042.163008
EM: Round [574] log likelihood: -4042.162819
EM: Round [575] log likelihood: -4042.162631
EM: Round [576] log likelihood: -4042.162445
EM: Round [577] log likelihood: -4042.162260
EM: Round [578] log likelihood: -4042.162077
EM: Round [579] log likelihood: -4042.161895
EM: Round [580] log likelihood: -4042.161714
EM: Round [581] log likelihood: -4042.161535
EM: Round [582] log likelihood: -4042.161357
EM: Round [583] log likelihood: -4042.161181
EM: Round [584] log likelihood: -4042.161005
EM: Round [585] log likelihood: -4042.160832
EM: Round [586] log likelihood: -4042.160659
EM: Round [587] log likelihood: -4042.160488
EM: Round [588] log likelihood: -4042.160318
EM: Round [589] log likelihood: -4042.160149
EM: Round [590] log likelihood: -4042.159982
EM: Round [591] log likelihood: -4042.159815
EM: Round [592] log likelihood: -4042.159650
EM: Round [593] log likelihood: -4042.159487
EM: Round [594] log likelihood: -4042.159324
EM: Round [595] log likelihood: -4042.159163
EM: Round [596] log likelihood: -4042.159003
EM: Round [597] log likelihood: -4042.158844
EM: Round [598] log likelihood: -4042.158686
EM: Round [599] log likelihood: -4042.158530
EM: Round [600] log likelihood: -4042.158375
EM: Round [601] log likelihood: -4042.158221
EM: Round [602] log likelihood: -4042.158068
EM: Round [603] log likelihood: -4042.157916
EM: Round [604] log likelihood: -4042.157765
EM: Round [605] log likelihood: -4042.157615
EM: Round [606] log likelihood: -4042.157467
EM: Round [607] log likelihood: -4042.157320
EM: Round [608] log likelihood: -4042.157173
EM: Round [609] log likelihood: -4042.157028
EM: Round [610] log likelihood: -4042.156884
EM: Round [611] log likelihood: -4042.156741
EM: Round [612] log likelihood: -4042.156599
EM: Round [613] log likelihood: -4042.156458
EM: Round [614] log likelihood: -4042.156319
EM: Round [615] log likelihood: -4042.156180
EM: Round [616] log likelihood: -4042.156042
EM: Round [617] log likelihood: -4042.155905
EM: Round [618] log likelihood: -4042.155770
EM: Round [619] log likelihood: -4042.155635
EM: Round [620] log likelihood: -4042.155501
EM: Round [621] log likelihood: -4042.155368
EM: Round [622] log likelihood: -4042.155237
EM: Round [623] log likelihood: -4042.155106
EM: Round [624] log likelihood: -4042.154976
EM: Round [625] log likelihood: -4042.154847
EM: Round [626] log likelihood: -4042.154719
EM: Round [627] log likelihood: -4042.154592
EM: Round [628] log likelihood: -4042.154466
EM: Round [629] log likelihood: -4042.154341
EM: Round [630] log likelihood: -4042.154217
EM: Round [631] log likelihood: -4042.154094
EM: Round [632] log likelihood: -4042.153972
EM: Round [633] log likelihood: -4042.153850
EM: Round [634] log likelihood: -4042.153730
EM: Round [635] log likelihood: -4042.153610
EM: Round [636] log likelihood: -4042.153491
EM: Round [637] log likelihood: -4042.153373
EM: Round [638] log likelihood: -4042.153256
EM: Round [639] log likelihood: -4042.153140
EM: Round [640] log likelihood: -4042.153025
EM: Round [641] log likelihood: -4042.152910
EM: Round [642] log likelihood: -4042.152797
EM: Round [643] log likelihood: -4042.152684
EM: Round [644] log likelihood: -4042.152572
EM: Round [645] log likelihood: -4042.152461
EM: Round [646] log likelihood: -4042.152351
EM: Round [647] log likelihood: -4042.152241
EM: Round [648] log likelihood: -4042.152132
EM: Round [649] log likelihood: -4042.152024
EM: Round [650] log likelihood: -4042.151917
EM: Round [651] log likelihood: -4042.151811
EM: Round [652] log likelihood: -4042.151705
EM: Round [653] log likelihood: -4042.151601
EM: Round [654] log likelihood: -4042.151497
EM: Round [655] log likelihood: -4042.151393
EM: Round [656] log likelihood: -4042.151291
EM: Round [657] log likelihood: -4042.151189
EM: Round [658] log likelihood: -4042.151088
EM: Round [659] log likelihood: -4042.150988
EM: Round [660] log likelihood: -4042.150888
EM: Stopping iterations at round 660 due to insufficient improvement in likelihood.
[bam_sort_core] merging from 0 files and 8 in-memory blocks...
-extracting read coordinates from /tmp/nxf.YrOfHpI81T/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.consolidated.bam into /tmp/nxf.YrOfHpI81T/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.consolidated.bam.read_coords

CMD: touch /tmp/nxf.YrOfHpI81T/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.consolidated.bam.read_coords.ok
CMD: /usr/bin/sort --parallel=1 -S10G -T . -k1,1 -k2,2 -k4,4n /tmp/nxf.YrOfHpI81T/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.consolidated.bam.read_coords > /tmp/nxf.YrOfHpI81T/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.consolidated.bam.read_coords.sort_by_readname
CMD: /usr/bin/sort --parallel=1 -S10G -T . -k1,1 -k3,3n /tmp/nxf.YrOfHpI81T/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.consolidated.bam.frag_coords > /tmp/nxf.YrOfHpI81T/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.consolidated.bam.frag_coords.coord_sorted
CMD: /usr/local/src/STAR-Fusion/FusionInspector/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.YrOfHpI81T/fi_workdir/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo --genome_lib_dir ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionInspector/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.YrOfHpI81T/fi_workdir/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo.post_blast_filter  --genome_lib_dir ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 50 
CMD: cp /tmp/nxf.YrOfHpI81T/fi_workdir/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo.post_blast_filter.post_promisc_filter /tmp/nxf.YrOfHpI81T/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.post_blast_and_promiscuity_filter
-done, see /tmp/nxf.YrOfHpI81T/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.post_blast_and_promiscuity_filter.annot_filter.pass
EM: Starting log likelihood: -2205.682388
EM: Round [1] log likelihood: -2205.682388
EM: Stopping iterations at round 1 due to insufficient improvement in likelihood.
-total frags in /tmp/nxf.YrOfHpI81T/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1_1.fastp.fastq.gz: 201017995
Warning - not locating file: /tmp/nxf.YrOfHpI81T/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.gmap_trinity_GG.fusions.gff3.bed
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000198237.8]
WARNING, no entry stored in dbm for [ENSG00000237283.2]
WARNING, no entry stored in dbm for [ENSG00000237283.2]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000224490.5]
ls: cannot access 'IGV_inputs': No such file or directory