.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/50/f9777934c6d9c0fce4292e0571cb69/.command.err
Size: 25.2 KB
Task: NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1)
Attempt
Content

-ctat genome lib [/tmp/nxf.s0I6LimJLq/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.s0I6LimJLq/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary
-sample contains 27451739 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.s0I6LimJLq/ctat_genome_lib_build_dir  -J /tmp/nxf.s0I6LimJLq/1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  -O /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.s0I6LimJLq/1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.s0I6LimJLq/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=33333.33/min 
[20000], rate=36363.64/min 
[30000], rate=39130.43/min 
[40000], rate=40677.97/min 
[50000], rate=43478.26/min 
[60000], rate=46153.85/min 
[70000], rate=48837.21/min 
[80000], rate=51063.83/min 
[90000], rate=51923.08/min 
[100000], rate=53097.35/min 
[110000], rate=54545.45/min 
[120000], rate=56250.00/min 
[130000], rate=56934.31/min 
[140000], rate=57931.03/min 
[150000], rate=59602.65/min 
[160000], rate=60000.00/min 
[170000], rate=60714.29/min 
[180000], rate=62068.97/min 
[190000], rate=62295.08/min 
[200000], rate=62500.00/min 
[210000], rate=61165.05/min 
[220000], rate=60000.00/min 
[230000], rate=59482.76/min 
[240000], rate=59504.13/min 
[250000], rate=59523.81/min 
[260000], rate=59090.91/min 
[270000], rate=59124.09/min -building interval tree based on /tmp/nxf.s0I6LimJLq/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=46153.85/min 
[20000], rate=41379.31/min 
[30000], rate=43902.44/min 
[40000], rate=48000.00/min 
[50000], rate=50000.00/min 
[60000], rate=52173.91/min 
[70000], rate=51851.85/min 
[80000], rate=51612.90/min 
[90000], rate=51923.08/min 
[100000], rate=52173.91/min 
[110000], rate=53225.81/min 
[120000], rate=52173.91/min 
[130000], rate=52000.00/min 
[140000], rate=52830.19/min 
[150000], rate=53571.43/min 
[160000], rate=54237.29/min 
[170000], rate=54255.32/min 
[180000], rate=54271.36/min 
[190000], rate=55339.81/min 
[200000], rate=55299.54/min 
[210000], rate=54782.61/min 
[220000], rate=55000.00/min 
[230000], rate=56097.56/min 
[240000], rate=56250.00/min 
[250000], rate=56179.78/min 
[260000], rate=56521.74/min 
[270000], rate=56842.11/min -building interval tree based on /tmp/nxf.s0I6LimJLq/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=60000.00/min 
[20000], rate=60000.00/min 
[30000], rate=60000.00/min 
[40000], rate=58536.59/min 
[50000], rate=58823.53/min 
[60000], rate=59016.39/min 
[70000], rate=58333.33/min 
[80000], rate=57831.33/min 
[90000], rate=56250.00/min 
[100000], rate=55045.87/min 
[110000], rate=55000.00/min 
[120000], rate=54545.45/min 
[130000], rate=54929.58/min 
[140000], rate=55629.14/min 
[150000], rate=54545.45/min 
[160000], rate=53932.58/min 
[170000], rate=53125.00/min 
[180000], rate=52941.18/min 
[190000], rate=53271.03/min 
[200000], rate=54054.05/min 
[210000], rate=54310.34/min 
[220000], rate=53441.30/min 
[230000], rate=53076.92/min 
[240000], rate=52941.18/min 
[250000], rate=53191.49/min 
[260000], rate=53793.10/min 
[270000], rate=53465.35/min -building interval tree based on /tmp/nxf.s0I6LimJLq/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=85714.29/min 
[20000], rate=75000.00/min 
[30000], rate=78260.87/min 
[40000], rate=82758.62/min 
[50000], rate=81081.08/min 
[60000], rate=80000.00/min 
[70000], rate=67741.94/min 
[80000], rate=58536.59/min 
[90000], rate=54000.00/min 
[100000], rate=51724.14/min 
[110000], rate=50769.23/min 
[120000], rate=50349.65/min 
[130000], rate=50649.35/min 
[140000], rate=51219.51/min 
[150000], rate=52631.58/min 
[160000], rate=52747.25/min 
[170000], rate=52849.74/min 
[180000], rate=53731.34/min 
[190000], rate=54285.71/min 
[200000], rate=53571.43/min 
[210000], rate=53389.83/min 
[220000], rate=53225.81/min 
[230000], rate=53488.37/min 
[240000], rate=54339.62/min 
[250000], rate=53571.43/min 
[260000], rate=53242.32/min 
[270000], rate=53289.47/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.s0I6LimJLq/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 3000000.00 reads per min processed...  
 2400000.00 reads per min processed...  
 2571428.57 reads per min processed...  
 2400000.00 reads per min processed...  
 2727272.73 reads per min processed...  
 2571428.57 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.s0I6LimJLq/1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.s0I6LimJLq/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -195314.638174
EM: Round [1] log likelihood: -195262.220229
EM: Round [2] log likelihood: -195243.868059
EM: Round [3] log likelihood: -195235.437051
EM: Round [4] log likelihood: -195231.103982
EM: Round [5] log likelihood: -195228.747217
EM: Round [6] log likelihood: -195227.412316
EM: Round [7] log likelihood: -195226.627331
EM: Round [8] log likelihood: -195226.148667
EM: Round [9] log likelihood: -195225.846647
EM: Round [10] log likelihood: -195225.649991
EM: Round [11] log likelihood: -195225.518198
EM: Round [12] log likelihood: -195225.427506
EM: Round [13] log likelihood: -195225.363557
EM: Round [14] log likelihood: -195225.317439
EM: Round [15] log likelihood: -195225.283483
EM: Round [16] log likelihood: -195225.258000
EM: Round [17] log likelihood: -195225.238538
EM: Round [18] log likelihood: -195225.223435
EM: Round [19] log likelihood: -195225.211544
EM: Round [20] log likelihood: -195225.202057
EM: Round [21] log likelihood: -195225.194401
EM: Round [22] log likelihood: -195225.188157
EM: Round [23] log likelihood: -195225.183016
EM: Round [24] log likelihood: -195225.178751
EM: Round [25] log likelihood: -195225.175185
EM: Round [26] log likelihood: -195225.172186
EM: Round [27] log likelihood: -195225.169650
EM: Round [28] log likelihood: -195225.167494
EM: Round [29] log likelihood: -195225.165654
EM: Round [30] log likelihood: -195225.164078
EM: Round [31] log likelihood: -195225.162723
EM: Round [32] log likelihood: -195225.161554
EM: Round [33] log likelihood: -195225.160545
EM: Round [34] log likelihood: -195225.159670
EM: Round [35] log likelihood: -195225.158910
EM: Round [36] log likelihood: -195225.158250
EM: Round [37] log likelihood: -195225.157674
EM: Round [38] log likelihood: -195225.157172
EM: Round [39] log likelihood: -195225.156733
EM: Round [40] log likelihood: -195225.156349
EM: Round [41] log likelihood: -195225.156012
EM: Round [42] log likelihood: -195225.155717
EM: Round [43] log likelihood: -195225.155457
EM: Round [44] log likelihood: -195225.155230
EM: Round [45] log likelihood: -195225.155029
EM: Round [46] log likelihood: -195225.154853
EM: Round [47] log likelihood: -195225.154697
EM: Round [48] log likelihood: -195225.154560
EM: Round [49] log likelihood: -195225.154440
EM: Round [50] log likelihood: -195225.154333
EM: Round [51] log likelihood: -195225.154239
EM: Stopping iterations at round 51 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -195225.949000
EM: Round [1] log likelihood: -195182.725880
EM: Round [2] log likelihood: -195166.948670
EM: Round [3] log likelihood: -195159.441638
EM: Round [4] log likelihood: -195155.518617
EM: Round [5] log likelihood: -195153.376165
EM: Round [6] log likelihood: -195152.167185
EM: Round [7] log likelihood: -195151.462414
EM: Round [8] log likelihood: -195151.037858
EM: Round [9] log likelihood: -195150.773944
EM: Round [10] log likelihood: -195150.605069
EM: Round [11] log likelihood: -195150.494122
EM: Round [12] log likelihood: -195150.419467
EM: Round [13] log likelihood: -195150.368127
EM: Round [14] log likelihood: -195150.332114
EM: Round [15] log likelihood: -195150.306392
EM: Round [16] log likelihood: -195150.287716
EM: Round [17] log likelihood: -195150.273952
EM: Round [18] log likelihood: -195150.263670
EM: Round [19] log likelihood: -195150.255895
EM: Round [20] log likelihood: -195150.249950
EM: Round [21] log likelihood: -195150.245360
EM: Round [22] log likelihood: -195150.241785
EM: Round [23] log likelihood: -195150.238978
EM: Round [24] log likelihood: -195150.236759
EM: Round [25] log likelihood: -195150.234995
EM: Round [26] log likelihood: -195150.233584
EM: Round [27] log likelihood: -195150.232451
EM: Round [28] log likelihood: -195150.231537
EM: Round [29] log likelihood: -195150.230797
EM: Round [30] log likelihood: -195150.230197
EM: Round [31] log likelihood: -195150.229709
EM: Round [32] log likelihood: -195150.229310
EM: Round [33] log likelihood: -195150.228985
EM: Round [34] log likelihood: -195150.228718
EM: Round [35] log likelihood: -195150.228499
EM: Round [36] log likelihood: -195150.228320
EM: Round [37] log likelihood: -195150.228172
EM: Round [38] log likelihood: -195150.228051
EM: Round [39] log likelihood: -195150.227951
EM: Round [40] log likelihood: -195150.227868
EM: Stopping iterations at round 40 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.s0I6LimJLq/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.s0I6LimJLq/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.s0I6LimJLq/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 27451739 > /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.s0I6LimJLq/ctat_genome_lib_build_dir > /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.s0I6LimJLq/ctat_genome_lib_build_dir --annotate /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.s0I6LimJLq/ctat_genome_lib_build_dir
-done, see /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.s0I6LimJLq/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 823, filtered: 7526)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.s0I6LimJLq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.s0I6LimJLq/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000240498.9]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000234152.1]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000205745.2]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000272235.1]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000252594.1]
WARNING, no entry stored in dbm for [ENSG00000286071.1]
WARNING, no entry stored in dbm for [ENSG00000286291.1]
WARNING, no entry stored in dbm for [ENSG00000279014.1]
WARNING, no entry stored in dbm for [ENSG00000272848.2]
WARNING, no entry stored in dbm for [ENSG00000256681.1]
WARNING, no entry stored in dbm for [ENSG00000237298.10]
WARNING, no entry stored in dbm for [ENSG00000223756.7]
WARNING, no entry stored in dbm for [ENSG00000223756.7]
WARNING, no entry stored in dbm for [ENSG00000270641.1]
WARNING, no entry stored in dbm for [ENSG00000284846.1]
WARNING, no entry stored in dbm for [ENSG00000279009.1]
WARNING, no entry stored in dbm for [ENSG00000258260.1]
WARNING, no entry stored in dbm for [ENSG00000267009.6]
WARNING, no entry stored in dbm for [ENSG00000281128.2]
WARNING, no entry stored in dbm for [ENSG00000272405.1]
WARNING, no entry stored in dbm for [ENSG00000259663.2]
WARNING, no entry stored in dbm for [ENSG00000287650.1]
WARNING, no entry stored in dbm for [ENSG00000232626.3]
WARNING, no entry stored in dbm for [ENSG00000234785.1]
WARNING, no entry stored in dbm for [ENSG00000256612.7]
WARNING, no entry stored in dbm for [ENSG00000258647.6]
WARNING, no entry stored in dbm for [ENSG00000165121.11]
WARNING, no entry stored in dbm for [ENSG00000201557.1]
WARNING, no entry stored in dbm for [ENSG00000206633.1]
WARNING, no entry stored in dbm for [ENSG00000269893.8]
WARNING, no entry stored in dbm for [ENSG00000242125.3]
WARNING, no entry stored in dbm for [ENSG00000175061.18]
WARNING, no entry stored in dbm for [ENSG00000242902.1]
WARNING, no entry stored in dbm for [ENSG00000287920.1]
WARNING, no entry stored in dbm for [ENSG00000213332.4]
WARNING, no entry stored in dbm for [ENSG00000213332.4]
WARNING, no entry stored in dbm for [ENSG00000228340.6]
WARNING, no entry stored in dbm for [ENSG00000243679.1]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000242814.2]
WARNING, no entry stored in dbm for [ENSG00000242814.2]
WARNING, no entry stored in dbm for [ENSG00000262039.1]
WARNING, no entry stored in dbm for [ENSG00000236360.2]
WARNING, no entry stored in dbm for [ENSG00000284882.1]
WARNING, no entry stored in dbm for [ENSG00000200975.1]
WARNING, no entry stored in dbm for [ENSG00000279738.1]
WARNING, no entry stored in dbm for [ENSG00000236548.2]
WARNING, no entry stored in dbm for [ENSG00000241785.3]
WARNING, no entry stored in dbm for [ENSG00000252757.1]
WARNING, no entry stored in dbm for [ENSG00000224729.6]
WARNING, no entry stored in dbm for [ENSG00000254109.6]
WARNING, no entry stored in dbm for [ENSG00000203993.6]
WARNING, no entry stored in dbm for [ENSG00000250056.8]
WARNING, no entry stored in dbm for [ENSG00000230681.1]
WARNING, no entry stored in dbm for [ENSG00000272606.1]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000284630.1]
WARNING, no entry stored in dbm for [ENSG00000240935.6]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000237222.4]
WARNING, no entry stored in dbm for [ENSG00000269907.1]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000258912.2]
WARNING, no entry stored in dbm for [ENSG00000261183.5]
WARNING, no entry stored in dbm for [ENSG00000253557.6]
WARNING, no entry stored in dbm for [ENSG00000260032.2]
WARNING, no entry stored in dbm for [ENSG00000233382.7]
WARNING, no entry stored in dbm for [ENSG00000250980.1]
WARNING, no entry stored in dbm for [ENSG00000278768.2]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000200434.1]
WARNING, no entry stored in dbm for [ENSG00000230979.3]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000256508.2]
WARNING, no entry stored in dbm for [ENSG00000259577.2]
WARNING, no entry stored in dbm for [ENSG00000279100.1]
WARNING, no entry stored in dbm for [ENSG00000258819.2]
WARNING, no entry stored in dbm for [ENSG00000262468.6]
WARNING, no entry stored in dbm for [ENSG00000225564.6]
WARNING, no entry stored in dbm for [ENSG00000233723.9]
WARNING, no entry stored in dbm for [ENSG00000264169.2]
WARNING, no entry stored in dbm for [ENSG00000233723.9]
WARNING, no entry stored in dbm for [ENSG00000239607.3]
WARNING, no entry stored in dbm for [ENSG00000235770.6]
WARNING, no entry stored in dbm for [ENSG00000227036.8]
WARNING, no entry stored in dbm for [ENSG00000260807.7]
WARNING, no entry stored in dbm for [ENSG00000267325.2]
WARNING, no entry stored in dbm for [ENSG00000272758.6]
WARNING, no entry stored in dbm for [ENSG00000249042.6]
WARNING, no entry stored in dbm for [ENSG00000286511.1]
WARNING, no entry stored in dbm for [ENSG00000244300.3]
WARNING, no entry stored in dbm for [ENSG00000204622.11]
WARNING, no entry stored in dbm for [ENSG00000235290.1]
WARNING, no entry stored in dbm for [ENSG00000281344.1]
WARNING, no entry stored in dbm for [ENSG00000232829.3]
WARNING, no entry stored in dbm for [ENSG00000249353.2]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000234988.2]
WARNING, no entry stored in dbm for [ENSG00000279672.1]
WARNING, no entry stored in dbm for [ENSG00000250330.1]
WARNING, no entry stored in dbm for [ENSG00000250221.1]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000255052.5]
WARNING, no entry stored in dbm for [ENSG00000254016.3]
WARNING, no entry stored in dbm for [ENSG00000248429.5]
WARNING, no entry stored in dbm for [ENSG00000234709.2]
WARNING, no entry stored in dbm for [ENSG00000258479.6]
WARNING, no entry stored in dbm for [ENSG00000204623.9]
WARNING, no entry stored in dbm for [ENSG00000243859.3]
WARNING, no entry stored in dbm for [ENSG00000281649.2]
WARNING, no entry stored in dbm for [ENSG00000273143.2]
WARNING, no entry stored in dbm for [ENSG00000186704.9]
WARNING, no entry stored in dbm for [ENSG00000287480.1]
WARNING, no entry stored in dbm for [ENSG00000219201.4]
WARNING, no entry stored in dbm for [ENSG00000223518.5]
WARNING, no entry stored in dbm for [ENSG00000276077.4]
WARNING, no entry stored in dbm for [ENSG00000239332.6]
WARNING, no entry stored in dbm for [ENSG00000249859.12]
WARNING, no entry stored in dbm for [ENSG00000286291.1]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000272620.2]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000243439.3]
WARNING, no entry stored in dbm for [ENSG00000230687.1]
WARNING, no entry stored in dbm for [ENSG00000288538.1]
WARNING, no entry stored in dbm for [ENSG00000213406.3]
WARNING, no entry stored in dbm for [ENSG00000269332.5]
WARNING, no entry stored in dbm for [ENSG00000259516.2]
WARNING, no entry stored in dbm for [ENSG00000281344.1]
WARNING, no entry stored in dbm for [ENSG00000230021.10]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000237445.2]
WARNING, no entry stored in dbm for [ENSG00000236523.2]
WARNING, no entry stored in dbm for [ENSG00000261211.1]
WARNING, no entry stored in dbm for [ENSG00000279110.1]
WARNING, no entry stored in dbm for [ENSG00000268257.2]
WARNING, no entry stored in dbm for [ENSG00000241547.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000261153.2]
WARNING, no entry stored in dbm for [ENSG00000261193.1]
WARNING, no entry stored in dbm for [ENSG00000258232.2]
WARNING, no entry stored in dbm for [ENSG00000278791.1]
WARNING, no entry stored in dbm for [ENSG00000213486.3]
WARNING, no entry stored in dbm for [ENSG00000224987.1]
WARNING, no entry stored in dbm for [ENSG00000205976.4]
WARNING, no entry stored in dbm for [ENSG00000243635.1]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000263165.1]
WARNING, no entry stored in dbm for [ENSG00000288663.1]
WARNING, no entry stored in dbm for [ENSG00000239985.2]
WARNING, no entry stored in dbm for [ENSG00000224365.1]
WARNING, no entry stored in dbm for [ENSG00000267340.1]
WARNING, no entry stored in dbm for [ENSG00000226532.1]
WARNING, no entry stored in dbm for [ENSG00000254951.7]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000267277.1]
WARNING, no entry stored in dbm for [ENSG00000248878.1]
WARNING, no entry stored in dbm for [ENSG00000249406.3]
WARNING, no entry stored in dbm for [ENSG00000257453.1]
WARNING, no entry stored in dbm for [ENSG00000258017.2]
WARNING, no entry stored in dbm for [ENSG00000258017.2]
WARNING, no entry stored in dbm for [ENSG00000235726.7]
WARNING, no entry stored in dbm for [ENSG00000254027.1]
WARNING, no entry stored in dbm for [ENSG00000239254.1]
WARNING, no entry stored in dbm for [ENSG00000213414.3]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000267469.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.s0I6LimJLq/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)