AIH curated blacklist: matched 5 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 154
Pass (FILTER=PASS): 22 (14.3%)
Fail (FILTER=FAIL): 132 (85.7%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 5
All 5 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 69
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 12
confidence_below_min(low<high): 8
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 3
total_reads_below_min(6.0<8.0): 2
total_reads_below_min(4.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
total_reads_below_min(7.0<8.0): 1
total_reads_below_min(5.0<8.0): 1
total_reads_below_min(3.0<8.0): 1
Breakdown by confidence:
high: 22 pass, 7 fail (total: 29)
low: 0 pass, 46 fail (total: 46)
medium: 0 pass, 79 fail (total: 79)
Arriba filter: 154 rows -> 22 PASS; wrote 1173_PCB_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filtered.tsv and 1173_PCB_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 1173_PCB_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filter_summary.txt