Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6f/2ba78742c24fb1200e73180af2dce5/1173_FM_T1_RNA_SLD_01_A23T55JLT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b8/363eba166e988cf76c8e6b793254d1/1173_FM_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c0/ef37f305cf24736bcc8592379e1c36/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6f/2ba78742c24fb1200e73180af2dce5/1173_FM_T1_RNA_SLD_01_A23T55JLT4_1_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c0/ef37f305cf24736bcc8592379e1c36/.command.run
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.9qMYLVQT2C/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.9qMYLVQT2C/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary
-sample contains 293729159 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.9qMYLVQT2C/ctat_genome_lib_build_dir  -J /tmp/nxf.9qMYLVQT2C/1173_FM_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  -O /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.9qMYLVQT2C/1173_FM_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.9qMYLVQT2C/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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-building interval tree based on /tmp/nxf.9qMYLVQT2C/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[2710000], rate=49094.20/min 
-building interval tree based on /tmp/nxf.9qMYLVQT2C/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=50000.00/min 
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[3920000], rate=54356.37/min 
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[3940000], rate=54419.89/min 
[3950000], rate=54445.21/min -building interval tree based on /tmp/nxf.9qMYLVQT2C/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=66666.67/min 
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[3930000], rate=42295.96/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.9qMYLVQT2C/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

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 5433962.26 reads per min processed...  
 5439252.34 reads per min processed...  
 5444444.44 reads per min processed...  
 5400000.00 reads per min processed...  
 5405405.41 reads per min processed...  
 5410714.29 reads per min processed...  
 5415929.20 reads per min processed...  
 5421052.63 reads per min processed...  
 5426086.96 reads per min processed...  
 5384615.38 reads per min processed...  
 5389830.51 reads per min processed...  
 5394957.98 reads per min processed...  
 5400000.00 reads per min processed...  
 5404958.68 reads per min processed...  
 5409836.07 reads per min processed...  
 5370967.74 reads per min processed...  
 5376000.00 reads per min processed...  
 5380952.38 reads per min processed...  
 5385826.77 reads per min processed...  
 5348837.21 reads per min processed...  
 5353846.15 reads per min processed...  
 5358778.63 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.9qMYLVQT2C/1173_FM_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.9qMYLVQT2C/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -1940403.991528
EM: Round [1] log likelihood: -1939252.448667
EM: Round [2] log likelihood: -1938936.590695
EM: Round [3] log likelihood: -1938802.498041
EM: Round [4] log likelihood: -1938733.651794
EM: Round [5] log likelihood: -1938694.685029
EM: Round [6] log likelihood: -1938671.110280
EM: Round [7] log likelihood: -1938656.013745
EM: Round [8] log likelihood: -1938645.835030
EM: Round [9] log likelihood: -1938638.647430
EM: Round [10] log likelihood: -1938633.363445
EM: Round [11] log likelihood: -1938629.343926
EM: Round [12] log likelihood: -1938626.197971
EM: Round [13] log likelihood: -1938623.677063
EM: Round [14] log likelihood: -1938621.617290
EM: Round [15] log likelihood: -1938619.906812
EM: Round [16] log likelihood: -1938618.466952
EM: Round [17] log likelihood: -1938617.240842
EM: Round [18] log likelihood: -1938616.186393
EM: Round [19] log likelihood: -1938615.271800
EM: Round [20] log likelihood: -1938614.472589
EM: Round [21] log likelihood: -1938613.769620
EM: Round [22] log likelihood: -1938613.147712
EM: Round [23] log likelihood: -1938612.594669
EM: Round [24] log likelihood: -1938612.100581
EM: Round [25] log likelihood: -1938611.657312
EM: Round [26] log likelihood: -1938611.258118
EM: Round [27] log likelihood: -1938610.897366
EM: Round [28] log likelihood: -1938610.570309
EM: Round [29] log likelihood: -1938610.272925
EM: Round [30] log likelihood: -1938610.001779
EM: Round [31] log likelihood: -1938609.753925
EM: Round [32] log likelihood: -1938609.526821
EM: Round [33] log likelihood: -1938609.318262
EM: Round [34] log likelihood: -1938609.126328
EM: Round [35] log likelihood: -1938608.949341
EM: Round [36] log likelihood: -1938608.785829
EM: Round [37] log likelihood: -1938608.634493
EM: Round [38] log likelihood: -1938608.494188
EM: Round [39] log likelihood: -1938608.363896
EM: Round [40] log likelihood: -1938608.242716
EM: Round [41] log likelihood: -1938608.129841
EM: Round [42] log likelihood: -1938608.024552
EM: Round [43] log likelihood: -1938607.926205
EM: Round [44] log likelihood: -1938607.834220
EM: Round [45] log likelihood: -1938607.748077
EM: Round [46] log likelihood: -1938607.667308
EM: Round [47] log likelihood: -1938607.591486
EM: Round [48] log likelihood: -1938607.520229
EM: Round [49] log likelihood: -1938607.453189
EM: Round [50] log likelihood: -1938607.390049
EM: Round [51] log likelihood: -1938607.330521
EM: Round [52] log likelihood: -1938607.274343
EM: Round [53] log likelihood: -1938607.221276
EM: Round [54] log likelihood: -1938607.171102
EM: Round [55] log likelihood: -1938607.123619
EM: Round [56] log likelihood: -1938607.078644
EM: Round [57] log likelihood: -1938607.036010
EM: Round [58] log likelihood: -1938606.995560
EM: Round [59] log likelihood: -1938606.957152
EM: Round [60] log likelihood: -1938606.920656
EM: Round [61] log likelihood: -1938606.885949
EM: Round [62] log likelihood: -1938606.852921
EM: Round [63] log likelihood: -1938606.821467
EM: Round [64] log likelihood: -1938606.791493
EM: Round [65] log likelihood: -1938606.762909
EM: Round [66] log likelihood: -1938606.735633
EM: Round [67] log likelihood: -1938606.709588
EM: Round [68] log likelihood: -1938606.684705
EM: Round [69] log likelihood: -1938606.660916
EM: Round [70] log likelihood: -1938606.638161
EM: Round [71] log likelihood: -1938606.616383
EM: Round [72] log likelihood: -1938606.595527
EM: Round [73] log likelihood: -1938606.575544
EM: Round [74] log likelihood: -1938606.556387
EM: Round [75] log likelihood: -1938606.538014
EM: Round [76] log likelihood: -1938606.520383
EM: Round [77] log likelihood: -1938606.503456
EM: Round [78] log likelihood: -1938606.487197
EM: Round [79] log likelihood: -1938606.471573
EM: Round [80] log likelihood: -1938606.456552
EM: Round [81] log likelihood: -1938606.442105
EM: Round [82] log likelihood: -1938606.428204
EM: Round [83] log likelihood: -1938606.414823
EM: Round [84] log likelihood: -1938606.401938
EM: Round [85] log likelihood: -1938606.389524
EM: Round [86] log likelihood: -1938606.377561
EM: Round [87] log likelihood: -1938606.366027
EM: Round [88] log likelihood: -1938606.354903
EM: Round [89] log likelihood: -1938606.344172
EM: Round [90] log likelihood: -1938606.333814
EM: Round [91] log likelihood: -1938606.323815
EM: Round [92] log likelihood: -1938606.314159
EM: Round [93] log likelihood: -1938606.304830
EM: Round [94] log likelihood: -1938606.295815
EM: Round [95] log likelihood: -1938606.287101
EM: Round [96] log likelihood: -1938606.278675
EM: Round [97] log likelihood: -1938606.270526
EM: Round [98] log likelihood: -1938606.262641
EM: Round [99] log likelihood: -1938606.255011
EM: Round [100] log likelihood: -1938606.247625
EM: Round [101] log likelihood: -1938606.240474
EM: Round [102] log likelihood: -1938606.233548
EM: Round [103] log likelihood: -1938606.226839
EM: Round [104] log likelihood: -1938606.220338
EM: Round [105] log likelihood: -1938606.214037
EM: Round [106] log likelihood: -1938606.207929
EM: Round [107] log likelihood: -1938606.202007
EM: Round [108] log likelihood: -1938606.196263
EM: Round [109] log likelihood: -1938606.190691
EM: Round [110] log likelihood: -1938606.185284
EM: Round [111] log likelihood: -1938606.180038
EM: Round [112] log likelihood: -1938606.174946
EM: Round [113] log likelihood: -1938606.170002
EM: Round [114] log likelihood: -1938606.165201
EM: Round [115] log likelihood: -1938606.160539
EM: Round [116] log likelihood: -1938606.156010
EM: Round [117] log likelihood: -1938606.151610
EM: Round [118] log likelihood: -1938606.147334
EM: Round [119] log likelihood: -1938606.143179
EM: Round [120] log likelihood: -1938606.139140
EM: Round [121] log likelihood: -1938606.135213
EM: Round [122] log likelihood: -1938606.131394
EM: Round [123] log likelihood: -1938606.127681
EM: Round [124] log likelihood: -1938606.124069
EM: Round [125] log likelihood: -1938606.120556
EM: Round [126] log likelihood: -1938606.117137
EM: Round [127] log likelihood: -1938606.113811
EM: Round [128] log likelihood: -1938606.110573
EM: Round [129] log likelihood: -1938606.107422
EM: Round [130] log likelihood: -1938606.104354
EM: Round [131] log likelihood: -1938606.101368
EM: Round [132] log likelihood: -1938606.098459
EM: Round [133] log likelihood: -1938606.095627
EM: Round [134] log likelihood: -1938606.092869
EM: Round [135] log likelihood: -1938606.090182
EM: Round [136] log likelihood: -1938606.087564
EM: Round [137] log likelihood: -1938606.085013
EM: Round [138] log likelihood: -1938606.082528
EM: Round [139] log likelihood: -1938606.080105
EM: Round [140] log likelihood: -1938606.077744
EM: Round [141] log likelihood: -1938606.075443
EM: Round [142] log likelihood: -1938606.073200
EM: Round [143] log likelihood: -1938606.071012
EM: Round [144] log likelihood: -1938606.068879
EM: Round [145] log likelihood: -1938606.066800
EM: Round [146] log likelihood: -1938606.064771
EM: Round [147] log likelihood: -1938606.062793
EM: Round [148] log likelihood: -1938606.060863
EM: Round [149] log likelihood: -1938606.058980
EM: Round [150] log likelihood: -1938606.057143
EM: Round [151] log likelihood: -1938606.055350
EM: Round [152] log likelihood: -1938606.053601
EM: Round [153] log likelihood: -1938606.051894
EM: Round [154] log likelihood: -1938606.050228
EM: Round [155] log likelihood: -1938606.048602
EM: Round [156] log likelihood: -1938606.047015
EM: Round [157] log likelihood: -1938606.045465
EM: Round [158] log likelihood: -1938606.043952
EM: Round [159] log likelihood: -1938606.042474
EM: Round [160] log likelihood: -1938606.041032
EM: Round [161] log likelihood: -1938606.039623
EM: Round [162] log likelihood: -1938606.038247
EM: Round [163] log likelihood: -1938606.036903
EM: Round [164] log likelihood: -1938606.035591
EM: Round [165] log likelihood: -1938606.034308
EM: Round [166] log likelihood: -1938606.033055
EM: Round [167] log likelihood: -1938606.031831
EM: Round [168] log likelihood: -1938606.030636
EM: Round [169] log likelihood: -1938606.029467
EM: Round [170] log likelihood: -1938606.028325
EM: Round [171] log likelihood: -1938606.027209
EM: Round [172] log likelihood: -1938606.026118
EM: Round [173] log likelihood: -1938606.025052
EM: Round [174] log likelihood: -1938606.024010
EM: Round [175] log likelihood: -1938606.022991
EM: Round [176] log likelihood: -1938606.021995
EM: Round [177] log likelihood: -1938606.021022
EM: Round [178] log likelihood: -1938606.020070
EM: Round [179] log likelihood: -1938606.019139
EM: Round [180] log likelihood: -1938606.018228
EM: Round [181] log likelihood: -1938606.017338
EM: Round [182] log likelihood: -1938606.016468
EM: Round [183] log likelihood: -1938606.015616
EM: Round [184] log likelihood: -1938606.014783
EM: Round [185] log likelihood: -1938606.013969
EM: Round [186] log likelihood: -1938606.013172
EM: Round [187] log likelihood: -1938606.012392
EM: Round [188] log likelihood: -1938606.011629
EM: Round [189] log likelihood: -1938606.010883
EM: Round [190] log likelihood: -1938606.010153
EM: Round [191] log likelihood: -1938606.009439
EM: Round [192] log likelihood: -1938606.008739
EM: Round [193] log likelihood: -1938606.008055
EM: Round [194] log likelihood: -1938606.007386
EM: Round [195] log likelihood: -1938606.006730
EM: Round [196] log likelihood: -1938606.006089
EM: Round [197] log likelihood: -1938606.005461
EM: Round [198] log likelihood: -1938606.004846
EM: Round [199] log likelihood: -1938606.004245
EM: Round [200] log likelihood: -1938606.003656
EM: Round [201] log likelihood: -1938606.003079
EM: Round [202] log likelihood: -1938606.002515
EM: Round [203] log likelihood: -1938606.001962
EM: Round [204] log likelihood: -1938606.001421
EM: Round [205] log likelihood: -1938606.000891
EM: Round [206] log likelihood: -1938606.000372
EM: Round [207] log likelihood: -1938605.999863
EM: Round [208] log likelihood: -1938605.999365
EM: Round [209] log likelihood: -1938605.998878
EM: Round [210] log likelihood: -1938605.998400
EM: Round [211] log likelihood: -1938605.997932
EM: Round [212] log likelihood: -1938605.997474
EM: Round [213] log likelihood: -1938605.997025
EM: Round [214] log likelihood: -1938605.996585
EM: Round [215] log likelihood: -1938605.996155
EM: Round [216] log likelihood: -1938605.995732
EM: Round [217] log likelihood: -1938605.995319
EM: Round [218] log likelihood: -1938605.994913
EM: Round [219] log likelihood: -1938605.994516
EM: Round [220] log likelihood: -1938605.994127
EM: Round [221] log likelihood: -1938605.993746
EM: Round [222] log likelihood: -1938605.993372
EM: Round [223] log likelihood: -1938605.993006
EM: Round [224] log likelihood: -1938605.992647
EM: Round [225] log likelihood: -1938605.992295
EM: Round [226] log likelihood: -1938605.991950
EM: Round [227] log likelihood: -1938605.991611
EM: Round [228] log likelihood: -1938605.991280
EM: Round [229] log likelihood: -1938605.990955
EM: Round [230] log likelihood: -1938605.990636
EM: Round [231] log likelihood: -1938605.990324
EM: Round [232] log likelihood: -1938605.990018
EM: Round [233] log likelihood: -1938605.989717
EM: Round [234] log likelihood: -1938605.989423
EM: Round [235] log likelihood: -1938605.989134
EM: Round [236] log likelihood: -1938605.988851
EM: Round [237] log likelihood: -1938605.988573
EM: Round [238] log likelihood: -1938605.988301
EM: Round [239] log likelihood: -1938605.988033
EM: Round [240] log likelihood: -1938605.987771
EM: Round [241] log likelihood: -1938605.987514
EM: Round [242] log likelihood: -1938605.987262
EM: Round [243] log likelihood: -1938605.987015
EM: Round [244] log likelihood: -1938605.986772
EM: Round [245] log likelihood: -1938605.986534
EM: Round [246] log likelihood: -1938605.986301
EM: Round [247] log likelihood: -1938605.986071
EM: Round [248] log likelihood: -1938605.985847
EM: Round [249] log likelihood: -1938605.985626
EM: Round [250] log likelihood: -1938605.985409
EM: Round [251] log likelihood: -1938605.985197
EM: Round [252] log likelihood: -1938605.984989
EM: Round [253] log likelihood: -1938605.984784
EM: Round [254] log likelihood: -1938605.984583
EM: Round [255] log likelihood: -1938605.984386
EM: Round [256] log likelihood: -1938605.984193
EM: Round [257] log likelihood: -1938605.984003
EM: Round [258] log likelihood: -1938605.983816
EM: Round [259] log likelihood: -1938605.983633
EM: Round [260] log likelihood: -1938605.983454
EM: Round [261] log likelihood: -1938605.983277
EM: Round [262] log likelihood: -1938605.983104
EM: Round [263] log likelihood: -1938605.982934
EM: Round [264] log likelihood: -1938605.982767
EM: Round [265] log likelihood: -1938605.982603
EM: Round [266] log likelihood: -1938605.982442
EM: Round [267] log likelihood: -1938605.982284
EM: Round [268] log likelihood: -1938605.982129
EM: Round [269] log likelihood: -1938605.981977
EM: Round [270] log likelihood: -1938605.981827
EM: Round [271] log likelihood: -1938605.981680
EM: Round [272] log likelihood: -1938605.981536
EM: Round [273] log likelihood: -1938605.981394
EM: Round [274] log likelihood: -1938605.981254
EM: Round [275] log likelihood: -1938605.981118
EM: Round [276] log likelihood: -1938605.980983
EM: Round [277] log likelihood: -1938605.980851
EM: Round [278] log likelihood: -1938605.980721
EM: Round [279] log likelihood: -1938605.980594
EM: Round [280] log likelihood: -1938605.980468
EM: Round [281] log likelihood: -1938605.980345
EM: Round [282] log likelihood: -1938605.980224
EM: Round [283] log likelihood: -1938605.980105
EM: Round [284] log likelihood: -1938605.979988
EM: Round [285] log likelihood: -1938605.979874
EM: Round [286] log likelihood: -1938605.979761
EM: Round [287] log likelihood: -1938605.979650
EM: Round [288] log likelihood: -1938605.979541
EM: Round [289] log likelihood: -1938605.979434
EM: Round [290] log likelihood: -1938605.979328
EM: Round [291] log likelihood: -1938605.979225
EM: Round [292] log likelihood: -1938605.979123
EM: Round [293] log likelihood: -1938605.979023
EM: Round [294] log likelihood: -1938605.978924
EM: Stopping iterations at round 294 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -1930595.925074
EM: Round [1] log likelihood: -1929857.110391
EM: Round [2] log likelihood: -1929646.322792
EM: Round [3] log likelihood: -1929554.904031
EM: Round [4] log likelihood: -1929508.137500
EM: Round [5] log likelihood: -1929482.145968
EM: Round [6] log likelihood: -1929466.856317
EM: Round [7] log likelihood: -1929457.405900
EM: Round [8] log likelihood: -1929451.284767
EM: Round [9] log likelihood: -1929447.140654
EM: Round [10] log likelihood: -1929444.218565
EM: Round [11] log likelihood: -1929442.082207
EM: Round [12] log likelihood: -1929440.470497
EM: Round [13] log likelihood: -1929439.221583
EM: Round [14] log likelihood: -1929438.231581
EM: Round [15] log likelihood: -1929437.431571
EM: Round [16] log likelihood: -1929436.774408
EM: Round [17] log likelihood: -1929436.226943
EM: Round [18] log likelihood: -1929435.765281
EM: Round [19] log likelihood: -1929435.371824
EM: Round [20] log likelihood: -1929435.033354
EM: Round [21] log likelihood: -1929434.739771
EM: Round [22] log likelihood: -1929434.483239
EM: Round [23] log likelihood: -1929434.257592
EM: Round [24] log likelihood: -1929434.057919
EM: Round [25] log likelihood: -1929433.880263
EM: Round [26] log likelihood: -1929433.721404
EM: Round [27] log likelihood: -1929433.578696
EM: Round [28] log likelihood: -1929433.449947
EM: Round [29] log likelihood: -1929433.333329
EM: Round [30] log likelihood: -1929433.227305
EM: Round [31] log likelihood: -1929433.130574
EM: Round [32] log likelihood: -1929433.042032
EM: Round [33] log likelihood: -1929432.960735
EM: Round [34] log likelihood: -1929432.885869
EM: Round [35] log likelihood: -1929432.816736
EM: Round [36] log likelihood: -1929432.752729
EM: Round [37] log likelihood: -1929432.693319
EM: Round [38] log likelihood: -1929432.638047
EM: Round [39] log likelihood: -1929432.586510
EM: Round [40] log likelihood: -1929432.538352
EM: Round [41] log likelihood: -1929432.493262
EM: Round [42] log likelihood: -1929432.450964
EM: Round [43] log likelihood: -1929432.411213
EM: Round [44] log likelihood: -1929432.373791
EM: Round [45] log likelihood: -1929432.338505
EM: Round [46] log likelihood: -1929432.305181
EM: Round [47] log likelihood: -1929432.273664
EM: Round [48] log likelihood: -1929432.243815
EM: Round [49] log likelihood: -1929432.215509
EM: Round [50] log likelihood: -1929432.188632
EM: Round [51] log likelihood: -1929432.163082
EM: Round [52] log likelihood: -1929432.138766
EM: Round [53] log likelihood: -1929432.115601
EM: Round [54] log likelihood: -1929432.093509
EM: Round [55] log likelihood: -1929432.072422
EM: Round [56] log likelihood: -1929432.052274
EM: Round [57] log likelihood: -1929432.033009
EM: Round [58] log likelihood: -1929432.014572
EM: Round [59] log likelihood: -1929431.996914
EM: Round [60] log likelihood: -1929431.979990
EM: Round [61] log likelihood: -1929431.963758
EM: Round [62] log likelihood: -1929431.948180
EM: Round [63] log likelihood: -1929431.933220
EM: Round [64] log likelihood: -1929431.918844
EM: Round [65] log likelihood: -1929431.905023
EM: Round [66] log likelihood: -1929431.891727
EM: Round [67] log likelihood: -1929431.878930
EM: Round [68] log likelihood: -1929431.866608
EM: Round [69] log likelihood: -1929431.854737
EM: Round [70] log likelihood: -1929431.843295
EM: Round [71] log likelihood: -1929431.832262
EM: Round [72] log likelihood: -1929431.821620
EM: Round [73] log likelihood: -1929431.811350
EM: Round [74] log likelihood: -1929431.801436
EM: Round [75] log likelihood: -1929431.791861
EM: Round [76] log likelihood: -1929431.782612
EM: Round [77] log likelihood: -1929431.773673
EM: Round [78] log likelihood: -1929431.765032
EM: Round [79] log likelihood: -1929431.756677
EM: Round [80] log likelihood: -1929431.748595
EM: Round [81] log likelihood: -1929431.740775
EM: Round [82] log likelihood: -1929431.733207
EM: Round [83] log likelihood: -1929431.725881
EM: Round [84] log likelihood: -1929431.718787
EM: Round [85] log likelihood: -1929431.711915
EM: Round [86] log likelihood: -1929431.705259
EM: Round [87] log likelihood: -1929431.698808
EM: Round [88] log likelihood: -1929431.692555
EM: Round [89] log likelihood: -1929431.686494
EM: Round [90] log likelihood: -1929431.680616
EM: Round [91] log likelihood: -1929431.674916
EM: Round [92] log likelihood: -1929431.669386
EM: Round [93] log likelihood: -1929431.664021
EM: Round [94] log likelihood: -1929431.658814
EM: Round [95] log likelihood: -1929431.653760
EM: Round [96] log likelihood: -1929431.648853
EM: Round [97] log likelihood: -1929431.644089
EM: Round [98] log likelihood: -1929431.639463
EM: Round [99] log likelihood: -1929431.634969
EM: Round [100] log likelihood: -1929431.630603
EM: Round [101] log likelihood: -1929431.626362
EM: Round [102] log likelihood: -1929431.622240
EM: Round [103] log likelihood: -1929431.618233
EM: Round [104] log likelihood: -1929431.614338
EM: Round [105] log likelihood: -1929431.610552
EM: Round [106] log likelihood: -1929431.606870
EM: Round [107] log likelihood: -1929431.603289
EM: Round [108] log likelihood: -1929431.599807
EM: Round [109] log likelihood: -1929431.596418
EM: Round [110] log likelihood: -1929431.593122
EM: Round [111] log likelihood: -1929431.589915
EM: Round [112] log likelihood: -1929431.586793
EM: Round [113] log likelihood: -1929431.583755
EM: Round [114] log likelihood: -1929431.580798
EM: Round [115] log likelihood: -1929431.577919
EM: Round [116] log likelihood: -1929431.575115
EM: Round [117] log likelihood: -1929431.572385
EM: Round [118] log likelihood: -1929431.569727
EM: Round [119] log likelihood: -1929431.567137
EM: Round [120] log likelihood: -1929431.564615
EM: Round [121] log likelihood: -1929431.562157
EM: Round [122] log likelihood: -1929431.559762
EM: Round [123] log likelihood: -1929431.557429
EM: Round [124] log likelihood: -1929431.555155
EM: Round [125] log likelihood: -1929431.552938
EM: Round [126] log likelihood: -1929431.550778
EM: Round [127] log likelihood: -1929431.548672
EM: Round [128] log likelihood: -1929431.546618
EM: Round [129] log likelihood: -1929431.544616
EM: Round [130] log likelihood: -1929431.542663
EM: Round [131] log likelihood: -1929431.540759
EM: Round [132] log likelihood: -1929431.538901
EM: Round [133] log likelihood: -1929431.537089
EM: Round [134] log likelihood: -1929431.535322
EM: Round [135] log likelihood: -1929431.533597
EM: Round [136] log likelihood: -1929431.531915
EM: Round [137] log likelihood: -1929431.530273
EM: Round [138] log likelihood: -1929431.528670
EM: Round [139] log likelihood: -1929431.527106
EM: Round [140] log likelihood: -1929431.525580
EM: Round [141] log likelihood: -1929431.524090
EM: Round [142] log likelihood: -1929431.522635
EM: Round [143] log likelihood: -1929431.521215
EM: Round [144] log likelihood: -1929431.519828
EM: Round [145] log likelihood: -1929431.518474
EM: Round [146] log likelihood: -1929431.517151
EM: Round [147] log likelihood: -1929431.515859
EM: Round [148] log likelihood: -1929431.514598
EM: Round [149] log likelihood: -1929431.513366
EM: Round [150] log likelihood: -1929431.512162
EM: Round [151] log likelihood: -1929431.510986
EM: Round [152] log likelihood: -1929431.509837
EM: Round [153] log likelihood: -1929431.508714
EM: Round [154] log likelihood: -1929431.507617
EM: Round [155] log likelihood: -1929431.506545
EM: Round [156] log likelihood: -1929431.505497
EM: Round [157] log likelihood: -1929431.504473
EM: Round [158] log likelihood: -1929431.503472
EM: Round [159] log likelihood: -1929431.502493
EM: Round [160] log likelihood: -1929431.501536
EM: Round [161] log likelihood: -1929431.500601
EM: Round [162] log likelihood: -1929431.499686
EM: Round [163] log likelihood: -1929431.498792
EM: Round [164] log likelihood: -1929431.497918
EM: Round [165] log likelihood: -1929431.497063
EM: Round [166] log likelihood: -1929431.496226
EM: Round [167] log likelihood: -1929431.495408
EM: Round [168] log likelihood: -1929431.494608
EM: Round [169] log likelihood: -1929431.493826
EM: Round [170] log likelihood: -1929431.493060
EM: Round [171] log likelihood: -1929431.492311
EM: Round [172] log likelihood: -1929431.491579
EM: Round [173] log likelihood: -1929431.490862
EM: Round [174] log likelihood: -1929431.490160
EM: Round [175] log likelihood: -1929431.489474
EM: Round [176] log likelihood: -1929431.488802
EM: Round [177] log likelihood: -1929431.488144
EM: Round [178] log likelihood: -1929431.487501
EM: Round [179] log likelihood: -1929431.486871
EM: Round [180] log likelihood: -1929431.486255
EM: Round [181] log likelihood: -1929431.485651
EM: Round [182] log likelihood: -1929431.485060
EM: Round [183] log likelihood: -1929431.484482
EM: Round [184] log likelihood: -1929431.483916
EM: Round [185] log likelihood: -1929431.483361
EM: Round [186] log likelihood: -1929431.482818
EM: Round [187] log likelihood: -1929431.482287
EM: Round [188] log likelihood: -1929431.481766
EM: Round [189] log likelihood: -1929431.481256
EM: Round [190] log likelihood: -1929431.480757
EM: Round [191] log likelihood: -1929431.480268
EM: Round [192] log likelihood: -1929431.479789
EM: Round [193] log likelihood: -1929431.479320
EM: Round [194] log likelihood: -1929431.478860
EM: Round [195] log likelihood: -1929431.478410
EM: Round [196] log likelihood: -1929431.477969
EM: Round [197] log likelihood: -1929431.477537
EM: Round [198] log likelihood: -1929431.477113
EM: Round [199] log likelihood: -1929431.476698
EM: Round [200] log likelihood: -1929431.476292
EM: Round [201] log likelihood: -1929431.475894
EM: Round [202] log likelihood: -1929431.475503
EM: Round [203] log likelihood: -1929431.475120
EM: Round [204] log likelihood: -1929431.474745
EM: Round [205] log likelihood: -1929431.474378
EM: Round [206] log likelihood: -1929431.474018
EM: Round [207] log likelihood: -1929431.473665
EM: Round [208] log likelihood: -1929431.473318
EM: Round [209] log likelihood: -1929431.472979
EM: Round [210] log likelihood: -1929431.472646
EM: Round [211] log likelihood: -1929431.472320
EM: Round [212] log likelihood: -1929431.472000
EM: Round [213] log likelihood: -1929431.471687
EM: Round [214] log likelihood: -1929431.471379
EM: Round [215] log likelihood: -1929431.471078
EM: Round [216] log likelihood: -1929431.470782
EM: Round [217] log likelihood: -1929431.470492
EM: Round [218] log likelihood: -1929431.470208
EM: Round [219] log likelihood: -1929431.469929
EM: Round [220] log likelihood: -1929431.469656
EM: Round [221] log likelihood: -1929431.469387
EM: Round [222] log likelihood: -1929431.469124
EM: Round [223] log likelihood: -1929431.468866
EM: Round [224] log likelihood: -1929431.468613
EM: Round [225] log likelihood: -1929431.468364
EM: Round [226] log likelihood: -1929431.468120
EM: Round [227] log likelihood: -1929431.467881
EM: Round [228] log likelihood: -1929431.467646
EM: Round [229] log likelihood: -1929431.467416
EM: Round [230] log likelihood: -1929431.467190
EM: Round [231] log likelihood: -1929431.466968
EM: Round [232] log likelihood: -1929431.466751
EM: Round [233] log likelihood: -1929431.466537
EM: Round [234] log likelihood: -1929431.466328
EM: Round [235] log likelihood: -1929431.466122
EM: Round [236] log likelihood: -1929431.465920
EM: Round [237] log likelihood: -1929431.465722
EM: Round [238] log likelihood: -1929431.465527
EM: Round [239] log likelihood: -1929431.465336
EM: Round [240] log likelihood: -1929431.465149
EM: Round [241] log likelihood: -1929431.464965
EM: Round [242] log likelihood: -1929431.464784
EM: Round [243] log likelihood: -1929431.464606
EM: Round [244] log likelihood: -1929431.464432
EM: Round [245] log likelihood: -1929431.464261
EM: Round [246] log likelihood: -1929431.464093
EM: Round [247] log likelihood: -1929431.463928
EM: Round [248] log likelihood: -1929431.463766
EM: Round [249] log likelihood: -1929431.463607
EM: Round [250] log likelihood: -1929431.463451
EM: Round [251] log likelihood: -1929431.463297
EM: Round [252] log likelihood: -1929431.463146
EM: Round [253] log likelihood: -1929431.462998
EM: Round [254] log likelihood: -1929431.462853
EM: Round [255] log likelihood: -1929431.462710
EM: Round [256] log likelihood: -1929431.462569
EM: Round [257] log likelihood: -1929431.462431
EM: Round [258] log likelihood: -1929431.462296
EM: Round [259] log likelihood: -1929431.462162
EM: Round [260] log likelihood: -1929431.462032
EM: Round [261] log likelihood: -1929431.461903
EM: Round [262] log likelihood: -1929431.461777
EM: Round [263] log likelihood: -1929431.461652
EM: Round [264] log likelihood: -1929431.461530
EM: Round [265] log likelihood: -1929431.461410
EM: Round [266] log likelihood: -1929431.461292
EM: Round [267] log likelihood: -1929431.461177
EM: Round [268] log likelihood: -1929431.461063
EM: Round [269] log likelihood: -1929431.460951
EM: Round [270] log likelihood: -1929431.460841
EM: Round [271] log likelihood: -1929431.460732
EM: Round [272] log likelihood: -1929431.460626
EM: Round [273] log likelihood: -1929431.460521
EM: Round [274] log likelihood: -1929431.460418
EM: Round [275] log likelihood: -1929431.460317
EM: Round [276] log likelihood: -1929431.460218
EM: Stopping iterations at round 276 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.9qMYLVQT2C/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.9qMYLVQT2C/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.9qMYLVQT2C/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 293729159 > /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.9qMYLVQT2C/ctat_genome_lib_build_dir > /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.9qMYLVQT2C/ctat_genome_lib_build_dir --annotate /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.9qMYLVQT2C/ctat_genome_lib_build_dir
-done, see /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.9qMYLVQT2C/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1015, filtered: 7587)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.9qMYLVQT2C/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.9qMYLVQT2C/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000250251.6]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000246379.8]
WARNING, no entry stored in dbm for [ENSG00000243753.5]
WARNING, no entry stored in dbm for [ENSG00000181126.13]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000231028.9]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000231028.9]
WARNING, no entry stored in dbm for [ENSG00000245958.6]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000286387.1]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000241104.5]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000272693.4]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000232894.1]
WARNING, no entry stored in dbm for [ENSG00000203413.3]
WARNING, no entry stored in dbm for [ENSG00000258017.2]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000241350.1]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000241278.1]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000284977.2]
WARNING, no entry stored in dbm for [ENSG00000230681.1]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000272009.1]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000235519.3]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000215002.2]
WARNING, no entry stored in dbm for [ENSG00000269244.1]
WARNING, no entry stored in dbm for [ENSG00000248699.1]
WARNING, no entry stored in dbm for [ENSG00000230510.7]
WARNING, no entry stored in dbm for [ENSG00000230510.7]
WARNING, no entry stored in dbm for [ENSG00000278665.1]
WARNING, no entry stored in dbm for [ENSG00000281450.1]
WARNING, no entry stored in dbm for [ENSG00000269352.1]
WARNING, no entry stored in dbm for [ENSG00000260005.6]
WARNING, no entry stored in dbm for [ENSG00000286675.1]
WARNING, no entry stored in dbm for [ENSG00000246082.2]
WARNING, no entry stored in dbm for [ENSG00000232829.3]
WARNING, no entry stored in dbm for [ENSG00000249353.2]
WARNING, no entry stored in dbm for [ENSG00000266242.1]
WARNING, no entry stored in dbm for [ENSG00000284129.1]
WARNING, no entry stored in dbm for [ENSG00000213592.4]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000256802.2]
WARNING, no entry stored in dbm for [ENSG00000233576.1]
WARNING, no entry stored in dbm for [ENSG00000198414.5]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000287701.1]
WARNING, no entry stored in dbm for [ENSG00000232327.4]
WARNING, no entry stored in dbm for [ENSG00000284129.1]
WARNING, no entry stored in dbm for [ENSG00000244021.4]
WARNING, no entry stored in dbm for [ENSG00000241251.2]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000257639.1]
WARNING, no entry stored in dbm for [ENSG00000237004.4]
WARNING, no entry stored in dbm for [ENSG00000284605.1]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000233593.10]
WARNING, no entry stored in dbm for [ENSG00000220949.2]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000268516.2]
WARNING, no entry stored in dbm for [ENSG00000287664.1]
WARNING, no entry stored in dbm for [ENSG00000286385.1]
WARNING, no entry stored in dbm for [ENSG00000241015.2]
WARNING, no entry stored in dbm for [ENSG00000263189.1]
WARNING, no entry stored in dbm for [ENSG00000197291.9]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000225178.5]
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WARNING, no entry stored in dbm for [ENSG00000226210.3]
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WARNING, no entry stored in dbm for [ENSG00000256847.1]
WARNING, no entry stored in dbm for [ENSG00000259393.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000228639.8]
WARNING, no entry stored in dbm for [ENSG00000279910.1]
WARNING, no entry stored in dbm for [ENSG00000217770.1]
WARNING, no entry stored in dbm for [ENSG00000251652.1]
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WARNING, no entry stored in dbm for [ENSG00000252205.1]
WARNING, no entry stored in dbm for [ENSG00000234312.1]
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WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000234770.1]
WARNING, no entry stored in dbm for [ENSG00000288638.1]
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WARNING, no entry stored in dbm for [ENSG00000223745.8]
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WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000261693.1]
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WARNING, no entry stored in dbm for [ENSG00000224061.1]
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WARNING, no entry stored in dbm for [ENSG00000225823.1]
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WARNING, no entry stored in dbm for [ENSG00000241291.3]
WARNING, no entry stored in dbm for [ENSG00000244610.3]
WARNING, no entry stored in dbm for [ENSG00000272734.1]
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WARNING, no entry stored in dbm for [ENSG00000258186.2]
WARNING, no entry stored in dbm for [ENSG00000224081.9]
WARNING, no entry stored in dbm for [ENSG00000257067.6]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000247699.2]
WARNING, no entry stored in dbm for [ENSG00000259150.6]
WARNING, no entry stored in dbm for [ENSG00000237211.2]
WARNING, no entry stored in dbm for [ENSG00000256827.1]
WARNING, no entry stored in dbm for [ENSG00000227964.1]
WARNING, no entry stored in dbm for [ENSG00000285685.1]
WARNING, no entry stored in dbm for [ENSG00000243782.3]
WARNING, no entry stored in dbm for [ENSG00000239471.3]
WARNING, no entry stored in dbm for [ENSG00000239703.3]
WARNING, no entry stored in dbm for [ENSG00000239211.3]
WARNING, no entry stored in dbm for [ENSG00000243059.3]
WARNING, no entry stored in dbm for [ENSG00000239948.2]
WARNING, no entry stored in dbm for [ENSG00000242121.3]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000253541.1]
WARNING, no entry stored in dbm for [ENSG00000272668.2]
WARNING, no entry stored in dbm for [ENSG00000281641.3]
WARNING, no entry stored in dbm for [ENSG00000272030.1]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000237169.1]
WARNING, no entry stored in dbm for [ENSG00000243824.1]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000206195.11]
WARNING, no entry stored in dbm for [ENSG00000275468.1]
WARNING, no entry stored in dbm for [ENSG00000159712.10]
WARNING, no entry stored in dbm for [ENSG00000228492.2]
WARNING, no entry stored in dbm for [ENSG00000287816.1]
WARNING, no entry stored in dbm for [ENSG00000259948.2]
WARNING, no entry stored in dbm for [ENSG00000159712.10]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000223389.1]
WARNING, no entry stored in dbm for [ENSG00000287855.1]
WARNING, no entry stored in dbm for [ENSG00000250372.1]
WARNING, no entry stored in dbm for [ENSG00000248927.1]
WARNING, no entry stored in dbm for [ENSG00000245768.7]
WARNING, no entry stored in dbm for [ENSG00000248441.7]
WARNING, no entry stored in dbm for [ENSG00000205771.6]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000286514.1]
WARNING, no entry stored in dbm for [ENSG00000274602.5]
WARNING, no entry stored in dbm for [ENSG00000179899.8]
WARNING, no entry stored in dbm for [ENSG00000227893.1]
WARNING, no entry stored in dbm for [ENSG00000288530.1]
WARNING, no entry stored in dbm for [ENSG00000227070.1]
WARNING, no entry stored in dbm for [ENSG00000284809.1]
WARNING, no entry stored in dbm for [ENSG00000273234.1]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000286597.1]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000266379.6]
WARNING, no entry stored in dbm for [ENSG00000260617.1]
WARNING, no entry stored in dbm for [ENSG00000226232.8]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000248092.8]
WARNING, no entry stored in dbm for [ENSG00000219410.6]
WARNING, no entry stored in dbm for [ENSG00000229344.1]
WARNING, no entry stored in dbm for [ENSG00000240498.9]
WARNING, no entry stored in dbm for [ENSG00000210127.1]
WARNING, no entry stored in dbm for [ENSG00000232759.1]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000253366.3]
WARNING, no entry stored in dbm for [ENSG00000286532.1]
WARNING, no entry stored in dbm for [ENSG00000267374.2]
WARNING, no entry stored in dbm for [ENSG00000284008.1]
WARNING, no entry stored in dbm for [ENSG00000239390.3]
WARNING, no entry stored in dbm for [ENSG00000284008.1]
WARNING, no entry stored in dbm for [ENSG00000244264.3]
WARNING, no entry stored in dbm for [ENSG00000259240.1]
WARNING, no entry stored in dbm for [ENSG00000224184.6]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000186594.14]
WARNING, no entry stored in dbm for [ENSG00000255248.9]
WARNING, no entry stored in dbm for [ENSG00000236552.2]
WARNING, no entry stored in dbm for [ENSG00000286880.1]
WARNING, no entry stored in dbm for [ENSG00000229281.1]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000266605.1]
WARNING, no entry stored in dbm for [ENSG00000237023.1]
WARNING, no entry stored in dbm for [ENSG00000251432.7]
WARNING, no entry stored in dbm for [ENSG00000258733.6]
WARNING, no entry stored in dbm for [ENSG00000258733.6]
WARNING, no entry stored in dbm for [ENSG00000249937.8]
WARNING, no entry stored in dbm for [ENSG00000262188.2]
WARNING, no entry stored in dbm for [ENSG00000236008.3]
WARNING, no entry stored in dbm for [ENSG00000146521.10]
WARNING, no entry stored in dbm for [ENSG00000237339.5]
WARNING, no entry stored in dbm for [ENSG00000231346.5]
WARNING, no entry stored in dbm for [ENSG00000219410.6]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000266256.3]
WARNING, no entry stored in dbm for [ENSG00000237945.7]
WARNING, no entry stored in dbm for [ENSG00000231061.1]
WARNING, no entry stored in dbm for [ENSG00000225328.2]
WARNING, no entry stored in dbm for [ENSG00000260807.7]
WARNING, no entry stored in dbm for [ENSG00000258828.2]
WARNING, no entry stored in dbm for [ENSG00000257528.1]
WARNING, no entry stored in dbm for [ENSG00000187686.4]
WARNING, no entry stored in dbm for [ENSG00000228666.1]
WARNING, no entry stored in dbm for [ENSG00000242473.1]
WARNING, no entry stored in dbm for [ENSG00000285735.2]
WARNING, no entry stored in dbm for [ENSG00000277142.1]
WARNING, no entry stored in dbm for [ENSG00000267532.5]
WARNING, no entry stored in dbm for [ENSG00000288002.1]
WARNING, no entry stored in dbm for [ENSG00000261620.1]
WARNING, no entry stored in dbm for [ENSG00000227259.2]
WARNING, no entry stored in dbm for [ENSG00000215283.3]
WARNING, no entry stored in dbm for [ENSG00000255391.1]
WARNING, no entry stored in dbm for [ENSG00000280245.1]
WARNING, no entry stored in dbm for [ENSG00000242294.6]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000226222.3]
WARNING, no entry stored in dbm for [ENSG00000277053.4]
WARNING, no entry stored in dbm for [ENSG00000228203.7]
WARNING, no entry stored in dbm for [ENSG00000286068.1]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000280208.1]
WARNING, no entry stored in dbm for [ENSG00000248290.1]
WARNING, no entry stored in dbm for [ENSG00000216624.3]
WARNING, no entry stored in dbm for [ENSG00000228232.1]
WARNING, no entry stored in dbm for [ENSG00000250934.2]
WARNING, no entry stored in dbm for [ENSG00000244879.8]
WARNING, no entry stored in dbm for [ENSG00000255471.1]
WARNING, no entry stored in dbm for [ENSG00000221819.6]
WARNING, no entry stored in dbm for [ENSG00000228876.4]
WARNING, no entry stored in dbm for [ENSG00000257126.6]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000229983.1]
WARNING, no entry stored in dbm for [ENSG00000279253.1]
WARNING, no entry stored in dbm for [ENSG00000271032.1]
WARNING, no entry stored in dbm for [ENSG00000125804.14]
WARNING, no entry stored in dbm for [ENSG00000279630.1]
WARNING, no entry stored in dbm for [ENSG00000254571.1]
WARNING, no entry stored in dbm for [ENSG00000240137.6]
WARNING, no entry stored in dbm for [ENSG00000250929.2]
WARNING, no entry stored in dbm for [ENSG00000251393.4]
WARNING, no entry stored in dbm for [ENSG00000182397.14]
WARNING, no entry stored in dbm for [ENSG00000286572.1]
WARNING, no entry stored in dbm for [ENSG00000267432.6]
WARNING, no entry stored in dbm for [ENSG00000231672.8]
WARNING, no entry stored in dbm for [ENSG00000272967.1]
WARNING, no entry stored in dbm for [ENSG00000273311.1]
WARNING, no entry stored in dbm for [ENSG00000218748.1]
WARNING, no entry stored in dbm for [ENSG00000242808.10]
WARNING, no entry stored in dbm for [ENSG00000161912.18]
WARNING, no entry stored in dbm for [ENSG00000278903.3]
WARNING, no entry stored in dbm for [ENSG00000253859.2]
WARNING, no entry stored in dbm for [ENSG00000249201.2]
WARNING, no entry stored in dbm for [ENSG00000213963.6]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000254285.3]
WARNING, no entry stored in dbm for [ENSG00000078319.10]
WARNING, no entry stored in dbm for [ENSG00000225393.1]
WARNING, no entry stored in dbm for [ENSG00000259020.3]
WARNING, no entry stored in dbm for [ENSG00000270490.1]
WARNING, no entry stored in dbm for [ENSG00000237002.6]
WARNING, no entry stored in dbm for [ENSG00000232044.7]
WARNING, no entry stored in dbm for [ENSG00000203362.2]
WARNING, no entry stored in dbm for [ENSG00000223773.7]
WARNING, no entry stored in dbm for [ENSG00000215039.7]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000260942.1]
WARNING, no entry stored in dbm for [ENSG00000201476.1]
WARNING, no entry stored in dbm for [ENSG00000252301.1]
WARNING, no entry stored in dbm for [ENSG00000200650.1]
WARNING, no entry stored in dbm for [ENSG00000223466.2]
WARNING, no entry stored in dbm for [ENSG00000259482.2]
WARNING, no entry stored in dbm for [ENSG00000268601.1]
WARNING, no entry stored in dbm for [ENSG00000231424.3]
WARNING, no entry stored in dbm for [ENSG00000286067.1]
WARNING, no entry stored in dbm for [ENSG00000260232.3]
WARNING, no entry stored in dbm for [ENSG00000206249.3]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000259685.3]
WARNING, no entry stored in dbm for [ENSG00000260163.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000267333.1]
WARNING, no entry stored in dbm for [ENSG00000213081.3]
WARNING, no entry stored in dbm for [ENSG00000245385.2]
WARNING, no entry stored in dbm for [ENSG00000254810.1]
WARNING, no entry stored in dbm for [ENSG00000254756.1]
WARNING, no entry stored in dbm for [ENSG00000272578.5]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000226721.2]
WARNING, no entry stored in dbm for [ENSG00000270906.1]
WARNING, no entry stored in dbm for [ENSG00000233928.6]
WARNING, no entry stored in dbm for [ENSG00000232295.7]
WARNING, no entry stored in dbm for [ENSG00000258903.2]
WARNING, no entry stored in dbm for [ENSG00000243960.1]
WARNING, no entry stored in dbm for [ENSG00000200131.1]
WARNING, no entry stored in dbm for [ENSG00000243960.1]
WARNING, no entry stored in dbm for [ENSG00000201010.1]
WARNING, no entry stored in dbm for [ENSG00000233514.1]
WARNING, no entry stored in dbm for [ENSG00000259162.1]
WARNING, no entry stored in dbm for [ENSG00000246203.2]
WARNING, no entry stored in dbm for [ENSG00000286699.1]
WARNING, no entry stored in dbm for [ENSG00000258656.1]
WARNING, no entry stored in dbm for [ENSG00000227240.2]
WARNING, no entry stored in dbm for [ENSG00000286546.1]
WARNING, no entry stored in dbm for [ENSG00000232310.8]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000250135.1]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000213972.3]
WARNING, no entry stored in dbm for [ENSG00000219102.3]
WARNING, no entry stored in dbm for [ENSG00000273188.1]
WARNING, no entry stored in dbm for [ENSG00000236358.1]
WARNING, no entry stored in dbm for [ENSG00000198221.10]
WARNING, no entry stored in dbm for [ENSG00000263670.1]
WARNING, no entry stored in dbm for [ENSG00000197085.11]
WARNING, no entry stored in dbm for [ENSG00000258730.1]
WARNING, no entry stored in dbm for [ENSG00000240401.9]
WARNING, no entry stored in dbm for [ENSG00000279504.1]
WARNING, no entry stored in dbm for [ENSG00000269148.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000257489.6]
WARNING, no entry stored in dbm for [ENSG00000286912.1]
WARNING, no entry stored in dbm for [ENSG00000286721.1]
WARNING, no entry stored in dbm for [ENSG00000276850.5]
WARNING, no entry stored in dbm for [ENSG00000223804.5]
WARNING, no entry stored in dbm for [ENSG00000263590.2]
WARNING, no entry stored in dbm for [ENSG00000234200.2]
WARNING, no entry stored in dbm for [ENSG00000262049.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000179571.10]
WARNING, no entry stored in dbm for [ENSG00000205452.5]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000232098.3]
WARNING, no entry stored in dbm for [ENSG00000271474.1]
WARNING, no entry stored in dbm for [ENSG00000287134.1]
WARNING, no entry stored in dbm for [ENSG00000223991.1]
WARNING, no entry stored in dbm for [ENSG00000259692.6]
WARNING, no entry stored in dbm for [ENSG00000235095.1]
WARNING, no entry stored in dbm for [ENSG00000286436.1]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000242759.8]
WARNING, no entry stored in dbm for [ENSG00000180015.12]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000279555.1]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000255094.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000243181.2]
WARNING, no entry stored in dbm for [ENSG00000224019.1]
WARNING, no entry stored in dbm for [ENSG00000283415.2]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000276170.4]
WARNING, no entry stored in dbm for [ENSG00000284627.1]
WARNING, no entry stored in dbm for [ENSG00000287839.1]
WARNING, no entry stored in dbm for [ENSG00000272844.1]
WARNING, no entry stored in dbm for [ENSG00000261096.1]
WARNING, no entry stored in dbm for [ENSG00000239985.2]
WARNING, no entry stored in dbm for [ENSG00000284613.1]
WARNING, no entry stored in dbm for [ENSG00000255367.3]
WARNING, no entry stored in dbm for [ENSG00000230796.1]
WARNING, no entry stored in dbm for [ENSG00000266365.1]
WARNING, no entry stored in dbm for [ENSG00000249328.3]
WARNING, no entry stored in dbm for [ENSG00000260894.1]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000287354.1]
WARNING, no entry stored in dbm for [ENSG00000248569.1]
WARNING, no entry stored in dbm for [ENSG00000285600.1]
WARNING, no entry stored in dbm for [ENSG00000269886.1]
WARNING, no entry stored in dbm for [ENSG00000237307.2]
WARNING, no entry stored in dbm for [ENSG00000288253.1]
WARNING, no entry stored in dbm for [ENSG00000287858.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000262712.1]
WARNING, no entry stored in dbm for [ENSG00000274499.1]
WARNING, no entry stored in dbm for [ENSG00000280594.1]
WARNING, no entry stored in dbm for [ENSG00000266957.1]
WARNING, no entry stored in dbm for [ENSG00000286864.1]
WARNING, no entry stored in dbm for [ENSG00000262420.3]
WARNING, no entry stored in dbm for [ENSG00000269495.1]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000269867.1]
WARNING, no entry stored in dbm for [ENSG00000261037.1]
WARNING, no entry stored in dbm for [ENSG00000256377.6]
WARNING, no entry stored in dbm for [ENSG00000266463.1]
WARNING, no entry stored in dbm for [ENSG00000287145.1]
WARNING, no entry stored in dbm for [ENSG00000260249.3]
WARNING, no entry stored in dbm for [ENSG00000257221.4]
WARNING, no entry stored in dbm for [ENSG00000239701.1]
WARNING, no entry stored in dbm for [ENSG00000262539.1]
WARNING, no entry stored in dbm for [ENSG00000226258.7]
WARNING, no entry stored in dbm for [ENSG00000223831.1]
WARNING, no entry stored in dbm for [ENSG00000262678.1]
WARNING, no entry stored in dbm for [ENSG00000287702.1]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000255182.2]
WARNING, no entry stored in dbm for [ENSG00000257671.1]
WARNING, no entry stored in dbm for [ENSG00000251791.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.9qMYLVQT2C/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)