Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/8c9140cdd9d7862b8fb92ac8fac69c/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/8c9140cdd9d7862b8fb92ac8fac69c/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/bbb89dc84eb9848fc0781925fb06d6/1173_SK8_T1_RNA_SLD_01_A23T55JLT4_2_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/bbb89dc84eb9848fc0781925fb06d6/1173_SK8_T1_RNA_SLD_01_A23T55JLT4_2_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/8cfc7800eadbcb8ba80dd4ad83f0c1/1173_SK8_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.Gf3M9PYNLu/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.Gf3M9PYNLu/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary
-sample contains 204206882 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.Gf3M9PYNLu/ctat_genome_lib_build_dir  -J /tmp/nxf.Gf3M9PYNLu/1173_SK8_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction  -O /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.Gf3M9PYNLu/1173_SK8_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.Gf3M9PYNLu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2450000], rate=66727.19/min -building interval tree based on /tmp/nxf.Gf3M9PYNLu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2460000], rate=59902.60/min -building interval tree based on /tmp/nxf.Gf3M9PYNLu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=66666.67/min 
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[2440000], rate=57842.75/min 
[2450000], rate=57737.63/min -building interval tree based on /tmp/nxf.Gf3M9PYNLu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=100000.00/min 
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[2450000], rate=51183.84/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.Gf3M9PYNLu/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
 12000000.00 reads per min processed...  
 18000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 7500000.00 reads per min processed...  
 5142857.14 reads per min processed...  
 4200000.00 reads per min processed...  
 3428571.43 reads per min processed...  
 3176470.59 reads per min processed...  
 3157894.74 reads per min processed...  
 3000000.00 reads per min processed...  
 2880000.00 reads per min processed...  
 2785714.29 reads per min processed...  
 2709677.42 reads per min processed...  
 2647058.82 reads per min processed...  
 2594594.59 reads per min processed...  
 2487804.88 reads per min processed...  
 2454545.45 reads per min processed...  
 2425531.91 reads per min processed...  
 2352941.18 reads per min processed...  
 2290909.09 reads per min processed...  
 2237288.14 reads per min processed...  
 2225806.45 reads per min processed...  
 2215384.62 reads per min processed...  
 2205882.35 reads per min processed...  
 2197183.10 reads per min processed...  
 2189189.19 reads per min processed...  
 2181818.18 reads per min processed...  
 2175000.00 reads per min processed...  
 2168674.70 reads per min processed...  
 2162790.70 reads per min processed...  
 2157303.37 reads per min processed...  
 2152173.91 reads per min processed...  
 2147368.42 reads per min processed...  
 2142857.14 reads per min processed...  
 2160000.00 reads per min processed...  
 2155339.81 reads per min processed...  
 2171428.57 reads per min processed...  
 2166666.67 reads per min processed...  
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 2157894.74 reads per min processed...  
 2191304.35 reads per min processed...  
 2224137.93 reads per min processed...  
 2256410.26 reads per min processed...  
 2288135.59 reads per min processed...  
 2300000.00 reads per min processed...  
 2274193.55 reads per min processed...  
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 2261538.46 reads per min processed...  
 2255639.10 reads per min processed...  
 2266666.67 reads per min processed...  
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 2271428.57 reads per min processed...  
 2265734.27 reads per min processed...  
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 2255033.56 reads per min processed...  
 2250000.00 reads per min processed...  
 2245161.29 reads per min processed...  
 2254777.07 reads per min processed...  
 2250000.00 reads per min processed...  
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 2254545.45 reads per min processed...  
 2250000.00 reads per min processed...  
 2245614.04 reads per min processed...  
 2241379.31 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.Gf3M9PYNLu/1173_SK8_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.Gf3M9PYNLu/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -2571822.730221
EM: Round [1] log likelihood: -2571347.288783
EM: Round [2] log likelihood: -2571204.984153
EM: Round [3] log likelihood: -2571140.470394
EM: Round [4] log likelihood: -2571106.417557
EM: Round [5] log likelihood: -2571086.784706
EM: Round [6] log likelihood: -2571074.667089
EM: Round [7] log likelihood: -2571066.732093
EM: Round [8] log likelihood: -2571061.257311
EM: Round [9] log likelihood: -2571057.304769
EM: Round [10] log likelihood: -2571054.339254
EM: Round [11] log likelihood: -2571052.041602
EM: Round [12] log likelihood: -2571050.213346
EM: Round [13] log likelihood: -2571048.726140
EM: Round [14] log likelihood: -2571047.493922
EM: Round [15] log likelihood: -2571046.457073
EM: Round [16] log likelihood: -2571045.573071
EM: Round [17] log likelihood: -2571044.810804
EM: Round [18] log likelihood: -2571044.146999
EM: Round [19] log likelihood: -2571043.563907
EM: Round [20] log likelihood: -2571043.047761
EM: Round [21] log likelihood: -2571042.587728
EM: Round [22] log likelihood: -2571042.175172
EM: Round [23] log likelihood: -2571041.803129
EM: Round [24] log likelihood: -2571041.465928
EM: Round [25] log likelihood: -2571041.158906
EM: Round [26] log likelihood: -2571040.878199
EM: Round [27] log likelihood: -2571040.620578
EM: Round [28] log likelihood: -2571040.383326
EM: Round [29] log likelihood: -2571040.164141
EM: Round [30] log likelihood: -2571039.961062
EM: Round [31] log likelihood: -2571039.772407
EM: Round [32] log likelihood: -2571039.596726
EM: Round [33] log likelihood: -2571039.432760
EM: Round [34] log likelihood: -2571039.279413
EM: Round [35] log likelihood: -2571039.135726
EM: Round [36] log likelihood: -2571039.000853
EM: Round [37] log likelihood: -2571038.874049
EM: Round [38] log likelihood: -2571038.754650
EM: Round [39] log likelihood: -2571038.642068
EM: Round [40] log likelihood: -2571038.535773
EM: Round [41] log likelihood: -2571038.435293
EM: Round [42] log likelihood: -2571038.340200
EM: Round [43] log likelihood: -2571038.250110
EM: Round [44] log likelihood: -2571038.164674
EM: Round [45] log likelihood: -2571038.083573
EM: Round [46] log likelihood: -2571038.006520
EM: Round [47] log likelihood: -2571037.933251
EM: Round [48] log likelihood: -2571037.863524
EM: Round [49] log likelihood: -2571037.797117
EM: Round [50] log likelihood: -2571037.733828
EM: Round [51] log likelihood: -2571037.673469
EM: Round [52] log likelihood: -2571037.615866
EM: Round [53] log likelihood: -2571037.560861
EM: Round [54] log likelihood: -2571037.508304
EM: Round [55] log likelihood: -2571037.458060
EM: Round [56] log likelihood: -2571037.410000
EM: Round [57] log likelihood: -2571037.364006
EM: Round [58] log likelihood: -2571037.319968
EM: Round [59] log likelihood: -2571037.277782
EM: Round [60] log likelihood: -2571037.237354
EM: Round [61] log likelihood: -2571037.198592
EM: Round [62] log likelihood: -2571037.161413
EM: Round [63] log likelihood: -2571037.125739
EM: Round [64] log likelihood: -2571037.091495
EM: Round [65] log likelihood: -2571037.058613
EM: Round [66] log likelihood: -2571037.027027
EM: Round [67] log likelihood: -2571036.996675
EM: Round [68] log likelihood: -2571036.967501
EM: Round [69] log likelihood: -2571036.939449
EM: Round [70] log likelihood: -2571036.912469
EM: Round [71] log likelihood: -2571036.886512
EM: Round [72] log likelihood: -2571036.861533
EM: Round [73] log likelihood: -2571036.837487
EM: Round [74] log likelihood: -2571036.814335
EM: Round [75] log likelihood: -2571036.792038
EM: Round [76] log likelihood: -2571036.770558
EM: Round [77] log likelihood: -2571036.749861
EM: Round [78] log likelihood: -2571036.729914
EM: Round [79] log likelihood: -2571036.710685
EM: Round [80] log likelihood: -2571036.692146
EM: Round [81] log likelihood: -2571036.674266
EM: Round [82] log likelihood: -2571036.657020
EM: Round [83] log likelihood: -2571036.640382
EM: Round [84] log likelihood: -2571036.624327
EM: Round [85] log likelihood: -2571036.608832
EM: Round [86] log likelihood: -2571036.593875
EM: Round [87] log likelihood: -2571036.579434
EM: Round [88] log likelihood: -2571036.565490
EM: Round [89] log likelihood: -2571036.552023
EM: Round [90] log likelihood: -2571036.539014
EM: Round [91] log likelihood: -2571036.526447
EM: Round [92] log likelihood: -2571036.514304
EM: Round [93] log likelihood: -2571036.502569
EM: Round [94] log likelihood: -2571036.491227
EM: Round [95] log likelihood: -2571036.480263
EM: Round [96] log likelihood: -2571036.469662
EM: Round [97] log likelihood: -2571036.459413
EM: Round [98] log likelihood: -2571036.449500
EM: Round [99] log likelihood: -2571036.439913
EM: Round [100] log likelihood: -2571036.430639
EM: Round [101] log likelihood: -2571036.421667
EM: Round [102] log likelihood: -2571036.412986
EM: Round [103] log likelihood: -2571036.404585
EM: Round [104] log likelihood: -2571036.396454
EM: Round [105] log likelihood: -2571036.388584
EM: Round [106] log likelihood: -2571036.380965
EM: Round [107] log likelihood: -2571036.373589
EM: Round [108] log likelihood: -2571036.366447
EM: Round [109] log likelihood: -2571036.359531
EM: Round [110] log likelihood: -2571036.352832
EM: Round [111] log likelihood: -2571036.346343
EM: Round [112] log likelihood: -2571036.340057
EM: Round [113] log likelihood: -2571036.333968
EM: Round [114] log likelihood: -2571036.328067
EM: Round [115] log likelihood: -2571036.322349
EM: Round [116] log likelihood: -2571036.316807
EM: Round [117] log likelihood: -2571036.311435
EM: Round [118] log likelihood: -2571036.306228
EM: Round [119] log likelihood: -2571036.301180
EM: Round [120] log likelihood: -2571036.296286
EM: Round [121] log likelihood: -2571036.291540
EM: Round [122] log likelihood: -2571036.286938
EM: Round [123] log likelihood: -2571036.282474
EM: Round [124] log likelihood: -2571036.278144
EM: Round [125] log likelihood: -2571036.273944
EM: Round [126] log likelihood: -2571036.269869
EM: Round [127] log likelihood: -2571036.265915
EM: Round [128] log likelihood: -2571036.262079
EM: Round [129] log likelihood: -2571036.258356
EM: Round [130] log likelihood: -2571036.254742
EM: Round [131] log likelihood: -2571036.251235
EM: Round [132] log likelihood: -2571036.247830
EM: Round [133] log likelihood: -2571036.244524
EM: Round [134] log likelihood: -2571036.241314
EM: Round [135] log likelihood: -2571036.238198
EM: Round [136] log likelihood: -2571036.235171
EM: Round [137] log likelihood: -2571036.232232
EM: Round [138] log likelihood: -2571036.229377
EM: Round [139] log likelihood: -2571036.226603
EM: Round [140] log likelihood: -2571036.223909
EM: Round [141] log likelihood: -2571036.221291
EM: Round [142] log likelihood: -2571036.218747
EM: Round [143] log likelihood: -2571036.216275
EM: Round [144] log likelihood: -2571036.213873
EM: Round [145] log likelihood: -2571036.211538
EM: Round [146] log likelihood: -2571036.209268
EM: Round [147] log likelihood: -2571036.207061
EM: Round [148] log likelihood: -2571036.204916
EM: Round [149] log likelihood: -2571036.202830
EM: Round [150] log likelihood: -2571036.200802
EM: Round [151] log likelihood: -2571036.198829
EM: Round [152] log likelihood: -2571036.196911
EM: Round [153] log likelihood: -2571036.195045
EM: Round [154] log likelihood: -2571036.193230
EM: Round [155] log likelihood: -2571036.191464
EM: Round [156] log likelihood: -2571036.189745
EM: Round [157] log likelihood: -2571036.188074
EM: Round [158] log likelihood: -2571036.186447
EM: Round [159] log likelihood: -2571036.184863
EM: Round [160] log likelihood: -2571036.183322
EM: Round [161] log likelihood: -2571036.181822
EM: Round [162] log likelihood: -2571036.180362
EM: Round [163] log likelihood: -2571036.178940
EM: Round [164] log likelihood: -2571036.177555
EM: Round [165] log likelihood: -2571036.176207
EM: Round [166] log likelihood: -2571036.174895
EM: Round [167] log likelihood: -2571036.173616
EM: Round [168] log likelihood: -2571036.172371
EM: Round [169] log likelihood: -2571036.171158
EM: Round [170] log likelihood: -2571036.169976
EM: Round [171] log likelihood: -2571036.168825
EM: Round [172] log likelihood: -2571036.167703
EM: Round [173] log likelihood: -2571036.166610
EM: Round [174] log likelihood: -2571036.165544
EM: Round [175] log likelihood: -2571036.164506
EM: Round [176] log likelihood: -2571036.163494
EM: Round [177] log likelihood: -2571036.162507
EM: Round [178] log likelihood: -2571036.161545
EM: Round [179] log likelihood: -2571036.160607
EM: Round [180] log likelihood: -2571036.159693
EM: Round [181] log likelihood: -2571036.158801
EM: Round [182] log likelihood: -2571036.157932
EM: Round [183] log likelihood: -2571036.157083
EM: Round [184] log likelihood: -2571036.156256
EM: Round [185] log likelihood: -2571036.155449
EM: Round [186] log likelihood: -2571036.154661
EM: Round [187] log likelihood: -2571036.153893
EM: Round [188] log likelihood: -2571036.153144
EM: Round [189] log likelihood: -2571036.152412
EM: Round [190] log likelihood: -2571036.151698
EM: Round [191] log likelihood: -2571036.151001
EM: Round [192] log likelihood: -2571036.150321
EM: Round [193] log likelihood: -2571036.149657
EM: Round [194] log likelihood: -2571036.149009
EM: Round [195] log likelihood: -2571036.148376
EM: Round [196] log likelihood: -2571036.147758
EM: Round [197] log likelihood: -2571036.147155
EM: Round [198] log likelihood: -2571036.146565
EM: Round [199] log likelihood: -2571036.145990
EM: Round [200] log likelihood: -2571036.145427
EM: Round [201] log likelihood: -2571036.144878
EM: Round [202] log likelihood: -2571036.144341
EM: Round [203] log likelihood: -2571036.143817
EM: Round [204] log likelihood: -2571036.143305
EM: Round [205] log likelihood: -2571036.142804
EM: Round [206] log likelihood: -2571036.142315
EM: Round [207] log likelihood: -2571036.141837
EM: Round [208] log likelihood: -2571036.141369
EM: Round [209] log likelihood: -2571036.140912
EM: Round [210] log likelihood: -2571036.140466
EM: Round [211] log likelihood: -2571036.140029
EM: Round [212] log likelihood: -2571036.139602
EM: Round [213] log likelihood: -2571036.139185
EM: Round [214] log likelihood: -2571036.138776
EM: Round [215] log likelihood: -2571036.138377
EM: Round [216] log likelihood: -2571036.137987
EM: Round [217] log likelihood: -2571036.137605
EM: Round [218] log likelihood: -2571036.137231
EM: Round [219] log likelihood: -2571036.136865
EM: Round [220] log likelihood: -2571036.136507
EM: Round [221] log likelihood: -2571036.136157
EM: Round [222] log likelihood: -2571036.135815
EM: Round [223] log likelihood: -2571036.135480
EM: Round [224] log likelihood: -2571036.135152
EM: Round [225] log likelihood: -2571036.134831
EM: Round [226] log likelihood: -2571036.134517
EM: Round [227] log likelihood: -2571036.134209
EM: Round [228] log likelihood: -2571036.133908
EM: Round [229] log likelihood: -2571036.133613
EM: Round [230] log likelihood: -2571036.133324
EM: Round [231] log likelihood: -2571036.133041
EM: Round [232] log likelihood: -2571036.132765
EM: Round [233] log likelihood: -2571036.132493
EM: Round [234] log likelihood: -2571036.132228
EM: Round [235] log likelihood: -2571036.131968
EM: Round [236] log likelihood: -2571036.131713
EM: Round [237] log likelihood: -2571036.131463
EM: Round [238] log likelihood: -2571036.131219
EM: Round [239] log likelihood: -2571036.130979
EM: Round [240] log likelihood: -2571036.130745
EM: Round [241] log likelihood: -2571036.130515
EM: Round [242] log likelihood: -2571036.130289
EM: Round [243] log likelihood: -2571036.130068
EM: Round [244] log likelihood: -2571036.129852
EM: Round [245] log likelihood: -2571036.129639
EM: Round [246] log likelihood: -2571036.129431
EM: Round [247] log likelihood: -2571036.129228
EM: Round [248] log likelihood: -2571036.129028
EM: Round [249] log likelihood: -2571036.128832
EM: Round [250] log likelihood: -2571036.128639
EM: Round [251] log likelihood: -2571036.128451
EM: Round [252] log likelihood: -2571036.128266
EM: Round [253] log likelihood: -2571036.128085
EM: Round [254] log likelihood: -2571036.127907
EM: Round [255] log likelihood: -2571036.127733
EM: Round [256] log likelihood: -2571036.127562
EM: Round [257] log likelihood: -2571036.127395
EM: Round [258] log likelihood: -2571036.127230
EM: Round [259] log likelihood: -2571036.127069
EM: Round [260] log likelihood: -2571036.126910
EM: Round [261] log likelihood: -2571036.126755
EM: Round [262] log likelihood: -2571036.126603
EM: Round [263] log likelihood: -2571036.126453
EM: Round [264] log likelihood: -2571036.126306
EM: Round [265] log likelihood: -2571036.126162
EM: Round [266] log likelihood: -2571036.126021
EM: Round [267] log likelihood: -2571036.125882
EM: Round [268] log likelihood: -2571036.125746
EM: Round [269] log likelihood: -2571036.125613
EM: Round [270] log likelihood: -2571036.125482
EM: Round [271] log likelihood: -2571036.125353
EM: Round [272] log likelihood: -2571036.125226
EM: Round [273] log likelihood: -2571036.125102
EM: Round [274] log likelihood: -2571036.124981
EM: Round [275] log likelihood: -2571036.124861
EM: Round [276] log likelihood: -2571036.124743
EM: Round [277] log likelihood: -2571036.124628
EM: Round [278] log likelihood: -2571036.124515
EM: Round [279] log likelihood: -2571036.124404
EM: Round [280] log likelihood: -2571036.124295
EM: Round [281] log likelihood: -2571036.124187
EM: Round [282] log likelihood: -2571036.124082
EM: Round [283] log likelihood: -2571036.123978
EM: Round [284] log likelihood: -2571036.123877
EM: Round [285] log likelihood: -2571036.123777
EM: Stopping iterations at round 285 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -2565059.478153
EM: Round [1] log likelihood: -2564749.846482
EM: Round [2] log likelihood: -2564655.693224
EM: Round [3] log likelihood: -2564613.249554
EM: Round [4] log likelihood: -2564591.147609
EM: Round [5] log likelihood: -2564578.635245
EM: Round [6] log likelihood: -2564571.076464
EM: Round [7] log likelihood: -2564566.242419
EM: Round [8] log likelihood: -2564562.988161
EM: Round [9] log likelihood: -2564560.695090
EM: Round [10] log likelihood: -2564559.013749
EM: Round [11] log likelihood: -2564557.738282
EM: Round [12] log likelihood: -2564556.742478
EM: Round [13] log likelihood: -2564555.945969
EM: Round [14] log likelihood: -2564555.295732
EM: Round [15] log likelihood: -2564554.755627
EM: Round [16] log likelihood: -2564554.300287
EM: Round [17] log likelihood: -2564553.911438
EM: Round [18] log likelihood: -2564553.575609
EM: Round [19] log likelihood: -2564553.282667
EM: Round [20] log likelihood: -2564553.024859
EM: Round [21] log likelihood: -2564552.796160
EM: Round [22] log likelihood: -2564552.591823
EM: Round [23] log likelihood: -2564552.408065
EM: Round [24] log likelihood: -2564552.241841
EM: Round [25] log likelihood: -2564552.090672
EM: Round [26] log likelihood: -2564551.952523
EM: Round [27] log likelihood: -2564551.825715
EM: Round [28] log likelihood: -2564551.708845
EM: Round [29] log likelihood: -2564551.600738
EM: Round [30] log likelihood: -2564551.500399
EM: Round [31] log likelihood: -2564551.406985
EM: Round [32] log likelihood: -2564551.319771
EM: Round [33] log likelihood: -2564551.238138
EM: Round [34] log likelihood: -2564551.161547
EM: Round [35] log likelihood: -2564551.089532
EM: Round [36] log likelihood: -2564551.021683
EM: Round [37] log likelihood: -2564550.957642
EM: Round [38] log likelihood: -2564550.897094
EM: Round [39] log likelihood: -2564550.839757
EM: Round [40] log likelihood: -2564550.785382
EM: Round [41] log likelihood: -2564550.733748
EM: Round [42] log likelihood: -2564550.684655
EM: Round [43] log likelihood: -2564550.637922
EM: Round [44] log likelihood: -2564550.593389
EM: Round [45] log likelihood: -2564550.550909
EM: Round [46] log likelihood: -2564550.510349
EM: Round [47] log likelihood: -2564550.471587
EM: Round [48] log likelihood: -2564550.434512
EM: Round [49] log likelihood: -2564550.399025
EM: Round [50] log likelihood: -2564550.365031
EM: Round [51] log likelihood: -2564550.332444
EM: Round [52] log likelihood: -2564550.301187
EM: Round [53] log likelihood: -2564550.271187
EM: Round [54] log likelihood: -2564550.242375
EM: Round [55] log likelihood: -2564550.214691
EM: Round [56] log likelihood: -2564550.188074
EM: Round [57] log likelihood: -2564550.162473
EM: Round [58] log likelihood: -2564550.137836
EM: Round [59] log likelihood: -2564550.114116
EM: Round [60] log likelihood: -2564550.091270
EM: Round [61] log likelihood: -2564550.069256
EM: Round [62] log likelihood: -2564550.048036
EM: Round [63] log likelihood: -2564550.027575
EM: Round [64] log likelihood: -2564550.007837
EM: Round [65] log likelihood: -2564549.988791
EM: Round [66] log likelihood: -2564549.970407
EM: Round [67] log likelihood: -2564549.952657
EM: Round [68] log likelihood: -2564549.935513
EM: Round [69] log likelihood: -2564549.918951
EM: Round [70] log likelihood: -2564549.902947
EM: Round [71] log likelihood: -2564549.887477
EM: Round [72] log likelihood: -2564549.872521
EM: Round [73] log likelihood: -2564549.858058
EM: Round [74] log likelihood: -2564549.844068
EM: Round [75] log likelihood: -2564549.830534
EM: Round [76] log likelihood: -2564549.817438
EM: Round [77] log likelihood: -2564549.804763
EM: Round [78] log likelihood: -2564549.792493
EM: Round [79] log likelihood: -2564549.780613
EM: Round [80] log likelihood: -2564549.769110
EM: Round [81] log likelihood: -2564549.757968
EM: Round [82] log likelihood: -2564549.747176
EM: Round [83] log likelihood: -2564549.736720
EM: Round [84] log likelihood: -2564549.726588
EM: Round [85] log likelihood: -2564549.716770
EM: Round [86] log likelihood: -2564549.707253
EM: Round [87] log likelihood: -2564549.698028
EM: Round [88] log likelihood: -2564549.689085
EM: Round [89] log likelihood: -2564549.680413
EM: Round [90] log likelihood: -2564549.672004
EM: Round [91] log likelihood: -2564549.663848
EM: Round [92] log likelihood: -2564549.655938
EM: Round [93] log likelihood: -2564549.648264
EM: Round [94] log likelihood: -2564549.640819
EM: Round [95] log likelihood: -2564549.633596
EM: Round [96] log likelihood: -2564549.626587
EM: Round [97] log likelihood: -2564549.619785
EM: Round [98] log likelihood: -2564549.613183
EM: Round [99] log likelihood: -2564549.606776
EM: Round [100] log likelihood: -2564549.600555
EM: Round [101] log likelihood: -2564549.594517
EM: Round [102] log likelihood: -2564549.588654
EM: Round [103] log likelihood: -2564549.582962
EM: Round [104] log likelihood: -2564549.577434
EM: Round [105] log likelihood: -2564549.572066
EM: Round [106] log likelihood: -2564549.566852
EM: Round [107] log likelihood: -2564549.561789
EM: Round [108] log likelihood: -2564549.556870
EM: Round [109] log likelihood: -2564549.552092
EM: Round [110] log likelihood: -2564549.547450
EM: Round [111] log likelihood: -2564549.542940
EM: Round [112] log likelihood: -2564549.538558
EM: Round [113] log likelihood: -2564549.534300
EM: Round [114] log likelihood: -2564549.530162
EM: Round [115] log likelihood: -2564549.526141
EM: Round [116] log likelihood: -2564549.522233
EM: Round [117] log likelihood: -2564549.518434
EM: Round [118] log likelihood: -2564549.514742
EM: Round [119] log likelihood: -2564549.511153
EM: Round [120] log likelihood: -2564549.507663
EM: Round [121] log likelihood: -2564549.504271
EM: Round [122] log likelihood: -2564549.500973
EM: Round [123] log likelihood: -2564549.497766
EM: Round [124] log likelihood: -2564549.494647
EM: Round [125] log likelihood: -2564549.491614
EM: Round [126] log likelihood: -2564549.488665
EM: Round [127] log likelihood: -2564549.485797
EM: Round [128] log likelihood: -2564549.483007
EM: Round [129] log likelihood: -2564549.480293
EM: Round [130] log likelihood: -2564549.477653
EM: Round [131] log likelihood: -2564549.475085
EM: Round [132] log likelihood: -2564549.472586
EM: Round [133] log likelihood: -2564549.470155
EM: Round [134] log likelihood: -2564549.467790
EM: Round [135] log likelihood: -2564549.465489
EM: Round [136] log likelihood: -2564549.463249
EM: Round [137] log likelihood: -2564549.461070
EM: Round [138] log likelihood: -2564549.458948
EM: Round [139] log likelihood: -2564549.456884
EM: Round [140] log likelihood: -2564549.454874
EM: Round [141] log likelihood: -2564549.452918
EM: Round [142] log likelihood: -2564549.451014
EM: Round [143] log likelihood: -2564549.449161
EM: Round [144] log likelihood: -2564549.447356
EM: Round [145] log likelihood: -2564549.445599
EM: Round [146] log likelihood: -2564549.443888
EM: Round [147] log likelihood: -2564549.442222
EM: Round [148] log likelihood: -2564549.440599
EM: Round [149] log likelihood: -2564549.439019
EM: Round [150] log likelihood: -2564549.437480
EM: Round [151] log likelihood: -2564549.435981
EM: Round [152] log likelihood: -2564549.434521
EM: Round [153] log likelihood: -2564549.433099
EM: Round [154] log likelihood: -2564549.431713
EM: Round [155] log likelihood: -2564549.430363
EM: Round [156] log likelihood: -2564549.429048
EM: Round [157] log likelihood: -2564549.427767
EM: Round [158] log likelihood: -2564549.426518
EM: Round [159] log likelihood: -2564549.425301
EM: Round [160] log likelihood: -2564549.424115
EM: Round [161] log likelihood: -2564549.422960
EM: Round [162] log likelihood: -2564549.421833
EM: Round [163] log likelihood: -2564549.420735
EM: Round [164] log likelihood: -2564549.419665
EM: Round [165] log likelihood: -2564549.418621
EM: Round [166] log likelihood: -2564549.417604
EM: Round [167] log likelihood: -2564549.416612
EM: Round [168] log likelihood: -2564549.415645
EM: Round [169] log likelihood: -2564549.414702
EM: Round [170] log likelihood: -2564549.413782
EM: Round [171] log likelihood: -2564549.412885
EM: Round [172] log likelihood: -2564549.412010
EM: Round [173] log likelihood: -2564549.411157
EM: Round [174] log likelihood: -2564549.410325
EM: Round [175] log likelihood: -2564549.409513
EM: Round [176] log likelihood: -2564549.408721
EM: Round [177] log likelihood: -2564549.407948
EM: Round [178] log likelihood: -2564549.407194
EM: Round [179] log likelihood: -2564549.406458
EM: Round [180] log likelihood: -2564549.405740
EM: Round [181] log likelihood: -2564549.405040
EM: Round [182] log likelihood: -2564549.404356
EM: Round [183] log likelihood: -2564549.403689
EM: Round [184] log likelihood: -2564549.403037
EM: Round [185] log likelihood: -2564549.402401
EM: Round [186] log likelihood: -2564549.401780
EM: Round [187] log likelihood: -2564549.401174
EM: Round [188] log likelihood: -2564549.400583
EM: Round [189] log likelihood: -2564549.400005
EM: Round [190] log likelihood: -2564549.399441
EM: Round [191] log likelihood: -2564549.398890
EM: Round [192] log likelihood: -2564549.398351
EM: Round [193] log likelihood: -2564549.397826
EM: Round [194] log likelihood: -2564549.397312
EM: Round [195] log likelihood: -2564549.396811
EM: Round [196] log likelihood: -2564549.396321
EM: Round [197] log likelihood: -2564549.395843
EM: Round [198] log likelihood: -2564549.395375
EM: Round [199] log likelihood: -2564549.394918
EM: Round [200] log likelihood: -2564549.394472
EM: Round [201] log likelihood: -2564549.394035
EM: Round [202] log likelihood: -2564549.393609
EM: Round [203] log likelihood: -2564549.393192
EM: Round [204] log likelihood: -2564549.392785
EM: Round [205] log likelihood: -2564549.392387
EM: Round [206] log likelihood: -2564549.391998
EM: Round [207] log likelihood: -2564549.391617
EM: Round [208] log likelihood: -2564549.391245
EM: Round [209] log likelihood: -2564549.390882
EM: Round [210] log likelihood: -2564549.390526
EM: Round [211] log likelihood: -2564549.390178
EM: Round [212] log likelihood: -2564549.389838
EM: Round [213] log likelihood: -2564549.389506
EM: Round [214] log likelihood: -2564549.389180
EM: Round [215] log likelihood: -2564549.388862
EM: Round [216] log likelihood: -2564549.388551
EM: Round [217] log likelihood: -2564549.388246
EM: Round [218] log likelihood: -2564549.387949
EM: Round [219] log likelihood: -2564549.387657
EM: Round [220] log likelihood: -2564549.387372
EM: Round [221] log likelihood: -2564549.387093
EM: Round [222] log likelihood: -2564549.386820
EM: Round [223] log likelihood: -2564549.386553
EM: Round [224] log likelihood: -2564549.386291
EM: Round [225] log likelihood: -2564549.386035
EM: Round [226] log likelihood: -2564549.385784
EM: Round [227] log likelihood: -2564549.385539
EM: Round [228] log likelihood: -2564549.385299
EM: Round [229] log likelihood: -2564549.385064
EM: Round [230] log likelihood: -2564549.384834
EM: Round [231] log likelihood: -2564549.384608
EM: Round [232] log likelihood: -2564549.384388
EM: Round [233] log likelihood: -2564549.384172
EM: Round [234] log likelihood: -2564549.383960
EM: Round [235] log likelihood: -2564549.383753
EM: Round [236] log likelihood: -2564549.383550
EM: Round [237] log likelihood: -2564549.383351
EM: Round [238] log likelihood: -2564549.383156
EM: Round [239] log likelihood: -2564549.382965
EM: Round [240] log likelihood: -2564549.382778
EM: Round [241] log likelihood: -2564549.382595
EM: Round [242] log likelihood: -2564549.382416
EM: Round [243] log likelihood: -2564549.382240
EM: Round [244] log likelihood: -2564549.382068
EM: Round [245] log likelihood: -2564549.381899
EM: Round [246] log likelihood: -2564549.381734
EM: Round [247] log likelihood: -2564549.381571
EM: Round [248] log likelihood: -2564549.381412
EM: Round [249] log likelihood: -2564549.381257
EM: Round [250] log likelihood: -2564549.381104
EM: Round [251] log likelihood: -2564549.380954
EM: Round [252] log likelihood: -2564549.380808
EM: Round [253] log likelihood: -2564549.380664
EM: Round [254] log likelihood: -2564549.380523
EM: Round [255] log likelihood: -2564549.380384
EM: Round [256] log likelihood: -2564549.380249
EM: Round [257] log likelihood: -2564549.380116
EM: Round [258] log likelihood: -2564549.379986
EM: Round [259] log likelihood: -2564549.379858
EM: Round [260] log likelihood: -2564549.379732
EM: Round [261] log likelihood: -2564549.379609
EM: Round [262] log likelihood: -2564549.379489
EM: Round [263] log likelihood: -2564549.379370
EM: Round [264] log likelihood: -2564549.379254
EM: Round [265] log likelihood: -2564549.379140
EM: Round [266] log likelihood: -2564549.379029
EM: Round [267] log likelihood: -2564549.378919
EM: Round [268] log likelihood: -2564549.378812
EM: Round [269] log likelihood: -2564549.378706
EM: Round [270] log likelihood: -2564549.378603
EM: Round [271] log likelihood: -2564549.378501
EM: Round [272] log likelihood: -2564549.378401
EM: Stopping iterations at round 272 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.Gf3M9PYNLu/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.Gf3M9PYNLu/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.Gf3M9PYNLu/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 204206882 > /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.Gf3M9PYNLu/ctat_genome_lib_build_dir > /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.Gf3M9PYNLu/ctat_genome_lib_build_dir --annotate /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.Gf3M9PYNLu/ctat_genome_lib_build_dir
-done, see /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.Gf3M9PYNLu/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 928, filtered: 4842)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.Gf3M9PYNLu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.Gf3M9PYNLu/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGL-.g@-ext]
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WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
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WARNING, no entry stored in dbm for [IGL-.g@-ext]
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WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000230239.1]
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WARNING, no entry stored in dbm for [ENSG00000228463.10]
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WARNING, no entry stored in dbm for [ENSG00000261722.1]
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WARNING, no entry stored in dbm for [ENSG00000235706.8]
WARNING, no entry stored in dbm for [ENSG00000179840.5]
WARNING, no entry stored in dbm for [ENSG00000244627.5]
WARNING, no entry stored in dbm for [ENSG00000234076.1]
WARNING, no entry stored in dbm for [ENSG00000227372.12]
WARNING, no entry stored in dbm for [ENSG00000282886.1]
WARNING, no entry stored in dbm for [ENSG00000263400.8]
WARNING, no entry stored in dbm for [ENSG00000263508.6]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000229613.2]
WARNING, no entry stored in dbm for [ENSG00000280415.1]
WARNING, no entry stored in dbm for [ENSG00000253631.1]
WARNING, no entry stored in dbm for [ENSG00000241316.8]
WARNING, no entry stored in dbm for [ENSG00000247708.8]
WARNING, no entry stored in dbm for [ENSG00000257522.7]
WARNING, no entry stored in dbm for [ENSG00000264112.1]
WARNING, no entry stored in dbm for [ENSG00000242294.6]
WARNING, no entry stored in dbm for [ENSG00000230183.4]
WARNING, no entry stored in dbm for [ENSG00000280054.1]
WARNING, no entry stored in dbm for [ENSG00000230724.9]
WARNING, no entry stored in dbm for [ENSG00000239906.1]
WARNING, no entry stored in dbm for [ENSG00000285280.2]
WARNING, no entry stored in dbm for [ENSG00000281376.1]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000235142.10]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000253541.1]
WARNING, no entry stored in dbm for [ENSG00000236456.1]
WARNING, no entry stored in dbm for [ENSG00000247950.7]
WARNING, no entry stored in dbm for [ENSG00000278730.1]
WARNING, no entry stored in dbm for [ENSG00000228956.8]
WARNING, no entry stored in dbm for [ENSG00000223873.1]
WARNING, no entry stored in dbm for [ENSG00000230697.1]
WARNING, no entry stored in dbm for [ENSG00000240405.7]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000281641.3]
WARNING, no entry stored in dbm for [ENSG00000270696.1]
WARNING, no entry stored in dbm for [ENSG00000200959.1]
WARNING, no entry stored in dbm for [ENSG00000218208.1]
WARNING, no entry stored in dbm for [ENSG00000237490.3]
WARNING, no entry stored in dbm for [ENSG00000268869.6]
WARNING, no entry stored in dbm for [ENSG00000223169.1]
WARNING, no entry stored in dbm for [ENSG00000272173.1]
WARNING, no entry stored in dbm for [ENSG00000200741.1]
WARNING, no entry stored in dbm for [ENSG00000242315.3]
WARNING, no entry stored in dbm for [ENSG00000241156.3]
WARNING, no entry stored in dbm for [ENSG00000222448.1]
WARNING, no entry stored in dbm for [ENSG00000257671.1]
WARNING, no entry stored in dbm for [ENSG00000223886.3]
WARNING, no entry stored in dbm for [ENSG00000261167.1]
WARNING, no entry stored in dbm for [ENSG00000272888.7]
WARNING, no entry stored in dbm for [ENSG00000154608.14]
WARNING, no entry stored in dbm for [ENSG00000287863.1]
WARNING, no entry stored in dbm for [ENSG00000285835.1]
WARNING, no entry stored in dbm for [ENSG00000277215.2]
WARNING, no entry stored in dbm for [ENSG00000255857.6]
WARNING, no entry stored in dbm for [ENSG00000230487.8]
WARNING, no entry stored in dbm for [ENSG00000205918.9]
WARNING, no entry stored in dbm for [ENSG00000260335.1]
WARNING, no entry stored in dbm for [ENSG00000275769.1]
WARNING, no entry stored in dbm for [ENSG00000260192.3]
WARNING, no entry stored in dbm for [ENSG00000238086.5]
WARNING, no entry stored in dbm for [ENSG00000239911.2]
WARNING, no entry stored in dbm for [ENSG00000078319.10]
WARNING, no entry stored in dbm for [ENSG00000228643.1]
WARNING, no entry stored in dbm for [ENSG00000224607.4]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000237505.8]
WARNING, no entry stored in dbm for [ENSG00000255240.6]
WARNING, no entry stored in dbm for [ENSG00000231167.3]
WARNING, no entry stored in dbm for [ENSG00000260075.1]
WARNING, no entry stored in dbm for [ENSG00000267106.8]
WARNING, no entry stored in dbm for [ENSG00000213333.3]
WARNING, no entry stored in dbm for [ENSG00000179918.19]
WARNING, no entry stored in dbm for [ENSG00000233178.7]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000210144.1]
WARNING, no entry stored in dbm for [ENSG00000220125.1]
WARNING, no entry stored in dbm for [ENSG00000249772.1]
WARNING, no entry stored in dbm for [ENSG00000221288.1]
WARNING, no entry stored in dbm for [ENSG00000284250.1]
WARNING, no entry stored in dbm for [ENSG00000259240.1]
WARNING, no entry stored in dbm for [ENSG00000259240.1]
WARNING, no entry stored in dbm for [ENSG00000283944.1]
WARNING, no entry stored in dbm for [ENSG00000234350.5]
WARNING, no entry stored in dbm for [ENSG00000257759.2]
WARNING, no entry stored in dbm for [ENSG00000254701.3]
WARNING, no entry stored in dbm for [ENSG00000253320.7]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000248265.2]
WARNING, no entry stored in dbm for [ENSG00000234222.6]
WARNING, no entry stored in dbm for [ENSG00000229611.2]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000285808.1]
WARNING, no entry stored in dbm for [ENSG00000284848.2]
WARNING, no entry stored in dbm for [ENSG00000258175.1]
WARNING, no entry stored in dbm for [ENSG00000259719.6]
WARNING, no entry stored in dbm for [ENSG00000251026.2]
WARNING, no entry stored in dbm for [ENSG00000283544.1]
WARNING, no entry stored in dbm for [ENSG00000249383.2]
WARNING, no entry stored in dbm for [ENSG00000241383.2]
WARNING, no entry stored in dbm for [ENSG00000234663.7]
WARNING, no entry stored in dbm for [ENSG00000237166.2]
WARNING, no entry stored in dbm for [ENSG00000258754.8]
WARNING, no entry stored in dbm for [ENSG00000237877.7]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000237491.10]
WARNING, no entry stored in dbm for [ENSG00000233621.2]
WARNING, no entry stored in dbm for [ENSG00000249464.6]
WARNING, no entry stored in dbm for [ENSG00000233123.1]
WARNING, no entry stored in dbm for [ENSG00000228393.4]
WARNING, no entry stored in dbm for [ENSG00000282508.2]
WARNING, no entry stored in dbm for [ENSG00000224316.1]
WARNING, no entry stored in dbm for [ENSG00000258279.4]
WARNING, no entry stored in dbm for [ENSG00000235621.9]
WARNING, no entry stored in dbm for [ENSG00000231028.9]
WARNING, no entry stored in dbm for [ENSG00000226696.6]
WARNING, no entry stored in dbm for [ENSG00000287659.1]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000131885.17]
WARNING, no entry stored in dbm for [ENSG00000176124.15]
WARNING, no entry stored in dbm for [ENSG00000250686.2]
WARNING, no entry stored in dbm for [ENSG00000249565.2]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000272109.2]
WARNING, no entry stored in dbm for [ENSG00000229127.2]
WARNING, no entry stored in dbm for [ENSG00000254682.1]
WARNING, no entry stored in dbm for [ENSG00000267722.1]
WARNING, no entry stored in dbm for [ENSG00000226942.2]
WARNING, no entry stored in dbm for [ENSG00000282965.1]
WARNING, no entry stored in dbm for [ENSG00000236679.2]
WARNING, no entry stored in dbm for [ENSG00000230191.1]
WARNING, no entry stored in dbm for [ENSG00000241406.3]
WARNING, no entry stored in dbm for [ENSG00000236373.2]
WARNING, no entry stored in dbm for [ENSG00000237306.1]
WARNING, no entry stored in dbm for [ENSG00000183199.6]
WARNING, no entry stored in dbm for [ENSG00000280135.1]
WARNING, no entry stored in dbm for [ENSG00000213386.3]
WARNING, no entry stored in dbm for [ENSG00000269609.6]
WARNING, no entry stored in dbm for [ENSG00000235290.1]
WARNING, no entry stored in dbm for [ENSG00000204622.11]
WARNING, no entry stored in dbm for [ENSG00000235290.1]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000208772.1]
WARNING, no entry stored in dbm for [ENSG00000233299.1]
WARNING, no entry stored in dbm for [ENSG00000258667.2]
WARNING, no entry stored in dbm for [ENSG00000233012.2]
WARNING, no entry stored in dbm for [ENSG00000245482.2]
WARNING, no entry stored in dbm for [ENSG00000247228.3]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000242808.10]
WARNING, no entry stored in dbm for [ENSG00000228393.4]
WARNING, no entry stored in dbm for [ENSG00000260144.1]
WARNING, no entry stored in dbm for [ENSG00000272396.1]
WARNING, no entry stored in dbm for [ENSG00000254349.6]
WARNING, no entry stored in dbm for [ENSG00000250330.1]
WARNING, no entry stored in dbm for [ENSG00000180211.5]
WARNING, no entry stored in dbm for [ENSG00000177369.9]
WARNING, no entry stored in dbm for [ENSG00000284699.1]
WARNING, no entry stored in dbm for [ENSG00000204837.5]
WARNING, no entry stored in dbm for [ENSG00000229321.2]
WARNING, no entry stored in dbm for [ENSG00000287646.1]
WARNING, no entry stored in dbm for [ENSG00000213300.5]
WARNING, no entry stored in dbm for [ENSG00000255052.5]
WARNING, no entry stored in dbm for [ENSG00000254016.3]
WARNING, no entry stored in dbm for [ENSG00000227888.4]
WARNING, no entry stored in dbm for [ENSG00000233708.1]
WARNING, no entry stored in dbm for [ENSG00000274602.5]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000235706.8]
WARNING, no entry stored in dbm for [ENSG00000224628.2]
WARNING, no entry stored in dbm for [ENSG00000258454.1]
WARNING, no entry stored in dbm for [ENSG00000258454.1]
WARNING, no entry stored in dbm for [ENSG00000249096.7]
WARNING, no entry stored in dbm for [ENSG00000180385.8]
WARNING, no entry stored in dbm for [ENSG00000271270.7]
WARNING, no entry stored in dbm for [ENSG00000236810.6]
WARNING, no entry stored in dbm for [ENSG00000266913.1]
WARNING, no entry stored in dbm for [ENSG00000243155.1]
WARNING, no entry stored in dbm for [ENSG00000283380.1]
WARNING, no entry stored in dbm for [ENSG00000243701.7]
WARNING, no entry stored in dbm for [ENSG00000257222.1]
WARNING, no entry stored in dbm for [ENSG00000264113.2]
WARNING, no entry stored in dbm for [ENSG00000228536.3]
WARNING, no entry stored in dbm for [ENSG00000279127.1]
WARNING, no entry stored in dbm for [ENSG00000250983.1]
WARNING, no entry stored in dbm for [ENSG00000280407.2]
WARNING, no entry stored in dbm for [ENSG00000261670.1]
WARNING, no entry stored in dbm for [ENSG00000229816.1]
WARNING, no entry stored in dbm for [ENSG00000287243.2]
WARNING, no entry stored in dbm for [ENSG00000235244.4]
WARNING, no entry stored in dbm for [ENSG00000154198.14]
WARNING, no entry stored in dbm for [ENSG00000269345.1]
WARNING, no entry stored in dbm for [ENSG00000283415.2]
WARNING, no entry stored in dbm for [ENSG00000180525.13]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000260896.6]
WARNING, no entry stored in dbm for [ENSG00000285051.2]
WARNING, no entry stored in dbm for [ENSG00000204929.13]
WARNING, no entry stored in dbm for [ENSG00000154608.14]
WARNING, no entry stored in dbm for [ENSG00000227676.4]
WARNING, no entry stored in dbm for [ENSG00000251031.2]
WARNING, no entry stored in dbm for [ENSG00000277128.2]
WARNING, no entry stored in dbm for [ENSG00000223773.7]
WARNING, no entry stored in dbm for [ENSG00000201023.1]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000267080.6]
WARNING, no entry stored in dbm for [ENSG00000232818.2]
WARNING, no entry stored in dbm for [ENSG00000235091.2]
WARNING, no entry stored in dbm for [ENSG00000198590.12]
WARNING, no entry stored in dbm for [ENSG00000234083.1]
WARNING, no entry stored in dbm for [ENSG00000275468.1]
WARNING, no entry stored in dbm for [ENSG00000213985.4]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000278768.2]
WARNING, no entry stored in dbm for [ENSG00000268388.6]
WARNING, no entry stored in dbm for [ENSG00000254158.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000270449.1]
WARNING, no entry stored in dbm for [ENSG00000213104.3]
WARNING, no entry stored in dbm for [ENSG00000248546.3]
WARNING, no entry stored in dbm for [ENSG00000273192.1]
WARNING, no entry stored in dbm for [ENSG00000222810.1]
WARNING, no entry stored in dbm for [ENSG00000284740.1]
WARNING, no entry stored in dbm for [ENSG00000228037.1]
WARNING, no entry stored in dbm for [ENSG00000223440.1]
WARNING, no entry stored in dbm for [ENSG00000235776.2]
WARNING, no entry stored in dbm for [ENSG00000259015.1]
WARNING, no entry stored in dbm for [ENSG00000259048.1]
WARNING, no entry stored in dbm for [ENSG00000270504.1]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000250090.1]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000236199.1]
WARNING, no entry stored in dbm for [ENSG00000231440.1]
WARNING, no entry stored in dbm for [ENSG00000225032.5]
WARNING, no entry stored in dbm for [ENSG00000258414.1]
WARNING, no entry stored in dbm for [ENSG00000271335.6]
WARNING, no entry stored in dbm for [ENSG00000259515.1]
WARNING, no entry stored in dbm for [ENSG00000258661.1]
WARNING, no entry stored in dbm for [ENSG00000232310.8]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000229991.1]
WARNING, no entry stored in dbm for [ENSG00000268257.2]
WARNING, no entry stored in dbm for [ENSG00000223959.8]
WARNING, no entry stored in dbm for [ENSG00000223959.8]
WARNING, no entry stored in dbm for [ENSG00000254332.1]
WARNING, no entry stored in dbm for [ENSG00000272734.1]
WARNING, no entry stored in dbm for [ENSG00000261623.1]
WARNING, no entry stored in dbm for [ENSG00000161912.18]
WARNING, no entry stored in dbm for [ENSG00000251432.7]
WARNING, no entry stored in dbm for [ENSG00000281649.2]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000232710.1]
WARNING, no entry stored in dbm for [ENSG00000285062.1]
WARNING, no entry stored in dbm for [ENSG00000285062.1]
WARNING, no entry stored in dbm for [ENSG00000238094.1]
WARNING, no entry stored in dbm for [ENSG00000279047.4]
WARNING, no entry stored in dbm for [ENSG00000277089.4]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000277406.2]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000274642.1]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000226992.1]
WARNING, no entry stored in dbm for [ENSG00000260308.1]
WARNING, no entry stored in dbm for [ENSG00000278722.1]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000256712.1]
WARNING, no entry stored in dbm for [ENSG00000264215.1]
WARNING, no entry stored in dbm for [ENSG00000255177.2]
WARNING, no entry stored in dbm for [ENSG00000259623.1]
WARNING, no entry stored in dbm for [ENSG00000260971.4]
WARNING, no entry stored in dbm for [ENSG00000286182.1]
WARNING, no entry stored in dbm for [ENSG00000250195.1]
WARNING, no entry stored in dbm for [ENSG00000250111.3]
WARNING, no entry stored in dbm for [ENSG00000250159.7]
WARNING, no entry stored in dbm for [ENSG00000286266.1]
WARNING, no entry stored in dbm for [ENSG00000241593.5]
WARNING, no entry stored in dbm for [ENSG00000228303.1]
WARNING, no entry stored in dbm for [ENSG00000287985.1]
WARNING, no entry stored in dbm for [ENSG00000278766.2]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000272134.1]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000287993.1]
WARNING, no entry stored in dbm for [ENSG00000258778.2]
WARNING, no entry stored in dbm for [ENSG00000255182.2]
WARNING, no entry stored in dbm for [ENSG00000249685.1]
WARNING, no entry stored in dbm for [ENSG00000241962.9]
WARNING, no entry stored in dbm for [ENSG00000250461.1]
WARNING, no entry stored in dbm for [ENSG00000287188.1]
WARNING, no entry stored in dbm for [ENSG00000213250.5]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000259649.4]
WARNING, no entry stored in dbm for [ENSG00000248794.1]
WARNING, no entry stored in dbm for [ENSG00000288549.1]
WARNING, no entry stored in dbm for [ENSG00000242880.2]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000255621.1]
WARNING, no entry stored in dbm for [ENSG00000253636.1]
WARNING, no entry stored in dbm for [ENSG00000248624.1]
WARNING, no entry stored in dbm for [ENSG00000279254.1]
WARNING, no entry stored in dbm for [ENSG00000118976.5]
WARNING, no entry stored in dbm for [ENSG00000288604.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000287299.1]
WARNING, no entry stored in dbm for [ENSG00000240401.9]
WARNING, no entry stored in dbm for [ENSG00000285710.1]
WARNING, no entry stored in dbm for [ENSG00000247199.5]
WARNING, no entry stored in dbm for [ENSG00000264067.1]
WARNING, no entry stored in dbm for [ENSG00000241281.1]
WARNING, no entry stored in dbm for [ENSG00000279592.1]
WARNING, no entry stored in dbm for [ENSG00000255177.2]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000262211.1]
WARNING, no entry stored in dbm for [ENSG00000255040.1]
WARNING, no entry stored in dbm for [ENSG00000276548.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000250928.1]
WARNING, no entry stored in dbm for [ENSG00000260086.3]
WARNING, no entry stored in dbm for [ENSG00000263345.1]
WARNING, no entry stored in dbm for [ENSG00000258424.1]
WARNING, no entry stored in dbm for [ENSG00000267191.2]
WARNING, no entry stored in dbm for [ENSG00000260107.1]
WARNING, no entry stored in dbm for [ENSG00000226746.2]
WARNING, no entry stored in dbm for [ENSG00000232006.9]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000243554.1]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000241278.1]
WARNING, no entry stored in dbm for [ENSG00000281376.1]
WARNING, no entry stored in dbm for [ENSG00000268895.6]
WARNING, no entry stored in dbm for [ENSG00000174384.9]


	* STAR-Fusion complete.  See output: /tmp/nxf.Gf3M9PYNLu/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)