AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 349
Pass (FILTER=PASS): 30 (8.6%)
Fail (FILTER=FAIL): 319 (91.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 105
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 48
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 23
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 19
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 18
confidence_below_min(low<high): 17
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 8
confidence_below_min(medium<high);aih_curated_blacklist: 5
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 4
Breakdown by confidence:
high: 30 pass, 2 fail (total: 32)
low: 0 pass, 125 fail (total: 125)
medium: 0 pass, 192 fail (total: 192)
Arriba filter: 349 rows -> 30 PASS; wrote 1173_9C_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filtered.tsv and 1173_9C_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 1173_9C_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filter_summary.txt