File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a9/06a6abf403365b5b3549a083cf61a6/.command.err
Size
100.2 KB
Attempt
-ctat genome lib [/tmp/nxf.KVmV9hHFJy/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.KVmV9hHFJy/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary
-sample contains 293303435 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.KVmV9hHFJy/ctat_genome_lib_build_dir  -J /tmp/nxf.KVmV9hHFJy/1173_LV7_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction  -O /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.KVmV9hHFJy/1173_LV7_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.KVmV9hHFJy/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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-building interval tree based on /tmp/nxf.KVmV9hHFJy/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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-building interval tree based on /tmp/nxf.KVmV9hHFJy/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[3520000], rate=39774.01/min -building interval tree based on /tmp/nxf.KVmV9hHFJy/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[3520000], rate=34799.80/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.KVmV9hHFJy/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
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done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.KVmV9hHFJy/1173_LV7_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.KVmV9hHFJy/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -3520601.543365
EM: Round [1] log likelihood: -3520117.009510
EM: Round [2] log likelihood: -3519944.123951
EM: Round [3] log likelihood: -3519863.345514
EM: Round [4] log likelihood: -3519820.044460
EM: Round [5] log likelihood: -3519794.839808
EM: Round [6] log likelihood: -3519779.259951
EM: Round [7] log likelihood: -3519769.122908
EM: Round [8] log likelihood: -3519762.212839
EM: Round [9] log likelihood: -3519757.300464
EM: Round [10] log likelihood: -3519753.677345
EM: Round [11] log likelihood: -3519750.919739
EM: Round [12] log likelihood: -3519748.764552
EM: Round [13] log likelihood: -3519747.042370
EM: Round [14] log likelihood: -3519745.640278
EM: Round [15] log likelihood: -3519744.480609
EM: Round [16] log likelihood: -3519743.508409
EM: Round [17] log likelihood: -3519742.683809
EM: Round [18] log likelihood: -3519741.977249
EM: Round [19] log likelihood: -3519741.366384
EM: Round [20] log likelihood: -3519740.834037
EM: Round [21] log likelihood: -3519740.366806
EM: Round [22] log likelihood: -3519739.954094
EM: Round [23] log likelihood: -3519739.587422
EM: Round [24] log likelihood: -3519739.259935
EM: Round [25] log likelihood: -3519738.966031
EM: Round [26] log likelihood: -3519738.701100
EM: Round [27] log likelihood: -3519738.461308
EM: Round [28] log likelihood: -3519738.243452
EM: Round [29] log likelihood: -3519738.044831
EM: Round [30] log likelihood: -3519737.863158
EM: Round [31] log likelihood: -3519737.696481
EM: Round [32] log likelihood: -3519737.543127
EM: Round [33] log likelihood: -3519737.401658
EM: Round [34] log likelihood: -3519737.270825
EM: Round [35] log likelihood: -3519737.149547
EM: Round [36] log likelihood: -3519737.036876
EM: Round [37] log likelihood: -3519736.931985
EM: Round [38] log likelihood: -3519736.834144
EM: Round [39] log likelihood: -3519736.742712
EM: Round [40] log likelihood: -3519736.657118
EM: Round [41] log likelihood: -3519736.576857
EM: Round [42] log likelihood: -3519736.501479
EM: Round [43] log likelihood: -3519736.430580
EM: Round [44] log likelihood: -3519736.363802
EM: Round [45] log likelihood: -3519736.300819
EM: Round [46] log likelihood: -3519736.241340
EM: Round [47] log likelihood: -3519736.185103
EM: Round [48] log likelihood: -3519736.131868
EM: Round [49] log likelihood: -3519736.081420
EM: Round [50] log likelihood: -3519736.033563
EM: Round [51] log likelihood: -3519735.988119
EM: Round [52] log likelihood: -3519735.944923
EM: Round [53] log likelihood: -3519735.903827
EM: Round [54] log likelihood: -3519735.864694
EM: Round [55] log likelihood: -3519735.827400
EM: Round [56] log likelihood: -3519735.791829
EM: Round [57] log likelihood: -3519735.757874
EM: Round [58] log likelihood: -3519735.725440
EM: Round [59] log likelihood: -3519735.694434
EM: Round [60] log likelihood: -3519735.664774
EM: Round [61] log likelihood: -3519735.636383
EM: Round [62] log likelihood: -3519735.609188
EM: Round [63] log likelihood: -3519735.583124
EM: Round [64] log likelihood: -3519735.558129
EM: Round [65] log likelihood: -3519735.534144
EM: Round [66] log likelihood: -3519735.511117
EM: Round [67] log likelihood: -3519735.488997
EM: Round [68] log likelihood: -3519735.467737
EM: Round [69] log likelihood: -3519735.447295
EM: Round [70] log likelihood: -3519735.427629
EM: Round [71] log likelihood: -3519735.408700
EM: Round [72] log likelihood: -3519735.390473
EM: Round [73] log likelihood: -3519735.372915
EM: Round [74] log likelihood: -3519735.355992
EM: Round [75] log likelihood: -3519735.339677
EM: Round [76] log likelihood: -3519735.323940
EM: Round [77] log likelihood: -3519735.308756
EM: Round [78] log likelihood: -3519735.294099
EM: Round [79] log likelihood: -3519735.279946
EM: Round [80] log likelihood: -3519735.266276
EM: Round [81] log likelihood: -3519735.253066
EM: Round [82] log likelihood: -3519735.240297
EM: Round [83] log likelihood: -3519735.227951
EM: Round [84] log likelihood: -3519735.216010
EM: Round [85] log likelihood: -3519735.204457
EM: Round [86] log likelihood: -3519735.193277
EM: Round [87] log likelihood: -3519735.182453
EM: Round [88] log likelihood: -3519735.171972
EM: Round [89] log likelihood: -3519735.161821
EM: Round [90] log likelihood: -3519735.151986
EM: Round [91] log likelihood: -3519735.142455
EM: Round [92] log likelihood: -3519735.133217
EM: Round [93] log likelihood: -3519735.124259
EM: Round [94] log likelihood: -3519735.115573
EM: Round [95] log likelihood: -3519735.107147
EM: Round [96] log likelihood: -3519735.098972
EM: Round [97] log likelihood: -3519735.091039
EM: Round [98] log likelihood: -3519735.083339
EM: Round [99] log likelihood: -3519735.075864
EM: Round [100] log likelihood: -3519735.068605
EM: Round [101] log likelihood: -3519735.061556
EM: Round [102] log likelihood: -3519735.054708
EM: Round [103] log likelihood: -3519735.048055
EM: Round [104] log likelihood: -3519735.041591
EM: Round [105] log likelihood: -3519735.035307
EM: Round [106] log likelihood: -3519735.029200
EM: Round [107] log likelihood: -3519735.023262
EM: Round [108] log likelihood: -3519735.017488
EM: Round [109] log likelihood: -3519735.011873
EM: Round [110] log likelihood: -3519735.006411
EM: Round [111] log likelihood: -3519735.001097
EM: Round [112] log likelihood: -3519734.995927
EM: Round [113] log likelihood: -3519734.990897
EM: Round [114] log likelihood: -3519734.986000
EM: Round [115] log likelihood: -3519734.981234
EM: Round [116] log likelihood: -3519734.976595
EM: Round [117] log likelihood: -3519734.972078
EM: Round [118] log likelihood: -3519734.967679
EM: Round [119] log likelihood: -3519734.963395
EM: Round [120] log likelihood: -3519734.959223
EM: Round [121] log likelihood: -3519734.955158
EM: Round [122] log likelihood: -3519734.951198
EM: Round [123] log likelihood: -3519734.947340
EM: Round [124] log likelihood: -3519734.943581
EM: Round [125] log likelihood: -3519734.939917
EM: Round [126] log likelihood: -3519734.936345
EM: Round [127] log likelihood: -3519734.932864
EM: Round [128] log likelihood: -3519734.929471
EM: Round [129] log likelihood: -3519734.926162
EM: Round [130] log likelihood: -3519734.922936
EM: Round [131] log likelihood: -3519734.919790
EM: Round [132] log likelihood: -3519734.916721
EM: Round [133] log likelihood: -3519734.913729
EM: Round [134] log likelihood: -3519734.910809
EM: Round [135] log likelihood: -3519734.907962
EM: Round [136] log likelihood: -3519734.905183
EM: Round [137] log likelihood: -3519734.902472
EM: Round [138] log likelihood: -3519734.899826
EM: Round [139] log likelihood: -3519734.897245
EM: Round [140] log likelihood: -3519734.894725
EM: Round [141] log likelihood: -3519734.892265
EM: Round [142] log likelihood: -3519734.889865
EM: Round [143] log likelihood: -3519734.887521
EM: Round [144] log likelihood: -3519734.885233
EM: Round [145] log likelihood: -3519734.882998
EM: Round [146] log likelihood: -3519734.880817
EM: Round [147] log likelihood: -3519734.878686
EM: Round [148] log likelihood: -3519734.876605
EM: Round [149] log likelihood: -3519734.874573
EM: Round [150] log likelihood: -3519734.872588
EM: Round [151] log likelihood: -3519734.870648
EM: Round [152] log likelihood: -3519734.868754
EM: Round [153] log likelihood: -3519734.866903
EM: Round [154] log likelihood: -3519734.865094
EM: Round [155] log likelihood: -3519734.863327
EM: Round [156] log likelihood: -3519734.861600
EM: Round [157] log likelihood: -3519734.859912
EM: Round [158] log likelihood: -3519734.858262
EM: Round [159] log likelihood: -3519734.856650
EM: Round [160] log likelihood: -3519734.855073
EM: Round [161] log likelihood: -3519734.853532
EM: Round [162] log likelihood: -3519734.852026
EM: Round [163] log likelihood: -3519734.850553
EM: Round [164] log likelihood: -3519734.849112
EM: Round [165] log likelihood: -3519734.847704
EM: Round [166] log likelihood: -3519734.846327
EM: Round [167] log likelihood: -3519734.844979
EM: Round [168] log likelihood: -3519734.843662
EM: Round [169] log likelihood: -3519734.842373
EM: Round [170] log likelihood: -3519734.841112
EM: Round [171] log likelihood: -3519734.839879
EM: Round [172] log likelihood: -3519734.838672
EM: Round [173] log likelihood: -3519734.837491
EM: Round [174] log likelihood: -3519734.836336
EM: Round [175] log likelihood: -3519734.835205
EM: Round [176] log likelihood: -3519734.834099
EM: Round [177] log likelihood: -3519734.833016
EM: Round [178] log likelihood: -3519734.831956
EM: Round [179] log likelihood: -3519734.830919
EM: Round [180] log likelihood: -3519734.829903
EM: Round [181] log likelihood: -3519734.828909
EM: Round [182] log likelihood: -3519734.827936
EM: Round [183] log likelihood: -3519734.826983
EM: Round [184] log likelihood: -3519734.826050
EM: Round [185] log likelihood: -3519734.825136
EM: Round [186] log likelihood: -3519734.824241
EM: Round [187] log likelihood: -3519734.823365
EM: Round [188] log likelihood: -3519734.822506
EM: Round [189] log likelihood: -3519734.821666
EM: Round [190] log likelihood: -3519734.820842
EM: Round [191] log likelihood: -3519734.820035
EM: Round [192] log likelihood: -3519734.819244
EM: Round [193] log likelihood: -3519734.818470
EM: Round [194] log likelihood: -3519734.817711
EM: Round [195] log likelihood: -3519734.816967
EM: Round [196] log likelihood: -3519734.816238
EM: Round [197] log likelihood: -3519734.815524
EM: Round [198] log likelihood: -3519734.814824
EM: Round [199] log likelihood: -3519734.814138
EM: Round [200] log likelihood: -3519734.813465
EM: Round [201] log likelihood: -3519734.812806
EM: Round [202] log likelihood: -3519734.812159
EM: Round [203] log likelihood: -3519734.811525
EM: Round [204] log likelihood: -3519734.810904
EM: Round [205] log likelihood: -3519734.810294
EM: Round [206] log likelihood: -3519734.809697
EM: Round [207] log likelihood: -3519734.809111
EM: Round [208] log likelihood: -3519734.808536
EM: Round [209] log likelihood: -3519734.807972
EM: Round [210] log likelihood: -3519734.807418
EM: Round [211] log likelihood: -3519734.806876
EM: Round [212] log likelihood: -3519734.806343
EM: Round [213] log likelihood: -3519734.805821
EM: Round [214] log likelihood: -3519734.805308
EM: Round [215] log likelihood: -3519734.804805
EM: Round [216] log likelihood: -3519734.804311
EM: Round [217] log likelihood: -3519734.803827
EM: Round [218] log likelihood: -3519734.803351
EM: Round [219] log likelihood: -3519734.802885
EM: Round [220] log likelihood: -3519734.802426
EM: Round [221] log likelihood: -3519734.801977
EM: Round [222] log likelihood: -3519734.801535
EM: Round [223] log likelihood: -3519734.801101
EM: Round [224] log likelihood: -3519734.800675
EM: Round [225] log likelihood: -3519734.800257
EM: Round [226] log likelihood: -3519734.799847
EM: Round [227] log likelihood: -3519734.799443
EM: Round [228] log likelihood: -3519734.799047
EM: Round [229] log likelihood: -3519734.798658
EM: Round [230] log likelihood: -3519734.798276
EM: Round [231] log likelihood: -3519734.797900
EM: Round [232] log likelihood: -3519734.797531
EM: Round [233] log likelihood: -3519734.797169
EM: Round [234] log likelihood: -3519734.796812
EM: Round [235] log likelihood: -3519734.796462
EM: Round [236] log likelihood: -3519734.796118
EM: Round [237] log likelihood: -3519734.795780
EM: Round [238] log likelihood: -3519734.795447
EM: Round [239] log likelihood: -3519734.795121
EM: Round [240] log likelihood: -3519734.794799
EM: Round [241] log likelihood: -3519734.794484
EM: Round [242] log likelihood: -3519734.794173
EM: Round [243] log likelihood: -3519734.793868
EM: Round [244] log likelihood: -3519734.793567
EM: Round [245] log likelihood: -3519734.793272
EM: Round [246] log likelihood: -3519734.792981
EM: Round [247] log likelihood: -3519734.792696
EM: Round [248] log likelihood: -3519734.792415
EM: Round [249] log likelihood: -3519734.792138
EM: Round [250] log likelihood: -3519734.791866
EM: Round [251] log likelihood: -3519734.791599
EM: Round [252] log likelihood: -3519734.791335
EM: Round [253] log likelihood: -3519734.791076
EM: Round [254] log likelihood: -3519734.790821
EM: Round [255] log likelihood: -3519734.790570
EM: Round [256] log likelihood: -3519734.790323
EM: Round [257] log likelihood: -3519734.790080
EM: Round [258] log likelihood: -3519734.789841
EM: Round [259] log likelihood: -3519734.789605
EM: Round [260] log likelihood: -3519734.789373
EM: Round [261] log likelihood: -3519734.789145
EM: Round [262] log likelihood: -3519734.788920
EM: Round [263] log likelihood: -3519734.788699
EM: Round [264] log likelihood: -3519734.788481
EM: Round [265] log likelihood: -3519734.788266
EM: Round [266] log likelihood: -3519734.788054
EM: Round [267] log likelihood: -3519734.787846
EM: Round [268] log likelihood: -3519734.787641
EM: Round [269] log likelihood: -3519734.787439
EM: Round [270] log likelihood: -3519734.787239
EM: Round [271] log likelihood: -3519734.787043
EM: Round [272] log likelihood: -3519734.786850
EM: Round [273] log likelihood: -3519734.786659
EM: Round [274] log likelihood: -3519734.786471
EM: Round [275] log likelihood: -3519734.786286
EM: Round [276] log likelihood: -3519734.786103
EM: Round [277] log likelihood: -3519734.785923
EM: Round [278] log likelihood: -3519734.785746
EM: Round [279] log likelihood: -3519734.785571
EM: Round [280] log likelihood: -3519734.785399
EM: Round [281] log likelihood: -3519734.785229
EM: Round [282] log likelihood: -3519734.785061
EM: Round [283] log likelihood: -3519734.784896
EM: Round [284] log likelihood: -3519734.784733
EM: Round [285] log likelihood: -3519734.784572
EM: Round [286] log likelihood: -3519734.784414
EM: Round [287] log likelihood: -3519734.784257
EM: Round [288] log likelihood: -3519734.784103
EM: Round [289] log likelihood: -3519734.783951
EM: Round [290] log likelihood: -3519734.783801
EM: Round [291] log likelihood: -3519734.783653
EM: Round [292] log likelihood: -3519734.783506
EM: Round [293] log likelihood: -3519734.783362
EM: Round [294] log likelihood: -3519734.783220
EM: Round [295] log likelihood: -3519734.783079
EM: Round [296] log likelihood: -3519734.782941
EM: Round [297] log likelihood: -3519734.782804
EM: Round [298] log likelihood: -3519734.782669
EM: Round [299] log likelihood: -3519734.782535
EM: Round [300] log likelihood: -3519734.782404
EM: Round [301] log likelihood: -3519734.782274
EM: Round [302] log likelihood: -3519734.782145
EM: Round [303] log likelihood: -3519734.782019
EM: Round [304] log likelihood: -3519734.781893
EM: Round [305] log likelihood: -3519734.781770
EM: Round [306] log likelihood: -3519734.781648
EM: Round [307] log likelihood: -3519734.781527
EM: Round [308] log likelihood: -3519734.781408
EM: Round [309] log likelihood: -3519734.781290
EM: Round [310] log likelihood: -3519734.781174
EM: Round [311] log likelihood: -3519734.781059
EM: Round [312] log likelihood: -3519734.780946
EM: Round [313] log likelihood: -3519734.780834
EM: Round [314] log likelihood: -3519734.780723
EM: Round [315] log likelihood: -3519734.780614
EM: Round [316] log likelihood: -3519734.780506
EM: Round [317] log likelihood: -3519734.780399
EM: Round [318] log likelihood: -3519734.780293
EM: Round [319] log likelihood: -3519734.780189
EM: Round [320] log likelihood: -3519734.780086
EM: Round [321] log likelihood: -3519734.779984
EM: Round [322] log likelihood: -3519734.779883
EM: Round [323] log likelihood: -3519734.779783
EM: Stopping iterations at round 323 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -3518258.357531
EM: Round [1] log likelihood: -3517864.619537
EM: Round [2] log likelihood: -3517730.197141
EM: Round [3] log likelihood: -3517669.405647
EM: Round [4] log likelihood: -3517637.548694
EM: Round [5] log likelihood: -3517619.271474
EM: Round [6] log likelihood: -3517608.078734
EM: Round [7] log likelihood: -3517600.839652
EM: Round [8] log likelihood: -3517595.921840
EM: Round [9] log likelihood: -3517592.430682
EM: Round [10] log likelihood: -3517589.855834
EM: Round [11] log likelihood: -3517587.894647
EM: Round [12] log likelihood: -3517586.360486
EM: Round [13] log likelihood: -3517585.133738
EM: Round [14] log likelihood: -3517584.134882
EM: Round [15] log likelihood: -3517583.309239
EM: Round [16] log likelihood: -3517582.618057
EM: Round [17] log likelihood: -3517582.033142
EM: Round [18] log likelihood: -3517581.533499
EM: Round [19] log likelihood: -3517581.103184
EM: Round [20] log likelihood: -3517580.729881
EM: Round [21] log likelihood: -3517580.403931
EM: Round [22] log likelihood: -3517580.117663
EM: Round [23] log likelihood: -3517579.864912
EM: Round [24] log likelihood: -3517579.640675
EM: Round [25] log likelihood: -3517579.440851
EM: Round [26] log likelihood: -3517579.262055
EM: Round [27] log likelihood: -3517579.101470
EM: Round [28] log likelihood: -3517578.956735
EM: Round [29] log likelihood: -3517578.825861
EM: Round [30] log likelihood: -3517578.707160
EM: Round [31] log likelihood: -3517578.599193
EM: Round [32] log likelihood: -3517578.500728
EM: Round [33] log likelihood: -3517578.410705
EM: Round [34] log likelihood: -3517578.328205
EM: Round [35] log likelihood: -3517578.252433
EM: Round [36] log likelihood: -3517578.182694
EM: Round [37] log likelihood: -3517578.118384
EM: Round [38] log likelihood: -3517578.058967
EM: Round [39] log likelihood: -3517578.003976
EM: Round [40] log likelihood: -3517577.952996
EM: Round [41] log likelihood: -3517577.905659
EM: Round [42] log likelihood: -3517577.861640
EM: Round [43] log likelihood: -3517577.820647
EM: Round [44] log likelihood: -3517577.782421
EM: Round [45] log likelihood: -3517577.746728
EM: Round [46] log likelihood: -3517577.713360
EM: Round [47] log likelihood: -3517577.682128
EM: Round [48] log likelihood: -3517577.652864
EM: Round [49] log likelihood: -3517577.625412
EM: Round [50] log likelihood: -3517577.599634
EM: Round [51] log likelihood: -3517577.575405
EM: Round [52] log likelihood: -3517577.552608
EM: Round [53] log likelihood: -3517577.531140
EM: Round [54] log likelihood: -3517577.510905
EM: Round [55] log likelihood: -3517577.491816
EM: Round [56] log likelihood: -3517577.473792
EM: Round [57] log likelihood: -3517577.456762
EM: Round [58] log likelihood: -3517577.440656
EM: Round [59] log likelihood: -3517577.425415
EM: Round [60] log likelihood: -3517577.410979
EM: Round [61] log likelihood: -3517577.397298
EM: Round [62] log likelihood: -3517577.384322
EM: Round [63] log likelihood: -3517577.372007
EM: Round [64] log likelihood: -3517577.360311
EM: Round [65] log likelihood: -3517577.349196
EM: Round [66] log likelihood: -3517577.338626
EM: Round [67] log likelihood: -3517577.328568
EM: Round [68] log likelihood: -3517577.318992
EM: Round [69] log likelihood: -3517577.309869
EM: Round [70] log likelihood: -3517577.301172
EM: Round [71] log likelihood: -3517577.292876
EM: Round [72] log likelihood: -3517577.284959
EM: Round [73] log likelihood: -3517577.277400
EM: Round [74] log likelihood: -3517577.270177
EM: Round [75] log likelihood: -3517577.263272
EM: Round [76] log likelihood: -3517577.256668
EM: Round [77] log likelihood: -3517577.250348
EM: Round [78] log likelihood: -3517577.244297
EM: Round [79] log likelihood: -3517577.238501
EM: Round [80] log likelihood: -3517577.232945
EM: Round [81] log likelihood: -3517577.227618
EM: Round [82] log likelihood: -3517577.222507
EM: Round [83] log likelihood: -3517577.217602
EM: Round [84] log likelihood: -3517577.212892
EM: Round [85] log likelihood: -3517577.208366
EM: Round [86] log likelihood: -3517577.204016
EM: Round [87] log likelihood: -3517577.199834
EM: Round [88] log likelihood: -3517577.195810
EM: Round [89] log likelihood: -3517577.191937
EM: Round [90] log likelihood: -3517577.188208
EM: Round [91] log likelihood: -3517577.184615
EM: Round [92] log likelihood: -3517577.181153
EM: Round [93] log likelihood: -3517577.177816
EM: Round [94] log likelihood: -3517577.174597
EM: Round [95] log likelihood: -3517577.171491
EM: Round [96] log likelihood: -3517577.168493
EM: Round [97] log likelihood: -3517577.165598
EM: Round [98] log likelihood: -3517577.162801
EM: Round [99] log likelihood: -3517577.160098
EM: Round [100] log likelihood: -3517577.157486
EM: Round [101] log likelihood: -3517577.154959
EM: Round [102] log likelihood: -3517577.152514
EM: Round [103] log likelihood: -3517577.150148
EM: Round [104] log likelihood: -3517577.147858
EM: Round [105] log likelihood: -3517577.145639
EM: Round [106] log likelihood: -3517577.143490
EM: Round [107] log likelihood: -3517577.141407
EM: Round [108] log likelihood: -3517577.139387
EM: Round [109] log likelihood: -3517577.137429
EM: Round [110] log likelihood: -3517577.135529
EM: Round [111] log likelihood: -3517577.133686
EM: Round [112] log likelihood: -3517577.131896
EM: Round [113] log likelihood: -3517577.130158
EM: Round [114] log likelihood: -3517577.128470
EM: Round [115] log likelihood: -3517577.126830
EM: Round [116] log likelihood: -3517577.125236
EM: Round [117] log likelihood: -3517577.123686
EM: Round [118] log likelihood: -3517577.122179
EM: Round [119] log likelihood: -3517577.120713
EM: Round [120] log likelihood: -3517577.119287
EM: Round [121] log likelihood: -3517577.117899
EM: Round [122] log likelihood: -3517577.116547
EM: Round [123] log likelihood: -3517577.115231
EM: Round [124] log likelihood: -3517577.113949
EM: Round [125] log likelihood: -3517577.112700
EM: Round [126] log likelihood: -3517577.111483
EM: Round [127] log likelihood: -3517577.110297
EM: Round [128] log likelihood: -3517577.109140
EM: Round [129] log likelihood: -3517577.108012
EM: Round [130] log likelihood: -3517577.106911
EM: Round [131] log likelihood: -3517577.105837
EM: Round [132] log likelihood: -3517577.104789
EM: Round [133] log likelihood: -3517577.103766
EM: Round [134] log likelihood: -3517577.102767
EM: Round [135] log likelihood: -3517577.101791
EM: Round [136] log likelihood: -3517577.100838
EM: Round [137] log likelihood: -3517577.099907
EM: Round [138] log likelihood: -3517577.098997
EM: Round [139] log likelihood: -3517577.098107
EM: Round [140] log likelihood: -3517577.097238
EM: Round [141] log likelihood: -3517577.096388
EM: Round [142] log likelihood: -3517577.095556
EM: Round [143] log likelihood: -3517577.094742
EM: Round [144] log likelihood: -3517577.093946
EM: Round [145] log likelihood: -3517577.093167
EM: Round [146] log likelihood: -3517577.092405
EM: Round [147] log likelihood: -3517577.091659
EM: Round [148] log likelihood: -3517577.090928
EM: Round [149] log likelihood: -3517577.090212
EM: Round [150] log likelihood: -3517577.089511
EM: Round [151] log likelihood: -3517577.088824
EM: Round [152] log likelihood: -3517577.088151
EM: Round [153] log likelihood: -3517577.087492
EM: Round [154] log likelihood: -3517577.086846
EM: Round [155] log likelihood: -3517577.086212
EM: Round [156] log likelihood: -3517577.085591
EM: Round [157] log likelihood: -3517577.084981
EM: Round [158] log likelihood: -3517577.084384
EM: Round [159] log likelihood: -3517577.083798
EM: Round [160] log likelihood: -3517577.083223
EM: Round [161] log likelihood: -3517577.082658
EM: Round [162] log likelihood: -3517577.082105
EM: Round [163] log likelihood: -3517577.081561
EM: Round [164] log likelihood: -3517577.081027
EM: Round [165] log likelihood: -3517577.080504
EM: Round [166] log likelihood: -3517577.079989
EM: Round [167] log likelihood: -3517577.079484
EM: Round [168] log likelihood: -3517577.078988
EM: Round [169] log likelihood: -3517577.078500
EM: Round [170] log likelihood: -3517577.078021
EM: Round [171] log likelihood: -3517577.077551
EM: Round [172] log likelihood: -3517577.077088
EM: Round [173] log likelihood: -3517577.076634
EM: Round [174] log likelihood: -3517577.076187
EM: Round [175] log likelihood: -3517577.075748
EM: Round [176] log likelihood: -3517577.075316
EM: Round [177] log likelihood: -3517577.074891
EM: Round [178] log likelihood: -3517577.074474
EM: Round [179] log likelihood: -3517577.074063
EM: Round [180] log likelihood: -3517577.073659
EM: Round [181] log likelihood: -3517577.073262
EM: Round [182] log likelihood: -3517577.072870
EM: Round [183] log likelihood: -3517577.072486
EM: Round [184] log likelihood: -3517577.072107
EM: Round [185] log likelihood: -3517577.071734
EM: Round [186] log likelihood: -3517577.071367
EM: Round [187] log likelihood: -3517577.071006
EM: Round [188] log likelihood: -3517577.070650
EM: Round [189] log likelihood: -3517577.070300
EM: Round [190] log likelihood: -3517577.069955
EM: Round [191] log likelihood: -3517577.069616
EM: Round [192] log likelihood: -3517577.069281
EM: Round [193] log likelihood: -3517577.068952
EM: Round [194] log likelihood: -3517577.068627
EM: Round [195] log likelihood: -3517577.068308
EM: Round [196] log likelihood: -3517577.067992
EM: Round [197] log likelihood: -3517577.067682
EM: Round [198] log likelihood: -3517577.067376
EM: Round [199] log likelihood: -3517577.067074
EM: Round [200] log likelihood: -3517577.066777
EM: Round [201] log likelihood: -3517577.066484
EM: Round [202] log likelihood: -3517577.066195
EM: Round [203] log likelihood: -3517577.065911
EM: Round [204] log likelihood: -3517577.065630
EM: Round [205] log likelihood: -3517577.065353
EM: Round [206] log likelihood: -3517577.065080
EM: Round [207] log likelihood: -3517577.064811
EM: Round [208] log likelihood: -3517577.064545
EM: Round [209] log likelihood: -3517577.064283
EM: Round [210] log likelihood: -3517577.064024
EM: Round [211] log likelihood: -3517577.063769
EM: Round [212] log likelihood: -3517577.063518
EM: Round [213] log likelihood: -3517577.063270
EM: Round [214] log likelihood: -3517577.063025
EM: Round [215] log likelihood: -3517577.062783
EM: Round [216] log likelihood: -3517577.062544
EM: Round [217] log likelihood: -3517577.062309
EM: Round [218] log likelihood: -3517577.062076
EM: Round [219] log likelihood: -3517577.061847
EM: Round [220] log likelihood: -3517577.061620
EM: Round [221] log likelihood: -3517577.061396
EM: Round [222] log likelihood: -3517577.061176
EM: Round [223] log likelihood: -3517577.060958
EM: Round [224] log likelihood: -3517577.060742
EM: Round [225] log likelihood: -3517577.060530
EM: Round [226] log likelihood: -3517577.060319
EM: Round [227] log likelihood: -3517577.060112
EM: Round [228] log likelihood: -3517577.059907
EM: Round [229] log likelihood: -3517577.059705
EM: Round [230] log likelihood: -3517577.059505
EM: Round [231] log likelihood: -3517577.059307
EM: Round [232] log likelihood: -3517577.059112
EM: Round [233] log likelihood: -3517577.058919
EM: Round [234] log likelihood: -3517577.058729
EM: Round [235] log likelihood: -3517577.058540
EM: Round [236] log likelihood: -3517577.058354
EM: Round [237] log likelihood: -3517577.058170
EM: Round [238] log likelihood: -3517577.057989
EM: Round [239] log likelihood: -3517577.057809
EM: Round [240] log likelihood: -3517577.057631
EM: Round [241] log likelihood: -3517577.057456
EM: Round [242] log likelihood: -3517577.057282
EM: Round [243] log likelihood: -3517577.057111
EM: Round [244] log likelihood: -3517577.056941
EM: Round [245] log likelihood: -3517577.056774
EM: Round [246] log likelihood: -3517577.056608
EM: Round [247] log likelihood: -3517577.056444
EM: Round [248] log likelihood: -3517577.056282
EM: Round [249] log likelihood: -3517577.056121
EM: Round [250] log likelihood: -3517577.055963
EM: Round [251] log likelihood: -3517577.055806
EM: Round [252] log likelihood: -3517577.055651
EM: Round [253] log likelihood: -3517577.055498
EM: Round [254] log likelihood: -3517577.055346
EM: Round [255] log likelihood: -3517577.055196
EM: Round [256] log likelihood: -3517577.055047
EM: Round [257] log likelihood: -3517577.054900
EM: Round [258] log likelihood: -3517577.054755
EM: Round [259] log likelihood: -3517577.054611
EM: Round [260] log likelihood: -3517577.054469
EM: Round [261] log likelihood: -3517577.054328
EM: Round [262] log likelihood: -3517577.054189
EM: Round [263] log likelihood: -3517577.054051
EM: Round [264] log likelihood: -3517577.053915
EM: Round [265] log likelihood: -3517577.053780
EM: Round [266] log likelihood: -3517577.053646
EM: Round [267] log likelihood: -3517577.053514
EM: Round [268] log likelihood: -3517577.053383
EM: Round [269] log likelihood: -3517577.053253
EM: Round [270] log likelihood: -3517577.053125
EM: Round [271] log likelihood: -3517577.052998
EM: Round [272] log likelihood: -3517577.052872
EM: Round [273] log likelihood: -3517577.052748
EM: Round [274] log likelihood: -3517577.052625
EM: Round [275] log likelihood: -3517577.052503
EM: Round [276] log likelihood: -3517577.052382
EM: Round [277] log likelihood: -3517577.052263
EM: Round [278] log likelihood: -3517577.052144
EM: Round [279] log likelihood: -3517577.052027
EM: Round [280] log likelihood: -3517577.051911
EM: Round [281] log likelihood: -3517577.051796
EM: Round [282] log likelihood: -3517577.051683
EM: Round [283] log likelihood: -3517577.051570
EM: Round [284] log likelihood: -3517577.051458
EM: Round [285] log likelihood: -3517577.051348
EM: Round [286] log likelihood: -3517577.051238
EM: Round [287] log likelihood: -3517577.051130
EM: Round [288] log likelihood: -3517577.051022
EM: Round [289] log likelihood: -3517577.050916
EM: Round [290] log likelihood: -3517577.050811
EM: Round [291] log likelihood: -3517577.050706
EM: Round [292] log likelihood: -3517577.050603
EM: Round [293] log likelihood: -3517577.050501
EM: Round [294] log likelihood: -3517577.050399
EM: Round [295] log likelihood: -3517577.050299
EM: Round [296] log likelihood: -3517577.050199
EM: Stopping iterations at round 296 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.KVmV9hHFJy/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.KVmV9hHFJy/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.KVmV9hHFJy/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 293303435 > /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.KVmV9hHFJy/ctat_genome_lib_build_dir > /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.KVmV9hHFJy/ctat_genome_lib_build_dir --annotate /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.KVmV9hHFJy/ctat_genome_lib_build_dir
-done, see /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.KVmV9hHFJy/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 543, filtered: 4150)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.KVmV9hHFJy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.KVmV9hHFJy/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000231426.7]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
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WARNING, no entry stored in dbm for [ENSG00000203413.3]
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WARNING, no entry stored in dbm for [ENSG00000214433.4]
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WARNING, no entry stored in dbm for [ENSG00000285600.1]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000279821.1]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000181126.13]
WARNING, no entry stored in dbm for [ENSG00000285051.2]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000271538.6]
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WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000189149.12]
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WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000267196.1]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000249752.1]
WARNING, no entry stored in dbm for [ENSG00000286675.1]
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WARNING, no entry stored in dbm for [ENSG00000223544.1]
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WARNING, no entry stored in dbm for [ENSG00000236491.1]
WARNING, no entry stored in dbm for [ENSG00000223470.3]
WARNING, no entry stored in dbm for [ENSG00000250813.1]
WARNING, no entry stored in dbm for [ENSG00000225189.1]
WARNING, no entry stored in dbm for [ENSG00000225466.1]
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WARNING, no entry stored in dbm for [ENSG00000233396.8]
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WARNING, no entry stored in dbm for [ENSG00000272150.5]
WARNING, no entry stored in dbm for [ENSG00000268650.3]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
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WARNING, no entry stored in dbm for [ENSG00000256694.1]
WARNING, no entry stored in dbm for [ENSG00000219665.8]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000285331.2]
WARNING, no entry stored in dbm for [ENSG00000227598.1]
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WARNING, no entry stored in dbm for [ENSG00000271533.1]
WARNING, no entry stored in dbm for [ENSG00000228775.8]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000276740.1]
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WARNING, no entry stored in dbm for [ENSG00000275139.1]
WARNING, no entry stored in dbm for [ENSG00000257511.1]
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WARNING, no entry stored in dbm for [ENSG00000285280.2]
WARNING, no entry stored in dbm for [ENSG00000259429.5]
WARNING, no entry stored in dbm for [ENSG00000286572.1]
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WARNING, no entry stored in dbm for [ENSG00000212664.5]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000240549.2]
WARNING, no entry stored in dbm for [ENSG00000234801.3]
WARNING, no entry stored in dbm for [ENSG00000226470.1]
WARNING, no entry stored in dbm for [ENSG00000226377.2]
WARNING, no entry stored in dbm for [ENSG00000259357.2]
WARNING, no entry stored in dbm for [ENSG00000233515.2]
WARNING, no entry stored in dbm for [ENSG00000280415.1]
WARNING, no entry stored in dbm for [ENSG00000225662.2]
WARNING, no entry stored in dbm for [ENSG00000226625.1]
WARNING, no entry stored in dbm for [ENSG00000214765.8]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000276721.1]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000209482.1]
WARNING, no entry stored in dbm for [ENSG00000227906.8]
WARNING, no entry stored in dbm for [ENSG00000261490.1]
WARNING, no entry stored in dbm for [ENSG00000264057.1]
WARNING, no entry stored in dbm for [ENSG00000268170.2]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000281641.3]
WARNING, no entry stored in dbm for [ENSG00000265688.2]
WARNING, no entry stored in dbm for [ENSG00000230929.5]
WARNING, no entry stored in dbm for [ENSG00000242445.1]
WARNING, no entry stored in dbm for [ENSG00000248843.1]
WARNING, no entry stored in dbm for [ENSG00000236801.1]
WARNING, no entry stored in dbm for [ENSG00000244237.1]
WARNING, no entry stored in dbm for [ENSG00000250514.1]
WARNING, no entry stored in dbm for [ENSG00000225189.1]
WARNING, no entry stored in dbm for [ENSG00000225466.1]
WARNING, no entry stored in dbm for [ENSG00000214019.2]
WARNING, no entry stored in dbm for [ENSG00000248724.6]
WARNING, no entry stored in dbm for [ENSG00000235244.4]
WARNING, no entry stored in dbm for [ENSG00000258977.2]
WARNING, no entry stored in dbm for [ENSG00000117242.7]
WARNING, no entry stored in dbm for [ENSG00000244625.7]
WARNING, no entry stored in dbm for [ENSG00000177197.7]
WARNING, no entry stored in dbm for [ENSG00000244540.2]
WARNING, no entry stored in dbm for [ENSG00000268204.1]
WARNING, no entry stored in dbm for [ENSG00000228060.3]
WARNING, no entry stored in dbm for [ENSG00000183444.10]
WARNING, no entry stored in dbm for [ENSG00000205847.6]
WARNING, no entry stored in dbm for [ENSG00000287765.1]
WARNING, no entry stored in dbm for [ENSG00000267478.1]
WARNING, no entry stored in dbm for [ENSG00000226703.1]
WARNING, no entry stored in dbm for [ENSG00000248578.1]
WARNING, no entry stored in dbm for [ENSG00000274002.1]
WARNING, no entry stored in dbm for [ENSG00000242073.2]
WARNING, no entry stored in dbm for [ENSG00000228703.1]
WARNING, no entry stored in dbm for [ENSG00000272941.1]
WARNING, no entry stored in dbm for [ENSG00000227173.1]
WARNING, no entry stored in dbm for [ENSG00000224769.1]
WARNING, no entry stored in dbm for [ENSG00000288549.1]
WARNING, no entry stored in dbm for [ENSG00000180764.13]
WARNING, no entry stored in dbm for [ENSG00000284311.1]
WARNING, no entry stored in dbm for [ENSG00000203446.2]
WARNING, no entry stored in dbm for [ENSG00000264589.4]
WARNING, no entry stored in dbm for [ENSG00000100181.22]
WARNING, no entry stored in dbm for [ENSG00000284428.1]
WARNING, no entry stored in dbm for [ENSG00000254401.2]
WARNING, no entry stored in dbm for [ENSG00000232591.2]
WARNING, no entry stored in dbm for [ENSG00000224910.2]
WARNING, no entry stored in dbm for [ENSG00000212694.8]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000231535.7]
WARNING, no entry stored in dbm for [ENSG00000241525.4]
WARNING, no entry stored in dbm for [ENSG00000237854.3]
WARNING, no entry stored in dbm for [ENSG00000229163.2]
WARNING, no entry stored in dbm for [ENSG00000269378.1]
WARNING, no entry stored in dbm for [ENSG00000227811.3]
WARNING, no entry stored in dbm for [ENSG00000273419.1]
WARNING, no entry stored in dbm for [ENSG00000240707.3]
WARNING, no entry stored in dbm for [ENSG00000235821.1]
WARNING, no entry stored in dbm for [ENSG00000258676.5]
WARNING, no entry stored in dbm for [ENSG00000277072.5]
WARNING, no entry stored in dbm for [ENSG00000214223.4]
WARNING, no entry stored in dbm for [ENSG00000206149.10]
WARNING, no entry stored in dbm for [ENSG00000261377.5]
WARNING, no entry stored in dbm for [ENSG00000259845.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000260109.1]
WARNING, no entry stored in dbm for [ENSG00000253816.3]
WARNING, no entry stored in dbm for [ENSG00000224458.3]
WARNING, no entry stored in dbm for [ENSG00000253816.3]
WARNING, no entry stored in dbm for [ENSG00000244383.2]
WARNING, no entry stored in dbm for [ENSG00000227145.2]
WARNING, no entry stored in dbm for [ENSG00000215866.8]
WARNING, no entry stored in dbm for [ENSG00000238225.1]
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WARNING, no entry stored in dbm for [ENSG00000224858.5]
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WARNING, no entry stored in dbm for [ENSG00000226407.1]
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WARNING, no entry stored in dbm for [ENSG00000229132.2]
WARNING, no entry stored in dbm for [ENSG00000238272.1]
WARNING, no entry stored in dbm for [ENSG00000229256.1]
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WARNING, no entry stored in dbm for [ENSG00000271249.1]
WARNING, no entry stored in dbm for [ENSG00000264569.1]
WARNING, no entry stored in dbm for [ENSG00000287041.1]
WARNING, no entry stored in dbm for [ENSG00000235244.4]
WARNING, no entry stored in dbm for [ENSG00000228192.8]
WARNING, no entry stored in dbm for [ENSG00000285707.1]
WARNING, no entry stored in dbm for [ENSG00000196167.10]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000235027.1]
WARNING, no entry stored in dbm for [ENSG00000227617.9]
WARNING, no entry stored in dbm for [ENSG00000246366.6]
WARNING, no entry stored in dbm for [ENSG00000227676.4]
WARNING, no entry stored in dbm for [ENSG00000268170.2]
WARNING, no entry stored in dbm for [ENSG00000240116.3]
WARNING, no entry stored in dbm for [ENSG00000213592.4]
WARNING, no entry stored in dbm for [ENSG00000236832.1]
WARNING, no entry stored in dbm for [ENSG00000262468.6]
WARNING, no entry stored in dbm for [ENSG00000285823.1]
WARNING, no entry stored in dbm for [ENSG00000224775.2]
WARNING, no entry stored in dbm for [ENSG00000238153.1]
WARNING, no entry stored in dbm for [ENSG00000255450.1]
WARNING, no entry stored in dbm for [ENSG00000250922.1]
WARNING, no entry stored in dbm for [ENSG00000228956.8]
WARNING, no entry stored in dbm for [ENSG00000269937.1]
WARNING, no entry stored in dbm for [ENSG00000267108.1]
WARNING, no entry stored in dbm for [ENSG00000233355.7]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000178082.6]
WARNING, no entry stored in dbm for [ENSG00000288107.1]
WARNING, no entry stored in dbm for [ENSG00000270094.1]
WARNING, no entry stored in dbm for [ENSG00000287078.1]
WARNING, no entry stored in dbm for [ENSG00000224251.6]
WARNING, no entry stored in dbm for [ENSG00000285280.2]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000227678.8]
WARNING, no entry stored in dbm for [ENSG00000286330.1]
WARNING, no entry stored in dbm for [ENSG00000285269.2]
WARNING, no entry stored in dbm for [ENSG00000267026.5]
WARNING, no entry stored in dbm for [ENSG00000244265.2]
WARNING, no entry stored in dbm for [ENSG00000258959.2]
WARNING, no entry stored in dbm for [ENSG00000234748.1]
WARNING, no entry stored in dbm for [ENSG00000213598.4]
WARNING, no entry stored in dbm for [ENSG00000263266.2]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000279080.1]
WARNING, no entry stored in dbm for [ENSG00000249593.6]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000226945.1]
WARNING, no entry stored in dbm for [ENSG00000273257.2]
WARNING, no entry stored in dbm for [ENSG00000258416.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000279375.1]
WARNING, no entry stored in dbm for [ENSG00000259515.1]
WARNING, no entry stored in dbm for [ENSG00000279375.1]
WARNING, no entry stored in dbm for [ENSG00000280193.1]
WARNING, no entry stored in dbm for [ENSG00000279047.4]
WARNING, no entry stored in dbm for [ENSG00000259515.1]
WARNING, no entry stored in dbm for [ENSG00000279047.4]
WARNING, no entry stored in dbm for [ENSG00000280193.1]
WARNING, no entry stored in dbm for [ENSG00000272154.5]
WARNING, no entry stored in dbm for [ENSG00000280193.1]
WARNING, no entry stored in dbm for [ENSG00000274615.1]
WARNING, no entry stored in dbm for [ENSG00000159712.10]
WARNING, no entry stored in dbm for [ENSG00000242073.2]
WARNING, no entry stored in dbm for [ENSG00000275902.1]
WARNING, no entry stored in dbm for [ENSG00000280213.1]
WARNING, no entry stored in dbm for [ENSG00000260563.3]
WARNING, no entry stored in dbm for [ENSG00000285736.1]
WARNING, no entry stored in dbm for [ENSG00000219410.6]
WARNING, no entry stored in dbm for [ENSG00000225662.2]
WARNING, no entry stored in dbm for [ENSG00000240695.1]
WARNING, no entry stored in dbm for [ENSG00000242876.3]
WARNING, no entry stored in dbm for [ENSG00000284675.1]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000176349.11]
WARNING, no entry stored in dbm for [ENSG00000235831.7]
WARNING, no entry stored in dbm for [ENSG00000282375.1]
WARNING, no entry stored in dbm for [ENSG00000287431.1]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000284610.1]
WARNING, no entry stored in dbm for [ENSG00000249741.2]
WARNING, no entry stored in dbm for [ENSG00000246394.7]
WARNING, no entry stored in dbm for [ENSG00000226886.1]
WARNING, no entry stored in dbm for [ENSG00000164669.13]
WARNING, no entry stored in dbm for [ENSG00000248714.7]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000261232.2]
WARNING, no entry stored in dbm for [ENSG00000259347.7]
WARNING, no entry stored in dbm for [ENSG00000266980.1]
WARNING, no entry stored in dbm for [ENSG00000239985.2]
WARNING, no entry stored in dbm for [ENSG00000279605.1]
WARNING, no entry stored in dbm for [ENSG00000259299.1]
WARNING, no entry stored in dbm for [ENSG00000257530.1]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000276332.1]
WARNING, no entry stored in dbm for [ENSG00000261303.6]
WARNING, no entry stored in dbm for [ENSG00000223698.3]
WARNING, no entry stored in dbm for [ENSG00000261303.6]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000260276.2]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000231409.3]
WARNING, no entry stored in dbm for [ENSG00000242087.2]
WARNING, no entry stored in dbm for [ENSG00000233223.3]
WARNING, no entry stored in dbm for [ENSG00000237844.2]
WARNING, no entry stored in dbm for [ENSG00000286030.2]
WARNING, no entry stored in dbm for [ENSG00000186148.13]
WARNING, no entry stored in dbm for [ENSG00000240401.9]
WARNING, no entry stored in dbm for [ENSG00000268543.1]
WARNING, no entry stored in dbm for [ENSG00000272667.1]
WARNING, no entry stored in dbm for [ENSG00000267383.7]
WARNING, no entry stored in dbm for [ENSG00000255106.1]
WARNING, no entry stored in dbm for [ENSG00000241741.1]
WARNING, no entry stored in dbm for [ENSG00000268119.6]
WARNING, no entry stored in dbm for [ENSG00000282890.1]
WARNING, no entry stored in dbm for [ENSG00000068781.21]
WARNING, no entry stored in dbm for [ENSG00000250407.1]
WARNING, no entry stored in dbm for [ENSG00000269392.1]
WARNING, no entry stored in dbm for [ENSG00000260139.6]
WARNING, no entry stored in dbm for [ENSG00000280007.1]
WARNING, no entry stored in dbm for [ENSG00000279467.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000237835.1]
WARNING, no entry stored in dbm for [ENSG00000258891.1]
WARNING, no entry stored in dbm for [ENSG00000224699.9]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000284605.1]
WARNING, no entry stored in dbm for [ENSG00000235776.2]
WARNING, no entry stored in dbm for [ENSG00000242248.2]
WARNING, no entry stored in dbm for [ENSG00000279232.2]
WARNING, no entry stored in dbm for [ENSG00000245105.4]
WARNING, no entry stored in dbm for [ENSG00000267424.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.KVmV9hHFJy/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)