Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4d/606ee54fbe4fe48586165bd2c1319a/1173_GFO_T1_RNA_SLD_01_A23T55JLT4_2.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/12/9d9573d7f279568c8aa6da877ec7a1/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/12/9d9573d7f279568c8aa6da877ec7a1/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory