File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/33/93e7e0466d38633801634d24a104cd/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 11:18:45
                             Started mapping on |	Jun 08 11:25:17
                                    Finished on |	Jun 08 12:09:21
       Mapping speed, Million of reads per hour |	400.94

                          Number of input reads |	294468238
                      Average input read length |	220
                                    UNIQUE READS:
                   Uniquely mapped reads number |	280381545
                        Uniquely mapped reads % |	95.22%
                          Average mapped length |	218.95
                       Number of splices: Total |	235869335
            Number of splices: Annotated (sjdb) |	232784370
                       Number of splices: GT/AG |	233391759
                       Number of splices: GC/AG |	1456982
                       Number of splices: AT/AC |	192222
               Number of splices: Non-canonical |	828372
                      Mismatch rate per base, % |	0.22%
                         Deletion rate per base |	0.02%
                        Deletion average length |	1.95
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.60
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	9047272
             % of reads mapped to multiple loci |	3.07%
        Number of reads mapped to too many loci |	573213
             % of reads mapped to too many loci |	0.19%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	3883330
                 % of reads unmapped: too short |	1.32%
                Number of reads unmapped: other |	582878
                     % of reads unmapped: other |	0.20%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%