Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/47/8e7a9953c007203db54007e11471f4/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d8/624db605cbf23c0af06ffdb948d72d/1173_NFO_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/47/8e7a9953c007203db54007e11471f4/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/3604ec2b54cfe165c86d6c9811d38d/1173_NFO_T1_RNA_SLD_01_A23T55JLT4_2_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/3604ec2b54cfe165c86d6c9811d38d/1173_NFO_T1_RNA_SLD_01_A23T55JLT4_2_1.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.FdE5odzjaH/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.FdE5odzjaH/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary
-sample contains 217243972 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.FdE5odzjaH/ctat_genome_lib_build_dir  -J /tmp/nxf.FdE5odzjaH/1173_NFO_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction  -O /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.FdE5odzjaH/1173_NFO_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.FdE5odzjaH/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[3340000], rate=80385.08/min -building interval tree based on /tmp/nxf.FdE5odzjaH/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[3300000], rate=53340.52/min 
[3310000], rate=53415.81/min -building interval tree based on /tmp/nxf.FdE5odzjaH/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=60000.00/min 
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[2680000], rate=43260.69/min 
[2690000], rate=43352.14/min 
[2700000], rate=43443.28/min 
[2710000], rate=43545.80/min 
-building interval tree based on /tmp/nxf.FdE5odzjaH/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=120000.00/min 
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[30000], rate=120000.00/min 
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[1490000], rate=55219.27/min 
[1500000], rate=54446.46/min 
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[2000000], rate=38387.72/min 
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[3300000], rate=39465.82/min 
[3310000], rate=39459.57/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.FdE5odzjaH/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
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 6000000.00 reads per min processed...  
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 5889908.26 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.FdE5odzjaH/1173_NFO_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.FdE5odzjaH/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -480041.953491
EM: Round [1] log likelihood: -479520.158875
EM: Round [2] log likelihood: -479326.871842
EM: Round [3] log likelihood: -479235.173078
EM: Round [4] log likelihood: -479186.567642
EM: Round [5] log likelihood: -479159.247123
EM: Round [6] log likelihood: -479143.213863
EM: Round [7] log likelihood: -479133.407786
EM: Round [8] log likelihood: -479127.152586
EM: Round [9] log likelihood: -479122.993398
EM: Round [10] log likelihood: -479120.117735
EM: Round [11] log likelihood: -479118.057923
EM: Round [12] log likelihood: -479116.535758
EM: Round [13] log likelihood: -479115.380018
EM: Round [14] log likelihood: -479114.481727
EM: Round [15] log likelihood: -479113.769275
EM: Round [16] log likelihood: -479113.194199
EM: Round [17] log likelihood: -479112.722817
EM: Round [18] log likelihood: -479112.331159
EM: Round [19] log likelihood: -479112.001804
EM: Round [20] log likelihood: -479111.721857
EM: Round [21] log likelihood: -479111.481608
EM: Round [22] log likelihood: -479111.273643
EM: Round [23] log likelihood: -479111.092218
EM: Round [24] log likelihood: -479110.932830
EM: Round [25] log likelihood: -479110.791910
EM: Round [26] log likelihood: -479110.666595
EM: Round [27] log likelihood: -479110.554570
EM: Round [28] log likelihood: -479110.453944
EM: Round [29] log likelihood: -479110.363158
EM: Round [30] log likelihood: -479110.280921
EM: Round [31] log likelihood: -479110.206151
EM: Round [32] log likelihood: -479110.137938
EM: Round [33] log likelihood: -479110.075510
EM: Round [34] log likelihood: -479110.018211
EM: Round [35] log likelihood: -479109.965476
EM: Round [36] log likelihood: -479109.916821
EM: Round [37] log likelihood: -479109.871825
EM: Round [38] log likelihood: -479109.830121
EM: Round [39] log likelihood: -479109.791390
EM: Round [40] log likelihood: -479109.755352
EM: Round [41] log likelihood: -479109.721758
EM: Round [42] log likelihood: -479109.690390
EM: Round [43] log likelihood: -479109.661053
EM: Round [44] log likelihood: -479109.633575
EM: Round [45] log likelihood: -479109.607800
EM: Round [46] log likelihood: -479109.583590
EM: Round [47] log likelihood: -479109.560820
EM: Round [48] log likelihood: -479109.539378
EM: Round [49] log likelihood: -479109.519162
EM: Round [50] log likelihood: -479109.500079
EM: Round [51] log likelihood: -479109.482048
EM: Round [52] log likelihood: -479109.464990
EM: Round [53] log likelihood: -479109.448838
EM: Round [54] log likelihood: -479109.433527
EM: Round [55] log likelihood: -479109.419000
EM: Round [56] log likelihood: -479109.405204
EM: Round [57] log likelihood: -479109.392089
EM: Round [58] log likelihood: -479109.379612
EM: Round [59] log likelihood: -479109.367730
EM: Round [60] log likelihood: -479109.356407
EM: Round [61] log likelihood: -479109.345606
EM: Round [62] log likelihood: -479109.335295
EM: Round [63] log likelihood: -479109.325445
EM: Round [64] log likelihood: -479109.316028
EM: Round [65] log likelihood: -479109.307017
EM: Round [66] log likelihood: -479109.298389
EM: Round [67] log likelihood: -479109.290121
EM: Round [68] log likelihood: -479109.282194
EM: Round [69] log likelihood: -479109.274588
EM: Round [70] log likelihood: -479109.267285
EM: Round [71] log likelihood: -479109.260268
EM: Round [72] log likelihood: -479109.253521
EM: Round [73] log likelihood: -479109.247031
EM: Round [74] log likelihood: -479109.240784
EM: Round [75] log likelihood: -479109.234767
EM: Round [76] log likelihood: -479109.228968
EM: Round [77] log likelihood: -479109.223376
EM: Round [78] log likelihood: -479109.217981
EM: Round [79] log likelihood: -479109.212772
EM: Round [80] log likelihood: -479109.207742
EM: Round [81] log likelihood: -479109.202880
EM: Round [82] log likelihood: -479109.198180
EM: Round [83] log likelihood: -479109.193633
EM: Round [84] log likelihood: -479109.189233
EM: Round [85] log likelihood: -479109.184972
EM: Round [86] log likelihood: -479109.180844
EM: Round [87] log likelihood: -479109.176844
EM: Round [88] log likelihood: -479109.172966
EM: Round [89] log likelihood: -479109.169204
EM: Round [90] log likelihood: -479109.165553
EM: Round [91] log likelihood: -479109.162009
EM: Round [92] log likelihood: -479109.158568
EM: Round [93] log likelihood: -479109.155224
EM: Round [94] log likelihood: -479109.151974
EM: Round [95] log likelihood: -479109.148815
EM: Round [96] log likelihood: -479109.145743
EM: Round [97] log likelihood: -479109.142753
EM: Round [98] log likelihood: -479109.139844
EM: Round [99] log likelihood: -479109.137011
EM: Round [100] log likelihood: -479109.134253
EM: Round [101] log likelihood: -479109.131566
EM: Round [102] log likelihood: -479109.128948
EM: Round [103] log likelihood: -479109.126396
EM: Round [104] log likelihood: -479109.123908
EM: Round [105] log likelihood: -479109.121481
EM: Round [106] log likelihood: -479109.119114
EM: Round [107] log likelihood: -479109.116805
EM: Round [108] log likelihood: -479109.114550
EM: Round [109] log likelihood: -479109.112350
EM: Round [110] log likelihood: -479109.110201
EM: Round [111] log likelihood: -479109.108102
EM: Round [112] log likelihood: -479109.106052
EM: Round [113] log likelihood: -479109.104049
EM: Round [114] log likelihood: -479109.102091
EM: Round [115] log likelihood: -479109.100178
EM: Round [116] log likelihood: -479109.098307
EM: Round [117] log likelihood: -479109.096477
EM: Round [118] log likelihood: -479109.094688
EM: Round [119] log likelihood: -479109.092938
EM: Round [120] log likelihood: -479109.091225
EM: Round [121] log likelihood: -479109.089549
EM: Round [122] log likelihood: -479109.087909
EM: Round [123] log likelihood: -479109.086304
EM: Round [124] log likelihood: -479109.084732
EM: Round [125] log likelihood: -479109.083193
EM: Round [126] log likelihood: -479109.081686
EM: Round [127] log likelihood: -479109.080210
EM: Round [128] log likelihood: -479109.078764
EM: Round [129] log likelihood: -479109.077348
EM: Round [130] log likelihood: -479109.075960
EM: Round [131] log likelihood: -479109.074600
EM: Round [132] log likelihood: -479109.073267
EM: Round [133] log likelihood: -479109.071960
EM: Round [134] log likelihood: -479109.070680
EM: Round [135] log likelihood: -479109.069424
EM: Round [136] log likelihood: -479109.068193
EM: Round [137] log likelihood: -479109.066986
EM: Round [138] log likelihood: -479109.065802
EM: Round [139] log likelihood: -479109.064641
EM: Round [140] log likelihood: -479109.063503
EM: Round [141] log likelihood: -479109.062385
EM: Round [142] log likelihood: -479109.061290
EM: Round [143] log likelihood: -479109.060214
EM: Round [144] log likelihood: -479109.059159
EM: Round [145] log likelihood: -479109.058124
EM: Round [146] log likelihood: -479109.057108
EM: Round [147] log likelihood: -479109.056111
EM: Round [148] log likelihood: -479109.055132
EM: Round [149] log likelihood: -479109.054172
EM: Round [150] log likelihood: -479109.053229
EM: Round [151] log likelihood: -479109.052303
EM: Round [152] log likelihood: -479109.051394
EM: Round [153] log likelihood: -479109.050502
EM: Round [154] log likelihood: -479109.049626
EM: Round [155] log likelihood: -479109.048765
EM: Round [156] log likelihood: -479109.047920
EM: Round [157] log likelihood: -479109.047091
EM: Round [158] log likelihood: -479109.046276
EM: Round [159] log likelihood: -479109.045475
EM: Round [160] log likelihood: -479109.044689
EM: Round [161] log likelihood: -479109.043917
EM: Round [162] log likelihood: -479109.043158
EM: Round [163] log likelihood: -479109.042413
EM: Round [164] log likelihood: -479109.041681
EM: Round [165] log likelihood: -479109.040962
EM: Round [166] log likelihood: -479109.040255
EM: Round [167] log likelihood: -479109.039560
EM: Round [168] log likelihood: -479109.038878
EM: Round [169] log likelihood: -479109.038208
EM: Round [170] log likelihood: -479109.037549
EM: Round [171] log likelihood: -479109.036901
EM: Round [172] log likelihood: -479109.036265
EM: Round [173] log likelihood: -479109.035640
EM: Round [174] log likelihood: -479109.035025
EM: Round [175] log likelihood: -479109.034421
EM: Round [176] log likelihood: -479109.033827
EM: Round [177] log likelihood: -479109.033243
EM: Round [178] log likelihood: -479109.032670
EM: Round [179] log likelihood: -479109.032106
EM: Round [180] log likelihood: -479109.031551
EM: Round [181] log likelihood: -479109.031006
EM: Round [182] log likelihood: -479109.030470
EM: Round [183] log likelihood: -479109.029944
EM: Round [184] log likelihood: -479109.029426
EM: Round [185] log likelihood: -479109.028917
EM: Round [186] log likelihood: -479109.028416
EM: Round [187] log likelihood: -479109.027924
EM: Round [188] log likelihood: -479109.027440
EM: Round [189] log likelihood: -479109.026964
EM: Round [190] log likelihood: -479109.026496
EM: Round [191] log likelihood: -479109.026036
EM: Round [192] log likelihood: -479109.025583
EM: Round [193] log likelihood: -479109.025138
EM: Round [194] log likelihood: -479109.024701
EM: Round [195] log likelihood: -479109.024270
EM: Round [196] log likelihood: -479109.023847
EM: Round [197] log likelihood: -479109.023431
EM: Round [198] log likelihood: -479109.023021
EM: Round [199] log likelihood: -479109.022619
EM: Round [200] log likelihood: -479109.022223
EM: Round [201] log likelihood: -479109.021833
EM: Round [202] log likelihood: -479109.021450
EM: Round [203] log likelihood: -479109.021073
EM: Round [204] log likelihood: -479109.020703
EM: Round [205] log likelihood: -479109.020338
EM: Round [206] log likelihood: -479109.019979
EM: Round [207] log likelihood: -479109.019627
EM: Round [208] log likelihood: -479109.019280
EM: Round [209] log likelihood: -479109.018938
EM: Round [210] log likelihood: -479109.018602
EM: Round [211] log likelihood: -479109.018272
EM: Round [212] log likelihood: -479109.017947
EM: Round [213] log likelihood: -479109.017627
EM: Round [214] log likelihood: -479109.017313
EM: Round [215] log likelihood: -479109.017003
EM: Round [216] log likelihood: -479109.016699
EM: Round [217] log likelihood: -479109.016399
EM: Round [218] log likelihood: -479109.016105
EM: Round [219] log likelihood: -479109.015815
EM: Round [220] log likelihood: -479109.015530
EM: Round [221] log likelihood: -479109.015249
EM: Round [222] log likelihood: -479109.014973
EM: Round [223] log likelihood: -479109.014701
EM: Round [224] log likelihood: -479109.014434
EM: Round [225] log likelihood: -479109.014171
EM: Round [226] log likelihood: -479109.013912
EM: Round [227] log likelihood: -479109.013657
EM: Round [228] log likelihood: -479109.013406
EM: Round [229] log likelihood: -479109.013160
EM: Round [230] log likelihood: -479109.012917
EM: Round [231] log likelihood: -479109.012678
EM: Round [232] log likelihood: -479109.012443
EM: Round [233] log likelihood: -479109.012212
EM: Round [234] log likelihood: -479109.011985
EM: Round [235] log likelihood: -479109.011761
EM: Round [236] log likelihood: -479109.011540
EM: Round [237] log likelihood: -479109.011323
EM: Round [238] log likelihood: -479109.011110
EM: Round [239] log likelihood: -479109.010900
EM: Round [240] log likelihood: -479109.010693
EM: Round [241] log likelihood: -479109.010490
EM: Round [242] log likelihood: -479109.010289
EM: Round [243] log likelihood: -479109.010092
EM: Round [244] log likelihood: -479109.009898
EM: Round [245] log likelihood: -479109.009707
EM: Round [246] log likelihood: -479109.009520
EM: Round [247] log likelihood: -479109.009335
EM: Round [248] log likelihood: -479109.009153
EM: Round [249] log likelihood: -479109.008973
EM: Round [250] log likelihood: -479109.008797
EM: Round [251] log likelihood: -479109.008624
EM: Round [252] log likelihood: -479109.008453
EM: Round [253] log likelihood: -479109.008285
EM: Round [254] log likelihood: -479109.008119
EM: Round [255] log likelihood: -479109.007956
EM: Round [256] log likelihood: -479109.007796
EM: Round [257] log likelihood: -479109.007638
EM: Round [258] log likelihood: -479109.007483
EM: Round [259] log likelihood: -479109.007330
EM: Round [260] log likelihood: -479109.007179
EM: Round [261] log likelihood: -479109.007031
EM: Round [262] log likelihood: -479109.006885
EM: Round [263] log likelihood: -479109.006741
EM: Round [264] log likelihood: -479109.006600
EM: Round [265] log likelihood: -479109.006461
EM: Round [266] log likelihood: -479109.006324
EM: Round [267] log likelihood: -479109.006189
EM: Round [268] log likelihood: -479109.006056
EM: Round [269] log likelihood: -479109.005925
EM: Round [270] log likelihood: -479109.005797
EM: Round [271] log likelihood: -479109.005670
EM: Round [272] log likelihood: -479109.005545
EM: Round [273] log likelihood: -479109.005422
EM: Round [274] log likelihood: -479109.005302
EM: Round [275] log likelihood: -479109.005183
EM: Round [276] log likelihood: -479109.005065
EM: Round [277] log likelihood: -479109.004950
EM: Round [278] log likelihood: -479109.004836
EM: Round [279] log likelihood: -479109.004725
EM: Round [280] log likelihood: -479109.004614
EM: Round [281] log likelihood: -479109.004506
EM: Round [282] log likelihood: -479109.004399
EM: Round [283] log likelihood: -479109.004294
EM: Round [284] log likelihood: -479109.004191
EM: Round [285] log likelihood: -479109.004089
EM: Round [286] log likelihood: -479109.003988
EM: Round [287] log likelihood: -479109.003890
EM: Stopping iterations at round 287 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -479523.601837
EM: Round [1] log likelihood: -479078.956091
EM: Round [2] log likelihood: -478920.984431
EM: Round [3] log likelihood: -478847.649442
EM: Round [4] log likelihood: -478809.256381
EM: Round [5] log likelihood: -478787.880712
EM: Round [6] log likelihood: -478775.441818
EM: Round [7] log likelihood: -478767.893446
EM: Round [8] log likelihood: -478763.114869
EM: Round [9] log likelihood: -478759.961986
EM: Round [10] log likelihood: -478757.799560
EM: Round [11] log likelihood: -478756.263512
EM: Round [12] log likelihood: -478755.138019
EM: Round [13] log likelihood: -478754.290695
EM: Round [14] log likelihood: -478753.637580
EM: Round [15] log likelihood: -478753.123726
EM: Round [16] log likelihood: -478752.712107
EM: Round [17] log likelihood: -478752.377110
EM: Round [18] log likelihood: -478752.100598
EM: Round [19] log likelihood: -478751.869452
EM: Round [20] log likelihood: -478751.674012
EM: Round [21] log likelihood: -478751.507044
EM: Round [22] log likelihood: -478751.363052
EM: Round [23] log likelihood: -478751.237803
EM: Round [24] log likelihood: -478751.128000
EM: Round [25] log likelihood: -478751.031047
EM: Round [26] log likelihood: -478750.944875
EM: Round [27] log likelihood: -478750.867823
EM: Round [28] log likelihood: -478750.798546
EM: Round [29] log likelihood: -478750.735944
EM: Round [30] log likelihood: -478750.679111
EM: Round [31] log likelihood: -478750.627296
EM: Round [32] log likelihood: -478750.579872
EM: Round [33] log likelihood: -478750.536311
EM: Round [34] log likelihood: -478750.496166
EM: Round [35] log likelihood: -478750.459059
EM: Round [36] log likelihood: -478750.424664
EM: Round [37] log likelihood: -478750.392702
EM: Round [38] log likelihood: -478750.362929
EM: Round [39] log likelihood: -478750.335137
EM: Round [40] log likelihood: -478750.309140
EM: Round [41] log likelihood: -478750.284777
EM: Round [42] log likelihood: -478750.261906
EM: Round [43] log likelihood: -478750.240400
EM: Round [44] log likelihood: -478750.220148
EM: Round [45] log likelihood: -478750.201047
EM: Round [46] log likelihood: -478750.183010
EM: Round [47] log likelihood: -478750.165955
EM: Round [48] log likelihood: -478750.149809
EM: Round [49] log likelihood: -478750.134506
EM: Round [50] log likelihood: -478750.119986
EM: Round [51] log likelihood: -478750.106196
EM: Round [52] log likelihood: -478750.093084
EM: Round [53] log likelihood: -478750.080607
EM: Round [54] log likelihood: -478750.068721
EM: Round [55] log likelihood: -478750.057390
EM: Round [56] log likelihood: -478750.046578
EM: Round [57] log likelihood: -478750.036253
EM: Round [58] log likelihood: -478750.026385
EM: Round [59] log likelihood: -478750.016946
EM: Round [60] log likelihood: -478750.007910
EM: Round [61] log likelihood: -478749.999255
EM: Round [62] log likelihood: -478749.990958
EM: Round [63] log likelihood: -478749.982999
EM: Round [64] log likelihood: -478749.975359
EM: Round [65] log likelihood: -478749.968020
EM: Round [66] log likelihood: -478749.960966
EM: Round [67] log likelihood: -478749.954182
EM: Round [68] log likelihood: -478749.947652
EM: Round [69] log likelihood: -478749.941365
EM: Round [70] log likelihood: -478749.935306
EM: Round [71] log likelihood: -478749.929466
EM: Round [72] log likelihood: -478749.923831
EM: Round [73] log likelihood: -478749.918393
EM: Round [74] log likelihood: -478749.913142
EM: Round [75] log likelihood: -478749.908068
EM: Round [76] log likelihood: -478749.903163
EM: Round [77] log likelihood: -478749.898420
EM: Round [78] log likelihood: -478749.893829
EM: Round [79] log likelihood: -478749.889386
EM: Round [80] log likelihood: -478749.885082
EM: Round [81] log likelihood: -478749.880911
EM: Round [82] log likelihood: -478749.876868
EM: Round [83] log likelihood: -478749.872947
EM: Round [84] log likelihood: -478749.869143
EM: Round [85] log likelihood: -478749.865450
EM: Round [86] log likelihood: -478749.861865
EM: Round [87] log likelihood: -478749.858382
EM: Round [88] log likelihood: -478749.854997
EM: Round [89] log likelihood: -478749.851706
EM: Round [90] log likelihood: -478749.848506
EM: Round [91] log likelihood: -478749.845393
EM: Round [92] log likelihood: -478749.842364
EM: Round [93] log likelihood: -478749.839415
EM: Round [94] log likelihood: -478749.836543
EM: Round [95] log likelihood: -478749.833745
EM: Round [96] log likelihood: -478749.831019
EM: Round [97] log likelihood: -478749.828363
EM: Round [98] log likelihood: -478749.825772
EM: Round [99] log likelihood: -478749.823246
EM: Round [100] log likelihood: -478749.820782
EM: Round [101] log likelihood: -478749.818377
EM: Round [102] log likelihood: -478749.816030
EM: Round [103] log likelihood: -478749.813738
EM: Round [104] log likelihood: -478749.811501
EM: Round [105] log likelihood: -478749.809315
EM: Round [106] log likelihood: -478749.807180
EM: Round [107] log likelihood: -478749.805094
EM: Round [108] log likelihood: -478749.803055
EM: Round [109] log likelihood: -478749.801061
EM: Round [110] log likelihood: -478749.799112
EM: Round [111] log likelihood: -478749.797206
EM: Round [112] log likelihood: -478749.795341
EM: Round [113] log likelihood: -478749.793517
EM: Round [114] log likelihood: -478749.791732
EM: Round [115] log likelihood: -478749.789985
EM: Round [116] log likelihood: -478749.788275
EM: Round [117] log likelihood: -478749.786601
EM: Round [118] log likelihood: -478749.784962
EM: Round [119] log likelihood: -478749.783356
EM: Round [120] log likelihood: -478749.781784
EM: Round [121] log likelihood: -478749.780243
EM: Round [122] log likelihood: -478749.778734
EM: Round [123] log likelihood: -478749.777255
EM: Round [124] log likelihood: -478749.775806
EM: Round [125] log likelihood: -478749.774386
EM: Round [126] log likelihood: -478749.772993
EM: Round [127] log likelihood: -478749.771628
EM: Round [128] log likelihood: -478749.770290
EM: Round [129] log likelihood: -478749.768977
EM: Round [130] log likelihood: -478749.767690
EM: Round [131] log likelihood: -478749.766428
EM: Round [132] log likelihood: -478749.765190
EM: Round [133] log likelihood: -478749.763975
EM: Round [134] log likelihood: -478749.762783
EM: Round [135] log likelihood: -478749.761614
EM: Round [136] log likelihood: -478749.760466
EM: Round [137] log likelihood: -478749.759340
EM: Round [138] log likelihood: -478749.758235
EM: Round [139] log likelihood: -478749.757150
EM: Round [140] log likelihood: -478749.756086
EM: Round [141] log likelihood: -478749.755040
EM: Round [142] log likelihood: -478749.754014
EM: Round [143] log likelihood: -478749.753007
EM: Round [144] log likelihood: -478749.752017
EM: Round [145] log likelihood: -478749.751046
EM: Round [146] log likelihood: -478749.750092
EM: Round [147] log likelihood: -478749.749155
EM: Round [148] log likelihood: -478749.748235
EM: Round [149] log likelihood: -478749.747331
EM: Round [150] log likelihood: -478749.746443
EM: Round [151] log likelihood: -478749.745571
EM: Round [152] log likelihood: -478749.744714
EM: Round [153] log likelihood: -478749.743873
EM: Round [154] log likelihood: -478749.743046
EM: Round [155] log likelihood: -478749.742233
EM: Round [156] log likelihood: -478749.741435
EM: Round [157] log likelihood: -478749.740650
EM: Round [158] log likelihood: -478749.739880
EM: Round [159] log likelihood: -478749.739122
EM: Round [160] log likelihood: -478749.738377
EM: Round [161] log likelihood: -478749.737646
EM: Round [162] log likelihood: -478749.736927
EM: Round [163] log likelihood: -478749.736220
EM: Round [164] log likelihood: -478749.735525
EM: Round [165] log likelihood: -478749.734842
EM: Round [166] log likelihood: -478749.734171
EM: Round [167] log likelihood: -478749.733511
EM: Round [168] log likelihood: -478749.732862
EM: Round [169] log likelihood: -478749.732224
EM: Round [170] log likelihood: -478749.731597
EM: Round [171] log likelihood: -478749.730981
EM: Round [172] log likelihood: -478749.730375
EM: Round [173] log likelihood: -478749.729779
EM: Round [174] log likelihood: -478749.729193
EM: Round [175] log likelihood: -478749.728616
EM: Round [176] log likelihood: -478749.728050
EM: Round [177] log likelihood: -478749.727493
EM: Round [178] log likelihood: -478749.726945
EM: Round [179] log likelihood: -478749.726406
EM: Round [180] log likelihood: -478749.725876
EM: Round [181] log likelihood: -478749.725355
EM: Round [182] log likelihood: -478749.724843
EM: Round [183] log likelihood: -478749.724339
EM: Round [184] log likelihood: -478749.723843
EM: Round [185] log likelihood: -478749.723355
EM: Round [186] log likelihood: -478749.722876
EM: Round [187] log likelihood: -478749.722404
EM: Round [188] log likelihood: -478749.721940
EM: Round [189] log likelihood: -478749.721484
EM: Round [190] log likelihood: -478749.721035
EM: Round [191] log likelihood: -478749.720593
EM: Round [192] log likelihood: -478749.720159
EM: Round [193] log likelihood: -478749.719732
EM: Round [194] log likelihood: -478749.719311
EM: Round [195] log likelihood: -478749.718898
EM: Round [196] log likelihood: -478749.718491
EM: Round [197] log likelihood: -478749.718091
EM: Round [198] log likelihood: -478749.717697
EM: Round [199] log likelihood: -478749.717310
EM: Round [200] log likelihood: -478749.716929
EM: Round [201] log likelihood: -478749.716554
EM: Round [202] log likelihood: -478749.716185
EM: Round [203] log likelihood: -478749.715822
EM: Round [204] log likelihood: -478749.715465
EM: Round [205] log likelihood: -478749.715114
EM: Round [206] log likelihood: -478749.714768
EM: Round [207] log likelihood: -478749.714428
EM: Round [208] log likelihood: -478749.714094
EM: Round [209] log likelihood: -478749.713764
EM: Round [210] log likelihood: -478749.713440
EM: Round [211] log likelihood: -478749.713122
EM: Round [212] log likelihood: -478749.712808
EM: Round [213] log likelihood: -478749.712499
EM: Round [214] log likelihood: -478749.712195
EM: Round [215] log likelihood: -478749.711897
EM: Round [216] log likelihood: -478749.711602
EM: Round [217] log likelihood: -478749.711313
EM: Round [218] log likelihood: -478749.711028
EM: Round [219] log likelihood: -478749.710748
EM: Round [220] log likelihood: -478749.710472
EM: Round [221] log likelihood: -478749.710200
EM: Round [222] log likelihood: -478749.709933
EM: Round [223] log likelihood: -478749.709670
EM: Round [224] log likelihood: -478749.709411
EM: Round [225] log likelihood: -478749.709157
EM: Round [226] log likelihood: -478749.708906
EM: Round [227] log likelihood: -478749.708659
EM: Round [228] log likelihood: -478749.708417
EM: Round [229] log likelihood: -478749.708178
EM: Round [230] log likelihood: -478749.707943
EM: Round [231] log likelihood: -478749.707711
EM: Round [232] log likelihood: -478749.707483
EM: Round [233] log likelihood: -478749.707259
EM: Round [234] log likelihood: -478749.707038
EM: Round [235] log likelihood: -478749.706821
EM: Round [236] log likelihood: -478749.706607
EM: Round [237] log likelihood: -478749.706397
EM: Round [238] log likelihood: -478749.706190
EM: Round [239] log likelihood: -478749.705986
EM: Round [240] log likelihood: -478749.705785
EM: Round [241] log likelihood: -478749.705588
EM: Round [242] log likelihood: -478749.705393
EM: Round [243] log likelihood: -478749.705202
EM: Round [244] log likelihood: -478749.705014
EM: Round [245] log likelihood: -478749.704828
EM: Round [246] log likelihood: -478749.704646
EM: Round [247] log likelihood: -478749.704466
EM: Round [248] log likelihood: -478749.704289
EM: Round [249] log likelihood: -478749.704115
EM: Round [250] log likelihood: -478749.703943
EM: Round [251] log likelihood: -478749.703775
EM: Round [252] log likelihood: -478749.703609
EM: Round [253] log likelihood: -478749.703445
EM: Round [254] log likelihood: -478749.703284
EM: Round [255] log likelihood: -478749.703126
EM: Round [256] log likelihood: -478749.702970
EM: Round [257] log likelihood: -478749.702816
EM: Round [258] log likelihood: -478749.702665
EM: Round [259] log likelihood: -478749.702516
EM: Round [260] log likelihood: -478749.702369
EM: Round [261] log likelihood: -478749.702225
EM: Round [262] log likelihood: -478749.702083
EM: Round [263] log likelihood: -478749.701943
EM: Round [264] log likelihood: -478749.701806
EM: Round [265] log likelihood: -478749.701670
EM: Round [266] log likelihood: -478749.701537
EM: Round [267] log likelihood: -478749.701405
EM: Round [268] log likelihood: -478749.701276
EM: Round [269] log likelihood: -478749.701148
EM: Round [270] log likelihood: -478749.701023
EM: Round [271] log likelihood: -478749.700900
EM: Round [272] log likelihood: -478749.700778
EM: Round [273] log likelihood: -478749.700658
EM: Round [274] log likelihood: -478749.700541
EM: Round [275] log likelihood: -478749.700425
EM: Round [276] log likelihood: -478749.700310
EM: Round [277] log likelihood: -478749.700198
EM: Round [278] log likelihood: -478749.700087
EM: Round [279] log likelihood: -478749.699978
EM: Round [280] log likelihood: -478749.699871
EM: Round [281] log likelihood: -478749.699765
EM: Round [282] log likelihood: -478749.699661
EM: Round [283] log likelihood: -478749.699558
EM: Round [284] log likelihood: -478749.699457
EM: Round [285] log likelihood: -478749.699358
EM: Stopping iterations at round 285 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.FdE5odzjaH/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.FdE5odzjaH/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.FdE5odzjaH/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 217243972 > /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.FdE5odzjaH/ctat_genome_lib_build_dir > /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.FdE5odzjaH/ctat_genome_lib_build_dir --annotate /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.FdE5odzjaH/ctat_genome_lib_build_dir
-done, see /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.FdE5odzjaH/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1624, filtered: 11911)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.FdE5odzjaH/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.FdE5odzjaH/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000270562.1]
WARNING, no entry stored in dbm for [ENSG00000226548.1]
WARNING, no entry stored in dbm for [ENSG00000264044.1]
WARNING, no entry stored in dbm for [ENSG00000234690.7]
WARNING, no entry stored in dbm for [ENSG00000248290.1]
WARNING, no entry stored in dbm for [ENSG00000251504.1]
WARNING, no entry stored in dbm for [ENSG00000258451.1]
WARNING, no entry stored in dbm for [ENSG00000271774.1]
WARNING, no entry stored in dbm for [ENSG00000283269.1]
WARNING, no entry stored in dbm for [ENSG00000250346.1]
WARNING, no entry stored in dbm for [ENSG00000268896.1]
WARNING, no entry stored in dbm for [ENSG00000226741.2]
WARNING, no entry stored in dbm for [ENSG00000176124.15]
WARNING, no entry stored in dbm for [ENSG00000235706.8]
WARNING, no entry stored in dbm for [ENSG00000267696.6]
WARNING, no entry stored in dbm for [ENSG00000287839.1]
WARNING, no entry stored in dbm for [ENSG00000254258.1]
WARNING, no entry stored in dbm for [ENSG00000286699.1]
WARNING, no entry stored in dbm for [ENSG00000284294.1]
WARNING, no entry stored in dbm for [ENSG00000214900.11]
WARNING, no entry stored in dbm for [ENSG00000203364.2]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000280649.2]
WARNING, no entry stored in dbm for [ENSG00000237737.6]
WARNING, no entry stored in dbm for [ENSG00000249717.1]
WARNING, no entry stored in dbm for [ENSG00000274333.4]
WARNING, no entry stored in dbm for [ENSG00000278903.3]
WARNING, no entry stored in dbm for [ENSG00000244041.7]
WARNING, no entry stored in dbm for [ENSG00000285957.1]
WARNING, no entry stored in dbm for [ENSG00000265272.2]
WARNING, no entry stored in dbm for [ENSG00000235823.3]
WARNING, no entry stored in dbm for [ENSG00000253438.4]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000242070.1]
WARNING, no entry stored in dbm for [ENSG00000213777.5]
WARNING, no entry stored in dbm for [ENSG00000286803.1]
WARNING, no entry stored in dbm for [ENSG00000276241.1]
WARNING, no entry stored in dbm for [ENSG00000279175.1]
WARNING, no entry stored in dbm for [ENSG00000230547.1]
WARNING, no entry stored in dbm for [ENSG00000230681.1]
WARNING, no entry stored in dbm for [ENSG00000176700.20]
WARNING, no entry stored in dbm for [ENSG00000261798.1]
WARNING, no entry stored in dbm for [ENSG00000287326.1]
WARNING, no entry stored in dbm for [ENSG00000254634.4]
WARNING, no entry stored in dbm for [ENSG00000233098.9]
WARNING, no entry stored in dbm for [ENSG00000154874.15]
WARNING, no entry stored in dbm for [ENSG00000154874.15]
WARNING, no entry stored in dbm for [ENSG00000237859.2]
WARNING, no entry stored in dbm for [ENSG00000213235.3]
WARNING, no entry stored in dbm for [ENSG00000249669.10]
WARNING, no entry stored in dbm for [ENSG00000236739.3]
WARNING, no entry stored in dbm for [ENSG00000228775.8]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000259905.7]
WARNING, no entry stored in dbm for [ENSG00000223770.5]
WARNING, no entry stored in dbm for [ENSG00000257607.1]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [ENSG00000288596.2]
WARNING, no entry stored in dbm for [ENSG00000241411.1]
WARNING, no entry stored in dbm for [ENSG00000203414.2]
WARNING, no entry stored in dbm for [ENSG00000236608.1]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000244398.1]
WARNING, no entry stored in dbm for [ENSG00000241313.3]
WARNING, no entry stored in dbm for [ENSG00000228779.1]
WARNING, no entry stored in dbm for [ENSG00000233343.1]
WARNING, no entry stored in dbm for [ENSG00000226864.2]
WARNING, no entry stored in dbm for [ENSG00000184319.16]
WARNING, no entry stored in dbm for [ENSG00000258203.5]
WARNING, no entry stored in dbm for [ENSG00000235919.4]
WARNING, no entry stored in dbm for [ENSG00000258186.2]
WARNING, no entry stored in dbm for [ENSG00000257386.1]
WARNING, no entry stored in dbm for [ENSG00000224356.5]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000225169.1]
WARNING, no entry stored in dbm for [ENSG00000284809.1]
WARNING, no entry stored in dbm for [ENSG00000228862.4]
WARNING, no entry stored in dbm for [ENSG00000228013.1]
WARNING, no entry stored in dbm for [ENSG00000255108.1]
WARNING, no entry stored in dbm for [ENSG00000279147.1]
WARNING, no entry stored in dbm for [ENSG00000285769.2]
WARNING, no entry stored in dbm for [ENSG00000237654.6]
WARNING, no entry stored in dbm for [ENSG00000224413.1]
WARNING, no entry stored in dbm for [ENSG00000236304.1]
WARNING, no entry stored in dbm for [ENSG00000280432.1]
WARNING, no entry stored in dbm for [ENSG00000256916.1]
WARNING, no entry stored in dbm for [ENSG00000224431.1]
WARNING, no entry stored in dbm for [ENSG00000200097.1]
WARNING, no entry stored in dbm for [ENSG00000235085.3]
WARNING, no entry stored in dbm for [ENSG00000250575.1]
WARNING, no entry stored in dbm for [ENSG00000270094.1]
WARNING, no entry stored in dbm for [ENSG00000284740.1]
WARNING, no entry stored in dbm for [ENSG00000267305.2]
WARNING, no entry stored in dbm for [ENSG00000287356.1]
WARNING, no entry stored in dbm for [ENSG00000279140.1]
WARNING, no entry stored in dbm for [ENSG00000226643.2]
WARNING, no entry stored in dbm for [ENSG00000239593.1]
WARNING, no entry stored in dbm for [ENSG00000228302.2]
WARNING, no entry stored in dbm for [ENSG00000228302.2]
WARNING, no entry stored in dbm for [ENSG00000170161.7]
WARNING, no entry stored in dbm for [ENSG00000231995.2]
WARNING, no entry stored in dbm for [ENSG00000170161.7]
WARNING, no entry stored in dbm for [ENSG00000231212.1]
WARNING, no entry stored in dbm for [ENSG00000240291.1]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000237742.7]
WARNING, no entry stored in dbm for [ENSG00000235582.2]
WARNING, no entry stored in dbm for [ENSG00000215016.2]
WARNING, no entry stored in dbm for [ENSG00000235582.2]
WARNING, no entry stored in dbm for [ENSG00000280285.1]
WARNING, no entry stored in dbm for [ENSG00000286109.1]
WARNING, no entry stored in dbm for [ENSG00000227301.1]
WARNING, no entry stored in dbm for [ENSG00000279096.2]
WARNING, no entry stored in dbm for [ENSG00000273507.5]
WARNING, no entry stored in dbm for [ENSG00000227482.1]
WARNING, no entry stored in dbm for [ENSG00000239665.8]
WARNING, no entry stored in dbm for [ENSG00000285664.2]
WARNING, no entry stored in dbm for [ENSG00000232807.2]
WARNING, no entry stored in dbm for [ENSG00000278784.1]
WARNING, no entry stored in dbm for [ENSG00000217648.1]
WARNING, no entry stored in dbm for [ENSG00000259648.1]
WARNING, no entry stored in dbm for [ENSG00000259515.1]
WARNING, no entry stored in dbm for [ENSG00000259515.1]
WARNING, no entry stored in dbm for [ENSG00000259515.1]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000231113.2]
WARNING, no entry stored in dbm for [ENSG00000236740.6]
WARNING, no entry stored in dbm for [ENSG00000260793.2]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000230092.7]
WARNING, no entry stored in dbm for [ENSG00000254332.1]
WARNING, no entry stored in dbm for [ENSG00000253500.6]
WARNING, no entry stored in dbm for [ENSG00000231713.2]
WARNING, no entry stored in dbm for [ENSG00000248752.3]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000262049.1]
WARNING, no entry stored in dbm for [ENSG00000259833.5]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000264107.1]
WARNING, no entry stored in dbm for [ENSG00000228205.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000265791.1]
WARNING, no entry stored in dbm for [ENSG00000270285.1]
WARNING, no entry stored in dbm for [ENSG00000237729.2]
WARNING, no entry stored in dbm for [ENSG00000253452.6]
WARNING, no entry stored in dbm for [ENSG00000244398.1]
WARNING, no entry stored in dbm for [ENSG00000242123.1]
WARNING, no entry stored in dbm for [ENSG00000286010.1]
WARNING, no entry stored in dbm for [ENSG00000227077.3]
WARNING, no entry stored in dbm for [ENSG00000270265.1]
WARNING, no entry stored in dbm for [ENSG00000279481.1]
WARNING, no entry stored in dbm for [ENSG00000255454.1]
WARNING, no entry stored in dbm for [ENSG00000287176.1]
WARNING, no entry stored in dbm for [ENSG00000228303.1]
WARNING, no entry stored in dbm for [ENSG00000180015.12]
WARNING, no entry stored in dbm for [ENSG00000284634.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000256625.1]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000269148.1]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000268100.1]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000259198.1]
WARNING, no entry stored in dbm for [ENSG00000277837.1]
WARNING, no entry stored in dbm for [ENSG00000167912.6]
WARNING, no entry stored in dbm for [ENSG00000253114.2]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000261879.7]
WARNING, no entry stored in dbm for [ENSG00000285908.1]
WARNING, no entry stored in dbm for [ENSG00000237999.2]
WARNING, no entry stored in dbm for [ENSG00000241889.1]
WARNING, no entry stored in dbm for [ENSG00000254680.1]
WARNING, no entry stored in dbm for [ENSG00000249258.2]
WARNING, no entry stored in dbm for [ENSG00000239985.2]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000272256.1]
WARNING, no entry stored in dbm for [ENSG00000254951.7]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000233382.7]
WARNING, no entry stored in dbm for [ENSG00000229119.3]
WARNING, no entry stored in dbm for [ENSG00000267669.1]
WARNING, no entry stored in dbm for [ENSG00000280381.1]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000215263.2]
WARNING, no entry stored in dbm for [ENSG00000240531.1]
WARNING, no entry stored in dbm for [ENSG00000263766.5]
WARNING, no entry stored in dbm for [ENSG00000261303.6]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000269651.1]
WARNING, no entry stored in dbm for [ENSG00000259407.1]
WARNING, no entry stored in dbm for [ENSG00000272267.2]
WARNING, no entry stored in dbm for [ENSG00000254681.6]
WARNING, no entry stored in dbm for [ENSG00000230551.4]
WARNING, no entry stored in dbm for [ENSG00000234537.1]
WARNING, no entry stored in dbm for [ENSG00000260624.2]
WARNING, no entry stored in dbm for [ENSG00000229677.1]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000261329.6]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000260599.1]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000277369.1]
WARNING, no entry stored in dbm for [ENSG00000250608.2]
WARNING, no entry stored in dbm for [ENSG00000258056.2]
WARNING, no entry stored in dbm for [ENSG00000228335.1]
WARNING, no entry stored in dbm for [ENSG00000280152.1]
WARNING, no entry stored in dbm for [ENSG00000260482.3]
WARNING, no entry stored in dbm for [ENSG00000267815.1]
WARNING, no entry stored in dbm for [ENSG00000268401.2]
WARNING, no entry stored in dbm for [ENSG00000279249.3]
WARNING, no entry stored in dbm for [ENSG00000236886.2]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000260850.2]
WARNING, no entry stored in dbm for [ENSG00000266667.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000287574.1]
WARNING, no entry stored in dbm for [ENSG00000273419.1]
WARNING, no entry stored in dbm for [ENSG00000277283.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.FdE5odzjaH/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)