File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1e/70e0d061c36bfb3cd2af36fe8559bf/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:58:52
                             Started mapping on |	Jun 08 11:05:23
                                    Finished on |	Jun 08 11:48:25
       Mapping speed, Million of reads per hour |	394.24

                          Number of input reads |	282756743
                      Average input read length |	223
                                    UNIQUE READS:
                   Uniquely mapped reads number |	268931789
                        Uniquely mapped reads % |	95.11%
                          Average mapped length |	222.05
                       Number of splices: Total |	217694354
            Number of splices: Annotated (sjdb) |	214209514
                       Number of splices: GT/AG |	215132156
                       Number of splices: GC/AG |	1426015
                       Number of splices: AT/AC |	147450
               Number of splices: Non-canonical |	988733
                      Mismatch rate per base, % |	0.30%
                         Deletion rate per base |	0.02%
                        Deletion average length |	2.02
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.68
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	9250114
             % of reads mapped to multiple loci |	3.27%
        Number of reads mapped to too many loci |	636606
             % of reads mapped to too many loci |	0.23%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	3442977
                 % of reads unmapped: too short |	1.22%
                Number of reads unmapped: other |	495257
                     % of reads unmapped: other |	0.18%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%