.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (1173_K3O_T1_RNA_SLD_01_A23T55JLT4_1)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6a/330d258e053a308c06296a7c897c99/.command.err
Size: 21.3 KB
Task: NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (1173_K3O_T1_RNA_SLD_01_A23T55JLT4_1)
Attempt
Content

-ctat genome lib [/tmp/nxf.pciJobuA9H/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.pciJobuA9H/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.pciJobuA9H/./star-fusion.preliminary
-sample contains 14194533 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.pciJobuA9H/ctat_genome_lib_build_dir  -J /tmp/nxf.pciJobuA9H/1173_K3O_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  -O /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.pciJobuA9H/1173_K3O_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.pciJobuA9H/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=60000.00/min 
[20000], rate=48000.00/min 
[30000], rate=43902.44/min 
[40000], rate=44444.44/min 
[50000], rate=46875.00/min 
[60000], rate=49315.07/min 
[70000], rate=51219.51/min 
[80000], rate=53333.33/min 
[90000], rate=55670.10/min 
[100000], rate=57692.31/min 
[110000], rate=58407.08/min 
[120000], rate=57600.00/min 
[130000], rate=55714.29/min 
[140000], rate=54901.96/min 
[150000], rate=55900.62/min -building interval tree based on /tmp/nxf.pciJobuA9H/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=54545.45/min 
[20000], rate=48000.00/min 
[30000], rate=52941.18/min 
[40000], rate=52173.91/min 
[50000], rate=50000.00/min 
[60000], rate=50704.23/min 
[70000], rate=49411.76/min 
[80000], rate=50000.00/min 
[90000], rate=51428.57/min 
[100000], rate=51282.05/min 
[110000], rate=51162.79/min 
[120000], rate=51428.57/min 
[130000], rate=51655.63/min 
[140000], rate=52173.91/min 
[150000], rate=52631.58/min -building interval tree based on /tmp/nxf.pciJobuA9H/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=60000.00/min 
[20000], rate=60000.00/min 
[30000], rate=56250.00/min 
[40000], rate=51063.83/min 
[50000], rate=50000.00/min 
[60000], rate=47368.42/min 
[70000], rate=47191.01/min 
[80000], rate=47058.82/min 
[90000], rate=47368.42/min 
[100000], rate=46875.00/min 
[110000], rate=46478.87/min 
[120000], rate=46753.25/min 
[130000], rate=48148.15/min 
[140000], rate=48275.86/min 
[150000], rate=47368.42/min -building interval tree based on /tmp/nxf.pciJobuA9H/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=85714.29/min 
[20000], rate=75000.00/min 
[30000], rate=72000.00/min 
[40000], rate=42105.26/min 
[50000], rate=37500.00/min 
[60000], rate=37113.40/min 
[70000], rate=37837.84/min 
[80000], rate=39344.26/min 
[90000], rate=40601.50/min 
[100000], rate=41666.67/min 
[110000], rate=41509.43/min 
[120000], rate=41860.47/min 
[130000], rate=42622.95/min 
[140000], rate=42639.59/min 
[150000], rate=42654.03/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.pciJobuA9H/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 3000000.00 reads per min processed...  
 2400000.00 reads per min processed...  
 2571428.57 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.pciJobuA9H/1173_K3O_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.pciJobuA9H/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -73904.290548
EM: Round [1] log likelihood: -73893.520518
EM: Round [2] log likelihood: -73888.821094
EM: Round [3] log likelihood: -73886.361431
EM: Round [4] log likelihood: -73884.995694
EM: Round [5] log likelihood: -73884.223606
EM: Round [6] log likelihood: -73883.781834
EM: Round [7] log likelihood: -73883.524979
EM: Round [8] log likelihood: -73883.372566
EM: Round [9] log likelihood: -73883.280053
EM: Round [10] log likelihood: -73883.222599
EM: Round [11] log likelihood: -73883.186140
EM: Round [12] log likelihood: -73883.162552
EM: Round [13] log likelihood: -73883.147034
EM: Round [14] log likelihood: -73883.136681
EM: Round [15] log likelihood: -73883.129692
EM: Round [16] log likelihood: -73883.124929
EM: Round [17] log likelihood: -73883.121656
EM: Round [18] log likelihood: -73883.119393
EM: Round [19] log likelihood: -73883.117819
EM: Round [20] log likelihood: -73883.116719
EM: Round [21] log likelihood: -73883.115948
EM: Round [22] log likelihood: -73883.115404
EM: Round [23] log likelihood: -73883.115020
EM: Round [24] log likelihood: -73883.114748
EM: Round [25] log likelihood: -73883.114554
EM: Round [26] log likelihood: -73883.114416
EM: Round [27] log likelihood: -73883.114317
EM: Stopping iterations at round 27 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -73901.856311
EM: Round [1] log likelihood: -73892.361726
EM: Round [2] log likelihood: -73888.229232
EM: Round [3] log likelihood: -73886.046664
EM: Round [4] log likelihood: -73884.824100
EM: Round [5] log likelihood: -73884.128299
EM: Round [6] log likelihood: -73883.728027
EM: Round [7] log likelihood: -73883.494136
EM: Round [8] log likelihood: -73883.354628
EM: Round [9] log likelihood: -73883.269475
EM: Round [10] log likelihood: -73883.216279
EM: Round [11] log likelihood: -73883.182318
EM: Round [12] log likelihood: -73883.160214
EM: Round [13] log likelihood: -73883.145590
EM: Round [14] log likelihood: -73883.135780
EM: Round [15] log likelihood: -73883.129125
EM: Round [16] log likelihood: -73883.124570
EM: Round [17] log likelihood: -73883.121427
EM: Round [18] log likelihood: -73883.119246
EM: Round [19] log likelihood: -73883.117724
EM: Round [20] log likelihood: -73883.116658
EM: Round [21] log likelihood: -73883.115908
EM: Round [22] log likelihood: -73883.115378
EM: Round [23] log likelihood: -73883.115003
EM: Round [24] log likelihood: -73883.114737
EM: Round [25] log likelihood: -73883.114547
EM: Round [26] log likelihood: -73883.114411
EM: Round [27] log likelihood: -73883.114314
EM: Stopping iterations at round 27 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.pciJobuA9H/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.pciJobuA9H/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.pciJobuA9H/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 14194533 > /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.pciJobuA9H/ctat_genome_lib_build_dir > /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.pciJobuA9H/ctat_genome_lib_build_dir --annotate /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.pciJobuA9H/ctat_genome_lib_build_dir
-done, see /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.pciJobuA9H/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 567, filtered: 5313)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.pciJobuA9H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.pciJobuA9H/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000181126.13]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000281103.2]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000257074.3]
WARNING, no entry stored in dbm for [ENSG00000241030.1]
WARNING, no entry stored in dbm for [ENSG00000258130.8]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000255621.1]
WARNING, no entry stored in dbm for [ENSG00000264169.2]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000269352.1]
WARNING, no entry stored in dbm for [ENSG00000274295.1]
WARNING, no entry stored in dbm for [ENSG00000184441.4]
WARNING, no entry stored in dbm for [ENSG00000241560.7]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000272848.2]
WARNING, no entry stored in dbm for [ENSG00000285961.1]
WARNING, no entry stored in dbm for [ENSG00000259768.6]
WARNING, no entry stored in dbm for [ENSG00000234624.2]
WARNING, no entry stored in dbm for [ENSG00000228679.1]
WARNING, no entry stored in dbm for [ENSG00000170919.16]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000214559.3]
WARNING, no entry stored in dbm for [ENSG00000249635.1]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000269139.2]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000222635.1]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000230629.2]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000229500.1]
WARNING, no entry stored in dbm for [ENSG00000269609.6]
WARNING, no entry stored in dbm for [ENSG00000222774.1]
WARNING, no entry stored in dbm for [ENSG00000237838.1]
WARNING, no entry stored in dbm for [ENSG00000229419.1]
WARNING, no entry stored in dbm for [ENSG00000235777.1]
WARNING, no entry stored in dbm for [ENSG00000257769.1]
WARNING, no entry stored in dbm for [ENSG00000255857.6]
WARNING, no entry stored in dbm for [ENSG00000273420.1]
WARNING, no entry stored in dbm for [ENSG00000248699.1]
WARNING, no entry stored in dbm for [ENSG00000250980.1]
WARNING, no entry stored in dbm for [ENSG00000279214.1]
WARNING, no entry stored in dbm for [ENSG00000227195.11]
WARNING, no entry stored in dbm for [ENSG00000250251.6]
WARNING, no entry stored in dbm for [ENSG00000277599.1]
WARNING, no entry stored in dbm for [ENSG00000274111.1]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000196756.13]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000231806.3]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000205578.6]
WARNING, no entry stored in dbm for [ENSG00000231548.2]
WARNING, no entry stored in dbm for [ENSG00000277661.4]
WARNING, no entry stored in dbm for [ENSG00000223705.9]
WARNING, no entry stored in dbm for [ENSG00000247809.9]
WARNING, no entry stored in dbm for [ENSG00000239880.1]
WARNING, no entry stored in dbm for [ENSG00000240606.3]
WARNING, no entry stored in dbm for [ENSG00000243911.3]
WARNING, no entry stored in dbm for [ENSG00000286710.1]
WARNING, no entry stored in dbm for [ENSG00000198727.2]
WARNING, no entry stored in dbm for [ENSG00000257084.1]
WARNING, no entry stored in dbm for [ENSG00000221190.1]
WARNING, no entry stored in dbm for [ENSG00000258140.2]
WARNING, no entry stored in dbm for [ENSG00000266504.1]
WARNING, no entry stored in dbm for [ENSG00000254427.2]
WARNING, no entry stored in dbm for [ENSG00000234864.2]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000245060.8]
WARNING, no entry stored in dbm for [ENSG00000243831.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000286502.1]
WARNING, no entry stored in dbm for [ENSG00000286489.1]
WARNING, no entry stored in dbm for [ENSG00000259917.1]
WARNING, no entry stored in dbm for [ENSG00000283544.1]
WARNING, no entry stored in dbm for [ENSG00000270255.1]
WARNING, no entry stored in dbm for [ENSG00000248890.2]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000261856.1]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000232200.2]
WARNING, no entry stored in dbm for [ENSG00000272645.3]
WARNING, no entry stored in dbm for [ENSG00000199949.2]
WARNING, no entry stored in dbm for [ENSG00000222997.1]
WARNING, no entry stored in dbm for [ENSG00000252316.1]
WARNING, no entry stored in dbm for [ENSG00000267482.1]
WARNING, no entry stored in dbm for [ENSG00000229608.1]
WARNING, no entry stored in dbm for [ENSG00000225264.3]
WARNING, no entry stored in dbm for [ENSG00000234996.4]
WARNING, no entry stored in dbm for [ENSG00000232022.7]
WARNING, no entry stored in dbm for [ENSG00000245685.7]
WARNING, no entry stored in dbm for [ENSG00000278733.1]
WARNING, no entry stored in dbm for [ENSG00000271795.1]
WARNING, no entry stored in dbm for [ENSG00000212170.1]
WARNING, no entry stored in dbm for [ENSG00000270111.3]
WARNING, no entry stored in dbm for [ENSG00000272734.1]
WARNING, no entry stored in dbm for [ENSG00000235643.2]
WARNING, no entry stored in dbm for [ENSG00000182397.14]
WARNING, no entry stored in dbm for [ENSG00000278733.1]
WARNING, no entry stored in dbm for [ENSG00000269934.3]
WARNING, no entry stored in dbm for [ENSG00000203709.12]
WARNING, no entry stored in dbm for [ENSG00000246695.8]
WARNING, no entry stored in dbm for [ENSG00000236360.2]
WARNING, no entry stored in dbm for [ENSG00000213269.2]
WARNING, no entry stored in dbm for [ENSG00000235583.2]
WARNING, no entry stored in dbm for [ENSG00000255031.5]
WARNING, no entry stored in dbm for [ENSG00000217120.1]
WARNING, no entry stored in dbm for [ENSG00000278156.2]
WARNING, no entry stored in dbm for [ENSG00000263325.1]
WARNING, no entry stored in dbm for [ENSG00000182397.14]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000221845.4]
WARNING, no entry stored in dbm for [ENSG00000253554.7]
WARNING, no entry stored in dbm for [ENSG00000223062.1]
WARNING, no entry stored in dbm for [ENSG00000224186.8]
WARNING, no entry stored in dbm for [ENSG00000272888.7]
WARNING, no entry stored in dbm for [ENSG00000223467.2]
WARNING, no entry stored in dbm for [ENSG00000284977.2]
WARNING, no entry stored in dbm for [ENSG00000261190.5]
WARNING, no entry stored in dbm for [ENSG00000175746.6]
WARNING, no entry stored in dbm for [ENSG00000282925.1]
WARNING, no entry stored in dbm for [ENSG00000234996.4]
WARNING, no entry stored in dbm for [ENSG00000271699.5]
WARNING, no entry stored in dbm for [ENSG00000273599.1]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000204959.4]
WARNING, no entry stored in dbm for [ENSG00000254648.1]
WARNING, no entry stored in dbm for [ENSG00000248409.2]
WARNING, no entry stored in dbm for [ENSG00000270402.1]
WARNING, no entry stored in dbm for [ENSG00000243302.3]
WARNING, no entry stored in dbm for [ENSG00000287700.1]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000285935.1]
WARNING, no entry stored in dbm for [ENSG00000258414.1]
WARNING, no entry stored in dbm for [ENSG00000258414.1]
WARNING, no entry stored in dbm for [ENSG00000286482.1]
WARNING, no entry stored in dbm for [ENSG00000259515.1]
WARNING, no entry stored in dbm for [ENSG00000259515.1]
WARNING, no entry stored in dbm for [ENSG00000215244.3]
WARNING, no entry stored in dbm for [ENSG00000198727.2]
WARNING, no entry stored in dbm for [ENSG00000253187.2]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000285668.1]
WARNING, no entry stored in dbm for [ENSG00000254231.3]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000284610.1]
WARNING, no entry stored in dbm for [ENSG00000243176.6]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000259299.1]
WARNING, no entry stored in dbm for [ENSG00000270240.2]
WARNING, no entry stored in dbm for [ENSG00000257453.1]
WARNING, no entry stored in dbm for [ENSG00000272702.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000261786.1]
WARNING, no entry stored in dbm for [ENSG00000203865.11]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000248015.7]


	* STAR-Fusion complete.  See output: /tmp/nxf.pciJobuA9H/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)