Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/24bedd9cec1196ca3f879e390b96bf/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/6834dab8b1c36649eadcf04ed5c10f/1173_JLC_T1_RNA_SLD_01_A23T55JLT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/21/811ee558255d453bf8892ea1692ad8/1173_JLC_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/24bedd9cec1196ca3f879e390b96bf/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/6834dab8b1c36649eadcf04ed5c10f/1173_JLC_T1_RNA_SLD_01_A23T55JLT4_1_2.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.HCjJX4hR00/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.HCjJX4hR00/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary
-sample contains 294892385 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.HCjJX4hR00/ctat_genome_lib_build_dir  -J /tmp/nxf.HCjJX4hR00/1173_JLC_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  -O /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.HCjJX4hR00/1173_JLC_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.HCjJX4hR00/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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-building interval tree based on /tmp/nxf.HCjJX4hR00/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2710000], rate=50154.23/min 
-building interval tree based on /tmp/nxf.HCjJX4hR00/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=31578.95/min 
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[3420000], rate=51300.00/min 
[3430000], rate=51360.12/min -building interval tree based on /tmp/nxf.HCjJX4hR00/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=75000.00/min 
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[2690[2720000], rate=48906.20/min 
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[3400000], rate=39882.70/min 
[3410000], rate=39921.95/min 
[3420000], rate=39953.27/min 
[3430000], rate=39992.23/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.HCjJX4hR00/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
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done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.HCjJX4hR00/1173_JLC_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.HCjJX4hR00/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -6052051.775154
EM: Round [1] log likelihood: -6051371.074340
EM: Round [2] log likelihood: -6051154.629870
EM: Round [3] log likelihood: -6051057.371103
EM: Round [4] log likelihood: -6051005.553067
EM: Round [5] log likelihood: -6050975.092817
EM: Round [6] log likelihood: -6050955.866866
EM: Round [7] log likelihood: -6050942.992369
EM: Round [8] log likelihood: -6050933.925177
EM: Round [9] log likelihood: -6050927.262862
EM: Round [10] log likelihood: -6050922.192672
EM: Round [11] log likelihood: -6050918.220972
EM: Round [12] log likelihood: -6050915.034630
EM: Round [13] log likelihood: -6050912.427036
EM: Round [14] log likelihood: -6050910.257015
EM: Round [15] log likelihood: -6050908.425112
EM: Round [16] log likelihood: -6050906.859389
EM: Round [17] log likelihood: -6050905.506616
EM: Round [18] log likelihood: -6050904.326623
EM: Round [19] log likelihood: -6050903.288577
EM: Round [20] log likelihood: -6050902.368459
EM: Round [21] log likelihood: -6050901.547304
EM: Round [22] log likelihood: -6050900.809963
EM: Round [23] log likelihood: -6050900.144201
EM: Round [24] log likelihood: -6050899.540044
EM: Round [25] log likelihood: -6050898.989279
EM: Round [26] log likelihood: -6050898.485095
EM: Round [27] log likelihood: -6050898.021791
EM: Round [28] log likelihood: -6050897.594567
EM: Round [29] log likelihood: -6050897.199348
EM: Round [30] log likelihood: -6050896.832659
EM: Round [31] log likelihood: -6050896.491511
EM: Round [32] log likelihood: -6050896.173328
EM: Round [33] log likelihood: -6050895.875869
EM: Round [34] log likelihood: -6050895.597181
EM: Round [35] log likelihood: -6050895.335554
EM: Round [36] log likelihood: -6050895.089480
EM: Round [37] log likelihood: -6050894.857628
EM: Round [38] log likelihood: -6050894.638818
EM: Round [39] log likelihood: -6050894.431997
EM: Round [40] log likelihood: -6050894.236227
EM: Round [41] log likelihood: -6050894.050665
EM: Round [42] log likelihood: -6050893.874555
EM: Round [43] log likelihood: -6050893.707214
EM: Round [44] log likelihood: -6050893.548026
EM: Round [45] log likelihood: -6050893.396430
EM: Round [46] log likelihood: -6050893.251920
EM: Round [47] log likelihood: -6050893.114031
EM: Round [48] log likelihood: -6050892.982341
EM: Round [49] log likelihood: -6050892.856464
EM: Round [50] log likelihood: -6050892.736044
EM: Round [51] log likelihood: -6050892.620756
EM: Round [52] log likelihood: -6050892.510299
EM: Round [53] log likelihood: -6050892.404397
EM: Round [54] log likelihood: -6050892.302795
EM: Round [55] log likelihood: -6050892.205255
EM: Round [56] log likelihood: -6050892.111558
EM: Round [57] log likelihood: -6050892.021500
EM: Round [58] log likelihood: -6050891.934892
EM: Round [59] log likelihood: -6050891.851558
EM: Round [60] log likelihood: -6050891.771332
EM: Round [61] log likelihood: -6050891.694061
EM: Round [62] log likelihood: -6050891.619602
EM: Round [63] log likelihood: -6050891.547819
EM: Round [64] log likelihood: -6050891.478587
EM: Round [65] log likelihood: -6050891.411787
EM: Round [66] log likelihood: -6050891.347307
EM: Round [67] log likelihood: -6050891.285044
EM: Round [68] log likelihood: -6050891.224898
EM: Round [69] log likelihood: -6050891.166776
EM: Round [70] log likelihood: -6050891.110591
EM: Round [71] log likelihood: -6050891.056261
EM: Round [72] log likelihood: -6050891.003706
EM: Round [73] log likelihood: -6050890.952853
EM: Round [74] log likelihood: -6050890.903631
EM: Round [75] log likelihood: -6050890.855974
EM: Round [76] log likelihood: -6050890.809820
EM: Round [77] log likelihood: -6050890.765108
EM: Round [78] log likelihood: -6050890.721781
EM: Round [79] log likelihood: -6050890.679786
EM: Round [80] log likelihood: -6050890.639070
EM: Round [81] log likelihood: -6050890.599586
EM: Round [82] log likelihood: -6050890.561287
EM: Round [83] log likelihood: -6050890.524128
EM: Round [84] log likelihood: -6050890.488067
EM: Round [85] log likelihood: -6050890.453064
EM: Round [86] log likelihood: -6050890.419079
EM: Round [87] log likelihood: -6050890.386077
EM: Round [88] log likelihood: -6050890.354023
EM: Round [89] log likelihood: -6050890.322881
EM: Round [90] log likelihood: -6050890.292622
EM: Round [91] log likelihood: -6050890.263212
EM: Round [92] log likelihood: -6050890.234624
EM: Round [93] log likelihood: -6050890.206829
EM: Round [94] log likelihood: -6050890.179800
EM: Round [95] log likelihood: -6050890.153511
EM: Round [96] log likelihood: -6050890.127936
EM: Round [97] log likelihood: -6050890.103054
EM: Round [98] log likelihood: -6050890.078839
EM: Round [99] log likelihood: -6050890.055271
EM: Round [100] log likelihood: -6050890.032328
EM: Round [101] log likelihood: -6050890.009991
EM: Round [102] log likelihood: -6050889.988238
EM: Round [103] log likelihood: -6050889.967053
EM: Round [104] log likelihood: -6050889.946416
EM: Round [105] log likelihood: -6050889.926311
EM: Round [106] log likelihood: -6050889.906720
EM: Round [107] log likelihood: -6050889.887629
EM: Round [108] log likelihood: -6050889.869020
EM: Round [109] log likelihood: -6050889.850880
EM: Round [110] log likelihood: -6050889.833193
EM: Round [111] log likelihood: -6050889.815947
EM: Round [112] log likelihood: -6050889.799127
EM: Round [113] log likelihood: -6050889.782722
EM: Round [114] log likelihood: -6050889.766718
EM: Round [115] log likelihood: -6050889.751103
EM: Round [116] log likelihood: -6050889.735867
EM: Round [117] log likelihood: -6050889.720997
EM: Round [118] log likelihood: -6050889.706484
EM: Round [119] log likelihood: -6050889.692316
EM: Round [120] log likelihood: -6050889.678484
EM: Round [121] log likelihood: -6050889.664978
EM: Round [122] log likelihood: -6050889.651789
EM: Round [123] log likelihood: -6050889.638908
EM: Round [124] log likelihood: -6050889.626325
EM: Round [125] log likelihood: -6050889.614033
EM: Round [126] log likelihood: -6050889.602023
EM: Round [127] log likelihood: -6050889.590287
EM: Round [128] log likelihood: -6050889.578819
EM: Round [129] log likelihood: -6050889.567609
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EM: Round [131] log likelihood: -6050889.545940
EM: Round [132] log likelihood: -6050889.535467
EM: Round [133] log likelihood: -6050889.525225
EM: Round [134] log likelihood: -6050889.515210
EM: Round [135] log likelihood: -6050889.505414
EM: Round [136] log likelihood: -6050889.495832
EM: Round [137] log likelihood: -6050889.486458
EM: Round [138] log likelihood: -6050889.477287
EM: Round [139] log likelihood: -6050889.468313
EM: Round [140] log likelihood: -6050889.459531
EM: Round [141] log likelihood: -6050889.450936
EM: Round [142] log likelihood: -6050889.442523
EM: Round [143] log likelihood: -6050889.434288
EM: Round [144] log likelihood: -6050889.426225
EM: Round [145] log likelihood: -6050889.418331
EM: Round [146] log likelihood: -6050889.410601
EM: Round [147] log likelihood: -6050889.403030
EM: Round [148] log likelihood: -6050889.395616
EM: Round [149] log likelihood: -6050889.388353
EM: Round [150] log likelihood: -6050889.381238
EM: Round [151] log likelihood: -6050889.374267
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EM: Round [153] log likelihood: -6050889.360744
EM: Round [154] log likelihood: -6050889.354185
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EM: Round [156] log likelihood: -6050889.341456
EM: Round [157] log likelihood: -6050889.335278
EM: Round [158] log likelihood: -6050889.329222
EM: Round [159] log likelihood: -6050889.323285
EM: Round [160] log likelihood: -6050889.317462
EM: Round [161] log likelihood: -6050889.311752
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EM: Round [163] log likelihood: -6050889.300659
EM: Round [164] log likelihood: -6050889.295271
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EM: Round [166] log likelihood: -6050889.284798
EM: Round [167] log likelihood: -6050889.279709
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EM: Round [169] log likelihood: -6050889.269815
EM: Round [170] log likelihood: -6050889.265005
EM: Round [171] log likelihood: -6050889.260283
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EM: Round [174] log likelihood: -6050889.246631
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EM: Round [176] log likelihood: -6050889.237937
EM: Round [177] log likelihood: -6050889.233706
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EM: Round [180] log likelihood: -6050889.221461
EM: Round [181] log likelihood: -6050889.217523
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EM: Round [186] log likelihood: -6050889.198835
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EM: Round [188] log likelihood: -6050889.191802
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EM: Round [196] log likelihood: -6050889.165937
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EM: Round [198] log likelihood: -6050889.159990
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EM: Round [201] log likelihood: -6050889.151427
EM: Round [202] log likelihood: -6050889.148663
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EM: Round [208] log likelihood: -6050889.132975
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EM: Round [211] log likelihood: -6050889.125667
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EM: Round [214] log likelihood: -6050889.118689
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EM: Round [216] log likelihood: -6050889.114211
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EM: Round [219] log likelihood: -6050889.107741
EM: Round [220] log likelihood: -6050889.105648
EM: Round [221] log likelihood: -6050889.103586
EM: Round [222] log likelihood: -6050889.101554
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EM: Round [225] log likelihood: -6050889.095632
EM: Round [226] log likelihood: -6050889.093715
EM: Round [227] log likelihood: -6050889.091825
EM: Round [228] log likelihood: -6050889.089962
EM: Round [229] log likelihood: -6050889.088126
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EM: Round [231] log likelihood: -6050889.084530
EM: Round [232] log likelihood: -6050889.082770
EM: Round [233] log likelihood: -6050889.081035
EM: Round [234] log likelihood: -6050889.079323
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EM: Round [237] log likelihood: -6050889.074329
EM: Round [238] log likelihood: -6050889.072710
EM: Round [239] log likelihood: -6050889.071112
EM: Round [240] log likelihood: -6050889.069537
EM: Round [241] log likelihood: -6050889.067982
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EM: Round [243] log likelihood: -6050889.064935
EM: Round [244] log likelihood: -6050889.063442
EM: Round [245] log likelihood: -6050889.061969
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EM: Round [249] log likelihood: -6050889.056267
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EM: Round [255] log likelihood: -6050889.048253
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EM: Round [257] log likelihood: -6050889.045716
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EM: Round [260] log likelihood: -6050889.042028
EM: Round [261] log likelihood: -6050889.040829
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EM: Round [267] log likelihood: -6050889.033940
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EM: Round [271] log likelihood: -6050889.029619
EM: Round [272] log likelihood: -6050889.028571
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EM: Round [280] log likelihood: -6050889.020616
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EM: Round [284] log likelihood: -6050889.016908
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EM: Round [541] log likelihood: -6050888.928989
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EM: Round [555] log likelihood: -6050888.927523
EM: Round [556] log likelihood: -6050888.927423
EM: Stopping iterations at round 556 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -6046551.264409
EM: Round [1] log likelihood: -6046078.774794
EM: Round [2] log likelihood: -6045928.848391
EM: Round [3] log likelihood: -6045862.798792
EM: Round [4] log likelihood: -6045828.867956
EM: Round [5] log likelihood: -6045809.723984
EM: Round [6] log likelihood: -6045798.133379
EM: Round [7] log likelihood: -6045790.686123
EM: Round [8] log likelihood: -6045785.649849
EM: Round [9] log likelihood: -6045782.092891
EM: Round [10] log likelihood: -6045779.487819
EM: Round [11] log likelihood: -6045777.521274
EM: Round [12] log likelihood: -6045775.998580
EM: Round [13] log likelihood: -6045774.793849
EM: Round [14] log likelihood: -6045773.822773
EM: Round [15] log likelihood: -6045773.027163
EM: Round [16] log likelihood: -6045772.365819
EM: Round [17] log likelihood: -6045771.808920
EM: Round [18] log likelihood: -6045771.334479
EM: Round [19] log likelihood: -6045770.926012
EM: Round [20] log likelihood: -6045770.570985
EM: Round [21] log likelihood: -6045770.259738
EM: Round [22] log likelihood: -6045769.984739
EM: Round [23] log likelihood: -6045769.740050
EM: Round [24] log likelihood: -6045769.520937
EM: Round [25] log likelihood: -6045769.323590
EM: Round [26] log likelihood: -6045769.144916
EM: Round [27] log likelihood: -6045768.982378
EM: Round [28] log likelihood: -6045768.833880
EM: Round [29] log likelihood: -6045768.697675
EM: Round [30] log likelihood: -6045768.572298
EM: Round [31] log likelihood: -6045768.456508
EM: Round [32] log likelihood: -6045768.349251
EM: Round [33] log likelihood: -6045768.249623
EM: Round [34] log likelihood: -6045768.156847
EM: Round [35] log likelihood: -6045768.070247
EM: Round [36] log likelihood: -6045767.989236
EM: Round [37] log likelihood: -6045767.913303
EM: Round [38] log likelihood: -6045767.841995
EM: Round [39] log likelihood: -6045767.774914
EM: Round [40] log likelihood: -6045767.711708
EM: Round [41] log likelihood: -6045767.652063
EM: Round [42] log likelihood: -6045767.595699
EM: Round [43] log likelihood: -6045767.542367
EM: Round [44] log likelihood: -6045767.491840
EM: Round [45] log likelihood: -6045767.443918
EM: Round [46] log likelihood: -6045767.398415
EM: Round [47] log likelihood: -6045767.355168
EM: Round [48] log likelihood: -6045767.314025
EM: Round [49] log likelihood: -6045767.274849
EM: Round [50] log likelihood: -6045767.237516
EM: Round [51] log likelihood: -6045767.201910
EM: Round [52] log likelihood: -6045767.167928
EM: Round [53] log likelihood: -6045767.135473
EM: Round [54] log likelihood: -6045767.104456
EM: Round [55] log likelihood: -6045767.074795
EM: Round [56] log likelihood: -6045767.046415
EM: Round [57] log likelihood: -6045767.019247
EM: Round [58] log likelihood: -6045766.993224
EM: Round [59] log likelihood: -6045766.968287
EM: Round [60] log likelihood: -6045766.944380
EM: Round [61] log likelihood: -6045766.921450
EM: Round [62] log likelihood: -6045766.899449
EM: Round [63] log likelihood: -6045766.878331
EM: Round [64] log likelihood: -6045766.858052
EM: Round [65] log likelihood: -6045766.838574
EM: Round [66] log likelihood: -6045766.819858
EM: Round [67] log likelihood: -6045766.801869
EM: Round [68] log likelihood: -6045766.784574
EM: Round [69] log likelihood: -6045766.767941
EM: Round [70] log likelihood: -6045766.751941
EM: Round [71] log likelihood: -6045766.736545
EM: Round [72] log likelihood: -6045766.721728
EM: Round [73] log likelihood: -6045766.707464
EM: Round [74] log likelihood: -6045766.693729
EM: Round [75] log likelihood: -6045766.680501
EM: Round [76] log likelihood: -6045766.667760
EM: Round [77] log likelihood: -6045766.655483
EM: Round [78] log likelihood: -6045766.643653
EM: Round [79] log likelihood: -6045766.632251
EM: Round [80] log likelihood: -6045766.621260
EM: Round [81] log likelihood: -6045766.610662
EM: Round [82] log likelihood: -6045766.600443
EM: Round [83] log likelihood: -6045766.590587
EM: Round [84] log likelihood: -6045766.581079
EM: Round [85] log likelihood: -6045766.571907
EM: Round [86] log likelihood: -6045766.563057
EM: Round [87] log likelihood: -6045766.554517
EM: Round [88] log likelihood: -6045766.546274
EM: Round [89] log likelihood: -6045766.538317
EM: Round [90] log likelihood: -6045766.530636
EM: Round [91] log likelihood: -6045766.523219
EM: Round [92] log likelihood: -6045766.516057
EM: Round [93] log likelihood: -6045766.509141
EM: Round [94] log likelihood: -6045766.502460
EM: Round [95] log likelihood: -6045766.496007
EM: Round [96] log likelihood: -6045766.489772
EM: Round [97] log likelihood: -6045766.483749
EM: Round [98] log likelihood: -6045766.477928
EM: Round [99] log likelihood: -6045766.472303
EM: Round [100] log likelihood: -6045766.466866
EM: Round [101] log likelihood: -6045766.461610
EM: Round [102] log likelihood: -6045766.456530
EM: Round [103] log likelihood: -6045766.451618
EM: Round [104] log likelihood: -6045766.446869
EM: Round [105] log likelihood: -6045766.442277
EM: Round [106] log likelihood: -6045766.437835
EM: Round [107] log likelihood: -6045766.433540
EM: Round [108] log likelihood: -6045766.429385
EM: Round [109] log likelihood: -6045766.425366
EM: Round [110] log likelihood: -6045766.421477
EM: Round [111] log likelihood: -6045766.417715
EM: Round [112] log likelihood: -6045766.414074
EM: Round [113] log likelihood: -6045766.410551
EM: Round [114] log likelihood: -6045766.407141
EM: Round [115] log likelihood: -6045766.403841
EM: Round [116] log likelihood: -6045766.400646
EM: Round [117] log likelihood: -6045766.397554
EM: Round [118] log likelihood: -6045766.394560
EM: Round [119] log likelihood: -6045766.391660
EM: Round [120] log likelihood: -6045766.388853
EM: Round [121] log likelihood: -6045766.386135
EM: Round [122] log likelihood: -6045766.383502
EM: Round [123] log likelihood: -6045766.380952
EM: Round [124] log likelihood: -6045766.378481
EM: Round [125] log likelihood: -6045766.376088
EM: Round [126] log likelihood: -6045766.373770
EM: Round [127] log likelihood: -6045766.371523
EM: Round [128] log likelihood: -6045766.369347
EM: Round [129] log likelihood: -6045766.367237
EM: Round [130] log likelihood: -6045766.365193
EM: Round [131] log likelihood: -6045766.363211
EM: Round [132] log likelihood: -6045766.361291
EM: Round [133] log likelihood: -6045766.359429
EM: Round [134] log likelihood: -6045766.357624
EM: Round [135] log likelihood: -6045766.355873
EM: Round [136] log likelihood: -6045766.354176
EM: Round [137] log likelihood: -6045766.352530
EM: Round [138] log likelihood: -6045766.350934
EM: Round [139] log likelihood: -6045766.349386
EM: Round [140] log likelihood: -6045766.347885
EM: Round [141] log likelihood: -6045766.346428
EM: Round [142] log likelihood: -6045766.345015
EM: Round [143] log likelihood: -6045766.343644
EM: Round [144] log likelihood: -6045766.342313
EM: Round [145] log likelihood: -6045766.341022
EM: Round [146] log likelihood: -6045766.339769
EM: Round [147] log likelihood: -6045766.338553
EM: Round [148] log likelihood: -6045766.337373
EM: Round [149] log likelihood: -6045766.336227
EM: Round [150] log likelihood: -6045766.335115
EM: Round [151] log likelihood: -6045766.334035
EM: Round [152] log likelihood: -6045766.332986
EM: Round [153] log likelihood: -6045766.331968
EM: Round [154] log likelihood: -6045766.330979
EM: Round [155] log likelihood: -6045766.330019
EM: Round [156] log likelihood: -6045766.329086
EM: Round [157] log likelihood: -6045766.328180
EM: Round [158] log likelihood: -6045766.327299
EM: Round [159] log likelihood: -6045766.326444
EM: Round [160] log likelihood: -6045766.325613
EM: Round [161] log likelihood: -6045766.324806
EM: Round [162] log likelihood: -6045766.324021
EM: Round [163] log likelihood: -6045766.323258
EM: Round [164] log likelihood: -6045766.322517
EM: Round [165] log likelihood: -6045766.321796
EM: Round [166] log likelihood: -6045766.321095
EM: Round [167] log likelihood: -6045766.320414
EM: Round [168] log likelihood: -6045766.319752
EM: Round [169] log likelihood: -6045766.319108
EM: Round [170] log likelihood: -6045766.318481
EM: Round [171] log likelihood: -6045766.317872
EM: Round [172] log likelihood: -6045766.317280
EM: Round [173] log likelihood: -6045766.316703
EM: Round [174] log likelihood: -6045766.316143
EM: Round [175] log likelihood: -6045766.315597
EM: Round [176] log likelihood: -6045766.315066
EM: Round [177] log likelihood: -6045766.314550
EM: Round [178] log likelihood: -6045766.314047
EM: Round [179] log likelihood: -6045766.313558
EM: Round [180] log likelihood: -6045766.313081
EM: Round [181] log likelihood: -6045766.312618
EM: Round [182] log likelihood: -6045766.312166
EM: Round [183] log likelihood: -6045766.311727
EM: Round [184] log likelihood: -6045766.311299
EM: Round [185] log likelihood: -6045766.310882
EM: Round [186] log likelihood: -6045766.310476
EM: Round [187] log likelihood: -6045766.310081
EM: Round [188] log likelihood: -6045766.309696
EM: Round [189] log likelihood: -6045766.309321
EM: Round [190] log likelihood: -6045766.308955
EM: Round [191] log likelihood: -6045766.308599
EM: Round [192] log likelihood: -6045766.308252
EM: Round [193] log likelihood: -6045766.307914
EM: Round [194] log likelihood: -6045766.307584
EM: Round [195] log likelihood: -6045766.307263
EM: Round [196] log likelihood: -6045766.306950
EM: Round [197] log likelihood: -6045766.306645
EM: Round [198] log likelihood: -6045766.306347
EM: Round [199] log likelihood: -6045766.306057
EM: Round [200] log likelihood: -6045766.305774
EM: Round [201] log likelihood: -6045766.305498
EM: Round [202] log likelihood: -6045766.305228
EM: Round [203] log likelihood: -6045766.304966
EM: Round [204] log likelihood: -6045766.304709
EM: Round [205] log likelihood: -6045766.304459
EM: Round [206] log likelihood: -6045766.304215
EM: Round [207] log likelihood: -6045766.303977
EM: Round [208] log likelihood: -6045766.303745
EM: Round [209] log likelihood: -6045766.303518
EM: Round [210] log likelihood: -6045766.303297
EM: Round [211] log likelihood: -6045766.303081
EM: Round [212] log likelihood: -6045766.302870
EM: Round [213] log likelihood: -6045766.302664
EM: Round [214] log likelihood: -6045766.302463
EM: Round [215] log likelihood: -6045766.302266
EM: Round [216] log likelihood: -6045766.302074
EM: Round [217] log likelihood: -6045766.301887
EM: Round [218] log likelihood: -6045766.301704
EM: Round [219] log likelihood: -6045766.301525
EM: Round [220] log likelihood: -6045766.301350
EM: Round [221] log likelihood: -6045766.301179
EM: Round [222] log likelihood: -6045766.301012
EM: Round [223] log likelihood: -6045766.300849
EM: Round [224] log likelihood: -6045766.300690
EM: Round [225] log likelihood: -6045766.300534
EM: Round [226] log likelihood: -6045766.300381
EM: Round [227] log likelihood: -6045766.300232
EM: Round [228] log likelihood: -6045766.300086
EM: Round [229] log likelihood: -6045766.299944
EM: Round [230] log likelihood: -6045766.299804
EM: Round [231] log likelihood: -6045766.299668
EM: Round [232] log likelihood: -6045766.299534
EM: Round [233] log likelihood: -6045766.299404
EM: Round [234] log likelihood: -6045766.299276
EM: Round [235] log likelihood: -6045766.299151
EM: Round [236] log likelihood: -6045766.299028
EM: Round [237] log likelihood: -6045766.298909
EM: Round [238] log likelihood: -6045766.298791
EM: Round [239] log likelihood: -6045766.298676
EM: Round [240] log likelihood: -6045766.298564
EM: Round [241] log likelihood: -6045766.298454
EM: Round [242] log likelihood: -6045766.298346
EM: Round [243] log likelihood: -6045766.298241
EM: Round [244] log likelihood: -6045766.298137
EM: Round [245] log likelihood: -6045766.298036
EM: Round [246] log likelihood: -6045766.297936
EM: Stopping iterations at round 246 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.HCjJX4hR00/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.HCjJX4hR00/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.HCjJX4hR00/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 294892385 > /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.HCjJX4hR00/ctat_genome_lib_build_dir > /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.HCjJX4hR00/ctat_genome_lib_build_dir --annotate /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.HCjJX4hR00/ctat_genome_lib_build_dir
-done, see /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.HCjJX4hR00/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 426, filtered: 2175)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.HCjJX4hR00/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.HCjJX4hR00/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000226471.6]
WARNING, no entry stored in dbm for [ENSG00000287092.1]
WARNING, no entry stored in dbm for [ENSG00000233562.1]
WARNING, no entry stored in dbm for [ENSG00000273125.2]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000225882.1]
WARNING, no entry stored in dbm for [ENSG00000244558.6]
WARNING, no entry stored in dbm for [ENSG00000244558.6]
WARNING, no entry stored in dbm for [ENSG00000250742.4]
WARNING, no entry stored in dbm for [ENSG00000239345.2]
WARNING, no entry stored in dbm for [ENSG00000227038.3]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000254349.6]
WARNING, no entry stored in dbm for [ENSG00000204790.9]
WARNING, no entry stored in dbm for [ENSG00000254459.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000222022.1]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000255992.1]
WARNING, no entry stored in dbm for [ENSG00000230510.7]
WARNING, no entry stored in dbm for [ENSG00000238198.2]
WARNING, no entry stored in dbm for [ENSG00000285999.1]
WARNING, no entry stored in dbm for [ENSG00000234493.4]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000261039.3]
WARNING, no entry stored in dbm for [ENSG00000251216.2]
WARNING, no entry stored in dbm for [ENSG00000259393.2]
WARNING, no entry stored in dbm for [ENSG00000250788.1]
WARNING, no entry stored in dbm for [ENSG00000255652.4]
WARNING, no entry stored in dbm for [ENSG00000225914.3]
WARNING, no entry stored in dbm for [ENSG00000232894.1]
WARNING, no entry stored in dbm for [ENSG00000230572.5]
WARNING, no entry stored in dbm for [ENSG00000235944.8]
WARNING, no entry stored in dbm for [ENSG00000250995.1]
WARNING, no entry stored in dbm for [ENSG00000228393.4]
WARNING, no entry stored in dbm for [ENSG00000251915.1]
WARNING, no entry stored in dbm for [ENSG00000123870.10]
WARNING, no entry stored in dbm for [ENSG00000224966.4]
WARNING, no entry stored in dbm for [ENSG00000260186.5]
WARNING, no entry stored in dbm for [ENSG00000260922.2]
WARNING, no entry stored in dbm for [ENSG00000259642.2]
WARNING, no entry stored in dbm for [ENSG00000227082.3]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000234617.2]
WARNING, no entry stored in dbm for [ENSG00000221962.5]
WARNING, no entry stored in dbm for [ENSG00000207523.1]
WARNING, no entry stored in dbm for [ENSG00000259116.2]
WARNING, no entry stored in dbm for [ENSG00000285666.1]
WARNING, no entry stored in dbm for [ENSG00000239906.1]
WARNING, no entry stored in dbm for [ENSG00000247950.7]
WARNING, no entry stored in dbm for [ENSG00000225648.5]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000281641.3]
WARNING, no entry stored in dbm for [ENSG00000281641.3]
WARNING, no entry stored in dbm for [ENSG00000241749.4]
WARNING, no entry stored in dbm for [ENSG00000213729.3]
WARNING, no entry stored in dbm for [ENSG00000242931.1]
WARNING, no entry stored in dbm for [ENSG00000234253.1]
WARNING, no entry stored in dbm for [ENSG00000241950.1]
WARNING, no entry stored in dbm for [ENSG00000235420.7]
WARNING, no entry stored in dbm for [ENSG00000215002.2]
WARNING, no entry stored in dbm for [ENSG00000269244.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000272020.1]
WARNING, no entry stored in dbm for [ENSG00000242156.1]
WARNING, no entry stored in dbm for [ENSG00000285835.1]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000250842.1]
WARNING, no entry stored in dbm for [ENSG00000230510.7]
WARNING, no entry stored in dbm for [ENSG00000278665.1]
WARNING, no entry stored in dbm for [ENSG00000270344.3]
WARNING, no entry stored in dbm for [ENSG00000203588.3]
WARNING, no entry stored in dbm for [ENSG00000274461.2]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000258853.1]
WARNING, no entry stored in dbm for [ENSG00000181577.16]
WARNING, no entry stored in dbm for [ENSG00000270231.4]
WARNING, no entry stored in dbm for [ENSG00000279369.1]
WARNING, no entry stored in dbm for [ENSG00000270231.4]
WARNING, no entry stored in dbm for [ENSG00000279369.1]
WARNING, no entry stored in dbm for [ENSG00000249328.3]
WARNING, no entry stored in dbm for [ENSG00000215068.8]
WARNING, no entry stored in dbm for [ENSG00000171889.5]
WARNING, no entry stored in dbm for [ENSG00000251535.1]
WARNING, no entry stored in dbm for [ENSG00000231969.2]
WARNING, no entry stored in dbm for [ENSG00000280046.1]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000247157.7]
WARNING, no entry stored in dbm for [ENSG00000236751.2]
WARNING, no entry stored in dbm for [ENSG00000228393.4]
WARNING, no entry stored in dbm for [ENSG00000249628.3]
WARNING, no entry stored in dbm for [ENSG00000224405.1]
WARNING, no entry stored in dbm for [ENSG00000250462.8]
WARNING, no entry stored in dbm for [ENSG00000244627.5]
WARNING, no entry stored in dbm for [ENSG00000286675.1]
WARNING, no entry stored in dbm for [ENSG00000286675.1]
WARNING, no entry stored in dbm for [ENSG00000255733.6]
WARNING, no entry stored in dbm for [ENSG00000261405.2]
WARNING, no entry stored in dbm for [ENSG00000248785.1]
WARNING, no entry stored in dbm for [ENSG00000233299.1]
WARNING, no entry stored in dbm for [ENSG00000230457.3]
WARNING, no entry stored in dbm for [ENSG00000210194.1]
WARNING, no entry stored in dbm for [ENSG00000258570.1]
WARNING, no entry stored in dbm for [ENSG00000220875.1]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000279495.1]
WARNING, no entry stored in dbm for [ENSG00000253816.3]
WARNING, no entry stored in dbm for [ENSG00000244383.2]
WARNING, no entry stored in dbm for [ENSG00000234945.8]
WARNING, no entry stored in dbm for [ENSG00000254578.1]
WARNING, no entry stored in dbm for [ENSG00000214439.4]
WARNING, no entry stored in dbm for [ENSG00000178723.7]
WARNING, no entry stored in dbm for [ENSG00000280721.1]
WARNING, no entry stored in dbm for [ENSG00000250959.2]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000267344.1]
WARNING, no entry stored in dbm for [ENSG00000233929.1]
WARNING, no entry stored in dbm for [ENSG00000255052.5]
WARNING, no entry stored in dbm for [ENSG00000254016.3]
WARNING, no entry stored in dbm for [ENSG00000225728.2]
WARNING, no entry stored in dbm for [ENSG00000279602.1]
WARNING, no entry stored in dbm for [ENSG00000215086.2]
WARNING, no entry stored in dbm for [ENSG00000224216.1]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000249395.4]
WARNING, no entry stored in dbm for [ENSG00000254238.1]
WARNING, no entry stored in dbm for [ENSG00000229106.1]
WARNING, no entry stored in dbm for [ENSG00000229048.5]
WARNING, no entry stored in dbm for [ENSG00000286156.1]
WARNING, no entry stored in dbm for [ENSG00000254650.1]
WARNING, no entry stored in dbm for [ENSG00000254748.1]
WARNING, no entry stored in dbm for [ENSG00000225176.2]
WARNING, no entry stored in dbm for [ENSG00000237437.1]
WARNING, no entry stored in dbm for [ENSG00000248409.2]
WARNING, no entry stored in dbm for [ENSG00000233839.1]
WARNING, no entry stored in dbm for [ENSG00000288526.1]
WARNING, no entry stored in dbm for [ENSG00000274691.1]
WARNING, no entry stored in dbm for [ENSG00000249962.1]
WARNING, no entry stored in dbm for [ENSG00000287126.1]
WARNING, no entry stored in dbm for [ENSG00000272848.2]
WARNING, no entry stored in dbm for [ENSG00000285887.1]
WARNING, no entry stored in dbm for [ENSG00000286063.1]
WARNING, no entry stored in dbm for [ENSG00000180229.12]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000258526.7]
WARNING, no entry stored in dbm for [ENSG00000271697.1]
WARNING, no entry stored in dbm for [ENSG00000224066.1]
WARNING, no entry stored in dbm for [ENSG00000231528.3]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000213857.3]
WARNING, no entry stored in dbm for [ENSG00000226780.1]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000272150.5]
WARNING, no entry stored in dbm for [ENSG00000261546.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000213486.3]
WARNING, no entry stored in dbm for [ENSG00000224987.1]
WARNING, no entry stored in dbm for [ENSG00000250111.3]
WARNING, no entry stored in dbm for [ENSG00000205212.5]
WARNING, no entry stored in dbm for [ENSG00000248434.1]
WARNING, no entry stored in dbm for [ENSG00000254109.6]
WARNING, no entry stored in dbm for [ENSG00000261444.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000246582.3]
WARNING, no entry stored in dbm for [ENSG00000251598.2]
WARNING, no entry stored in dbm for [ENSG00000284687.1]
WARNING, no entry stored in dbm for [ENSG00000287860.1]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000225209.2]
WARNING, no entry stored in dbm for [ENSG00000262136.1]
WARNING, no entry stored in dbm for [ENSG00000248546.3]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000131484.4]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000257225.1]
WARNING, no entry stored in dbm for [ENSG00000215086.2]
WARNING, no entry stored in dbm for [ENSG00000231359.3]
WARNING, no entry stored in dbm for [ENSG00000213942.3]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000255621.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000234584.1]
WARNING, no entry stored in dbm for [ENSG00000271204.1]
WARNING, no entry stored in dbm for [ENSG00000287299.1]
WARNING, no entry stored in dbm for [ENSG00000180211.5]
WARNING, no entry stored in dbm for [ENSG00000286790.1]
WARNING, no entry stored in dbm for [ENSG00000276934.1]
WARNING, no entry stored in dbm for [ENSG00000264578.1]
WARNING, no entry stored in dbm for [ENSG00000242516.2]
WARNING, no entry stored in dbm for [ENSG00000262703.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000275532.1]
WARNING, no entry stored in dbm for [ENSG00000233870.1]
WARNING, no entry stored in dbm for [ENSG00000258891.1]
WARNING, no entry stored in dbm for [ENSG00000224699.9]
WARNING, no entry stored in dbm for [ENSG00000243004.6]
WARNING, no entry stored in dbm for [ENSG00000243554.1]
WARNING, no entry stored in dbm for [ENSG00000238228.1]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000241278.1]
WARNING, no entry stored in dbm for [ENSG00000231749.3]


	* STAR-Fusion complete.  See output: /tmp/nxf.HCjJX4hR00/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)