AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 133
Pass (FILTER=PASS): 3 (2.3%)
Fail (FILTER=FAIL): 130 (97.7%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 55
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 11
confidence_below_min(low<high): 8
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(medium<high);aih_curated_blacklist: 5
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 1
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 1
confidence_below_min(low<high);aih_curated_blacklist: 1
Breakdown by confidence:
high: 3 pass, 0 fail (total: 3)
low: 0 pass, 39 fail (total: 39)
medium: 0 pass, 91 fail (total: 91)
Arriba filter: 133 rows -> 3 PASS; wrote 1173_K3O_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filtered.tsv and 1173_K3O_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: 1173_K3O_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filter_summary.txt