-ctat genome lib [/tmp/nxf.S6CWHaneh8/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.S6CWHaneh8/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary -sample contains 152890127 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.S6CWHaneh8/ctat_genome_lib_build_dir -J /tmp/nxf.S6CWHaneh8/1173_C31_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction -O /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.S6CWHaneh8/1173_C31_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction -building interval tree based on /tmp/nxf.S6CWHaneh8/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=100000.00/min [20000], rate=70588.24/min [30000], rate=58064.52/min [40000], rate=57142.86/min [50000], rate=56603.77/min [60000], rate=56250.00/min [70000], rate=56000.00/min [80000], rate=56470.59/min [90000], rate=57446.81/min [100000], rate=57692.31/min [110000], rate=58407.08/min [120000], rate=59016.39/min [130000], rate=60000.00/min [140000], rate=61313.87/min [150000], rate=62500.00/min [160000], rate=63157.89/min [170000], rate=64556.96/min [180000], rate=64285.71/min [190000], rate=62983.43/min [200000], rate=61855.67/min [210000], rate=61165.05/min [220000], rate=60550.46/min [230000], rate=60000.00/min [240000], rate=59504.13/min [250000], rate=59288.54/min [260000], rate=59541.98/min [270000], rate=59340.66/min [280000], rate=59363.96/min [290000], rate=59385.67/min [300000], rate=59602.65/min [310000], rate=59615.38/min [320000], rate=60188.09/min [330000], rate=60550.46/min [340000], rate=60895.52/min [350000], rate=61224.49/min [360000], rate=61538.46/min [370000], rate=61838.44/min [380000], rate=62125.34/min [390000], rate=62566.84/min [400000], rate=62992.13/min [410000], rate=63402.06/min [420000], rate=63959.39/min [430000], rate=63390.66/min [440000], rate=62559.24/min [450000], rate=61784.90/min [460000], rate=61061.95/min [470000], rate=60775.86/min [480000], rate=60377.36/min [490000], rate=60122.70/min [500000], rate=59642.15/min [510000], rate=59302.33/min [520000], rate=58646.62/min [530000], rate=58135.28/min [540000], rate=57651.25/min [550000], rate=56896.55/min [560000], rate=56470.59/min [570000], rate=56065.57/min [580000], rate=55769.23/min [590000], rate=55485.89/min [600000], rate=55299.54/min [610000], rate=55120.48/min [620000], rate=55029.59/min [630000], rate=54941.86/min [640000], rate=55014.33/min [650000], rate=55084.75/min [660000], rate=55230.13/min [670000], rate=55448.28/min [680000], rate=55585.83/min [690000], rate=55795.15/min [700000], rate=56000.00/min [710000], rate=54967.74/min [720000], rate=54614.41/min [730000], rate=54275.09/min [740000], rate=53883.50/min [750000], rate=53507.73/min [760000], rate=53146.85/min [770000], rate=52920.96/min [780000], rate=52643.42/min [790000], rate=52491.69/min [800000], rate=52344.60/min [810000], rate=52314.32/min [820000], rate=52229.30/min [830000], rate=52256.03/min [840000], rate=52173.91/min [850000], rate=52147.24/min [860000], rate=52121.21/min [870000], rate=52095.81/min [880000], rate=52122.41/min [890000], rate=52199.41/min [900000], rate=52376.33/min [910000], rate=52601.16/min [920000], rate=52822.97/min [930000], rate=53092.29/min [940000], rate=53308.13/min [950000], rate=53470.92/min [960000], rate=53731.34/min [970000], rate=53888.89/min [980000], rate=53994.49/min [990000], rate=54098.36/min [1000000], rate=54151.62/min [1010000], rate=54155.50/min [1020000], rate=54255.32/min [1030000], rate=54401.41/min [1040000], rate=54593.18/min [1050000], rate=54782.61/min [1060000], rate=55064.94/min [1070000], rate=55202.06/min [1080000], rate=55384.62/min [1090000], rate=55329.95/min [1100000], rate=55183.95/min [1110000], rate=54995.87/min [1120000], rate=54812.40/min [1130000], rate=54677.42/min [1140000], rate=54632.59/min [1150000], rate=54545.45/min [1160000], rate=54460.09/min [1170000], rate=54460.82/min [1180000], rate=54419.68/min [1190000], rate=54462.24/min [1200000], rate=54504.16/min [1210000], rate=54545.45/min [1220000], rate=54626.87/min [1230000], rate=54707.19/min [1240000], rate=54826.82/min [1250000], rate=55066.08/min [1260000], rate=55303.58/min [1270000], rate=55498.91/min [1280000], rate=55732.95/min [1290000], rate=55965.29/min [1300000], rate=56155.51/min [1310000], rate=56303.72/min [1320000], rate=56450.46/min [1330000], rate=56276.45/min [1340000], rate=56106.07/min [1350000], rate=55900.62/min [1360000], rate=55699.66/min [1370000], rate=55578.09/min [1380000], rate=55495.98/min [1390000], rate=55415.28/min [1400000], rate=55372.45/min [1410000], rate=55366.49/min [1420000], rate=55396.62/min [1430000], rate=55426.36/min [1440000], rate=55455.71/min [1450000], rate=55484.69/min [1460000], rate=55548.51/min [1470000], rate=55611.60/min [1480000], rate=55708.91/min [1490000], rate=55840.10/min [1500000], rate=55935.36/min [1510000], rate=56029.68/min [1520000], rate=56123.08/min [1530000], rate=56215.55/min [1540000], rate=56307.13/min [1550000], rate=56295.40/min [1560000], rate=56182.47/min [1570000], rate=56104.82/min [1580000], rate=56061.50/min [1590000], rate=55985.92/min [1600000], rate=55944.06/min [1610000], rate=55935.15/min [1620000], rate=55926.35/min [1630000], rate=55949.66/min [1640000], rate=55940.88/min [1650000], rate=55995.48/min [1660000], rate=56018.00/min [1670000], rate=56071.63/min [1680000], rate=56155.99/min [1690000], rate=56270.81/min [1700000], rate=56353.59/min -building interval tree based on /tmp/nxf.S6CWHaneh8/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=35294.12/min [20000], rate=42857.14/min [30000], rate=46153.85/min [40000], rate=50000.00/min [50000], rate=51724.14/min [60000], rate=52941.18/min [70000], rate=53164.56/min [80000], rate=54545.45/min [90000], rate=55670.10/min [100000], rate=56603.77/min [110000], rate=57391.30/min [120000], rate=57600.00/min [130000], rate=58208.96/min [140000], rate=58741.26/min [150000], rate=59210.53/min [160000], rate=59627.33/min [170000], rate=60000.00/min [180000], rate=60335.20/min [190000], rate=60638.30/min [200000], rate=60913.71/min [210000], rate=61165.05/min [220000], rate=61111.11/min [230000], rate=61333.33/min [240000], rate=61538.46/min [250000], rate=61728.40/min [260000], rate=61904.76/min [270000], rate=62307.69/min [280000], rate=62222.22/min [290000], rate=62589.93/min [300000], rate=62937.06/min [310000], rate=63050.85/min [320000], rate=63366.34/min [330000], rate=63461.54/min [340000], rate=63750.00/min [350000], rate=64024.39/min [360000], rate=64477.61/min [370000], rate=64723.03/min [380000], rate=65329.51/min [390000], rate=65730.34/min [400000], rate=66481.99/min [410000], rate=67029.97/min [420000], rate=65968.59/min [430000], rate=64661.65/min [440000], rate=63614.46/min [450000], rate=62500.00/min [460000], rate=61469.93/min [470000], rate=60515.02/min [480000], rate=59875.26/min [490000], rate=59154.93/min [500000], rate=58593.75/min [510000], rate=57954.55/min [520000], rate=57352.94/min [530000], rate=56887.30/min [540000], rate=56250.00/min [550000], rate=56027.16/min [560000], rate=55629.14/min [570000], rate=55161.29/min [580000], rate=54889.59/min [590000], rate=54714.06/min [600000], rate=54545.45/min [610000], rate=54222.22/min [620000], rate=53991.29/min [630000], rate=53769.56/min [640000], rate=53556.49/min [650000], rate=53497.94/min [660000], rate=53369.27/min [670000], rate=53386.45/min [680000], rate=53333.33/min [690000], rate=53419.35/min [700000], rate=53435.11/min [710000], rate=53517.59/min [720000], rate=53664.60/min [730000], rate=53808.35/min [740000], rate=54014.60/min [750000], rate=54216.87/min [760000], rate=54350.42/min [770000], rate=54609.93/min [780000], rate=54736.84/min [790000], rate=54988.40/min [800000], rate=55172.41/min [810000], rate=55353.08/min [820000], rate=55218.86/min [830000], rate=54966.89/min [840000], rate=54842.22/min [850000], rate=54721.03/min [860000], rate=54718.98/min [870000], rate=54716.98/min [880000], rate=54771.78/min [890000], rate=54881.81/min [900000], rate=54933.88/min [910000], rate=55095.86/min [920000], rate=55200.00/min [930000], rate=55357.14/min [940000], rate=55511.81/min [950000], rate=55501.46/min [960000], rate=55759.92/min [970000], rate=55961.54/min [980000], rate=56160.46/min [990000], rate=56250.00/min [1000000], rate=56338.03/min [1010000], rate=56267.41/min [1020000], rate=56457.56/min [1030000], rate=56593.41/min [1040000], rate=56675.75/min [1050000], rate=56603.77/min [1060000], rate=56989.25/min [1070000], rate=57168.30/min [1080000], rate=57243.82/min [1090000], rate=57318.14/min [1100000], rate=57491.29/min [1110000], rate=57413.79/min [1120000], rate=57485.03/min [1130000], rate=57604.08/min [1140000], rate=57721.52/min [1150000], rate=57837.38/min [1160000], rate=57855.36/min [1170000], rate=57825.37/min [1180000], rate=57890.43/min [1190000], rate=57954.55/min [1200000], rate=58064.52/min [1210000], rate=58126.50/min [1220000], rate=58280.25/min [1230000], rate=58432.30/min [1240000], rate=58352.94/min [1250000], rate=58229.81/min [1260000], rate=58198.61/min [1270000], rate=58167.94/min [1280000], rate=58137.77/min [1290000], rate=58108.11/min [1300000], rate=58078.93/min [1310000], rate=58136.09/min [1320000], rate=58149.78/min [1330000], rate=58163.27/min [1340000], rate=58260.87/min [1350000], rate=58315.33/min [1360000], rate=58327.38/min [1370000], rate=58422.17/min [1380000], rate=58023.83/min [1390000], rate=57045.14/min [1400000], rate=56338.03/min [1410000], rate=55694.54/min [1420000], rate=55145.63/min [1430000], rate=55105.97/min [1440000], rate=54752.85/min [1450000], rate=54273.24/min [1460000], rate=53742.33/min [1470000], rate=53196.62/min [1480000], rate=52669.04/min [1490000], rate=52280.70/min [1500000], rate=51873.20/min [1510000], rate=51477.27/min [1520000], rate=51235.96/min [1530000], rate=51056.73/min [1540000], rate=50853.05/min [1550000], rate=50708.83/min [1560000], rate=50594.59/min [1570000], rate=50563.61/min [1580000], rate=50533.05/min [1590000], rate=50502.91/min [1600000], rate=50526.32/min [1610000], rate=50575.92/min [1620000], rate=50625.00/min [1630000], rate=50699.84/min [1640000], rate=50721.65/min [1650000], rate=50873.59/min [1660000], rate=51024.59/min [1670000], rate=51148.55/min [1680000], rate=51271.62/min [1690000], rate=51472.08/min [1700000], rate=51593.32/min -building interval tree based on /tmp/nxf.S6CWHaneh8/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.05 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=92307.69/min [30000], rate=100000.00/min [40000], rate=100000.00/min [50000], rate=96774.19/min [60000], rate=92307.69/min [70000], rate=91304.35/min [80000], rate=88888.89/min [90000], rate=88524.59/min [100000], rate=88235.29/min [110000], rate=89189.19/min [120000], rate=88888.89/min [130000], rate=89655.17/min [140000], rate=87500.00/min [150000], rate=84112.15/min [160000], rate=82051.28/min [170000], rate=80314.96/min [180000], rate=78832.12/min [190000], rate=78082.19/min [200000], rate=76923.08/min [210000], rate=76363.64/min [220000], rate=75862.07/min [230000], rate=75824.18/min [240000], rate=75789.47/min [250000], rate=76142.13/min [260000], rate=76097.56/min [270000], rate=76415.09/min [280000], rate=76712.33/min [290000], rate=77678.57/min [300000], rate=78260.87/min [310000], rate=79148.94/min [320000], rate=80672.27/min [330000], rate=83193.28/min [340000], rate=85355.65/min [350000], rate=86776.86/min [360000], rate=87449.39/min [370000], rate=88446.22/min [380000], rate=90476.19/min [390000], rate=91406.25/min [400000], rate=91954.02/min [410000], rate=90109.89/min [420000], rate=88732.39/min [430000], rate=87457.63/min [440000], rate=86274.51/min [450000], rate=85173.50/min [460000], rate=84146.34/min [470000], rate=83185.84/min [480000], rate=82521.49/min [490000], rate=82352.94/min [500000], rate=81967.21/min [510000], rate=81600.00/min [520000], rate=81462.14/min [530000], rate=81538.46/min [540000], rate=81407.04/min [550000], rate=82089.55/min [560000], rate=82962.96/min [570000], rate=82808.72/min [580000], rate=83054.89/min [590000], rate=81566.82/min [600000], rate=80000.00/min [610000], rate=78709.68/min [620000], rate=77824.27/min [630000], rate=76829.27/min [640000], rate=75590.55/min [650000], rate=74427.48/min [660000], rate=73605.95/min [670000], rate=72826.09/min [680000], rate=71328.67/min [690000], rate=70648.46/min [700000], rate=70116.86/min [710000], rate=69268.29/min [720000], rate=68789.81/min [730000], rate=68437.50/min [740000], rate=67889.91/min [750000], rate=67567.57/min [760000], rate=66862.17/min [770000], rate=66284.07/min [780000], rate=66008.46/min [790000], rate=65650.97/min [800000], rate=65484.31/min [810000], rate=65060.24/min [820000], rate=64566.93/min [830000], rate=64507.77/min [840000], rate=64203.82/min [850000], rate=63909.77/min [860000], rate=63625.15/min [870000], rate=63503.65/min [880000], rate=63461.54/min [890000], rate=63495.84/min [900000], rate=63454.76/min [910000], rate=63488.37/min [920000], rate=63741.34/min [930000], rate=63990.83/min [940000], rate=64090.91/min [950000], rate=64261.56/min [960000], rate=64429.53/min [970000], rate=64238.41/min [980000], rate=63022.51/min [990000], rate=61875.00/min [1000000], rate=60913.71/min [1010000], rate=60000.00/min [1020000], rate=59359.84/min [1030000], rate=58745.25/min [1040000], rate=58208.96/min [1050000], rate=57745.19/min [1060000], rate=57348.96/min [1070000], rate=56965.39/min [1080000], rate=56643.36/min [1090000], rate=56427.96/min [1100000], rate=56218.06/min [1110000], rate=56013.46/min [1120000], rate=55860.35/min [1130000], rate=55665.02/min [1140000], rate=55519.48/min [1150000], rate=55377.21/min [1160000], rate=55238.10/min [1170000], rate=55232.10/min [1180000], rate=55183.16/min [1190000], rate=55177.74/min [1200000], rate=55172.41/min [1210000], rate=55167.17/min [1220000], rate=55037.59/min [1230000], rate=55115.76/min [1240000], rate=55111.11/min [1250000], rate=55106.54/min [1260000], rate=55102.04/min [1270000], rate=55057.80/min [1280000], rate=55053.76/min [1290000], rate=55049.79/min [1300000], rate=55007.05/min [1310000], rate=54926.62/min [1320000], rate=54847.65/min [1330000], rate=54807.69/min [1340000], rate=54805.73/min [1350000], rate=54840.89/min [1360000], rate=54875.59/min [1370000], rate=54909.82/min [1380000], rate=54980.08/min [1390000], rate=55049.50/min [1400000], rate=55154.30/min [1410000], rate=55221.93/min [1420000], rate=55360.62/min [1430000], rate=55462.18/min [1440000], rate=55562.70/min [1450000], rate=55662.19/min [1460000], rate=55760.66/min [1470000], rate=55787.48/min [1480000], rate=55884.20/min [1490000], rate=55909.94/min [1500000], rate=56004.98/min [1510000], rate=56064.36/min [1520000], rate=55711.67/min [1530000], rate=55035.97/min [1540000], rate=54416.96/min [1550000], rate=53850.61/min [1560000], rate=53302.96/min [1570000], rate=52832.31/min [1580000], rate=52375.69/min [1590000], rate=51960.78/min [1600000], rate=51557.47/min [1610000], rate=51301.12/min [1620000], rate=51077.25/min [1630000], rate=50752.46/min [1640000], rate=50591.26/min [1650000], rate=50330.45/min [1660000], rate=50125.82/min [1670000], rate=50000.00/min [1680000], rate=49802.37/min [1690000], rate=49391.13/min [1700000], rate=49014.90/min -building interval tree based on /tmp/nxf.S6CWHaneh8/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.05 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=109090.91/min [30000], rate=105882.35/min [40000], rate=104347.83/min [50000], rate=103448.28/min [60000], rate=102857.14/min [70000], rate=100000.00/min [80000], rate=100000.00/min [90000], rate=101886.79/min [100000], rate=103448.28/min [110000], rate=103125.00/min [120000], rate=101408.45/min [130000], rate=100000.00/min [140000], rate=98823.53/min [150000], rate=100000.00/min [160000], rate=101052.63/min [170000], rate=102000.00/min [180000], rate=102857.14/min [190000], rate=102702.70/min [200000], rate=101694.92/min [210000], rate=103278.69/min [220000], rate=103125.00/min [230000], rate=102985.07/min [240000], rate=103597.12/min [250000], rate=99337.75/min [260000], rate=89142.86/min [270000], rate=81818.18/min [280000], rate=75675.68/min [290000], rate=71604.94/min [300000], rate=68441.06/min [310000], rate=65263.16/min [320000], rate=61736.33/min [330000], rate=57894.74/min [340000], rate=54691.69/min [350000], rate=52500.00/min [360000], rate=50116.01/min [370000], rate=48366.01/min [380000], rate=46817.25/min [390000], rate=44402.28/min [400000], rate=42628.77/min [410000], rate=41000.00/min [420000], rate=39560.44/min [430000], rate=38109.31/min [440000], rate=36974.79/min [450000], rate=36048.06/min [460000], rate=35430.04/min [470000], rate=34900.99/min [480000], rate=34491.02/min [490000], rate=34146.34/min [500000], rate=33821.87/min [510000], rate=33774.83/min [520000], rate=33766.23/min [530000], rate=33829.79/min [540000], rate=33891.21/min [550000], rate=33950.62/min [560000], rate=34042.55/min [570000], rate=34131.74/min [580000], rate=34251.97/min [590000], rate=34335.60/min [600000], rate=34449.76/min [610000], rate=34528.30/min [620000], rate=34669.15/min [630000], rate=34710.74/min [640000], rate=34845.74/min [650000], rate=34977.58/min [660000], rate=35106.38/min [670000], rate=35232.25/min [680000], rate=35416.67/min [690000], rate=35597.59/min [700000], rate=35775.13/min [710000], rate=35949.37/min [720000], rate=36150.63/min [730000], rate=36318.41/min [740000], rate=36513.16/min [750000], rate=36734.69/min [760000], rate=36923.08/min [770000], rate=37168.14/min [780000], rate=37380.19/min [790000], rate=37559.43/min [800000], rate=37765.54/min [810000], rate=37998.44/min [820000], rate=38198.76/min [830000], rate=38425.93/min [840000], rate=38620.69/min [850000], rate=38607.12/min [860000], rate=38622.75/min [870000], rate=38666.67/min [880000], rate=38709.68/min [890000], rate=38751.81/min [900000], rate=38876.89/min [910000], rate=39000.00/min [920000], rate=39093.48/min [930000], rate=39185.39/min [940000], rate=39303.14/min [950000], rate=39446.37/min [960000], rate=39587.63/min [970000], rate=39726.96/min [980000], rate=39891.45/min [990000], rate=40053.94/min [1000000], rate=40241.45/min [1010000], rate=40400.00/min [1020000], rate=40610.48/min [1030000], rate=40819.02/min [1040000], rate=41052.63/min [1050000], rate=41284.40/min [1060000], rate=41514.36/min [1070000], rate=41742.52/min [1080000], rate=41968.91/min [1090000], rate=42166.34/min [1100000], rate=42280.59/min [1110000], rate=41886.79/min [1120000], rate=41507.10/min [1130000], rate=41140.78/min [1140000], rate=40811.46/min [1150000], rate=40732.00/min [1160000], rate=40654.21/min [1170000], rate=40344.83/min [1180000], rate=40045.25/min [1190000], rate=39821.53/min [1200000], rate=39625.76/min [1210000], rate=39499.46/min [1220000], rate=39418.42/min [1230000], rate=39339.02/min [1240000], rate=39281.94/min [1250000], rate=39267.02/min [1260000], rate=39170.98/min [1270000], rate=39177.38/min [1280000], rate=39163.69/min [1290000], rate=39090.91/min [1300000], rate=39078.16/min [1310000], rate=39085.03/min [1320000], rate=39091.81/min [1330000], rate=39041.10/min [1340000], rate=39067.06/min [1350000], rate=39092.66/min [1360000], rate=39136.69/min [1370000], rate=39180.17/min [1380000], rate=39260.31/min [1390000], rate=39358.19/min [1400000], rate=39455.14/min [1410000], rate=39569.69/min [1420000], rate=39683.28/min [1430000], rate=39795.92/min [1440000], rate=39870.79/min [1450000], rate=39926.57/min [1460000], rate=39620.08/min [1470000], rate=38786.28/min [1480000], rate=38541.67/min [1490000], rate=38451.61/min [1500000], rate=38297.87/min [1510000], rate=37876.25/min [1520000], rate=37654.83/min [1530000], rate=37301.91/min [1540000], rate=37213.05/min [1550000], rate=37140.58/min [1560000], rate=37010.68/min [1570000], rate=37013.75/min [1580000], rate=36959.06/min [1590000], rate=36933.80/min [1600000], rate=36866.36/min [1610000], rate=36716.08/min [1620000], rate=36762.48/min [1630000], rate=36836.16/min [1640000], rate=36909.23/min [1650000], rate=36926.52/min [1660000], rate=36998.51/min [1670000], rate=36987.82/min [1680000], rate=36909.56/min [1690000], rate=36845.93/min [1700000], rate=36783.27/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.S6CWHaneh8/ctat_genome_lib_build_dir --filt_file /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 12000000.00 reads per min processed... 4500000.00 reads per min processed... 4000000.00 reads per min processed... 3750000.00 reads per min processed... 3272727.27 reads per min processed... 3230769.23 reads per min processed... 3200000.00 reads per min processed... 3000000.00 reads per min processed... 3000000.00 reads per min processed... 3000000.00 reads per min processed... 3000000.00 reads per min processed... 2888888.89 reads per min processed... 2800000.00 reads per min processed... 2812500.00 reads per min processed... 2823529.41 reads per min processed... 2756756.76 reads per min processed... 2700000.00 reads per min processed... 2714285.71 reads per min processed... 2727272.73 reads per min processed... 2680851.06 reads per min processed... 2693877.55 reads per min processed... 2705882.35 reads per min processed... 2716981.13 reads per min processed... 2678571.43 reads per min processed... 2689655.17 reads per min processed... 2700000.00 reads per min processed... 2666666.67 reads per min processed... 2718750.00 reads per min processed... 2769230.77 reads per min processed... 2776119.40 reads per min processed... 2742857.14 reads per min processed... 2750000.00 reads per min processed... 2756756.76 reads per min processed... 2727272.73 reads per min processed... 2734177.22 reads per min processed... 2707317.07 reads per min processed... 2714285.71 reads per min processed... 2689655.17 reads per min processed... 2696629.21 reads per min processed... 2703296.70 reads per min processed... 2709677.42 reads per min processed... 2687500.00 reads per min processed... 2693877.55 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.S6CWHaneh8/1173_C31_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.S6CWHaneh8/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -1808205.324387 EM: Round [1] log likelihood: -1807963.384771 EM: Round [2] log likelihood: -1807880.775876 EM: Round [3] log likelihood: -1807841.948486 EM: Round [4] log likelihood: -1807820.975533 EM: Round [5] log likelihood: -1807808.687538 EM: Round [6] log likelihood: -1807801.042318 EM: Round [7] log likelihood: -1807796.031980 EM: Round [8] log likelihood: -1807792.588433 EM: Round [9] log likelihood: -1807790.116710 EM: Round [10] log likelihood: -1807788.272671 EM: Round [11] log likelihood: -1807786.850155 EM: Round [12] log likelihood: -1807785.721337 EM: Round [13] log likelihood: -1807784.804237 EM: Round [14] log likelihood: -1807784.044514 EM: Round [15] log likelihood: -1807783.404996 EM: Round [16] log likelihood: -1807782.859499 EM: Round [17] log likelihood: -1807782.389066 EM: Round [18] log likelihood: -1807781.979627 EM: Round [19] log likelihood: -1807781.620504 EM: Round [20] log likelihood: -1807781.303430 EM: Round [21] log likelihood: -1807781.021887 EM: Round [22] log likelihood: -1807780.770653 EM: Round [23] log likelihood: -1807780.545490 EM: Round [24] log likelihood: -1807780.342911 EM: Round [25] log likelihood: -1807780.160021 EM: Round [26] log likelihood: -1807779.994390 EM: Round [27] log likelihood: -1807779.843963 EM: Round [28] log likelihood: -1807779.706989 EM: Round [29] log likelihood: -1807779.581966 EM: Round [30] log likelihood: -1807779.467597 EM: Round [31] log likelihood: -1807779.362761 EM: Round [32] log likelihood: -1807779.266477 EM: Round [33] log likelihood: -1807779.177889 EM: Round [34] log likelihood: -1807779.096244 EM: Round [35] log likelihood: -1807779.020879 EM: Round [36] log likelihood: -1807778.951207 EM: Round [37] log likelihood: -1807778.886706 EM: Round [38] log likelihood: -1807778.826913 EM: Round [39] log likelihood: -1807778.771413 EM: Round [40] log likelihood: -1807778.719836 EM: Round [41] log likelihood: -1807778.671850 EM: Round [42] log likelihood: -1807778.627155 EM: Round [43] log likelihood: -1807778.585483 EM: Round [44] log likelihood: -1807778.546590 EM: Round [45] log likelihood: -1807778.510256 EM: Round [46] log likelihood: -1807778.476281 EM: Round [47] log likelihood: -1807778.444485 EM: Round [48] log likelihood: -1807778.414703 EM: Round [49] log likelihood: -1807778.386783 EM: Round [50] log likelihood: -1807778.360591 EM: Round [51] log likelihood: -1807778.335999 EM: Round [52] log likelihood: -1807778.312893 EM: Round [53] log likelihood: -1807778.291169 EM: Round [54] log likelihood: -1807778.270729 EM: Round [55] log likelihood: -1807778.251486 EM: Round [56] log likelihood: -1807778.233357 EM: Round [57] log likelihood: -1807778.216268 EM: Round [58] log likelihood: -1807778.200148 EM: Round [59] log likelihood: -1807778.184935 EM: Round [60] log likelihood: -1807778.170570 EM: Round [61] log likelihood: -1807778.156996 EM: Round [62] log likelihood: -1807778.144164 EM: Round [63] log likelihood: -1807778.132028 EM: Round [64] log likelihood: -1807778.120542 EM: Round [65] log likelihood: -1807778.109668 EM: Round [66] log likelihood: -1807778.099367 EM: Round [67] log likelihood: -1807778.089605 EM: Round [68] log likelihood: -1807778.080349 EM: Round [69] log likelihood: -1807778.071569 EM: Round [70] log likelihood: -1807778.063237 EM: Round [71] log likelihood: -1807778.055326 EM: Round [72] log likelihood: -1807778.047812 EM: Round [73] log likelihood: -1807778.040671 EM: Round [74] log likelihood: -1807778.033884 EM: Round [75] log likelihood: -1807778.027429 EM: Round [76] log likelihood: -1807778.021288 EM: Round [77] log likelihood: -1807778.015443 EM: Round [78] log likelihood: -1807778.009878 EM: Round [79] log likelihood: -1807778.004578 EM: Round [80] log likelihood: -1807777.999527 EM: Round [81] log likelihood: -1807777.994714 EM: Round [82] log likelihood: -1807777.990123 EM: Round [83] log likelihood: -1807777.985745 EM: Round [84] log likelihood: -1807777.981568 EM: Round [85] log likelihood: -1807777.977580 EM: Round [86] log likelihood: -1807777.973773 EM: Round [87] log likelihood: -1807777.970136 EM: Round [88] log likelihood: -1807777.966662 EM: Round [89] log likelihood: -1807777.963341 EM: Round [90] log likelihood: -1807777.960166 EM: Round [91] log likelihood: -1807777.957130 EM: Round [92] log likelihood: -1807777.954226 EM: Round [93] log likelihood: -1807777.951446 EM: Round [94] log likelihood: -1807777.948786 EM: Round [95] log likelihood: -1807777.946238 EM: Round [96] log likelihood: -1807777.943798 EM: Round [97] log likelihood: -1807777.941461 EM: Round [98] log likelihood: -1807777.939221 EM: Round [99] log likelihood: -1807777.937073 EM: Round [100] log likelihood: -1807777.935014 EM: Round [101] log likelihood: -1807777.933039 EM: Round [102] log likelihood: -1807777.931145 EM: Round [103] log likelihood: -1807777.929326 EM: Round [104] log likelihood: -1807777.927581 EM: Round [105] log likelihood: -1807777.925906 EM: Round [106] log likelihood: -1807777.924296 EM: Round [107] log likelihood: -1807777.922750 EM: Round [108] log likelihood: -1807777.921265 EM: Round [109] log likelihood: -1807777.919837 EM: Round [110] log likelihood: -1807777.918464 EM: Round [111] log likelihood: -1807777.917144 EM: Round [112] log likelihood: -1807777.915875 EM: Round [113] log likelihood: -1807777.914654 EM: Round [114] log likelihood: -1807777.913478 EM: Round [115] log likelihood: -1807777.912347 EM: Round [116] log likelihood: -1807777.911258 EM: Round [117] log likelihood: -1807777.910209 EM: Round [118] log likelihood: -1807777.909199 EM: Round [119] log likelihood: -1807777.908225 EM: Round [120] log likelihood: -1807777.907287 EM: Round [121] log likelihood: -1807777.906383 EM: Round [122] log likelihood: -1807777.905511 EM: Round [123] log likelihood: -1807777.904671 EM: Round [124] log likelihood: -1807777.903860 EM: Round [125] log likelihood: -1807777.903078 EM: Round [126] log likelihood: -1807777.902323 EM: Round [127] log likelihood: -1807777.901594 EM: Round [128] log likelihood: -1807777.900891 EM: Round [129] log likelihood: -1807777.900212 EM: Round [130] log likelihood: -1807777.899555 EM: Round [131] log likelihood: -1807777.898922 EM: Round [132] log likelihood: -1807777.898309 EM: Round [133] log likelihood: -1807777.897717 EM: Round [134] log likelihood: -1807777.897145 EM: Round [135] log likelihood: -1807777.896592 EM: Round [136] log likelihood: -1807777.896057 EM: Round [137] log likelihood: -1807777.895539 EM: Round [138] log likelihood: -1807777.895038 EM: Round [139] log likelihood: -1807777.894553 EM: Round [140] log likelihood: -1807777.894084 EM: Round [141] log likelihood: -1807777.893630 EM: Round [142] log likelihood: -1807777.893190 EM: Round [143] log likelihood: -1807777.892764 EM: Round [144] log likelihood: -1807777.892351 EM: Round [145] log likelihood: -1807777.891951 EM: Round [146] log likelihood: -1807777.891563 EM: Round [147] log likelihood: -1807777.891187 EM: Round [148] log likelihood: -1807777.890822 EM: Round [149] log likelihood: -1807777.890469 EM: Round [150] log likelihood: -1807777.890126 EM: Round [151] log likelihood: -1807777.889793 EM: Round [152] log likelihood: -1807777.889470 EM: Round [153] log likelihood: -1807777.889156 EM: Round [154] log likelihood: -1807777.888851 EM: Round [155] log likelihood: -1807777.888556 EM: Round [156] log likelihood: -1807777.888268 EM: Round [157] log likelihood: -1807777.887989 EM: Round [158] log likelihood: -1807777.887718 EM: Round [159] log likelihood: -1807777.887454 EM: Round [160] log likelihood: -1807777.887198 EM: Round [161] log likelihood: -1807777.886948 EM: Round [162] log likelihood: -1807777.886706 EM: Round [163] log likelihood: -1807777.886470 EM: Round [164] log likelihood: -1807777.886240 EM: Round [165] log likelihood: -1807777.886017 EM: Round [166] log likelihood: -1807777.885799 EM: Round [167] log likelihood: -1807777.885587 EM: Round [168] log likelihood: -1807777.885381 EM: Round [169] log likelihood: -1807777.885180 EM: Round [170] log likelihood: -1807777.884984 EM: Round [171] log likelihood: -1807777.884793 EM: Round [172] log likelihood: -1807777.884607 EM: Round [173] log likelihood: -1807777.884425 EM: Round [174] log likelihood: -1807777.884248 EM: Round [175] log likelihood: -1807777.884075 EM: Round [176] log likelihood: -1807777.883907 EM: Round [177] log likelihood: -1807777.883742 EM: Round [178] log likelihood: -1807777.883582 EM: Round [179] log likelihood: -1807777.883425 EM: Round [180] log likelihood: -1807777.883272 EM: Round [181] log likelihood: -1807777.883123 EM: Round [182] log likelihood: -1807777.882977 EM: Round [183] log likelihood: -1807777.882834 EM: Round [184] log likelihood: -1807777.882695 EM: Round [185] log likelihood: -1807777.882558 EM: Round [186] log likelihood: -1807777.882425 EM: Round [187] log likelihood: -1807777.882295 EM: Round [188] log likelihood: -1807777.882167 EM: Round [189] log likelihood: -1807777.882042 EM: Round [190] log likelihood: -1807777.881920 EM: Round [191] log likelihood: -1807777.881801 EM: Round [192] log likelihood: -1807777.881684 EM: Round [193] log likelihood: -1807777.881569 EM: Round [194] log likelihood: -1807777.881457 EM: Round [195] log likelihood: -1807777.881347 EM: Round [196] log likelihood: -1807777.881240 EM: Round [197] log likelihood: -1807777.881134 EM: Round [198] log likelihood: -1807777.881031 EM: Round [199] log likelihood: -1807777.880930 EM: Round [200] log likelihood: -1807777.880830 EM: Stopping iterations at round 200 due to insufficient improvement in likelihood. EM: Starting log likelihood: -1806027.758119 EM: Round [1] log likelihood: -1805837.504187 EM: Round [2] log likelihood: -1805774.036014 EM: Round [3] log likelihood: -1805744.760587 EM: Round [4] log likelihood: -1805729.239753 EM: Round [5] log likelihood: -1805720.303923 EM: Round [6] log likelihood: -1805714.838596 EM: Round [7] log likelihood: -1805711.318591 EM: Round [8] log likelihood: -1805708.941589 EM: Round [9] log likelihood: -1805707.264688 EM: Round [10] log likelihood: -1805706.033837 EM: Round [11] log likelihood: -1805705.098138 EM: Round [12] log likelihood: -1805704.364908 EM: Round [13] log likelihood: -1805703.775327 EM: Round [14] log likelihood: -1805703.290874 EM: Round [15] log likelihood: -1805702.885549 EM: Round [16] log likelihood: -1805702.541301 EM: Round [17] log likelihood: -1805702.245258 EM: Round [18] log likelihood: -1805701.988012 EM: Round [19] log likelihood: -1805701.762524 EM: Round [20] log likelihood: -1805701.563420 EM: Round [21] log likelihood: -1805701.386512 EM: Round [22] log likelihood: -1805701.228482 EM: Round [23] log likelihood: -1805701.086657 EM: Round [24] log likelihood: -1805700.958857 EM: Round [25] log likelihood: -1805700.843279 EM: Round [26] log likelihood: -1805700.738415 EM: Round [27] log likelihood: -1805700.642996 EM: Round [28] log likelihood: -1805700.555940 EM: Round [29] log likelihood: -1805700.476320 EM: Round [30] log likelihood: -1805700.403339 EM: Round [31] log likelihood: -1805700.336302 EM: Round [32] log likelihood: -1805700.274605 EM: Round [33] log likelihood: -1805700.217720 EM: Round [34] log likelihood: -1805700.165180 EM: Round [35] log likelihood: -1805700.116575 EM: Round [36] log likelihood: -1805700.071541 EM: Round [37] log likelihood: -1805700.029755 EM: Round [38] log likelihood: -1805699.990929 EM: Round [39] log likelihood: -1805699.954805 EM: Round [40] log likelihood: -1805699.921152 EM: Round [41] log likelihood: -1805699.889763 EM: Round [42] log likelihood: -1805699.860453 EM: Round [43] log likelihood: -1805699.833053 EM: Round [44] log likelihood: -1805699.807411 EM: Round [45] log likelihood: -1805699.783390 EM: Round [46] log likelihood: -1805699.760865 EM: Round [47] log likelihood: -1805699.739723 EM: Round [48] log likelihood: -1805699.719861 EM: Round [49] log likelihood: -1805699.701185 EM: Round [50] log likelihood: -1805699.683610 EM: Round [51] log likelihood: -1805699.667056 EM: Round [52] log likelihood: -1805699.651452 EM: Round [53] log likelihood: -1805699.636732 EM: Round [54] log likelihood: -1805699.622837 EM: Round [55] log likelihood: -1805699.609709 EM: Round [56] log likelihood: -1805699.597299 EM: Round [57] log likelihood: -1805699.585559 EM: Round [58] log likelihood: -1805699.574446 EM: Round [59] log likelihood: -1805699.563919 EM: Round [60] log likelihood: -1805699.553942 EM: Round [61] log likelihood: -1805699.544480 EM: Round [62] log likelihood: -1805699.535502 EM: Round [63] log likelihood: -1805699.526977 EM: Round [64] log likelihood: -1805699.518879 EM: Round [65] log likelihood: -1805699.511182 EM: Round [66] log likelihood: -1805699.503863 EM: Round [67] log likelihood: -1805699.496899 EM: Round [68] log likelihood: -1805699.490270 EM: Round [69] log likelihood: -1805699.483957 EM: Round [70] log likelihood: -1805699.477942 EM: Round [71] log likelihood: -1805699.472208 EM: Round [72] log likelihood: -1805699.466740 EM: Round [73] log likelihood: -1805699.461523 EM: Round [74] log likelihood: -1805699.456544 EM: Round [75] log likelihood: -1805699.451789 EM: Round [76] log likelihood: -1805699.447248 EM: Round [77] log likelihood: -1805699.442908 EM: Round [78] log likelihood: -1805699.438759 EM: Round [79] log likelihood: -1805699.434792 EM: Round [80] log likelihood: -1805699.430996 EM: Round [81] log likelihood: -1805699.427364 EM: Round [82] log likelihood: -1805699.423887 EM: Round [83] log likelihood: -1805699.420557 EM: Round [84] log likelihood: -1805699.417366 EM: Round [85] log likelihood: -1805699.414309 EM: Round [86] log likelihood: -1805699.411379 EM: Round [87] log likelihood: -1805699.408569 EM: Round [88] log likelihood: -1805699.405873 EM: Round [89] log likelihood: -1805699.403287 EM: Round [90] log likelihood: -1805699.400805 EM: Round [91] log likelihood: -1805699.398422 EM: Round [92] log likelihood: -1805699.396134 EM: Round [93] log likelihood: -1805699.393936 EM: Round [94] log likelihood: -1805699.391824 EM: Round [95] log likelihood: -1805699.389795 EM: Round [96] log likelihood: -1805699.387843 EM: Round [97] log likelihood: -1805699.385967 EM: Round [98] log likelihood: -1805699.384163 EM: Round [99] log likelihood: -1805699.382427 EM: Round [100] log likelihood: -1805699.380756 EM: Round [101] log likelihood: -1805699.379148 EM: Round [102] log likelihood: -1805699.377600 EM: Round [103] log likelihood: -1805699.376110 EM: Round [104] log likelihood: -1805699.374674 EM: Round [105] log likelihood: -1805699.373290 EM: Round [106] log likelihood: -1805699.371958 EM: Round [107] log likelihood: -1805699.370673 EM: Round [108] log likelihood: -1805699.369434 EM: Round [109] log likelihood: -1805699.368240 EM: Round [110] log likelihood: -1805699.367088 EM: Round [111] log likelihood: -1805699.365977 EM: Round [112] log likelihood: -1805699.364905 EM: Round [113] log likelihood: -1805699.363871 EM: Round [114] log likelihood: -1805699.362872 EM: Round [115] log likelihood: -1805699.361908 EM: Round [116] log likelihood: -1805699.360977 EM: Round [117] log likelihood: -1805699.360078 EM: Round [118] log likelihood: -1805699.359209 EM: Round [119] log likelihood: -1805699.358370 EM: Round [120] log likelihood: -1805699.357559 EM: Round [121] log likelihood: -1805699.356775 EM: Round [122] log likelihood: -1805699.356017 EM: Round [123] log likelihood: -1805699.355284 EM: Round [124] log likelihood: -1805699.354576 EM: Round [125] log likelihood: -1805699.353890 EM: Round [126] log likelihood: -1805699.353227 EM: Round [127] log likelihood: -1805699.352585 EM: Round [128] log likelihood: -1805699.351964 EM: Round [129] log likelihood: -1805699.351362 EM: Round [130] log likelihood: -1805699.350780 EM: Round [131] log likelihood: -1805699.350216 EM: Round [132] log likelihood: -1805699.349670 EM: Round [133] log likelihood: -1805699.349141 EM: Round [134] log likelihood: -1805699.348629 EM: Round [135] log likelihood: -1805699.348132 EM: Round [136] log likelihood: -1805699.347650 EM: Round [137] log likelihood: -1805699.347183 EM: Round [138] log likelihood: -1805699.346731 EM: Round [139] log likelihood: -1805699.346292 EM: Round [140] log likelihood: -1805699.345866 EM: Round [141] log likelihood: -1805699.345453 EM: Round [142] log likelihood: -1805699.345052 EM: Round [143] log likelihood: -1805699.344663 EM: Round [144] log likelihood: -1805699.344285 EM: Round [145] log likelihood: -1805699.343919 EM: Round [146] log likelihood: -1805699.343562 EM: Round [147] log likelihood: -1805699.343217 EM: Round [148] log likelihood: -1805699.342881 EM: Round [149] log likelihood: -1805699.342554 EM: Round [150] log likelihood: -1805699.342237 EM: Round [151] log likelihood: -1805699.341928 EM: Round [152] log likelihood: -1805699.341629 EM: Round [153] log likelihood: -1805699.341337 EM: Round [154] log likelihood: -1805699.341054 EM: Round [155] log likelihood: -1805699.340778 EM: Round [156] log likelihood: -1805699.340509 EM: Round [157] log likelihood: -1805699.340248 EM: Round [158] log likelihood: -1805699.339994 EM: Round [159] log likelihood: -1805699.339747 EM: Round [160] log likelihood: -1805699.339506 EM: Round [161] log likelihood: -1805699.339271 EM: Round [162] log likelihood: -1805699.339043 EM: Round [163] log likelihood: -1805699.338820 EM: Round [164] log likelihood: -1805699.338603 EM: Round [165] log likelihood: -1805699.338392 EM: Round [166] log likelihood: -1805699.338186 EM: Round [167] log likelihood: -1805699.337985 EM: Round [168] log likelihood: -1805699.337789 EM: Round [169] log likelihood: -1805699.337598 EM: Round [170] log likelihood: -1805699.337411 EM: Round [171] log likelihood: -1805699.337229 EM: Round [172] log likelihood: -1805699.337052 EM: Round [173] log likelihood: -1805699.336879 EM: Round [174] log likelihood: -1805699.336709 EM: Round [175] log likelihood: -1805699.336544 EM: Round [176] log likelihood: -1805699.336383 EM: Round [177] log likelihood: -1805699.336225 EM: Round [178] log likelihood: -1805699.336071 EM: Round [179] log likelihood: -1805699.335921 EM: Round [180] log likelihood: -1805699.335774 EM: Round [181] log likelihood: -1805699.335630 EM: Round [182] log likelihood: -1805699.335489 EM: Round [183] log likelihood: -1805699.335352 EM: Round [184] log likelihood: -1805699.335217 EM: Round [185] log likelihood: -1805699.335085 EM: Round [186] log likelihood: -1805699.334957 EM: Round [187] log likelihood: -1805699.334830 EM: Round [188] log likelihood: -1805699.334707 EM: Round [189] log likelihood: -1805699.334586 EM: Round [190] log likelihood: -1805699.334468 EM: Round [191] log likelihood: -1805699.334352 EM: Round [192] log likelihood: -1805699.334239 EM: Round [193] log likelihood: -1805699.334127 EM: Round [194] log likelihood: -1805699.334018 EM: Round [195] log likelihood: -1805699.333911 EM: Round [196] log likelihood: -1805699.333807 EM: Round [197] log likelihood: -1805699.333704 EM: Round [198] log likelihood: -1805699.333603 EM: Round [199] log likelihood: -1805699.333505 EM: Stopping iterations at round 199 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.S6CWHaneh8/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.S6CWHaneh8/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.S6CWHaneh8/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 152890127 > /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.S6CWHaneh8/ctat_genome_lib_build_dir > /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.S6CWHaneh8/ctat_genome_lib_build_dir --annotate /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.S6CWHaneh8/ctat_genome_lib_build_dir -done, see /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.S6CWHaneh8/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 833, filtered: 5408) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.S6CWHaneh8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.S6CWHaneh8/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000181126.13] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000214433.4] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000245958.6] WARNING, no entry stored in dbm for [ENSG00000276758.1] WARNING, no entry stored in dbm for [ENSG00000210082.2] WARNING, no entry stored in dbm for [ENSG00000284977.2] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000228109.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000233930.4] WARNING, no entry stored in dbm for [ENSG00000286948.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000278834.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000225370.1] WARNING, no entry stored in dbm for [ENSG00000288549.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000225594.1] WARNING, no entry stored in dbm for [ENSG00000228303.1] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000233930.4] WARNING, no entry stored in dbm for [ENSG00000286948.1] WARNING, no entry stored in dbm for [ENSG00000248858.7] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000288543.1] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000282057.1] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000214189.9] WARNING, no entry stored in dbm for [ENSG00000263821.1] WARNING, no entry stored in dbm for [ENSG00000247081.8] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000281641.3] WARNING, no entry stored in dbm for [ENSG00000231503.4] WARNING, no entry stored in dbm for [ENSG00000253604.1] WARNING, no entry stored in dbm for [ENSG00000249752.1] WARNING, no entry stored in dbm for [ENSG00000248323.7] WARNING, no entry stored in dbm for [ENSG00000286675.1] WARNING, no entry stored in dbm for [ENSG00000251557.2] WARNING, no entry stored in dbm for [ENSG00000270494.1] WARNING, no entry stored in dbm for [ENSG00000260318.1] WARNING, no entry stored in dbm for [ENSG00000288536.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000276298.1] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000260905.1] WARNING, no entry stored in dbm for [ENSG00000254610.3] WARNING, no entry stored in dbm for [ENSG00000205578.6] WARNING, no entry stored in dbm for [ENSG00000283795.1] WARNING, no entry stored in dbm for [ENSG00000133624.13] WARNING, no entry stored in dbm for [ENSG00000232186.1] WARNING, no entry stored in dbm for [ENSG00000248539.1] WARNING, no entry stored in dbm for [ENSG00000260005.6] WARNING, no entry stored in dbm for [ENSG00000284747.1] WARNING, no entry stored in dbm for [ENSG00000240401.9] WARNING, no entry stored in dbm for [ENSG00000204666.3] WARNING, no entry stored in dbm for [ENSG00000264985.4] WARNING, no entry stored in dbm for [ENSG00000188828.13] WARNING, no entry stored in dbm for [ENSG00000254031.6] WARNING, no entry stored in dbm for [ENSG00000285847.2] WARNING, no entry stored in dbm for [ENSG00000254635.6] WARNING, no entry stored in dbm for [ENSG00000213468.7] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000236440.1] WARNING, no entry stored in dbm for [ENSG00000241656.1] WARNING, no entry stored in dbm for [ENSG00000263563.6] WARNING, no entry stored in dbm for [ENSG00000272462.3] WARNING, no entry stored in dbm for [ENSG00000207330.1] WARNING, no entry stored in dbm for [ENSG00000199697.1] WARNING, no entry stored in dbm for [ENSG00000201392.1] WARNING, no entry stored in dbm for [ENSG00000205959.4] WARNING, no entry stored in dbm for [ENSG00000205583.13] WARNING, no entry stored in dbm for [ENSG00000272870.3] WARNING, no entry stored in dbm for [ENSG00000215506.5] WARNING, no entry stored in dbm for [ENSG00000232894.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000232600.3] WARNING, no entry stored in dbm for [ENSG00000224255.2] WARNING, no entry stored in dbm for [ENSG00000266904.6] WARNING, no entry stored in dbm for [ENSG00000172974.11] WARNING, no entry stored in dbm for [ENSG00000234911.2] WARNING, no entry stored in dbm for [ENSG00000254815.6] WARNING, no entry stored in dbm for [ENSG00000288047.1] WARNING, no entry stored in dbm for [ENSG00000235512.1] WARNING, no entry stored in dbm for [ENSG00000229372.1] WARNING, no entry stored in dbm for [ENSG00000258350.1] WARNING, no entry stored in dbm for [ENSG00000185710.9] WARNING, no entry stored in dbm for [ENSG00000239827.8] WARNING, no entry stored in dbm for [ENSG00000197254.4] WARNING, no entry stored in dbm for [ENSG00000242559.3] WARNING, no entry stored in dbm for [ENSG00000254418.1] WARNING, no entry stored in dbm for [ENSG00000257746.2] WARNING, no entry stored in dbm for [ENSG00000250258.1] WARNING, no entry stored in dbm for [ENSG00000248121.8] WARNING, no entry stored in dbm for [ENSG00000273609.1] WARNING, no entry stored in dbm for [ENSG00000243818.5] WARNING, no entry stored in dbm for [ENSG00000287920.1] WARNING, no entry stored in dbm for [ENSG00000247157.7] WARNING, no entry stored in dbm for [ENSG00000225689.2] WARNING, no entry stored in dbm for [ENSG00000267513.3] WARNING, no entry stored in dbm for [ENSG00000257464.1] WARNING, no entry stored in dbm for [ENSG00000224081.9] WARNING, no entry stored in dbm for [ENSG00000179743.4] WARNING, no entry stored in dbm for [ENSG00000241693.2] WARNING, no entry stored in dbm for [ENSG00000249673.7] WARNING, no entry stored in dbm for [ENSG00000233860.2] WARNING, no entry stored in dbm for [ENSG00000285228.1] WARNING, no entry stored in dbm for [ENSG00000249565.2] WARNING, no entry stored in dbm for [ENSG00000260470.1] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000242798.1] WARNING, no entry stored in dbm for [ENSG00000270264.1] WARNING, no entry stored in dbm for [ENSG00000234684.7] WARNING, no entry stored in dbm for [ENSG00000233184.7] WARNING, no entry stored in dbm for [ENSG00000261764.1] WARNING, no entry stored in dbm for [ENSG00000248124.8] WARNING, no entry stored in dbm for [ENSG00000233071.3] WARNING, no entry stored in dbm for [ENSG00000183298.5] WARNING, no entry stored in dbm for [ENSG00000060303.5] WARNING, no entry stored in dbm for [ENSG00000242941.1] WARNING, no entry stored in dbm for [ENSG00000243007.1] WARNING, no entry stored in dbm for [ENSG00000284513.1] WARNING, no entry stored in dbm for [ENSG00000279021.1] WARNING, no entry stored in dbm for [ENSG00000272197.2] WARNING, no entry stored in dbm for [ENSG00000260005.6] WARNING, no entry stored in dbm for [ENSG00000276956.1] WARNING, no entry stored in dbm for [ENSG00000260005.6] WARNING, no entry stored in dbm for [ENSG00000275132.1] WARNING, no entry stored in dbm for [ENSG00000266467.2] WARNING, no entry stored in dbm for [ENSG00000260005.6] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000266869.2] WARNING, no entry stored in dbm for [ENSG00000235954.7] WARNING, no entry stored in dbm for [ENSG00000213250.5] WARNING, no entry stored in dbm for [ENSG00000225470.8] WARNING, no entry stored in dbm for [ENSG00000227373.6] WARNING, no entry stored in dbm for [ENSG00000228303.1] WARNING, no entry stored in dbm for [ENSG00000286496.1] WARNING, no entry stored in dbm for [ENSG00000268006.1] WARNING, no entry stored in dbm for [ENSG00000235499.1] WARNING, no entry stored in dbm for [ENSG00000273125.2] WARNING, no entry stored in dbm for [ENSG00000228546.2] WARNING, no entry stored in dbm for [ENSG00000250778.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000282572.2] WARNING, no entry stored in dbm for [ENSG00000231721.7] WARNING, no entry stored in dbm for [ENSG00000246203.2] WARNING, no entry stored in dbm for [ENSG00000233208.6] WARNING, no entry stored in dbm for [ENSG00000275131.3] WARNING, no entry stored in dbm for [ENSG00000255622.3] WARNING, no entry stored in dbm for [ENSG00000214900.11] WARNING, no entry stored in dbm for [ENSG00000225067.4] WARNING, no entry stored in dbm for [ENSG00000273344.1] WARNING, no entry stored in dbm for [ENSG00000237025.1] WARNING, no entry stored in dbm for [ENSG00000257259.3] WARNING, no entry stored in dbm for [ENSG00000233997.5] WARNING, no entry stored in dbm for [ENSG00000288530.1] WARNING, no entry stored in dbm for [ENSG00000265135.1] WARNING, no entry stored in dbm for [ENSG00000250746.1] WARNING, no entry stored in dbm for [ENSG00000274015.2] WARNING, no entry stored in dbm for [ENSG00000232791.4] WARNING, no entry stored in dbm for [ENSG00000247556.6] WARNING, no entry stored in dbm for [ENSG00000225484.7] WARNING, no entry stored in dbm for [ENSG00000261232.2] WARNING, no entry stored in dbm for [ENSG00000247809.9] WARNING, no entry stored in dbm for [ENSG00000214807.2] WARNING, no entry stored in dbm for [ENSG00000226703.1] WARNING, no entry stored in dbm for [ENSG00000235677.1] WARNING, no entry stored in dbm for [ENSG00000240205.3] WARNING, no entry stored in dbm for [ENSG00000241709.3] WARNING, no entry stored in dbm for [ENSG00000273885.1] WARNING, no entry stored in dbm for [ENSG00000188825.14] WARNING, no entry stored in dbm for [ENSG00000283050.2] WARNING, no entry stored in dbm for [ENSG00000245864.3] WARNING, no entry stored in dbm for [ENSG00000259443.1] WARNING, no entry stored in dbm for [ENSG00000207780.1] WARNING, no entry stored in dbm for [ENSG00000207612.1] WARNING, no entry stored in dbm for [ENSG00000186594.14] WARNING, no entry stored in dbm for [ENSG00000229641.1] WARNING, no entry stored in dbm for [ENSG00000254934.5] WARNING, no entry stored in dbm for [ENSG00000272841.1] WARNING, no entry stored in dbm for [ENSG00000251136.9] WARNING, no entry stored in dbm for [ENSG00000099725.14] WARNING, no entry stored in dbm for [ENSG00000240922.1] WARNING, no entry stored in dbm for [ENSG00000226822.3] WARNING, no entry stored in dbm for [ENSG00000259719.6] WARNING, no entry stored in dbm for [ENSG00000250198.3] WARNING, no entry stored in dbm for [ENSG00000233806.7] WARNING, no entry stored in dbm for [ENSG00000220804.8] WARNING, no entry stored in dbm for [ENSG00000245937.8] WARNING, no entry stored in dbm for [ENSG00000281912.1] WARNING, no entry stored in dbm for [ENSG00000282508.2] WARNING, no entry stored in dbm for [ENSG00000224316.1] WARNING, no entry stored in dbm for [ENSG00000225269.3] WARNING, no entry stored in dbm for [ENSG00000258279.4] WARNING, no entry stored in dbm for [ENSG00000286519.1] WARNING, no entry stored in dbm for [ENSG00000237854.3] WARNING, no entry stored in dbm for [ENSG00000189196.4] WARNING, no entry stored in dbm for [ENSG00000278920.1] WARNING, no entry stored in dbm for [ENSG00000239569.3] WARNING, no entry stored in dbm for [ENSG00000228384.4] WARNING, no entry stored in dbm for [ENSG00000202422.1] WARNING, no entry stored in dbm for [ENSG00000225783.8] WARNING, no entry stored in dbm for [ENSG00000226216.1] WARNING, no entry stored in dbm for [ENSG00000176826.15] WARNING, no entry stored in dbm for [ENSG00000235734.4] WARNING, no entry stored in dbm for [ENSG00000133624.13] WARNING, no entry stored in dbm for [ENSG00000213707.2] WARNING, no entry stored in dbm for [ENSG00000279066.1] WARNING, no entry stored in dbm for [ENSG00000230140.7] WARNING, no entry stored in dbm for [ENSG00000287337.1] WARNING, no entry stored in dbm for [ENSG00000228876.4] WARNING, no entry stored in dbm for [ENSG00000272645.3] WARNING, no entry stored in dbm for [ENSG00000277053.4] WARNING, no entry stored in dbm for [ENSG00000280171.1] WARNING, no entry stored in dbm for [ENSG00000214184.3] WARNING, no entry stored in dbm for [ENSG00000198468.9] WARNING, no entry stored in dbm for [ENSG00000284699.1] WARNING, no entry stored in dbm for [ENSG00000279115.2] WARNING, no entry stored in dbm for [ENSG00000253686.2] WARNING, no entry stored in dbm for [ENSG00000253341.1] WARNING, no entry stored in dbm for [ENSG00000249188.1] WARNING, no entry stored in dbm for [ENSG00000277952.1] WARNING, no entry stored in dbm for [ENSG00000280739.3] WARNING, no entry stored in dbm for [ENSG00000233527.9] WARNING, no entry stored in dbm for [ENSG00000256508.2] WARNING, no entry stored in dbm for [ENSG00000218565.2] WARNING, no entry stored in dbm for [ENSG00000177337.8] WARNING, no entry stored in dbm for [ENSG00000287236.1] WARNING, no entry stored in dbm for [ENSG00000278903.3] WARNING, no entry stored in dbm for [ENSG00000259295.6] WARNING, no entry stored in dbm for [ENSG00000250391.1] WARNING, no entry stored in dbm for [ENSG00000228053.1] WARNING, no entry stored in dbm for [ENSG00000225546.6] WARNING, no entry stored in dbm for [ENSG00000227645.2] WARNING, no entry stored in dbm for [ENSG00000241168.1] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000260693.1] WARNING, no entry stored in dbm for [ENSG00000228409.6] WARNING, no entry stored in dbm for [ENSG00000227113.2] WARNING, no entry stored in dbm for [ENSG00000223552.1] WARNING, no entry stored in dbm for [ENSG00000205464.13] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000234997.2] WARNING, no entry stored in dbm for [ENSG00000226085.3] WARNING, no entry stored in dbm for [ENSG00000254166.3] WARNING, no entry stored in dbm for [ENSG00000285106.2] WARNING, no entry stored in dbm for [ENSG00000271848.2] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000226445.2] WARNING, no entry stored in dbm for [ENSG00000245937.8] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000265018.6] WARNING, no entry stored in dbm for [ENSG00000233967.7] WARNING, no entry stored in dbm for [ENSG00000262837.1] WARNING, no entry stored in dbm for [ENSG00000220412.1] WARNING, no entry stored in dbm for [ENSG00000256826.1] WARNING, no entry stored in dbm for [ENSG00000224729.6] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000278144.1] WARNING, no entry stored in dbm for [ENSG00000266282.1] WARNING, no entry stored in dbm for [ENSG00000231324.1] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000231317.1] WARNING, no entry stored in dbm for [ENSG00000237037.9] WARNING, no entry stored in dbm for [ENSG00000207392.1] WARNING, no entry stored in dbm for [ENSG00000272540.1] WARNING, no entry stored in dbm for [ENSG00000287887.1] WARNING, no entry stored in dbm for [ENSG00000279459.1] WARNING, no entry stored in dbm for [ENSG00000235749.3] WARNING, no entry stored in dbm for [ENSG00000226465.3] WARNING, no entry stored in dbm for [ENSG00000279149.1] WARNING, no entry stored in dbm for [ENSG00000286215.1] WARNING, no entry stored in dbm for [ENSG00000180867.11] WARNING, no entry stored in dbm for [ENSG00000228395.2] WARNING, no entry stored in dbm for [ENSG00000258656.1] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000288543.1] WARNING, no entry stored in dbm for [ENSG00000226310.1] WARNING, no entry stored in dbm for [ENSG00000269155.2] WARNING, no entry stored in dbm for [ENSG00000176124.15] WARNING, no entry stored in dbm for [ENSG00000258805.2] WARNING, no entry stored in dbm for [ENSG00000229186.4] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000286676.1] WARNING, no entry stored in dbm for [ENSG00000213763.4] WARNING, no entry stored in dbm for [ENSG00000213763.4] WARNING, no entry stored in dbm for [ENSG00000213985.4] WARNING, no entry stored in dbm for [ENSG00000245105.4] WARNING, no entry stored in dbm for [ENSG00000285062.1] WARNING, no entry stored in dbm for [ENSG00000275140.1] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000237017.1] WARNING, no entry stored in dbm for [ENSG00000235181.1] WARNING, no entry stored in dbm for [ENSG00000170858.10] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000285599.1] WARNING, no entry stored in dbm for [ENSG00000286181.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000255367.3] WARNING, no entry stored in dbm for [ENSG00000288108.1] WARNING, no entry stored in dbm for [ENSG00000234589.4] WARNING, no entry stored in dbm for [ENSG00000280202.1] WARNING, no entry stored in dbm for [ENSG00000219410.6] WARNING, no entry stored in dbm for [ENSG00000264301.1] WARNING, no entry stored in dbm for [ENSG00000248994.2] WARNING, no entry stored in dbm for [ENSG00000197815.4] WARNING, no entry stored in dbm for [ENSG00000260641.1] WARNING, no entry stored in dbm for [ENSG00000241313.3] WARNING, no entry stored in dbm for [ENSG00000260293.2] WARNING, no entry stored in dbm for [ENSG00000224479.6] WARNING, no entry stored in dbm for [ENSG00000284648.1] WARNING, no entry stored in dbm for [ENSG00000242759.8] WARNING, no entry stored in dbm for [ENSG00000284648.1] WARNING, no entry stored in dbm for [ENSG00000248618.1] WARNING, no entry stored in dbm for [ENSG00000282057.1] WARNING, no entry stored in dbm for [ENSG00000282057.1] WARNING, no entry stored in dbm for [ENSG00000256625.1] WARNING, no entry stored in dbm for [ENSG00000268362.6] WARNING, no entry stored in dbm for [ENSG00000234686.1] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000233230.1] WARNING, no entry stored in dbm for [ENSG00000268983.1] WARNING, no entry stored in dbm for [ENSG00000283537.2] WARNING, no entry stored in dbm for [ENSG00000271855.1] WARNING, no entry stored in dbm for [ENSG00000259589.2] WARNING, no entry stored in dbm for [ENSG00000284613.1] WARNING, no entry stored in dbm for [ENSG00000283674.3] WARNING, no entry stored in dbm for [ENSG00000287243.2] WARNING, no entry stored in dbm for [ENSG00000283674.3] WARNING, no entry stored in dbm for [ENSG00000250942.1] WARNING, no entry stored in dbm for [ENSG00000283674.3] WARNING, no entry stored in dbm for [ENSG00000279605.1] WARNING, no entry stored in dbm for [ENSG00000287692.1] WARNING, no entry stored in dbm for [ENSG00000262777.1] WARNING, no entry stored in dbm for [ENSG00000267040.6] WARNING, no entry stored in dbm for [ENSG00000267040.6] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000266642.2] WARNING, no entry stored in dbm for [ENSG00000271049.1] WARNING, no entry stored in dbm for [ENSG00000279815.1] WARNING, no entry stored in dbm for [ENSG00000285106.2] WARNING, no entry stored in dbm for [ENSG00000282393.1] WARNING, no entry stored in dbm for [ENSG00000286030.2] WARNING, no entry stored in dbm for [ENSG00000258758.1] WARNING, no entry stored in dbm for [ENSG00000268543.1] WARNING, no entry stored in dbm for [ENSG00000268739.1] WARNING, no entry stored in dbm for [ENSG00000226400.2] WARNING, no entry stored in dbm for [ENSG00000276868.1] WARNING, no entry stored in dbm for [ENSG00000235253.1] WARNING, no entry stored in dbm for [ENSG00000260633.1] WARNING, no entry stored in dbm for [ENSG00000216895.9] WARNING, no entry stored in dbm for [ENSG00000244701.1] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000269706.1] WARNING, no entry stored in dbm for [ENSG00000242405.2] WARNING, no entry stored in dbm for [ENSG00000242593.7] WARNING, no entry stored in dbm for [ENSG00000266869.2] WARNING, no entry stored in dbm for [ENSG00000268650.3] WARNING, no entry stored in dbm for [ENSG00000279110.1] WARNING, no entry stored in dbm for [ENSG00000268030.1] WARNING, no entry stored in dbm for [ENSG00000226624.1] WARNING, no entry stored in dbm for [ENSG00000273387.1] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000243554.1] WARNING, no entry stored in dbm for [ENSG00000168992.4] WARNING, no entry stored in dbm for [ENSG00000250522.1] WARNING, no entry stored in dbm for [ENSG00000287011.1] WARNING, no entry stored in dbm for [ENSG00000287229.1] WARNING, no entry stored in dbm for [ENSG00000251595.7] WARNING, no entry stored in dbm for [ENSG00000251595.7] * STAR-Fusion complete. See output: /tmp/nxf.S6CWHaneh8/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)