Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c5/f212ec0e186db82eafe30d6f04b247/1173_G2E_T1_RNA_SLD_01_A23T55JLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/6651933de29f0a593d6fcc7b9e7a20/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/6651933de29f0a593d6fcc7b9e7a20/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory