Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
7,tih_rna_sample_00604_B23MVV7LT4_1,TAGCGAGG-TTGCTCAC,61405778,60410653,995125,0,0.0150,0.9838,0.0162,0.0000
7,tih_rna_sample_00612_B23MVV7LT4_1,CCAACTGT-GCGCTAGA,48004162,46991925,1012237,0,0.0117,0.9789,0.0211,0.0000
7,tih_rna_sample_00613_B23MVV7LT4_1,GAGTAGTG-GCGATGCC,40473810,39782036,691774,0,0.0099,0.9829,0.0171,0.0000
7,tih_rna_sample_00614_B23MVV7LT4_1,CCAGTATT-ACGAAGCG,32799756,32232422,567334,0,0.0080,0.9827,0.0173,0.0000
7,tih_rna_sample_00616_B23MVV7LT4_1,ATCATACC-ATGTCGTA,43899190,43130932,768258,0,0.0107,0.9825,0.0175,0.0000
7,tih_rna_sample_00618_B23MVV7LT4_1,ATTCGCAC-TCTGTATG,50561126,49804799,756327,0,0.0124,0.9850,0.0150,0.0000
7,tih_rna_sample_00619_B23MVV7LT4_1,CTCTTCAG-TTGTCTCT,31117710,30622190,495520,0,0.0076,0.9841,0.0159,0.0000
7,tih_rna_sample_00622_B23MVV7LT4_1,CTGTATGC-TTCCGGCT,41982582,41346292,636290,0,0.0103,0.9848,0.0152,0.0000
7,tih_rna_sample_00624_B23MVV7LT4_1,TCTGACTA-TAACCAGA,28774358,28307453,466905,0,0.0070,0.9838,0.0162,0.0000
7,FFPE_HD789_01_RNA_13_B23MVV7LT4_1,TGTGACGT-GCAGCGTT,76468250,75086750,1381500,0,0.0187,0.9819,0.0181,0.0000
7,FFPE_V4_0002_RNA_0001_B23MVV7LT4_1,AGAAGATT-AGAAGGTA,26062060,25574258,487802,0,0.0064,0.9813,0.0187,0.0000
7,tih_rna_sample_00626_B23MVV7LT4_1,ATCCAGCA-AGAGCTCT,57546572,56336467,1210105,0,0.0141,0.9790,0.0210,0.0000
7,tih_rna_sample_00628_B23MVV7LT4_1,GCGCCATA-GAACCTCC,56400159,55302454,1097705,0,0.0138,0.9805,0.0195,0.0000
7,tih_rna_sample_00629_B23MVV7LT4_1,CACTCGCA-GAACGCGA,47457939,46628626,829313,0,0.0116,0.9825,0.0175,0.0000
7,tih_rna_sample_00635_B23MVV7LT4_1,AAGGTCAA-GCATTATA,42687240,41943763,743477,0,0.0104,0.9826,0.0174,0.0000
7,tih_rna_sample_00636_B23MVV7LT4_1,GTGACGCA-CGTTGTTG,36089405,35461064,628341,0,0.0088,0.9826,0.0174,0.0000
7,tih_rna_sample_00637_B23MVV7LT4_1,TGTCAGGC-GATTCCTT,33701504,33156312,545192,0,0.0082,0.9838,0.0162,0.0000
7,tih_rna_sample_00638_B23MVV7LT4_1,CACGTGAT-TACAACGT,31078545,30516670,561875,0,0.0076,0.9819,0.0181,0.0000
7,tih_rna_sample_00639_B23MVV7LT4_1,CCATCACG-TCTCCTGG,43292517,42315537,976980,0,0.0106,0.9774,0.0226,0.0000
7,tih_rna_sample_00569_B23MVV7LT4_1,ACCAGGAA-AGCATGGC,51471061,50442746,1028315,0,0.0126,0.9800,0.0200,0.0000
7,tih_rna_sample_00570_B23MVV7LT4_1,TAAGGCTC-GACGTTAC,41597553,40880509,717044,0,0.0102,0.9828,0.0172,0.0000
7,tih_rna_sample_00572_B23MVV7LT4_1,TGGCACTG-GCCATAGA,28786035,28284451,501584,0,0.0070,0.9826,0.0174,0.0000
7,tih_rna_sample_00574_B23MVV7LT4_1,CATATGGT-ACAGATCT,45939171,45140248,798923,0,0.0112,0.9826,0.0174,0.0000
7,tih_rna_sample_00575_B23MVV7LT4_1,GCACTACC-GAAGACTT,9842700,9605512,237188,0,0.0024,0.9759,0.0241,0.0000
7,tih_rna_sample_00576_B23MVV7LT4_1,GCATAAGA-GAGAACTG,24448155,23953516,494639,0,0.0060,0.9798,0.0202,0.0000
7,tih_rna_sample_00581_B23MVV7LT4_1,AAGGTGTA-AGCGCTAC,44271082,43465123,805959,0,0.0108,0.9818,0.0182,0.0000
7,tih_rna_sample_00582_B23MVV7LT4_1,CTTCTAAC-TGATCAGT,46064295,45308881,755414,0,0.0113,0.9836,0.0164,0.0000
7,tih_rna_sample_00583_B23MVV7LT4_1,TCGACCAG-GTTCGAAC,29394102,28884437,509665,0,0.0072,0.9827,0.0173,0.0000
7,tih_rna_sample_00584_B23MVV7LT4_1,GTGACACG-CTTACACT,4522368,4451242,71126,0,0.0011,0.9843,0.0157,0.0000
7,tih_rna_sample_00586_B23MVV7LT4_1,AATGGACG-AAGTGCAC,23759252,23274825,484427,0,0.0058,0.9796,0.0204,0.0000
7,tih_rna_sample_00588_B23MVV7LT4_1,TCTCCGTA-AGTTGTGA,44924506,44147811,776695,0,0.0110,0.9827,0.0173,0.0000
7,tih_rna_sample_00591_B23MVV7LT4_1,TGGAAGCA-TCCAACAC,39161700,38480370,681330,0,0.0096,0.9826,0.0174,0.0000
7,tih_rna_sample_00592_B23MVV7LT4_1,GATAGACA-GTGTTCAC,32605033,32040115,564918,0,0.0080,0.9827,0.0173,0.0000
7,tih_rna_sample_00594_B23MVV7LT4_1,AGCGTCTC-CCTAGGCG,61528044,58225264,3302780,0,0.0150,0.9463,0.0537,0.0000
7,tih_rna_sample_00596_B23MVV7LT4_1,CTCTATAC-CGTTCAAC,49732425,48623202,1109223,0,0.0121,0.9777,0.0223,0.0000
7,tih_rna_sample_00598_B23MVV7LT4_1,ATAGCCGG-TCTTATCC,22933835,22408807,525028,0,0.0056,0.9771,0.0229,0.0000
7,tih_rna_sample_00599_B23MVV7LT4_1,GTTCTCAT-CCTCCATT,35806911,35231017,575894,0,0.0087,0.9839,0.0161,0.0000
7,tih_rna_sample_00602_B23MVV7LT4_1,CAATGCGT-ATGTTCGC,61901659,60728922,1172737,0,0.0151,0.9811,0.0189,0.0000
7,tih_rna_sample_00676_B23MVV7LT4_1,TGAGTGTA-ATTCGCCG,44750550,43787869,962681,0,0.0109,0.9785,0.0215,0.0000
7,tih_rna_sample_00677_B23MVV7LT4_1,TGCTTCCA-CAGATGTT,2646074,2597138,48936,0,0.0006,0.9815,0.0185,0.0000
7,tih_rna_sample_00678_B23MVV7LT4_1,CCTACTCT-TGCAATTG,19883117,19566807,316310,0,0.0049,0.9841,0.0159,0.0000
7,tih_rna_sample_00679_B23MVV7LT4_1,TCGCTGAG-AATGCTCT,6619894,6456054,163840,0,0.0016,0.9753,0.0247,0.0000
7,tih_rna_sample_00680_B23MVV7LT4_1,CGCTAATT-CCATCGCA,50826951,49945341,881610,0,0.0124,0.9827,0.0173,0.0000
7,tih_rna_sample_00681_B23MVV7LT4_1,TCAGCTGT-ACAGCTCC,58680964,57530665,1150299,0,0.0143,0.9804,0.0196,0.0000
7,tih_rna_sample_00685_B23MVV7LT4_1,AGACGACA-GAGCTGGA,17669854,17266609,403245,0,0.0043,0.9772,0.0228,0.0000
7,tih_rna_sample_00686_B23MVV7LT4_1,TAGGTCCA-TGCTCATC,42138354,40129889,2008465,0,0.0103,0.9523,0.0477,0.0000
7,tih_rna_sample_00690_B23MVV7LT4_1,TAACCTGA-TCAATTGA,27019840,26587980,431860,0,0.0066,0.9840,0.0160,0.0000
7,tih_rna_sample_00691_B23MVV7LT4_1,GATAGGTG-AGACGCAA,31884785,31109748,775037,0,0.0078,0.9757,0.0243,0.0000
7,tih_rna_sample_00692_B23MVV7LT4_1,CTTGTTAC-AATTCGGT,31232071,30700767,531304,0,0.0076,0.9830,0.0170,0.0000
7,tih_rna_sample_00693_B23MVV7LT4_1,TCACCGTG-TCGCTCTG,60128413,59033250,1095163,0,0.0147,0.9818,0.0182,0.0000
7,tih_rna_sample_00694_B23MVV7LT4_1,CAACTACC-ATGCTGCA,32275946,31680199,595747,0,0.0079,0.9815,0.0185,0.0000
7,tih_rna_sample_00699_B23MVV7LT4_1,ACTCGTCC-TGGTCCTC,65197451,64050698,1146753,0,0.0159,0.9824,0.0176,0.0000
7,tih_rna_sample_00701_B23MVV7LT4_1,TCCGGAGA-ATTCCTCT,57050207,55950809,1099398,0,0.0139,0.9807,0.0193,0.0000
7,tih_rna_sample_00703_B23MVV7LT4_1,TTGTGAGA-TTCACTGG,18880689,18558140,322549,0,0.0046,0.9829,0.0171,0.0000
7,tih_rna_sample_00704_B23MVV7LT4_1,CCGAAGGT-TCTATCTG,65147354,64155675,991679,0,0.0159,0.9848,0.0152,0.0000
7,tih_rna_sample_00709_B23MVV7LT4_1,ATACACAC-AGTGTGAT,31929042,31369367,559675,0,0.0078,0.9825,0.0175,0.0000
7,tih_rna_sample_00641_B23MVV7LT4_1,AGCCTCTG-TTCGCCTT,57714879,56004290,1710589,0,0.0141,0.9704,0.0296,0.0000
7,tih_rna_sample_00643_B23MVV7LT4_1,CGGATCAT-CCGTAACC,27825254,27233388,591866,0,0.0068,0.9787,0.0213,0.0000
7,tih_rna_sample_00644_B23MVV7LT4_1,CTCTCTCT-ACTTGATT,42849105,41954012,895093,0,0.0105,0.9791,0.0209,0.0000
7,tih_rna_sample_00649_B23MVV7LT4_1,AAGGCTCC-TGAAGATG,65013029,63983644,1029385,0,0.0159,0.9842,0.0158,0.0000
7,tih_rna_sample_00650_B23MVV7LT4_1,GATAGATC-CGTACGCC,48305028,47414488,890540,0,0.0118,0.9816,0.0184,0.0000
7,tih_rna_sample_00652_B23MVV7LT4_1,GCAGAAGT-CTGCGTCG,42771133,42053171,717962,0,0.0104,0.9832,0.0168,0.0000
7,tih_rna_sample_00654_B23MVV7LT4_1,TATACGAT-CTCCTAAT,48587399,47601225,986174,0,0.0119,0.9797,0.0203,0.0000
7,tih_rna_sample_00658_B23MVV7LT4_1,AACGCTCT-GAGTAACG,29728189,29192340,535849,0,0.0073,0.9820,0.0180,0.0000
7,tih_rna_sample_00660_B23MVV7LT4_1,GATTGGCG-CTGTCTCA,32511422,31787628,723794,0,0.0079,0.9777,0.0223,0.0000
7,tih_rna_sample_00664_B23MVV7LT4_1,CAAGACGG-GTACTCCG,34552992,33954878,598114,0,0.0084,0.9827,0.0173,0.0000
7,tih_rna_sample_00665_B23MVV7LT4_1,CCACTCAA-CCTGTCTA,54778658,53657872,1120786,0,0.0134,0.9795,0.0205,0.0000
7,tih_rna_sample_00666_B23MVV7LT4_1,AGCCACTC-CCAAGAGG,29242479,25873531,3368948,0,0.0071,0.8848,0.1152,0.0000
7,tih_rna_sample_00667_B23MVV7LT4_1,GCGAAGAA-TCACGGAT,16931963,16615491,316472,0,0.0041,0.9813,0.0187,0.0000
7,tih_rna_sample_00668_B23MVV7LT4_1,TGTCGGTG-AGTTCTTC,77019112,75710583,1308529,0,0.0188,0.9830,0.0170,0.0000
7,tih_rna_sample_00669_B23MVV7LT4_1,TCTACAGC-AATGGAAG,35244004,34624200,619804,0,0.0086,0.9824,0.0176,0.0000
7,tih_rna_sample_00671_B23MVV7LT4_1,CAACCATG-ATAAGGTG,49077803,48253482,824321,0,0.0120,0.9832,0.0168,0.0000
7,tih_rna_sample_00673_B23MVV7LT4_1,CGCACATT-TGGAACGT,41392226,40735313,656913,0,0.0101,0.9841,0.0159,0.0000
7,tih_rna_sample_00711_B23MVV7LT4_1,ATCTAACC-CCTGTGGT,73407032,71897586,1509446,0,0.0179,0.9794,0.0206,0.0000
7,tih_rna_sample_00714_B23MVV7LT4_1,GCGACAAT-ATTCGTAC,56606952,55584361,1022591,0,0.0138,0.9819,0.0181,0.0000
7,tih_rna_sample_00721_B23MVV7LT4_1,TTGCCGTA-ACATTAGC,60217557,59084062,1133495,0,0.0147,0.9812,0.0188,0.0000
7,tih_rna_sample_00722_B23MVV7LT4_1,GATCCACT-GTGTTCTG,15239585,14981505,258080,0,0.0037,0.9831,0.0169,0.0000
7,tih_rna_sample_00723_B23MVV7LT4_1,TCCGAGAT-TGTCACCT,5834977,5559602,275375,0,0.0014,0.9528,0.0472,0.0000
7,tih_rna_sample_00725_B23MVV7LT4_1,ATAGAGTT-GCATAACG,49941701,48992287,949414,0,0.0122,0.9810,0.0190,0.0000
7,tih_rna_sample_00729_B23MVV7LT4_1,GCATTCCT-GAGCCTGC,45409569,36972759,8436810,0,0.0111,0.8142,0.1858,0.0000
7,tih_rna_sample_00730_B23MVV7LT4_1,AATCGTGC-GTTCAGTA,56949255,55936841,1012414,0,0.0139,0.9822,0.0178,0.0000
7,tih_rna_sample_00731_B23MVV7LT4_1,TACCGGAG-CTTAGCAG,44439563,43684931,754632,0,0.0109,0.9830,0.0170,0.0000
7,tih_rna_sample_00736_B23MVV7LT4_1,AGCACCAG-CTCGTGTA,43581072,42660077,920995,0,0.0106,0.9789,0.0211,0.0000
7,tih_rna_sample_00737_B23MVV7LT4_1,TACCTAGA-GCATTCGA,35939810,35157231,782579,0,0.0088,0.9782,0.0218,0.0000
7,tih_rna_sample_00739_B23MVV7LT4_1,CAGACTGC-ACCGGCCT,69466344,66436531,3029813,0,0.0170,0.9564,0.0436,0.0000
7,tih_rna_sample_00740_B23MVV7LT4_1,GTTAGTGC-CTGCATAG,47474882,46715596,759286,0,0.0116,0.9840,0.0160,0.0000
7,tih_rna_sample_00742_B23MVV7LT4_1,CGCAATAA-CCTACAGC,21856192,21415937,440255,0,0.0053,0.9799,0.0201,0.0000
7,tih_rna_sample_00754_B23MVV7LT4_1,TCGGTCTG-TGGTTGGT,28264533,27845892,418641,0,0.0069,0.9852,0.0148,0.0000
7,tih_rna_sample_00755_B23MVV7LT4_1,CTAGACGA-GAGGATGG,50431162,49525138,906024,0,0.0123,0.9820,0.0180,0.0000
7,tih_rna_sample_00758_B23MVV7LT4_1,GTAATACT-CTCACGAA,45550734,43284794,2265940,0,0.0111,0.9503,0.0497,0.0000
7,tih_rna_sample_00760_B23MVV7LT4_1,GATTCTTA-TGCTAGCG,30898869,30413473,485396,0,0.0075,0.9843,0.0157,0.0000
7,tih_rna_sample_00761_B23MVV7LT4_1,TGTGATCG-AGACGAGT,9582469,9366950,215519,0,0.0023,0.9775,0.0225,0.0000
7,tih_rna_sample_00762_B23MVV7LT4_1,ATCGAGAG-TGGAAGCA,37754393,37136537,617856,0,0.0092,0.9836,0.0164,0.0000
7,tih_rna_sample_00763_B23MVV7LT4_1,CTGAACGT-GCCAATAC,37448897,36816865,632032,0,0.0091,0.9831,0.0169,0.0000
7,tih_rna_sample_00764_B23MVV7LT4_1,CACTAGAC-TGTGGATT,31608904,31101597,507307,0,0.0077,0.9840,0.0160,0.0000
7,tih_rna_sample_00766_B23MVV7LT4_1,CGTCGCCT-TATCTTCT,26083178,24763498,1319680,0,0.0064,0.9494,0.0506,0.0000
7,Undetermined,,243845442,243845442,0,0,0.0596,1.0000,0.0000,0.0000