Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
8,tih_rna_sample_00604_B23MVV7LT4_1,TAGCGAGG-TTGCTCAC,60667264,59793352,873912,0,0.0149,0.9856,0.0144,0.0000
8,tih_rna_sample_00612_B23MVV7LT4_1,CCAACTGT-GCGCTAGA,47935582,46998136,937446,0,0.0118,0.9804,0.0196,0.0000
8,tih_rna_sample_00613_B23MVV7LT4_1,GAGTAGTG-GCGATGCC,40168032,39553482,614550,0,0.0099,0.9847,0.0153,0.0000
8,tih_rna_sample_00614_B23MVV7LT4_1,CCAGTATT-ACGAAGCG,32596209,32084752,511457,0,0.0080,0.9843,0.0157,0.0000
8,tih_rna_sample_00616_B23MVV7LT4_1,ATCATACC-ATGTCGTA,43656412,42971919,684493,0,0.0107,0.9843,0.0157,0.0000
8,tih_rna_sample_00618_B23MVV7LT4_1,ATTCGCAC-TCTGTATG,49993266,49340851,652415,0,0.0123,0.9869,0.0131,0.0000
8,tih_rna_sample_00619_B23MVV7LT4_1,CTCTTCAG-TTGTCTCT,30969263,30531164,438099,0,0.0076,0.9859,0.0141,0.0000
8,tih_rna_sample_00622_B23MVV7LT4_1,CTGTATGC-TTCCGGCT,41816608,41266427,550181,0,0.0103,0.9868,0.0132,0.0000
8,tih_rna_sample_00624_B23MVV7LT4_1,TCTGACTA-TAACCAGA,28743001,28330814,412187,0,0.0071,0.9857,0.0143,0.0000
8,FFPE_HD789_01_RNA_13_B23MVV7LT4_1,TGTGACGT-GCAGCGTT,75513176,74272996,1240180,0,0.0186,0.9836,0.0164,0.0000
8,FFPE_V4_0002_RNA_0001_B23MVV7LT4_1,AGAAGATT-AGAAGGTA,25760215,25303255,456960,0,0.0063,0.9823,0.0177,0.0000
8,tih_rna_sample_00626_B23MVV7LT4_1,ATCCAGCA-AGAGCTCT,57744455,56665136,1079319,0,0.0142,0.9813,0.0187,0.0000
8,tih_rna_sample_00628_B23MVV7LT4_1,GCGCCATA-GAACCTCC,55549994,54556507,993487,0,0.0137,0.9821,0.0179,0.0000
8,tih_rna_sample_00629_B23MVV7LT4_1,CACTCGCA-GAACGCGA,46979974,46243074,736900,0,0.0115,0.9843,0.0157,0.0000
8,tih_rna_sample_00635_B23MVV7LT4_1,AAGGTCAA-GCATTATA,42400268,41731434,668834,0,0.0104,0.9842,0.0158,0.0000
8,tih_rna_sample_00636_B23MVV7LT4_1,GTGACGCA-CGTTGTTG,35878141,35296787,581354,0,0.0088,0.9838,0.0162,0.0000
8,tih_rna_sample_00637_B23MVV7LT4_1,TGTCAGGC-GATTCCTT,33497813,33016512,481301,0,0.0082,0.9856,0.0144,0.0000
8,tih_rna_sample_00638_B23MVV7LT4_1,CACGTGAT-TACAACGT,31149875,30637538,512337,0,0.0077,0.9836,0.0164,0.0000
8,tih_rna_sample_00639_B23MVV7LT4_1,CCATCACG-TCTCCTGG,43082682,42170057,912625,0,0.0106,0.9788,0.0212,0.0000
8,tih_rna_sample_00569_B23MVV7LT4_1,ACCAGGAA-AGCATGGC,51285330,50315874,969456,0,0.0126,0.9811,0.0189,0.0000
8,tih_rna_sample_00570_B23MVV7LT4_1,TAAGGCTC-GACGTTAC,41210510,40574290,636220,0,0.0101,0.9846,0.0154,0.0000
8,tih_rna_sample_00572_B23MVV7LT4_1,TGGCACTG-GCCATAGA,28549309,28096630,452679,0,0.0070,0.9841,0.0159,0.0000
8,tih_rna_sample_00574_B23MVV7LT4_1,CATATGGT-ACAGATCT,45793228,45077068,716160,0,0.0113,0.9844,0.0156,0.0000
8,tih_rna_sample_00575_B23MVV7LT4_1,GCACTACC-GAAGACTT,9849168,9625218,223950,0,0.0024,0.9773,0.0227,0.0000
8,tih_rna_sample_00576_B23MVV7LT4_1,GCATAAGA-GAGAACTG,24218522,23769759,448763,0,0.0060,0.9815,0.0185,0.0000
8,tih_rna_sample_00581_B23MVV7LT4_1,AAGGTGTA-AGCGCTAC,44364787,43609561,755226,0,0.0109,0.9830,0.0170,0.0000
8,tih_rna_sample_00582_B23MVV7LT4_1,CTTCTAAC-TGATCAGT,45966426,45271333,695093,0,0.0113,0.9849,0.0151,0.0000
8,tih_rna_sample_00583_B23MVV7LT4_1,TCGACCAG-GTTCGAAC,29075128,28622619,452509,0,0.0071,0.9844,0.0156,0.0000
8,tih_rna_sample_00584_B23MVV7LT4_1,GTGACACG-CTTACACT,4506170,4444527,61643,0,0.0011,0.9863,0.0137,0.0000
8,tih_rna_sample_00586_B23MVV7LT4_1,AATGGACG-AAGTGCAC,23603675,23159285,444390,0,0.0058,0.9812,0.0188,0.0000
8,tih_rna_sample_00588_B23MVV7LT4_1,TCTCCGTA-AGTTGTGA,44806066,44089675,716391,0,0.0110,0.9840,0.0160,0.0000
8,tih_rna_sample_00591_B23MVV7LT4_1,TGGAAGCA-TCCAACAC,38855899,38240740,615159,0,0.0096,0.9842,0.0158,0.0000
8,tih_rna_sample_00592_B23MVV7LT4_1,GATAGACA-GTGTTCAC,32198209,31692429,505780,0,0.0079,0.9843,0.0157,0.0000
8,tih_rna_sample_00594_B23MVV7LT4_1,AGCGTCTC-CCTAGGCG,60890982,57723763,3167219,0,0.0150,0.9480,0.0520,0.0000
8,tih_rna_sample_00596_B23MVV7LT4_1,CTCTATAC-CGTTCAAC,49633461,48586209,1047252,0,0.0122,0.9789,0.0211,0.0000
8,tih_rna_sample_00598_B23MVV7LT4_1,ATAGCCGG-TCTTATCC,22821594,22329651,491943,0,0.0056,0.9784,0.0216,0.0000
8,tih_rna_sample_00599_B23MVV7LT4_1,GTTCTCAT-CCTCCATT,35576316,35070946,505370,0,0.0087,0.9858,0.0142,0.0000
8,tih_rna_sample_00602_B23MVV7LT4_1,CAATGCGT-ATGTTCGC,61462379,60413593,1048786,0,0.0151,0.9829,0.0171,0.0000
8,tih_rna_sample_00676_B23MVV7LT4_1,TGAGTGTA-ATTCGCCG,44399266,43505694,893572,0,0.0109,0.9799,0.0201,0.0000
8,tih_rna_sample_00677_B23MVV7LT4_1,TGCTTCCA-CAGATGTT,2652521,2608836,43685,0,0.0007,0.9835,0.0165,0.0000
8,tih_rna_sample_00678_B23MVV7LT4_1,CCTACTCT-TGCAATTG,19811334,19522459,288875,0,0.0049,0.9854,0.0146,0.0000
8,tih_rna_sample_00679_B23MVV7LT4_1,TCGCTGAG-AATGCTCT,6642180,6491346,150834,0,0.0016,0.9773,0.0227,0.0000
8,tih_rna_sample_00680_B23MVV7LT4_1,CGCTAATT-CCATCGCA,50544440,49745187,799253,0,0.0124,0.9842,0.0158,0.0000
8,tih_rna_sample_00681_B23MVV7LT4_1,TCAGCTGT-ACAGCTCC,58531116,57476157,1054959,0,0.0144,0.9820,0.0180,0.0000
8,tih_rna_sample_00685_B23MVV7LT4_1,AGACGACA-GAGCTGGA,17664436,17289696,374740,0,0.0043,0.9788,0.0212,0.0000
8,tih_rna_sample_00686_B23MVV7LT4_1,TAGGTCCA-TGCTCATC,41660410,39728480,1931930,0,0.0102,0.9536,0.0464,0.0000
8,tih_rna_sample_00690_B23MVV7LT4_1,TAACCTGA-TCAATTGA,26944501,26560736,383765,0,0.0066,0.9858,0.0142,0.0000
8,tih_rna_sample_00691_B23MVV7LT4_1,GATAGGTG-AGACGCAA,31675104,30926337,748767,0,0.0078,0.9764,0.0236,0.0000
8,tih_rna_sample_00692_B23MVV7LT4_1,CTTGTTAC-AATTCGGT,31282193,30806996,475197,0,0.0077,0.9848,0.0152,0.0000
8,tih_rna_sample_00693_B23MVV7LT4_1,TCACCGTG-TCGCTCTG,59459820,58478460,981360,0,0.0146,0.9835,0.0165,0.0000
8,tih_rna_sample_00694_B23MVV7LT4_1,CAACTACC-ATGCTGCA,31974148,31438157,535991,0,0.0079,0.9832,0.0168,0.0000
8,tih_rna_sample_00699_B23MVV7LT4_1,ACTCGTCC-TGGTCCTC,64923151,63867339,1055812,0,0.0160,0.9837,0.0163,0.0000
8,tih_rna_sample_00701_B23MVV7LT4_1,TCCGGAGA-ATTCCTCT,56334569,55348978,985591,0,0.0138,0.9825,0.0175,0.0000
8,tih_rna_sample_00703_B23MVV7LT4_1,TTGTGAGA-TTCACTGG,18899525,18611076,288449,0,0.0046,0.9847,0.0153,0.0000
8,tih_rna_sample_00704_B23MVV7LT4_1,CCGAAGGT-TCTATCTG,64356004,63498389,857615,0,0.0158,0.9867,0.0133,0.0000
8,tih_rna_sample_00709_B23MVV7LT4_1,ATACACAC-AGTGTGAT,31878121,31357592,520529,0,0.0078,0.9837,0.0163,0.0000
8,tih_rna_sample_00641_B23MVV7LT4_1,AGCCTCTG-TTCGCCTT,57622531,55982255,1640276,0,0.0142,0.9715,0.0285,0.0000
8,tih_rna_sample_00643_B23MVV7LT4_1,CGGATCAT-CCGTAACC,27803612,27256609,547003,0,0.0068,0.9803,0.0197,0.0000
8,tih_rna_sample_00644_B23MVV7LT4_1,CTCTCTCT-ACTTGATT,42811769,41985689,826080,0,0.0105,0.9807,0.0193,0.0000
8,tih_rna_sample_00649_B23MVV7LT4_1,AAGGCTCC-TGAAGATG,64473019,63533721,939298,0,0.0158,0.9854,0.0146,0.0000
8,tih_rna_sample_00650_B23MVV7LT4_1,GATAGATC-CGTACGCC,47880599,47055117,825482,0,0.0118,0.9828,0.0172,0.0000
8,tih_rna_sample_00652_B23MVV7LT4_1,GCAGAAGT-CTGCGTCG,42501675,41866465,635210,0,0.0104,0.9851,0.0149,0.0000
8,tih_rna_sample_00654_B23MVV7LT4_1,TATACGAT-CTCCTAAT,48150741,47255321,895420,0,0.0118,0.9814,0.0186,0.0000
8,tih_rna_sample_00658_B23MVV7LT4_1,AACGCTCT-GAGTAACG,29593709,29111918,481791,0,0.0073,0.9837,0.0163,0.0000
8,tih_rna_sample_00660_B23MVV7LT4_1,GATTGGCG-CTGTCTCA,32430052,31770816,659236,0,0.0080,0.9797,0.0203,0.0000
8,tih_rna_sample_00664_B23MVV7LT4_1,CAAGACGG-GTACTCCG,34170461,33641229,529232,0,0.0084,0.9845,0.0155,0.0000
8,tih_rna_sample_00665_B23MVV7LT4_1,CCACTCAA-CCTGTCTA,54554935,53525345,1029590,0,0.0134,0.9811,0.0189,0.0000
8,tih_rna_sample_00666_B23MVV7LT4_1,AGCCACTC-CCAAGAGG,29120679,25783116,3337563,0,0.0072,0.8854,0.1146,0.0000
8,tih_rna_sample_00667_B23MVV7LT4_1,GCGAAGAA-TCACGGAT,16810298,16522534,287764,0,0.0041,0.9829,0.0171,0.0000
8,tih_rna_sample_00668_B23MVV7LT4_1,TGTCGGTG-AGTTCTTC,76622846,75430603,1192243,0,0.0188,0.9844,0.0156,0.0000
8,tih_rna_sample_00669_B23MVV7LT4_1,TCTACAGC-AATGGAAG,35115651,34559474,556177,0,0.0086,0.9842,0.0158,0.0000
8,tih_rna_sample_00671_B23MVV7LT4_1,CAACCATG-ATAAGGTG,48534180,47802477,731703,0,0.0119,0.9849,0.0151,0.0000
8,tih_rna_sample_00673_B23MVV7LT4_1,CGCACATT-TGGAACGT,40958499,40357965,600534,0,0.0101,0.9853,0.0147,0.0000
8,tih_rna_sample_00711_B23MVV7LT4_1,ATCTAACC-CCTGTGGT,72873399,71479303,1394096,0,0.0179,0.9809,0.0191,0.0000
8,tih_rna_sample_00714_B23MVV7LT4_1,GCGACAAT-ATTCGTAC,56186500,55266167,920333,0,0.0138,0.9836,0.0164,0.0000
8,tih_rna_sample_00721_B23MVV7LT4_1,TTGCCGTA-ACATTAGC,59759332,58735303,1024029,0,0.0147,0.9829,0.0171,0.0000
8,tih_rna_sample_00722_B23MVV7LT4_1,GATCCACT-GTGTTCTG,15190696,14961147,229549,0,0.0037,0.9849,0.0151,0.0000
8,tih_rna_sample_00723_B23MVV7LT4_1,TCCGAGAT-TGTCACCT,5809606,5537869,271737,0,0.0014,0.9532,0.0468,0.0000
8,tih_rna_sample_00725_B23MVV7LT4_1,ATAGAGTT-GCATAACG,49445156,48573084,872072,0,0.0122,0.9824,0.0176,0.0000
8,tih_rna_sample_00729_B23MVV7LT4_1,GCATTCCT-GAGCCTGC,44994021,36710134,8283887,0,0.0111,0.8159,0.1841,0.0000
8,tih_rna_sample_00730_B23MVV7LT4_1,AATCGTGC-GTTCAGTA,56628181,55720968,907213,0,0.0139,0.9840,0.0160,0.0000
8,tih_rna_sample_00731_B23MVV7LT4_1,TACCGGAG-CTTAGCAG,43876044,43206235,669809,0,0.0108,0.9847,0.0153,0.0000
8,tih_rna_sample_00736_B23MVV7LT4_1,AGCACCAG-CTCGTGTA,43129786,42287037,842749,0,0.0106,0.9805,0.0195,0.0000
8,tih_rna_sample_00737_B23MVV7LT4_1,TACCTAGA-GCATTCGA,35516404,34801293,715111,0,0.0087,0.9799,0.0201,0.0000
8,tih_rna_sample_00739_B23MVV7LT4_1,CAGACTGC-ACCGGCCT,68807301,66009838,2797463,0,0.0169,0.9593,0.0407,0.0000
8,tih_rna_sample_00740_B23MVV7LT4_1,GTTAGTGC-CTGCATAG,47077510,46417437,660073,0,0.0116,0.9860,0.0140,0.0000
8,tih_rna_sample_00742_B23MVV7LT4_1,CGCAATAA-CCTACAGC,21676587,21269206,407381,0,0.0053,0.9812,0.0188,0.0000
8,tih_rna_sample_00754_B23MVV7LT4_1,TCGGTCTG-TGGTTGGT,28087456,27707771,379685,0,0.0069,0.9865,0.0135,0.0000
8,tih_rna_sample_00755_B23MVV7LT4_1,CTAGACGA-GAGGATGG,49902951,49098102,804849,0,0.0123,0.9839,0.0161,0.0000
8,tih_rna_sample_00758_B23MVV7LT4_1,GTAATACT-CTCACGAA,45443090,43272917,2170173,0,0.0112,0.9522,0.0478,0.0000
8,tih_rna_sample_00760_B23MVV7LT4_1,GATTCTTA-TGCTAGCG,30787314,30340185,447129,0,0.0076,0.9855,0.0145,0.0000
8,tih_rna_sample_00761_B23MVV7LT4_1,TGTGATCG-AGACGAGT,9595887,9388899,206988,0,0.0024,0.9784,0.0216,0.0000
8,tih_rna_sample_00762_B23MVV7LT4_1,ATCGAGAG-TGGAAGCA,37288649,36721103,567546,0,0.0092,0.9848,0.0152,0.0000
8,tih_rna_sample_00763_B23MVV7LT4_1,CTGAACGT-GCCAATAC,37175069,36610975,564094,0,0.0091,0.9848,0.0152,0.0000
8,tih_rna_sample_00764_B23MVV7LT4_1,CACTAGAC-TGTGGATT,31433193,30968567,464626,0,0.0077,0.9852,0.0148,0.0000
8,tih_rna_sample_00766_B23MVV7LT4_1,CGTCGCCT-TATCTTCT,26064390,24787166,1277224,0,0.0064,0.9510,0.0490,0.0000
8,Undetermined,,243525848,243525848,0,0,0.0599,1.0000,0.0000,0.0000