Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
4,tih_rna_sample_00604_B23MVV7LT4_1,TAGCGAGG-TTGCTCAC,60285883,59434275,851608,0,0.0151,0.9859,0.0141,0.0000
4,tih_rna_sample_00612_B23MVV7LT4_1,CCAACTGT-GCGCTAGA,46477395,45567920,909475,0,0.0116,0.9804,0.0196,0.0000
4,tih_rna_sample_00613_B23MVV7LT4_1,GAGTAGTG-GCGATGCC,39452614,38852757,599857,0,0.0099,0.9848,0.0152,0.0000
4,tih_rna_sample_00614_B23MVV7LT4_1,CCAGTATT-ACGAAGCG,32188288,31691233,497055,0,0.0081,0.9846,0.0154,0.0000
4,tih_rna_sample_00616_B23MVV7LT4_1,ATCATACC-ATGTCGTA,42913024,42251570,661454,0,0.0107,0.9846,0.0154,0.0000
4,tih_rna_sample_00618_B23MVV7LT4_1,ATTCGCAC-TCTGTATG,49405256,48771895,633361,0,0.0124,0.9872,0.0128,0.0000
4,tih_rna_sample_00619_B23MVV7LT4_1,CTCTTCAG-TTGTCTCT,30749735,30283425,466310,0,0.0077,0.9848,0.0152,0.0000
4,tih_rna_sample_00622_B23MVV7LT4_1,CTGTATGC-TTCCGGCT,41108187,40570334,537853,0,0.0103,0.9869,0.0131,0.0000
4,tih_rna_sample_00624_B23MVV7LT4_1,TCTGACTA-TAACCAGA,28146842,27744960,401882,0,0.0070,0.9857,0.0143,0.0000
4,FFPE_HD789_01_RNA_13_B23MVV7LT4_1,TGTGACGT-GCAGCGTT,73375531,72194027,1181504,0,0.0184,0.9839,0.0161,0.0000
4,FFPE_V4_0002_RNA_0001_B23MVV7LT4_1,AGAAGATT-AGAAGGTA,25205885,24772488,433397,0,0.0063,0.9828,0.0172,0.0000
4,tih_rna_sample_00626_B23MVV7LT4_1,ATCCAGCA-AGAGCTCT,56430281,55372526,1057755,0,0.0141,0.9813,0.0187,0.0000
4,tih_rna_sample_00628_B23MVV7LT4_1,GCGCCATA-GAACCTCC,55180705,54205475,975230,0,0.0138,0.9823,0.0177,0.0000
4,tih_rna_sample_00629_B23MVV7LT4_1,CACTCGCA-GAACGCGA,47062608,46332336,730272,0,0.0118,0.9845,0.0155,0.0000
4,tih_rna_sample_00635_B23MVV7LT4_1,AAGGTCAA-GCATTATA,41397608,40758406,639202,0,0.0104,0.9846,0.0154,0.0000
4,tih_rna_sample_00636_B23MVV7LT4_1,GTGACGCA-CGTTGTTG,35259016,34689959,569057,0,0.0088,0.9839,0.0161,0.0000
4,tih_rna_sample_00637_B23MVV7LT4_1,TGTCAGGC-GATTCCTT,33104375,32636244,468131,0,0.0083,0.9859,0.0141,0.0000
4,tih_rna_sample_00638_B23MVV7LT4_1,CACGTGAT-TACAACGT,30583407,30081877,501530,0,0.0076,0.9836,0.0164,0.0000
4,tih_rna_sample_00639_B23MVV7LT4_1,CCATCACG-TCTCCTGG,42795002,41865141,929861,0,0.0107,0.9783,0.0217,0.0000
4,tih_rna_sample_00569_B23MVV7LT4_1,ACCAGGAA-AGCATGGC,50396606,49448471,948135,0,0.0126,0.9812,0.0188,0.0000
4,tih_rna_sample_00570_B23MVV7LT4_1,TAAGGCTC-GACGTTAC,41004307,40376655,627652,0,0.0103,0.9847,0.0153,0.0000
4,tih_rna_sample_00572_B23MVV7LT4_1,TGGCACTG-GCCATAGA,28248348,27804999,443349,0,0.0071,0.9843,0.0157,0.0000
4,tih_rna_sample_00574_B23MVV7LT4_1,CATATGGT-ACAGATCT,44868257,44180816,687441,0,0.0112,0.9847,0.0153,0.0000
4,tih_rna_sample_00575_B23MVV7LT4_1,GCACTACC-GAAGACTT,9705164,9479034,226130,0,0.0024,0.9767,0.0233,0.0000
4,tih_rna_sample_00576_B23MVV7LT4_1,GCATAAGA-GAGAACTG,24097885,23647846,450039,0,0.0060,0.9813,0.0187,0.0000
4,tih_rna_sample_00581_B23MVV7LT4_1,AAGGTGTA-AGCGCTAC,43311436,42569484,741952,0,0.0108,0.9829,0.0171,0.0000
4,tih_rna_sample_00582_B23MVV7LT4_1,CTTCTAAC-TGATCAGT,44988145,44307747,680398,0,0.0113,0.9849,0.0151,0.0000
4,tih_rna_sample_00583_B23MVV7LT4_1,TCGACCAG-GTTCGAAC,28957780,28509853,447927,0,0.0072,0.9845,0.0155,0.0000
4,tih_rna_sample_00584_B23MVV7LT4_1,GTGACACG-CTTACACT,4495479,4433719,61760,0,0.0011,0.9863,0.0137,0.0000
4,tih_rna_sample_00586_B23MVV7LT4_1,AATGGACG-AAGTGCAC,23018810,22600204,418606,0,0.0058,0.9818,0.0182,0.0000
4,tih_rna_sample_00588_B23MVV7LT4_1,TCTCCGTA-AGTTGTGA,43798256,43103239,695017,0,0.0110,0.9841,0.0159,0.0000
4,tih_rna_sample_00591_B23MVV7LT4_1,TGGAAGCA-TCCAACAC,38781272,38171906,609366,0,0.0097,0.9843,0.0157,0.0000
4,tih_rna_sample_00592_B23MVV7LT4_1,GATAGACA-GTGTTCAC,31673471,31188026,485445,0,0.0079,0.9847,0.0153,0.0000
4,tih_rna_sample_00594_B23MVV7LT4_1,AGCGTCTC-CCTAGGCG,59726980,56200445,3526535,0,0.0149,0.9410,0.0590,0.0000
4,tih_rna_sample_00596_B23MVV7LT4_1,CTCTATAC-CGTTCAAC,48244090,47223425,1020665,0,0.0121,0.9788,0.0212,0.0000
4,tih_rna_sample_00598_B23MVV7LT4_1,ATAGCCGG-TCTTATCC,22659229,22160937,498292,0,0.0057,0.9780,0.0220,0.0000
4,tih_rna_sample_00599_B23MVV7LT4_1,GTTCTCAT-CCTCCATT,35522510,35021262,501248,0,0.0089,0.9859,0.0141,0.0000
4,tih_rna_sample_00602_B23MVV7LT4_1,CAATGCGT-ATGTTCGC,59526411,58531761,994650,0,0.0149,0.9833,0.0167,0.0000
4,tih_rna_sample_00676_B23MVV7LT4_1,TGAGTGTA-ATTCGCCG,43384980,42531213,853767,0,0.0109,0.9803,0.0197,0.0000
4,tih_rna_sample_00677_B23MVV7LT4_1,TGCTTCCA-CAGATGTT,2609816,2566018,43798,0,0.0007,0.9832,0.0168,0.0000
4,tih_rna_sample_00678_B23MVV7LT4_1,CCTACTCT-TGCAATTG,19681227,19394044,287183,0,0.0049,0.9854,0.0146,0.0000
4,tih_rna_sample_00679_B23MVV7LT4_1,TCGCTGAG-AATGCTCT,6553478,6400225,153253,0,0.0016,0.9766,0.0234,0.0000
4,tih_rna_sample_00680_B23MVV7LT4_1,CGCTAATT-CCATCGCA,49543322,48772927,770395,0,0.0124,0.9845,0.0155,0.0000
4,tih_rna_sample_00681_B23MVV7LT4_1,TCAGCTGT-ACAGCTCC,57138610,56132327,1006283,0,0.0143,0.9824,0.0176,0.0000
4,tih_rna_sample_00685_B23MVV7LT4_1,AGACGACA-GAGCTGGA,17228475,16858731,369744,0,0.0043,0.9785,0.0215,0.0000
4,tih_rna_sample_00686_B23MVV7LT4_1,TAGGTCCA-TGCTCATC,40751356,38916818,1834538,0,0.0102,0.9550,0.0450,0.0000
4,tih_rna_sample_00690_B23MVV7LT4_1,TAACCTGA-TCAATTGA,26726867,26347320,379547,0,0.0067,0.9858,0.0142,0.0000
4,tih_rna_sample_00691_B23MVV7LT4_1,GATAGGTG-AGACGCAA,31171875,30437800,734075,0,0.0078,0.9765,0.0235,0.0000
4,tih_rna_sample_00692_B23MVV7LT4_1,CTTGTTAC-AATTCGGT,30396705,29942337,454368,0,0.0076,0.9851,0.0149,0.0000
4,tih_rna_sample_00693_B23MVV7LT4_1,TCACCGTG-TCGCTCTG,58445807,57489712,956095,0,0.0146,0.9836,0.0164,0.0000
4,tih_rna_sample_00694_B23MVV7LT4_1,CAACTACC-ATGCTGCA,31632218,31112893,519325,0,0.0079,0.9836,0.0164,0.0000
4,tih_rna_sample_00699_B23MVV7LT4_1,ACTCGTCC-TGGTCCTC,62862263,61842941,1019322,0,0.0157,0.9838,0.0162,0.0000
4,tih_rna_sample_00701_B23MVV7LT4_1,TCCGGAGA-ATTCCTCT,55488982,54515252,973730,0,0.0139,0.9825,0.0175,0.0000
4,tih_rna_sample_00703_B23MVV7LT4_1,TTGTGAGA-TTCACTGG,18472128,18190532,281596,0,0.0046,0.9848,0.0152,0.0000
4,tih_rna_sample_00704_B23MVV7LT4_1,CCGAAGGT-TCTATCTG,63907852,63074320,833532,0,0.0160,0.9870,0.0130,0.0000
4,tih_rna_sample_00709_B23MVV7LT4_1,ATACACAC-AGTGTGAT,31526603,31014900,511703,0,0.0079,0.9838,0.0162,0.0000
4,tih_rna_sample_00641_B23MVV7LT4_1,AGCCTCTG-TTCGCCTT,55680342,54036220,1644122,0,0.0139,0.9705,0.0295,0.0000
4,tih_rna_sample_00643_B23MVV7LT4_1,CGGATCAT-CCGTAACC,27445029,26900931,544098,0,0.0069,0.9802,0.0198,0.0000
4,tih_rna_sample_00644_B23MVV7LT4_1,CTCTCTCT-ACTTGATT,41789740,40983920,805820,0,0.0105,0.9807,0.0193,0.0000
4,tih_rna_sample_00649_B23MVV7LT4_1,AAGGCTCC-TGAAGATG,63447977,62533419,914558,0,0.0159,0.9856,0.0144,0.0000
4,tih_rna_sample_00650_B23MVV7LT4_1,GATAGATC-CGTACGCC,46749039,45945003,804036,0,0.0117,0.9828,0.0172,0.0000
4,tih_rna_sample_00652_B23MVV7LT4_1,GCAGAAGT-CTGCGTCG,41276693,40665663,611030,0,0.0103,0.9852,0.0148,0.0000
4,tih_rna_sample_00654_B23MVV7LT4_1,TATACGAT-CTCCTAAT,47742516,46788954,953562,0,0.0119,0.9800,0.0200,0.0000
4,tih_rna_sample_00658_B23MVV7LT4_1,AACGCTCT-GAGTAACG,29085136,28616009,469127,0,0.0073,0.9839,0.0161,0.0000
4,tih_rna_sample_00660_B23MVV7LT4_1,GATTGGCG-CTGTCTCA,31962517,31269490,693027,0,0.0080,0.9783,0.0217,0.0000
4,tih_rna_sample_00664_B23MVV7LT4_1,CAAGACGG-GTACTCCG,33781355,33265865,515490,0,0.0084,0.9847,0.0153,0.0000
4,tih_rna_sample_00665_B23MVV7LT4_1,CCACTCAA-CCTGTCTA,53232497,52238384,994113,0,0.0133,0.9813,0.0187,0.0000
4,tih_rna_sample_00666_B23MVV7LT4_1,AGCCACTC-CCAAGAGG,29065485,25624067,3441418,0,0.0073,0.8816,0.1184,0.0000
4,tih_rna_sample_00667_B23MVV7LT4_1,GCGAAGAA-TCACGGAT,16640849,16355241,285608,0,0.0042,0.9828,0.0172,0.0000
4,tih_rna_sample_00668_B23MVV7LT4_1,TGTCGGTG-AGTTCTTC,74963228,73820081,1143147,0,0.0188,0.9848,0.0152,0.0000
4,tih_rna_sample_00669_B23MVV7LT4_1,TCTACAGC-AATGGAAG,34612576,34066619,545957,0,0.0087,0.9842,0.0158,0.0000
4,tih_rna_sample_00671_B23MVV7LT4_1,CAACCATG-ATAAGGTG,47582605,46888182,694423,0,0.0119,0.9854,0.0146,0.0000
4,tih_rna_sample_00673_B23MVV7LT4_1,CGCACATT-TGGAACGT,40587776,40000932,586844,0,0.0102,0.9855,0.0145,0.0000
4,tih_rna_sample_00711_B23MVV7LT4_1,ATCTAACC-CCTGTGGT,70944631,69610269,1334362,0,0.0177,0.9812,0.0188,0.0000
4,tih_rna_sample_00714_B23MVV7LT4_1,GCGACAAT-ATTCGTAC,55181572,54297878,883694,0,0.0138,0.9840,0.0160,0.0000
4,tih_rna_sample_00721_B23MVV7LT4_1,TTGCCGTA-ACATTAGC,58619768,57636257,983511,0,0.0147,0.9832,0.0168,0.0000
4,tih_rna_sample_00722_B23MVV7LT4_1,GATCCACT-GTGTTCTG,15154590,14926990,227600,0,0.0038,0.9850,0.0150,0.0000
4,tih_rna_sample_00723_B23MVV7LT4_1,TCCGAGAT-TGTCACCT,5819319,5527344,291975,0,0.0015,0.9498,0.0502,0.0000
4,tih_rna_sample_00725_B23MVV7LT4_1,ATAGAGTT-GCATAACG,49124131,48284832,839299,0,0.0123,0.9829,0.0171,0.0000
4,tih_rna_sample_00729_B23MVV7LT4_1,GCATTCCT-GAGCCTGC,44404423,35942369,8462054,0,0.0111,0.8094,0.1906,0.0000
4,tih_rna_sample_00730_B23MVV7LT4_1,AATCGTGC-GTTCAGTA,55151635,54292049,859586,0,0.0138,0.9844,0.0156,0.0000
4,tih_rna_sample_00731_B23MVV7LT4_1,TACCGGAG-CTTAGCAG,43545201,42890054,655147,0,0.0109,0.9850,0.0150,0.0000
4,tih_rna_sample_00736_B23MVV7LT4_1,AGCACCAG-CTCGTGTA,42812982,41927497,885485,0,0.0107,0.9793,0.0207,0.0000
4,tih_rna_sample_00737_B23MVV7LT4_1,TACCTAGA-GCATTCGA,35495916,34785263,710653,0,0.0089,0.9800,0.0200,0.0000
4,tih_rna_sample_00739_B23MVV7LT4_1,CAGACTGC-ACCGGCCT,67524862,64852284,2672578,0,0.0169,0.9604,0.0396,0.0000
4,tih_rna_sample_00740_B23MVV7LT4_1,GTTAGTGC-CTGCATAG,46651503,46010768,640735,0,0.0117,0.9863,0.0137,0.0000
4,tih_rna_sample_00742_B23MVV7LT4_1,CGCAATAA-CCTACAGC,21277197,20868568,408629,0,0.0053,0.9808,0.0192,0.0000
4,tih_rna_sample_00754_B23MVV7LT4_1,TCGGTCTG-TGGTTGGT,27636111,27270885,365226,0,0.0069,0.9868,0.0132,0.0000
4,tih_rna_sample_00755_B23MVV7LT4_1,CTAGACGA-GAGGATGG,49067004,48283038,783966,0,0.0123,0.9840,0.0160,0.0000
4,tih_rna_sample_00758_B23MVV7LT4_1,GTAATACT-CTCACGAA,44193455,41922046,2271409,0,0.0111,0.9486,0.0514,0.0000
4,tih_rna_sample_00760_B23MVV7LT4_1,GATTCTTA-TGCTAGCG,30391240,29953425,437815,0,0.0076,0.9856,0.0144,0.0000
4,tih_rna_sample_00761_B23MVV7LT4_1,TGTGATCG-AGACGAGT,9431513,9228490,203023,0,0.0024,0.9785,0.0215,0.0000
4,tih_rna_sample_00762_B23MVV7LT4_1,ATCGAGAG-TGGAAGCA,36872063,36318910,553153,0,0.0092,0.9850,0.0150,0.0000
4,tih_rna_sample_00763_B23MVV7LT4_1,CTGAACGT-GCCAATAC,36940337,36386244,554093,0,0.0092,0.9850,0.0150,0.0000
4,tih_rna_sample_00764_B23MVV7LT4_1,CACTAGAC-TGTGGATT,31110011,30655064,454947,0,0.0078,0.9854,0.0146,0.0000
4,tih_rna_sample_00766_B23MVV7LT4_1,CGTCGCCT-TATCTTCT,25837981,24546943,1291038,0,0.0065,0.9500,0.0500,0.0000
4,Undetermined,,237495583,237495583,0,0,0.0594,1.0000,0.0000,0.0000