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tih_rna_sample_00730_B23MVV7LT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0017/B23MVV7LT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/tih_rna_sample_00730_B23MVV7LT4_1.FusionInspector.fusions.abridged.tsv
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12.3 KB
Workflow Run
dev_rna_exp0017-73d51683
Published
Jun 08, 2026 4:55 AM

Content

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
PTPRK--RSPO3 371 2 371.00 2.00 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 55391 chr6:127148648:+ ONLY_REF_SPLICE YES 1501 60 0.25 6.13 GT 1.8892 AG 1.9329 1.2608 1100 0
PTPRK--RSPO3 1 0 1.00 0.00 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 56583 chr6:127150426:+ ONLY_REF_SPLICE YES 1501 164 0.00 0.01 GT 1.8892 AG 1.9219 0.0034 125 0
AFDN--AC139491.3 222 5 222.00 3.02 AFDN^ENSG00000130396.20 25737 chr6:167925091:+ AC139491.3^ENSG00000250992.2 48709 chr5:176040687:+ ONLY_REF_SPLICE YES 911 18 0.25 12.00 GT 1.9329 AG 1.9656 0.7605 1269 0
AFDN--AC139491.3 138 12 138.00 8.98 AFDN^ENSG00000130396.20 25737 chr6:167925091:+ AC139491.3^ENSG00000250992.2 48329 chr5:176040307:+ ONLY_REF_SPLICE YES 911 0 0.17 151.00 GT 1.9329 AG 1.7465 0.4968 1345 0
UBE2Q2P2--GOLGA6L10 221 1 213.07 1.00 UBE2Q2P2^ENSG00000259429.5 12683 chr15:82420075:+ GOLGA6L10^ENSG00000278662.5 16868 chr15:82347629:- ONLY_REF_SPLICE YES 0 25 223.00 8.58 GT 1.8323 AG 1.7819 0.7236 1209 0
TVP23C--CDRT4 159 1 159.00 1.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 134 8 1.19 17.89 GT 1.9329 AG 1.9899 0.5408 1215 0
TVP23C--CDRT4 72 0 72.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 134 42 0.54 1.70 GT 1.9329 AG 1.6402 0.2434 137 0
TVP23C--CDRT4 5 0 5.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 7 8 0.75 0.67 GT 1.8892 AG 1.9899 0.0169 1949 0
TVP23C--CDRT4 3 0 3.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 153 42 0.03 0.09 GT 1.8323 AG 1.6402 0.0101 1363 0
TVP23C--CDRT4 3 0 3.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 153 8 0.03 0.44 GT 1.8323 AG 1.9899 0.0101 2126 0
TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 223 8 0.01 0.33 GT 1.9086 AG 1.9899 0.0068 1774 0
TVP23C--CDRT4 1 0 1.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 223 42 0.01 0.05 GT 1.9086 AG 1.6402 0.0034 697 0
TVP23C--CDRT4 1 0 1.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 21051 chr17:15453085:- ONLY_REF_SPLICE YES 153 1 0.01 1.00 GT 1.8323 AG 1.8892 0.0034 1044 0
SLC16A5--JPT1 155 3 155.00 2.98 SLC16A5^ENSG00000170190.16 2578 chr17:75089304:+ JPT1^ENSG00000189159.16 21223 chr17:75136250:- ONLY_REF_SPLICE YES 884 939 0.18 0.17 GT 1.8256 AG 1.7968 0.534 123 0
SLC16A5--JPT1 1 3 1.00 0.02 SLC16A5^ENSG00000170190.16 3606 chr17:75090332:+ JPT1^ENSG00000189159.16 21223 chr17:75136250:- ONLY_REF_SPLICE YES 921 939 0.01 0.01 GT 1.9656 AG 1.7968 0.0035 1148 0
AC004923.1--AC127526.2 142 0 142.00 0.00 AC004923.1^ENSG00000254610.3 1321 chr11:67955482:- AC127526.2^ENSG00000255367.3 9938 chr11:3508396:- ONLY_REF_SPLICE YES 166 0 0.86 143.00 GT 1.4566 AG 1.7819 0.4799 10000 0
AC004923.1--AC127526.2 19 0 19.00 0.00 AC004923.1^ENSG00000254610.3 1321 chr11:67955482:- AC127526.2^ENSG00000255367.3 8830 chr11:3515198:- ONLY_REF_SPLICE YES 166 0 0.12 20.00 GT 1.4566 AG 1.8892 0.0642 10000 0
ADAM9--ADAM2 120 0 120.00 0.00 ADAM9^ENSG00000168615.13 22956 chr8:39055772:+ ADAM2^ENSG00000104755.15 43090 chr8:39837212:- ONLY_REF_SPLICE YES 631 143 0.19 0.84 GT 1.8892 AG 1.6402 0.4056 2344 0
ADAM9--ADAM2 10 2 10.00 2.00 ADAM9^ENSG00000168615.13 22956 chr8:39055772:+ ADAM2^ENSG00000104755.15 41907 chr8:39838395:- INCL_NON_REF_SPLICE YES 631 0 0.02 13.00 GT 1.8892 AG 1.9656 0.0406 2932 0
ADAM9--ADAM2 7 0 7.00 0.00 ADAM9^ENSG00000168615.13 22956 chr8:39055772:+ ADAM2^ENSG00000104755.15 45223 chr8:39824897:- ONLY_REF_SPLICE YES 631 40 0.01 0.20 GT 1.8892 AG 1.5850 0.0237 992 0
ADAM9--ADAM2 4 0 4.00 0.00 ADAM9^ENSG00000168615.13 22956 chr8:39055772:+ ADAM2^ENSG00000104755.15 49154 chr8:39809466:- ONLY_REF_SPLICE YES 631 39 0.01 0.12 GT 1.8892 AG 1.9329 0.0135 1855 0
ADAM9--ADAM2 1 0 1.00 0.00 ADAM9^ENSG00000168615.13 22956 chr8:39055772:+ ADAM2^ENSG00000104755.15 55128 chr8:39769575:- ONLY_REF_SPLICE YES 631 70 0.00 0.03 GT 1.8892 AG 1.7968 0.0034 2704 0
ADAM9--ADAM2 1 0 1.00 0.00 ADAM9^ENSG00000168615.13 22956 chr8:39055772:+ ADAM2^ENSG00000104755.15 44167 chr8:39833999:- ONLY_REF_SPLICE YES 631 99 0.00 0.02 GT 1.8892 AG 1.8062 0.0034 1442 0
PCDHA4--PCDHAC1 118 1 59.00 0.50 PCDHA4^ENSG00000204967.12 3644 chr5:140809572:+ PCDHAC1^ENSG00000248383.5 19813 chr5:140978949:+ ONLY_REF_SPLICE YES 85 4 1.40 24.00 GT 1.9656 AG 1.3996 0.2011 1304 0
PCDHA4--PCDHAC2 118 1 59.00 0.50 PCDHA4^ENSG00000204967.12 3644 chr5:140809572:+ PCDHAC2^ENSG00000243232.6 18677 chr5:140978949:+ ONLY_REF_SPLICE YES 85 9 1.40 12.00 GT 1.9656 AG 1.3996 0.2011 1213 0
AP006294.2--ENPP7P3 113 0 113.00 0.00 AP006294.2^ENSG00000284639.1 1209 chr11:3580927:- ENPP7P3^ENSG00000248618.1 4297 chr3:130167943:- INCL_NON_REF_SPLICE YES 0 0 114.00 114.00 GT 1.4566 AG 1.7819 0.3819 10000 0
TLK2--AC240565.1 104 0 98.39 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 304 68 0.34 1.52 GT 1.8892 AG 1.8892 0.3326 1734 0
AC026150.1--GOLGA6L10 102 0 20.93 0.00 AC026150.1^ENSG00000260693.1 2543 chr15:30544660:+ GOLGA6L10^ENSG00000278662.5 7886 chr15:82347629:- ONLY_REF_SPLICE YES 4 24 20.60 4.12 GT 1.8323 AG 1.7819 0.0707 1572 0
STX16--NPEPL1 100 1 100.00 1.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 687 224 0.15 0.45 GT 1.7968 AG 1.8256 0.3414 1940 0
STX16--NPEPL1 2 0 2.00 0.00 STX16^ENSG00000124222.22 7774 chr20:58671297:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 964 224 0.00 0.01 GT 1.8062 AG 1.8256 0.0068 2729 0
STX16--NPEPL1 2 0 2.00 0.00 STX16^ENSG00000124222.22 1835 chr20:58652087:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 2003 224 0.00 0.01 GT 1.9899 AG 1.8256 0.0068 1258 0
PMS2P6--CCDC146 94 4 94.00 2.33 PMS2P6^ENSG00000174384.9 3690 chr7:73097567:+ CCDC146^ENSG00000135205.15 10176 chr7:77167658:+ ONLY_REF_SPLICE YES 99 6 0.99 14.14 GT 1.4566 AG 1.7465 0.3256 6786 0
PMS2P6--CCDC146 61 6 61.00 3.36 PMS2P6^ENSG00000174384.9 4779 chr7:73100706:+ CCDC146^ENSG00000135205.15 10176 chr7:77167658:+ ONLY_REF_SPLICE YES 28 6 2.34 9.71 GT 1.8323 AG 1.7465 0.2176 7283 0
PMS2P6--CCDC146 14 2 14.00 0.26 PMS2P6^ENSG00000174384.9 4779 chr7:73100706:+ CCDC146^ENSG00000135205.15 11343 chr7:77236947:+ ONLY_REF_SPLICE YES 28 91 0.59 0.18 GT 1.8323 AG 1.9329 0.0482 6311 0
PMS2P6--CCDC146 5 1 5.00 0.03 PMS2P6^ENSG00000174384.9 3690 chr7:73097567:+ CCDC146^ENSG00000135205.15 11343 chr7:77236947:+ ONLY_REF_SPLICE YES 99 91 0.07 0.08 GT 1.4566 AG 1.9329 0.017 5731 0
PMS2P6--CCDC146 1 1 1.00 0.01 PMS2P6^ENSG00000174384.9 4779 chr7:73100706:+ CCDC146^ENSG00000135205.15 14166 chr7:77254506:+ ONLY_REF_SPLICE NO 28 36 0.10 0.08 GT 1.8323 AG 1.5546 0.0034 4376 0
PMS2P6--CCDC146 1 1 1.00 0.01 PMS2P6^ENSG00000174384.9 4779 chr7:73100706:+ CCDC146^ENSG00000135205.15 12426 chr7:77241691:+ ONLY_REF_SPLICE YES 28 82 0.10 0.04 GT 1.8323 AG 1.7465 0.0034 5479 0
PMS2P6--CCDC146 1 0 1.00 0.00 PMS2P6^ENSG00000174384.9 3690 chr7:73097567:+ CCDC146^ENSG00000135205.15 12426 chr7:77241691:+ ONLY_REF_SPLICE YES 99 82 0.02 0.02 GT 1.4566 AG 1.7465 0.0034 4799 0
TLK2P1--AC110079.1 82 0 74.61 0.00 TLK2P1^ENSG00000226049.3 1830 chr17:34039043:- AC110079.1^ENSG00000260404.3 8316 chr4:118595912:+ INCL_NON_REF_SPLICE YES 34 112 2.37 0.73 GT 1.7465 AG 1.8892 0.2522 311 0
CRYZL2P--SEC16B 51 0 51.00 0.00 CRYZL2P^ENSG00000242193.11 8825 chr1:178026155:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 0 30 52.00 1.68 GT 1.9086 AG 1.5546 0.1724 2589 0
CRYZL2P--SEC16B 2 1 2.00 1.00 CRYZL2P^ENSG00000242193.11 11220 chr1:178022440:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 2 30 1.33 0.13 GT 1.9656 AG 1.5546 0.0102 2635 0
CRYZL2P--SEC16B 2 0 2.00 0.00 CRYZL2P^ENSG00000242193.11 1257 chr1:178037694:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 2 30 1.00 0.10 GT 1.8323 AG 1.5546 0.0068 510 0
CRYZL2P--SEC16B 2 0 2.00 0.00 CRYZL2P^ENSG00000242193.11 4246 chr1:178034705:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 0 30 3.00 0.10 GT 1.6895 AG 1.5546 0.0068 1888 0
HIVEP1--SEMA3E 49 0 49.00 0.00 HIVEP1^ENSG00000095951.17 8792 chr6:12089237:+ SEMA3E^ENSG00000170381.14 33473 chr7:83466601:- ONLY_REF_SPLICE YES 99 51 0.50 0.96 GT 1.5546 AG 1.8256 0.1656 2568 0
HIVEP1--SEMA3E 1 0 1.00 0.00 HIVEP1^ENSG00000095951.17 4047 chr6:12015668:+ SEMA3E^ENSG00000170381.14 36800 chr7:83408487:- ONLY_REF_SPLICE YES 159 96 0.01 0.02 GT 1.8295 AG 1.5058 0.0034 3756 0
NFATC3--SCN11A 45 1 45.00 1.00 NFATC3^ENSG00000072736.19 7848 chr16:68126610:+ SCN11A^ENSG00000168356.13 48851 chr3:38921255:- ONLY_REF_SPLICE YES 167 62 0.28 0.75 GT 1.9656 AG 1.9656 0.1555 1676 0
NFATC3--SCN11A 9 0 9.00 0.00 NFATC3^ENSG00000072736.19 7848 chr16:68126610:+ SCN11A^ENSG00000168356.13 50031 chr3:38920001:- ONLY_REF_SPLICE YES 167 81 0.06 0.12 GT 1.9656 AG 1.9086 0.0304 2575 0
NFATC3--SCN11A 3 0 3.00 0.00 NFATC3^ENSG00000072736.19 7848 chr16:68126610:+ SCN11A^ENSG00000168356.13 52111 chr3:38909194:- ONLY_REF_SPLICE YES 167 123 0.02 0.03 GT 1.9656 AG 1.8892 0.0101 2551 0
NFATC3--SCN11A 1 0 1.00 0.00 NFATC3^ENSG00000072736.19 2034 chr16:68085784:+ SCN11A^ENSG00000168356.13 48851 chr3:38921255:- ONLY_REF_SPLICE YES 488 62 0.00 0.03 GT 1.7056 AG 1.9656 0.0034 2495 0
NFATC3--SCN11A 1 0 1.00 0.00 NFATC3^ENSG00000072736.19 7848 chr16:68126610:+ SCN11A^ENSG00000168356.13 53183 chr3:38908122:- ONLY_REF_SPLICE YES 167 127 0.01 0.02 GT 1.9656 AG 1.8256 0.0034 1679 0
BRD7--COL4A6 44 0 44.00 0.00 BRD7^ENSG00000166164.16 7695 chr16:50339976:- COL4A6^ENSG00000197565.16 28741 chrX:108310828:- ONLY_REF_SPLICE YES 180 11 0.25 3.75 GT 1.8892 AG 1.8256 0.1487 2076 0
JPT1--SLC16A5 31 3 31.00 3.00 JPT1^ENSG00000189159.16 7339 chr17:75146666:- SLC16A5^ENSG00000170190.16 16251 chr17:75093589:+ ONLY_REF_SPLICE YES 852 1326 0.04 0.03 GT 1.8256 AG 1.9329 0.1149 1153 0
STON1--GTF2A1L 30 3 30.00 2.25 STON1^ENSG00000243244.7 7715 chr2:48591855:+ GTF2A1L^ENSG00000242441.8 16320 chr2:48620851:+ ONLY_REF_SPLICE YES 136 1 0.25 17.00 GT 1.9086 AG 1.7819 0.109 2355 0
STON1--GTF2A1L 24 1 24.00 0.37 STON1^ENSG00000243244.7 7715 chr2:48591855:+ GTF2A1L^ENSG00000242441.8 16636 chr2:48621167:+ ONLY_REF_SPLICE YES 136 25 0.19 1.00 GT 1.9086 AG 1.9329 0.0824 2369 0
STON1--GTF2A1L 23 0 23.00 0.00 STON1^ENSG00000243244.7 6512 chr2:48582563:+ GTF2A1L^ENSG00000242441.8 16636 chr2:48621167:+ ONLY_REF_SPLICE YES 104 25 0.23 0.92 GT 1.5546 AG 1.9329 0.0777 1187 0
STON1--GTF2A1L 5 1 5.00 0.08 STON1^ENSG00000243244.7 10867 chr2:48597379:+ GTF2A1L^ENSG00000242441.8 16636 chr2:48621167:+ INCL_NON_REF_SPLICE YES 0 25 7.00 0.27 GT 1.9899 AG 1.9329 0.0172 829 0
STON1--GTF2A1L 4 3 4.00 0.30 STON1^ENSG00000243244.7 10867 chr2:48597379:+ GTF2A1L^ENSG00000242441.8 16320 chr2:48620851:+ INCL_NON_REF_SPLICE YES 0 1 8.00 4.00 GT 1.9899 AG 1.7819 0.0145 789 0
STON1--GTF2A1L 1 0 1.00 0.00 STON1^ENSG00000243244.7 2447 chr2:48530829:+ GTF2A1L^ENSG00000242441.8 16636 chr2:48621167:+ ONLY_REF_SPLICE YES 106 25 0.02 0.08 GT 1.9086 AG 1.9329 0.0034 1744 0
AP006294.2--LINC00665 30 0 30.00 0.00 AP006294.2^ENSG00000284639.1 1209 chr11:3580927:- LINC00665^ENSG00000232677.9 6550 chr19:36329430:- INCL_NON_REF_SPLICE YES 0 0 31.00 31.00 GT 1.4566 AG 1.8892 0.1014 2156 0
GOLGA6L10--GOLGA2P6 28 0 28.00 0.00 GOLGA6L10^ENSG00000278662.5 2304 chr15:82347510:- GOLGA2P6^ENSG00000241621.1 14390 chr10:30370881:- INCL_NON_REF_SPLICE YES 117 0 0.25 29.00 GT 1.9656 AG 1.7465 0.0946 43 3
CASK--CD86 15 0 15.00 0.00 CASK^ENSG00000147044.23 16288 chrX:41626604:- CD86^ENSG00000114013.16 56982 chr3:122091601:+ ONLY_REF_SPLICE YES 392 49 0.04 0.32 GT 1.6729 AG 1.9656 0.0507 1250 0
CASK--CD86 7 0 7.00 0.00 CASK^ENSG00000147044.23 16288 chrX:41626604:- CD86^ENSG00000114013.16 58544 chr3:122103512:+ ONLY_REF_SPLICE YES 392 67 0.02 0.12 GT 1.6729 AG 1.8256 0.0237 1623 0
63 rows