#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
CCNL2--LINC01837	1425	0	1425.00	0.00	CCNL2^ENSG00000221978.12	10548	chr1:1387369:-	LINC01837^ENSG00000267489.5	15317	chr19:32072003:-	INCL_NON_REF_SPLICE	YES	2320	0	0.61	1426.00	CG	1.7465	TA	1.9086	5.6231	234	0
CCNL2--LINC01837	3	0	3.00	0.00	CCNL2^ENSG00000221978.12	10360	chr1:1387557:-	LINC01837^ENSG00000267489.5	15393	chr19:32071927:-	INCL_NON_REF_SPLICE	YES	3090	2	0.00	1.33	GT	1.8892	AG	1.7819	0.0118	434	0
CCNL2--LINC01837	3	0	3.00	0.00	CCNL2^ENSG00000221978.12	10477	chr1:1387440:-	LINC01837^ENSG00000267489.5	15393	chr19:32071927:-	INCL_NON_REF_SPLICE	YES	2826	2	0.00	1.33	GC	1.9086	AG	1.7819	0.0118	323	0
CCNL2--LINC01837	2	0	2.00	0.00	CCNL2^ENSG00000221978.12	10140	chr1:1387777:-	LINC01837^ENSG00000267489.5	15393	chr19:32071927:-	ONLY_REF_SPLICE	YES	2832	2	0.00	1.00	GT	1.9656	AG	1.7819	0.0079	649	0
AKAP10--RB1	392	3	392.00	3.00	AKAP10^ENSG00000108599.15	17156	chr17:19909181:-	RB1^ENSG00000139687.16	26721	chr13:48342599:+	ONLY_REF_SPLICE	YES	218	90	1.81	4.35	GT	1.7232	AG	1.8256	1.5586	2542	0
RRAS2--COPB1	363	4	363.00	4.00	RRAS2^ENSG00000133818.14	11185	chr11:14294471:-	COPB1^ENSG00000129083.13	23210	chr11:14488584:-	ONLY_REF_SPLICE	YES	1318	610	0.28	0.60	GT	1.8295	AG	1.9086	1.4482	2323	0
RRAS2--COPB1	1	0	1.00	0.00	RRAS2^ENSG00000133818.14	9888	chr11:14295768:-	COPB1^ENSG00000129083.13	23210	chr11:14488584:-	ONLY_REF_SPLICE	YES	1038	610	0.00	0.00	GT	1.9329	AG	1.9086	0.0039	2462	0
RRAS2--COPB1	1	0	1.00	0.00	RRAS2^ENSG00000133818.14	2537	chr11:14358763:-	COPB1^ENSG00000129083.13	23210	chr11:14488584:-	ONLY_REF_SPLICE	YES	1023	610	0.00	0.00	GT	1.9329	AG	1.9086	0.0039	1330	0
LSM14A--ZNF460	321	1	321.00	0.96	LSM14A^ENSG00000257103.9	4233	chr19:34196763:+	ZNF460^ENSG00000197714.9	20293	chr19:57284551:+	ONLY_REF_SPLICE	YES	783	916	0.41	0.35	GT	1.2867	AG	1.9329	1.2705	3607	0
LSM14A--ZNF460	36	0	36.00	0.00	LSM14A^ENSG00000257103.9	2424	chr19:34194641:+	ZNF460^ENSG00000197714.9	20293	chr19:57284551:+	ONLY_REF_SPLICE	YES	633	916	0.06	0.04	GT	1.9656	AG	1.9329	0.1421	2464	0
LSM14A--ZNF460	13	0	13.00	0.00	LSM14A^ENSG00000257103.9	4233	chr19:34196763:+	ZNF460^ENSG00000197714.9	21420	chr19:57290699:+	ONLY_REF_SPLICE	YES	783	1684	0.02	0.01	GT	1.2867	AG	1.7465	0.0513	2832	0
LSM14A--ZNF460	12	1	12.00	0.04	LSM14A^ENSG00000257103.9	4233	chr19:34196763:+	ZNF460^ENSG00000197714.9	17447	chr19:57280072:+	INCL_NON_REF_SPLICE	YES	783	24	0.02	0.56	GT	1.2867	AG	1.7465	0.0476	3183	0
LSM14A--ZNF460	1	0	1.00	0.00	LSM14A^ENSG00000257103.9	1260	chr19:34172763:+	ZNF460^ENSG00000197714.9	20293	chr19:57284551:+	ONLY_REF_SPLICE	YES	609	916	0.00	0.00	GT	1.9656	AG	1.9329	0.0039	2104	0
PCDHGA2--PCDHGA9	229	0	38.17	0.00	PCDHGA2^ENSG00000081853.15	3636	chr5:141341395:+	PCDHGA9^ENSG00000261934.2	12112	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	4	230.00	46.00	GT	1.9656	AG	1.3383	0.1506	1151	0
PCDHGA2--PCDHGB6	229	0	38.17	0.00	PCDHGA2^ENSG00000081853.15	3636	chr5:141341395:+	PCDHGB6^ENSG00000253305.2	14145	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	13	230.00	16.43	GT	1.9656	AG	1.3383	0.1506	1399	0
PCDHGA2--PCDHGB7	229	0	38.17	0.00	PCDHGA2^ENSG00000081853.15	3636	chr5:141341395:+	PCDHGB7^ENSG00000254122.3	12329	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	46	230.00	4.89	GT	1.9656	AG	1.3383	0.1506	1503	0
PCDHGA2--PCDHGC3	229	0	38.17	0.00	PCDHGA2^ENSG00000081853.15	3636	chr5:141341395:+	PCDHGC3^ENSG00000240184.7	12393	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	393	230.00	0.58	GT	1.9656	AG	1.3383	0.1506	2186	0
PCDHGA2--PCDHGC4	229	0	38.17	0.00	PCDHGA2^ENSG00000081853.15	3636	chr5:141341395:+	PCDHGC4^ENSG00000242419.5	12337	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	0	230.00	230.00	GT	1.9656	AG	1.3383	0.1506	1439	0
PCDHGA2--PCDHGC5	229	0	38.17	0.00	PCDHGA2^ENSG00000081853.15	3636	chr5:141341395:+	PCDHGC5^ENSG00000240764.4	12393	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	8	230.00	25.56	GT	1.9656	AG	1.3383	0.1506	1075	0
FBXO25--AC240565.1	196	0	196.00	0.00	FBXO25^ENSG00000147364.17	7247	chr8:435707:+	AC240565.1^ENSG00000280136.2	27298	chr17:106864:-	ONLY_REF_SPLICE	YES	63	33	3.08	5.79	GT	1.7819	AG	1.8892	0.7734	7162	0
ANKRD27--ZNF507	98	0	98.00	0.00	ANKRD27^ENSG00000105186.16	11413	chr19:32639356:-	ZNF507^ENSG00000168813.17	46355	chr19:32382467:+	ONLY_REF_SPLICE	YES	299	264	0.33	0.37	GT	1.7465	AG	1.7819	0.3867	308	0
KLRC4--KLRK1	93	0	93.00	0.00	KLRC4^ENSG00000183542.5	3122	chr12:10407636:-	KLRK1^ENSG00000213809.9	8583	chr12:10388875:-	INCL_NON_REF_SPLICE	YES	35	110	2.61	0.85	GT	1.3996	AG	1.9219	0.367	1207	0
KLRC4--KLRK1	6	0	6.00	0.00	KLRC4^ENSG00000183542.5	3122	chr12:10407636:-	KLRK1^ENSG00000213809.9	6360	chr12:10391891:-	INCL_NON_REF_SPLICE	YES	35	0	0.19	7.00	GT	1.3996	AG	1.6895	0.0237	3430	0
KLRC4--KLRK1	3	0	3.00	0.00	KLRC4^ENSG00000183542.5	3122	chr12:10407636:-	KLRK1^ENSG00000213809.9	7431	chr12:10390027:-	INCL_NON_REF_SPLICE	YES	35	11	0.11	0.33	GT	1.3996	AG	1.8323	0.0118	2359	0
GPATCH2--LRRC7	87	0	87.00	0.00	GPATCH2^ENSG00000092978.11	2892	chr1:217619783:-	LRRC7^ENSG00000033122.21	24928	chr1:69678381:+	ONLY_REF_SPLICE	YES	117	5	0.75	14.67	GT	1.9086	AG	1.8892	0.3433	3999	0
GPATCH2--LRRC7	4	0	4.00	0.00	GPATCH2^ENSG00000092978.11	2852	chr1:217619823:-	LRRC7^ENSG00000033122.21	27188	chr1:69760260:+	INCL_NON_REF_SPLICE	YES	101	91	0.05	0.05	GT	1.6402	AG	1.6402	0.0158	2418	0
AOPEP--AL450426.1	69	0	69.00	0.00	AOPEP^ENSG00000148120.17	23886	chr9:95005616:+	AL450426.1^ENSG00000283001.2	42488	chr9:104535926:+	ONLY_REF_SPLICE	YES	54	8	1.27	7.78	GT	1.5656	AG	1.9086	0.2723	860	0
NUP155--SHISAL2B	57	0	57.00	0.00	NUP155^ENSG00000113569.16	14740	chr5:37331685:-	SHISAL2B^ENSG00000145642.12	46211	chr5:64695507:+	ONLY_REF_SPLICE	YES	177	8	0.33	6.44	GT	1.7056	AG	1.8892	0.2249	5055	0
NUP155--SHISAL2B	4	0	4.00	0.00	NUP155^ENSG00000113569.16	14740	chr5:37331685:-	SHISAL2B^ENSG00000145642.12	47369	chr5:64717889:+	ONLY_REF_SPLICE	YES	177	77	0.03	0.06	GT	1.7056	AG	1.7968	0.0158	5665	0
TVP23C--CDRT4	57	0	57.00	0.00	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	INCL_NON_REF_SPLICE	YES	94	5	0.61	9.67	GT	1.9329	AG	1.9899	0.2249	1215	0
TVP23C--CDRT4	53	0	53.00	0.00	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	280	5	0.19	9.00	GT	1.8323	AG	1.9899	0.2091	2126	0
TVP23C--CDRT4	25	0	25.00	0.00	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	INCL_NON_REF_SPLICE	YES	94	47	0.27	0.54	GT	1.9329	AG	1.6402	0.0987	137	0
TVP23C--CDRT4	14	0	14.00	0.00	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	ONLY_REF_SPLICE	YES	280	47	0.05	0.31	GT	1.8323	AG	1.6402	0.0552	1363	0
TVP23C--CDRT4	8	0	8.00	0.00	TVP23C^ENSG00000175106.17	12676	chr17:15516419:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	23	5	0.38	1.50	GT	1.8892	AG	1.9899	0.0316	1949	0
TVP23C--CDRT4	5	0	5.00	0.00	TVP23C^ENSG00000175106.17	6853	chr17:15545785:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	148	5	0.04	1.00	GT	1.9086	AG	1.9899	0.0197	1774	0
SNX29--MARF1	53	0	53.00	0.00	SNX29^ENSG00000048471.14	29635	chr16:12524841:+	MARF1^ENSG00000166783.22	54784	chr16:15620531:-	ONLY_REF_SPLICE	YES	114	175	0.47	0.31	GT	1.7819	AG	1.9219	0.2091	136	0
SNX29--MARF1	3	0	3.00	0.00	SNX29^ENSG00000048471.14	29635	chr16:12524841:+	MARF1^ENSG00000166783.22	57395	chr16:15616005:-	ONLY_REF_SPLICE	YES	114	106	0.03	0.04	GT	1.7819	AG	1.8295	0.0118	1868	0
SNX29--MARF1	2	0	2.00	0.00	SNX29^ENSG00000048471.14	29635	chr16:12524841:+	MARF1^ENSG00000166783.22	55865	chr16:15617535:-	ONLY_REF_SPLICE	YES	114	168	0.03	0.02	GT	1.7819	AG	1.9329	0.0079	1060	0
ZNF785--ADD1	52	0	52.00	0.00	ZNF785^ENSG00000197162.10	3581	chr16:30582511:-	ADD1^ENSG00000087274.17	18979	chr4:2875896:+	ONLY_REF_SPLICE	YES	65	378	0.80	0.14	GT	1.2867	AG	1.8295	0.2052	1147	0
TLK2P1--AC110079.1	51	0	46.47	0.00	TLK2P1^ENSG00000226049.3	1830	chr17:34039043:-	AC110079.1^ENSG00000260404.3	8316	chr4:118595912:+	INCL_NON_REF_SPLICE	YES	41	37	1.24	1.37	GT	1.7465	AG	1.8892	0.1834	311	0
NRDC--AGBL4	48	1	48.00	1.00	NRDC^ENSG00000078618.22	26202	chr1:51800556:-	AGBL4^ENSG00000186094.17	46726	chr1:48663241:-	ONLY_REF_SPLICE	YES	313	6	0.16	7.14	GT	1.9899	AG	1.9329	0.1933	3685	0
SMIM14--PI4K2B	48	1	48.00	1.00	SMIM14^ENSG00000163683.12	3995	chr4:39605071:-	PI4K2B^ENSG00000038210.14	19526	chr4:25252321:+	ONLY_REF_SPLICE	YES	271	1182	0.18	0.04	GT	1.9656	AG	1.7968	0.1933	5423	0
SMIM14--PI4K2B	8	0	8.00	0.00	SMIM14^ENSG00000163683.12	3995	chr4:39605071:-	PI4K2B^ENSG00000038210.14	20681	chr4:25255065:+	ONLY_REF_SPLICE	YES	271	490	0.03	0.02	GT	1.9656	AG	1.5656	0.0316	5166	0
QKI--RNF217-AS1	47	0	47.00	0.00	QKI^ENSG00000112531.17	2336	chr6:163415335:+	RNF217-AS1^ENSG00000236548.2	32235	chr6:124948098:-	ONLY_REF_SPLICE	YES	1486	0	0.03	48.00	GT	1.8295	AG	1.8892	0.1855	1096	0
QKI--RNF217-AS1	11	0	11.00	0.00	QKI^ENSG00000112531.17	2336	chr6:163415335:+	RNF217-AS1^ENSG00000236548.2	36738	chr6:124935117:-	ONLY_REF_SPLICE	YES	1486	0	0.01	12.00	GT	1.8295	AG	1.7056	0.0434	2155	0
TLK2--AC240565.1	44	0	38.53	0.00	TLK2^ENSG00000146872.18	17137	chr17:62560126:+	AC240565.1^ENSG00000280136.2	41242	chr17:106864:-	ONLY_REF_SPLICE	YES	336	33	0.13	1.32	GT	1.8892	AG	1.8892	0.152	1734	0
AFAP1--KCNIP4	43	0	43.00	0.00	AFAP1^ENSG00000196526.10	1271	chr4:7939656:-	KCNIP4^ENSG00000185774.16	45374	chr4:20850667:-	ONLY_REF_SPLICE	YES	682	7	0.06	5.50	GT	1.7232	AG	1.8323	0.1697	1262	0
AFAP1--KCNIP4	1	0	1.00	0.00	AFAP1^ENSG00000196526.10	1271	chr4:7939656:-	KCNIP4^ENSG00000185774.16	46727	chr4:20758890:-	ONLY_REF_SPLICE	YES	682	47	0.00	0.04	GT	1.7232	AG	1.9656	0.0039	1861	0
AC239859.5--AC013734.1	41	0	41.00	0.00	AC239859.5^ENSG00000277702.1	1583	chr1:143419625:-	AC013734.1^ENSG00000277146.1	4587	chrY:26453985:+	INCL_NON_REF_SPLICE	YES	0	0	42.00	42.00	GT	1.7465	AG	1.8892	0.1618	10000	0
KCTD8--RELL1	38	0	38.00	0.00	KCTD8^ENSG00000183783.7	2247	chr4:44447563:-	RELL1^ENSG00000181826.10	11380	chr4:37649500:-	ONLY_REF_SPLICE	YES	33	1706	1.15	0.02	GT	1.7465	AG	1.8256	0.1499	6778	0
AC092807.3--DDAH1	32	0	32.00	0.00	AC092807.3^ENSG00000282057.1	5553	chr1:85496166:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	0	49	33.00	0.66	GT	1.5628	AG	1.8062	0.1263	3011	0
AC092807.3--DDAH1	10	0	10.00	0.00	AC092807.3^ENSG00000282057.1	1267	chr1:85577984:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	0	49	11.00	0.22	GT	1.8062	AG	1.8062	0.0395	2484	0
AC092807.3--DDAH1	1	0	1.00	0.00	AC092807.3^ENSG00000282057.1	5553	chr1:85496166:-	DDAH1^ENSG00000153904.21	17312	chr1:85351579:-	ONLY_REF_SPLICE	YES	0	55	2.00	0.04	GT	1.5628	AG	1.8062	0.0039	2313	0
LIMCH1--TRIM64C	30	0	30.00	0.00	LIMCH1^ENSG00000064042.18	13662	chr4:41606004:+	TRIM64C^ENSG00000214891.9	52456	chr11:49059116:-	INCL_NON_REF_SPLICE	YES	93	0	0.33	31.00	GT	1.9086	AG	1.8295	0.1184	1419	0
LIMCH1--AC116611.1	26	0	26.00	0.00	LIMCH1^ENSG00000064042.18	2330	chr4:41360936:+	AC116611.1^ENSG00000286784.1	58342	chr4:32585296:-	ONLY_REF_SPLICE	YES	352	0	0.08	27.00	GT	1.7819	AG	1.9656	0.1026	1054	0
MED13--RIPK1	25	0	25.00	0.00	MED13^ENSG00000108510.10	29284	chr17:61955481:-	RIPK1^ENSG00000137275.16	57545	chr6:3104225:+	INCL_NON_REF_SPLICE	YES	222	170	0.12	0.15	GT	1.8892	AG	1.7232	0.0987	321	0
NDUFS4--AC010327.4	25	0	25.00	0.00	NDUFS4^ENSG00000164258.12	6788	chr5:53658624:+	AC010327.4^ENSG00000267577.1	11658	chr19:55159422:+	ONLY_REF_SPLICE	YES	235	97	0.11	0.27	GT	1.6729	AG	1.6729	0.0987	4158	0
NDUFS4--AC010327.4	12	0	12.00	0.00	NDUFS4^ENSG00000164258.12	6788	chr5:53658624:+	AC010327.4^ENSG00000267577.1	13274	chr19:55161095:+	INCL_NON_REF_SPLICE	YES	235	196	0.06	0.07	GT	1.6729	AG	1.8256	0.0474	2649	0
SUSD1--PTBP3	21	0	21.00	0.00	SUSD1^ENSG00000106868.17	1165	chr9:112175133:-	PTBP3^ENSG00000119314.16	40817	chr9:112224210:-	ONLY_REF_SPLICE	YES	304	413	0.07	0.05	GT	1.2729	AG	1.8323	0.0829	3252	0
SUSD1--PTBP3	2	0	2.00	0.00	SUSD1^ENSG00000106868.17	1165	chr9:112175133:-	PTBP3^ENSG00000119314.16	41044	chr9:112223983:-	ONLY_REF_SPLICE	YES	304	513	0.01	0.01	GT	1.2729	AG	1.7232	0.0079	3466	0
C11orf49--TTC17	16	0	16.00	0.00	C11orf49^ENSG00000149179.14	3405	chr11:46987310:+	TTC17^ENSG00000052841.15	54972	chr11:43490239:+	ONLY_REF_SPLICE	YES	84	134	0.20	0.13	GT	1.8892	AG	1.9329	0.0631	1194	0
C11orf49--TTC17	4	0	4.00	0.00	C11orf49^ENSG00000149179.14	1163	chr11:46936851:+	TTC17^ENSG00000052841.15	54972	chr11:43490239:+	ONLY_REF_SPLICE	YES	61	134	0.08	0.04	GT	1.9899	AG	1.9329	0.0158	392	0
PPP1R8--STX12	16	0	16.00	0.00	PPP1R8^ENSG00000117751.18	6166	chr1:27843330:+	STX12^ENSG00000117758.14	16193	chr1:27801678:+	ONLY_REF_SPLICE	YES	433	586	0.04	0.03	GT	1.8323	AG	1.9329	0.0631	341	0
CHCHD6--ZBTB20	15	0	15.00	0.00	CHCHD6^ENSG00000159685.11	4484	chr3:126733222:+	ZBTB20^ENSG00000181722.17	37058	chr3:114693575:-	ONLY_REF_SPLICE	YES	76	3	0.21	4.00	GT	1.9656	AG	1.6895	0.0592	1783	0
CWC27--CPLANE1	14	0	14.00	0.00	CWC27^ENSG00000153015.16	16634	chr5:64885546:+	CPLANE1^ENSG00000197603.16	49938	chr5:37183699:-	ONLY_REF_SPLICE	YES	322	202	0.05	0.07	GT	1.1589	AG	1.6895	0.0552	1020	0
DNAJC3--ADPRHL1	12	0	12.00	0.00	DNAJC3^ENSG00000102580.15	8733	chr13:95763953:+	ADPRHL1^ENSG00000153531.13	23938	chr13:113429092:-	ONLY_REF_SPLICE	YES	497	35	0.03	0.36	GT	1.5301	AG	1.5301	0.0474	1313	0
PLCH2--ITGB3BP	10	0	10.00	0.00	PLCH2^ENSG00000149527.18	2350	chr1:2430629:+	ITGB3BP^ENSG00000142856.17	36260	chr1:63478833:-	ONLY_REF_SPLICE	YES	1550	115	0.01	0.09	GT	1.9329	AG	0.9056	0.0395	3213	0
TP53--DLEU1	5	0	5.00	0.00	TP53^ENSG00000141510.18	1162	chr17:7687377:-	DLEU1^ENSG00000176124.15	40968	chr13:50390198:+	ONLY_REF_SPLICE	YES	69	0	0.09	6.00	GT	1.8256	AG	1.8892	0.0197	1617	0
TP53--DLEU1	3	0	3.00	0.00	TP53^ENSG00000141510.18	1162	chr17:7687377:-	DLEU1^ENSG00000176124.15	49270	chr13:50415089:+	ONLY_REF_SPLICE	YES	69	0	0.06	4.00	GT	1.8256	AG	1.7819	0.0118	2391	0