Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/0d692de948cf63f579dd87089229cf/tih_rna_sample_00679_B23MVV7LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/29/7890f4a207597715a3a2fda2153b98/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/29/7890f4a207597715a3a2fda2153b98/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory