.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (tih_rna_sample_00725_B23MVV7LT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/cc142f70354f453964a5e13ab4eb0b/.command.log
Size: 953 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (tih_rna_sample_00725_B23MVV7LT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f8/e88fd7fc7045f143707b3a331bf8bc/ref_annot.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/cc142f70354f453964a5e13ab4eb0b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/76/4661a5001f0e6dbf4575818d5e747d/tih_rna_sample_00725_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/0dbcea99d42b561890373e855b6121/tih_rna_sample_00725_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/cc142f70354f453964a5e13ab4eb0b/.command.run
==> STAGING COMPLETE (5 inputs)

processing ref_annot.bed ... Done
[W::hts_idx_load3] The index file is older than the data file: tih_rna_sample_00725_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam.bai
processing tih_rna_sample_00725_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam ... Finished