Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/2059327ab6c76a71f3ebb0c515065d/tih_rna_sample_00723_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/38/2979eacc8e7a07ddae0189cf85ddb2/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/38/2979eacc8e7a07ddae0189cf85ddb2/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory