Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dd/c63bf091a96ffd62c5d78a40b488f8/tih_rna_sample_00652_B23MVV7LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/96/4d2cbf6bb3a74e6c98d80d8cd608ad/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/96/4d2cbf6bb3a74e6c98d80d8cd608ad/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory