Started job on | Jun 08 10:05:46
Started mapping on | Jun 08 10:12:10
Finished on | Jun 08 11:03:31
Mapping speed, Million of reads per hour | 326.12
Number of input reads | 279104709
Average input read length | 235
UNIQUE READS:
Uniquely mapped reads number | 264947289
Uniquely mapped reads % | 94.93%
Average mapped length | 234.55
Number of splices: Total | 253927027
Number of splices: Annotated (sjdb) | 249486371
Number of splices: GT/AG | 250208349
Number of splices: GC/AG | 1811715
Number of splices: AT/AC | 196944
Number of splices: Non-canonical | 1710019
Mismatch rate per base, % | 0.28%
Deletion rate per base | 0.04%
Deletion average length | 2.24
Insertion rate per base | 0.00%
Insertion average length | 1.60
MULTI-MAPPING READS:
Number of reads mapped to multiple loci | 10225571
% of reads mapped to multiple loci | 3.66%
Number of reads mapped to too many loci | 1042408
% of reads mapped to too many loci | 0.37%
UNMAPPED READS:
Number of reads unmapped: too many mismatches | 0
% of reads unmapped: too many mismatches | 0.00%
Number of reads unmapped: too short | 2490717
% of reads unmapped: too short | 0.89%
Number of reads unmapped: other | 398724
% of reads unmapped: other | 0.14%
CHIMERIC READS:
Number of chimeric reads | 0
% of chimeric reads | 0.00%