Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/c5b909ffe806c35fe8eb4d74808bc2/tih_rna_sample_00761_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir/ref_genome.fa
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/12611a5903169ba3ab29bd47d9e942/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/12611a5903169ba3ab29bd47d9e942/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d8/4dfabb1f7767554e70b71618124038/tih_rna_sample_00761_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam.bai
==> STAGING COMPLETE (5 inputs)

ls: *.sam: No such file or directory
ls: *.csi: No such file or directory
ls: *.crai: No such file or directory