-ctat genome lib [/tmp/nxf.mr1TmT3HHI/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.mr1TmT3HHI/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary
-sample contains 146385162 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.mr1TmT3HHI/ctat_genome_lib_build_dir -J /tmp/nxf.mr1TmT3HHI/tih_rna_sample_00703_B23MVV7LT4_1.Chimeric.out.junction -O /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.mr1TmT3HHI/tih_rna_sample_00703_B23MVV7LT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.mr1TmT3HHI/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
[10000], rate=46153.85/min
[20000], rate=38709.68/min
[30000], rate=37500.00/min
[40000], rate=39344.26/min
[50000], rate=40000.00/min
[60000], rate=41379.31/min
[70000], rate=42424.24/min
[80000], rate=42857.14/min
[90000], rate=43548.39/min
[100000], rate=44444.44/min
[110000], rate=45205.48/min
[120000], rate=45859.87/min
[130000], rate=46706.59/min
[140000], rate=47727.27/min
[150000], rate=49180.33/min
[160000], rate=50261.78/min
[170000], rate=51515.15/min
[180000], rate=52173.91/min
[190000], rate=53271.03/min
[200000], rate=54298.64/min
[210000], rate=55506.61/min
[220000], rate=57142.86/min
[230000], rate=58474.58/min
[240000], rate=59751.04/min
[250000], rate=60975.61/min
[260000], rate=60937.50/min
[270000], rate=59558.82/min
[280000], rate=58741.26/min
[290000], rate=58000.00/min
[300000], rate=56426.33/min
[310000], rate=55855.86/min
[320000], rate=55491.33/min
[330000], rate=54847.65/min
[340000], rate=54400.00/min
[350000], rate=54123.71/min
[360000], rate=54000.00/min
[370000], rate=53493.98/min
[380000], rate=53146.85/min
[390000], rate=52584.27/min
[400000], rate=51724.14/min
[410000], rate=51680.67/min
[420000], rate=51851.85/min
[430000], rate=52016.13/min
[440000], rate=52173.91/min
[450000], rate=52325.58/min
[460000], rate=52471.48/min
[470000], rate=52611.94/min
[480000], rate=52844.04/min
[490000], rate=53068.59/min
[500000], rate=53285.97/min
[510000], rate=53403.14/min
[520000], rate=53608.25/min
[530000], rate=53898.31/min
[540000], rate=54271.36/min
[550000], rate=54817.28/min
[560000], rate=55263.16/min
[570000], rate=55700.33/min
[580000], rate=56129.03/min
[590000], rate=56549.52/min
[600000], rate=56962.03/min
[610000], rate=57547.17/min
[620000], rate=58034.32/min
[630000], rate=58423.49/min
[640000], rate=58805.51/min
[650000], rate=59001.51/min
[660000], rate=59281.44/min
[670000], rate=59379.62/min
[680000], rate=59736.46/min
[690000], rate=60087.08/min
[700000], rate=60431.65/min
[710000], rate=60857.14/min
[720000], rate=61189.80/min
[730000], rate=61516.85/min
[740000], rate=61924.69/min
[750000], rate=62326.87/min
[760000], rate=62723.52/min
[770000], rate=63114.75/min
[780000], rate=63414.63/min
[790000], rate=63795.42/min
[800000], rate=64516.13/min
[810000], rate=65322.58/min
[820000], rate=66040.27/min
[830000], rate=66577.54/min
[840000], rate=67110.52/min
[850000], rate=67729.08/min
[860000], rate=68163.80/min
[870000], rate=68593.96/min
[880000], rate=68929.50/min
[890000], rate=69170.98/min
[900000], rate=69587.63/min
[910000], rate=69820.97/min
[920000], rate=70229.01/min
[930000], rate=70812.18/min
[940000], rate=71302.15/min
[950000], rate=71608.04/min
[960000], rate=72000.00/min
[970000], rate=72659.18/min
[980000], rate=73408.24/min
[990000], rate=74064.84/min
[1000000], rate=74534.16/min
[1010000], rate=75092.94/min
[1020000], rate=75555.56/min
[1030000], rate=75921.38/min
[1040000], rate=76283.62/min
[1050000], rate=76549.21/min
[1060000], rate=77090.91/min
[1070000], rate=77256.32/min
[1080000], rate=77511.96/min
[1090000], rate=77672.21/min
[1100000], rate=78014.18/min
[1110000], rate=78352.94/min
[1120000], rate=78965.92/min
[1130000], rate=79670.98/min
[1140000], rate=80281.69/min
[1150000], rate=80607.48/min
[1160000], rate=80930.23/min
[1170000], rate=81156.07/min
[1180000], rate=81379.31/min
[1190000], rate=81506.85/min
[1200000], rate=81632.65/min
[1210000], rate=81848.93/min
[1220000], rate=82062.78/min
[1230000], rate=82366.07/min
[1240000], rate=82666.67/min
[1250000], rate=82872.93/min
[1260000], rate=82894.74/min
[1270000], rate=82916.21/min
[1280000], rate=82937.37/min
[1290000], rate=83047.21/min
[1300000], rate=83244.40/min
[1310000], rate=83439.49/min
[1320000], rate=83544.30/min
[1330000], rate=83735.57/min
[1340000], rate=83924.84/min
[1350000], rate=84112.15/min
[1360000], rate=84210.53/min
[1370000], rate=84394.25/min
[1380000], rate=83720.93/min
[1390000], rate=83150.55/min
[1400000], rate=82677.17/min
[1410000], rate=82056.26/min
[1420000], rate=81687.44/min
[1430000], rate=81327.01/min
[1440000], rate=81050.66/min
[1450000], rate=80555.56/min
[1460000], rate=80073.13/min
[1470000], rate=79891.30/min
[1480000], rate=79641.26/min
[1490000], rate=79466.67/min
[1500000], rate=79365.08/min
[1510000], rate=79265.09/min
[1520000], rate=79166.67/min
[1530000], rate=79137.93/min
[1540000], rate=79109.59/min
[1550000], rate=79081.63/min
[1560000], rate=79054.05/min
[1570000], rate=79159.66/min
[1580000], rate=79264.21/min -building interval tree based on /tmp/nxf.mr1TmT3HHI/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
[10000], rate=75000.00/min
[20000], rate=70588.24/min
[30000], rate=72000.00/min
[40000], rate=58536.59/min
[50000], rate=52631.58/min
[60000], rate=50000.00/min
[70000], rate=49411.76/min
[80000], rate=48484.85/min
[90000], rate=48648.65/min
[100000], rate=49180.33/min
[110000], rate=50000.00/min
[120000], rate=50704.23/min
[130000], rate=51315.79/min
[140000], rate=51851.85/min
[150000], rate=52941.18/min
[160000], rate=53932.58/min
[170000], rate=55135.14/min
[180000], rate=56250.00/min
[190000], rate=56435.64/min
[200000], rate=56074.77/min
[210000], rate=55021.83/min
[220000], rate=54320.99/min
[230000], rate=53696.50/min
[240000], rate=53932.58/min
[250000], rate=53956.83/min
[260000], rate=53608.25/min
[270000], rate=54000.00/min
[280000], rate=54019.29/min
[290000], rate=54716.98/min
[300000], rate=55214.72/min
[310000], rate=55357.14/min
[320000], rate=55976.68/min
[330000], rate=56250.00/min
[340000], rate=56509.70/min
[350000], rate=56756.76/min
[360000], rate=57142.86/min
[370000], rate=57963.45/min
[380000], rate=58461.54/min
[390000], rate=59240.51/min
[400000], rate=60000.00/min
[410000], rate=60000.00/min
[420000], rate=59715.64/min
[430000], rate=59038.90/min
[440000], rate=59060.40/min
[450000], rate=59080.96/min
[460000], rate=59227.47/min
[470000], rate=59368.42/min
[480000], rate=59137.58/min
[490000], rate=58449.30/min
[500000], rate=58365.76/min
[510000], rate=58396.95/min
[520000], rate=58317.76/min
[530000], rate=58241.76/min
[540000], rate=58273.38/min
[550000], rate=58407.08/min
[560000], rate=58536.59/min
[570000], rate=58662.09/min
[580000], rate=58883.25/min
[590000], rate=59098.50/min
[600000], rate=59405.94/min
[610000], rate=59706.36/min
[620000], rate=60096.93/min
[630000], rate=60383.39/min
[640000], rate=60855.78/min
[650000], rate=61320.75/min
[660000], rate=61682.24/min
[670000], rate=62132.92/min
[680000], rate=62006.08/min
[690000], rate=61607.14/min
[700000], rate=61403.51/min
[710000], rate=61294.96/min
[720000], rate=61276.60/min
[730000], rate=61344.54/min
[740000], rate=61157.02/min
[750000], rate=61058.34/min
[760000], rate=61044.18/min
[770000], rate=61192.05/min
[780000], rate=61256.54/min
[790000], rate=61319.53/min
[800000], rate=61538.46/min
[810000], rate=61596.96/min
[820000], rate=61654.14/min
[830000], rate=61557.48/min
[840000], rate=61463.41/min
[850000], rate=61519.90/min
[860000], rate=61722.49/min
[870000], rate=61848.34/min
[880000], rate=61899.18/min
[890000], rate=62093.02/min
[900000], rate=62283.74/min
[910000], rate=62542.96/min
[920000], rate=62941.85/min
[930000], rate=63122.17/min
[940000], rate=63370.79/min
[950000], rate=63758.39/min
[960000], rate=64000.00/min
[970000], rate=64380.53/min
[980000], rate=64403.07/min
[990000], rate=64355.36/min
[1000000], rate=64308.68/min
[1010000], rate=64262.99/min
[1020000], rate=64285.71/min
[1030000], rate=64174.45/min
[1040000], rate=64131.55/min
[1050000], rate=64024.39/min
[1060000], rate=63983.90/min
[1070000], rate=63944.22/min
[1080000], rate=64031.62/min
[1090000], rate=63929.62/min
[1100000], rate=64015.52/min
[1110000], rate=64161.85/min
[1120000], rate=64306.22/min
[1130000], rate=64509.99/min
[1140000], rate=64711.45/min
[1150000], rate=64910.63/min
[1160000], rate=65168.54/min
[1170000], rate=65546.22/min
[1180000], rate=65860.47/min
[1190000], rate=66172.38/min
[1200000], rate=66481.99/min
[1210000], rate=66727.94/min
[1220000], rate=66971.64/min
[1230000], rate=66847.83/min
[1240000], rate=66786.36/min
[1250000], rate=66725.98/min
[1260000], rate=66666.67/min
[1270000], rate=66666.67/min
[1280000], rate=66724.59/min
[1290000], rate=66724.14/min
[1300000], rate=66838.05/min
[1310000], rate=66950.60/min
[1320000], rate=67061.81/min
[1330000], rate=67171.72/min
[1340000], rate=67336.68/min
[1350000], rate=67500.00/min
[1360000], rate=67605.63/min
[1370000], rate=67933.88/min
[1380000], rate=68092.11/min
[1390000], rate=68304.67/min
[1400000], rate=68515.50/min
[1410000], rate=68724.61/min
[1420000], rate=68709.68/min
[1430000], rate=68694.96/min
[1440000], rate=68680.45/min
[1450000], rate=68666.14/min
[1460000], rate=68652.04/min
[1470000], rate=68745.13/min
[1480000], rate=68783.89/min
[1490000], rate=68875.19/min
[1500000], rate=68965.52/min
[1510000], rate=69054.88/min
[1520000], rate=69300.91/min
[1530000], rate=69440.24/min
[1540000], rate=69578.31/min
[1550000], rate=69819.82/min
[1560000], rate=70007.48/min
[1570000], rate=70193.74/min -building interval tree based on /tmp/nxf.mr1TmT3HHI/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
[10000], rate=100000.00/min
[20000], rate=80000.00/min
[30000], rate=90000.00/min
[40000], rate=88888.89/min
[50000], rate=103448.28/min
[60000], rate=124137.93/min
[70000], rate=140000.00/min
[80000], rate=150000.00/min
[90000], rate=150000.00/min
[100000], rate=146341.46/min
[110000], rate=153488.37/min
[120000], rate=144000.00/min
[130000], rate=141818.18/min
[140000], rate=137704.92/min
[150000], rate=142857.14/min
[160000], rate=141176.47/min
[170000], rate=147826.09/min
[180000], rate=156521.74/min
[190000], rate=162857.14/min
[200000], rate=164383.56/min
[210000], rate=163636.36/min
[220000], rate=162962.96/min
[230000], rate=164285.71/min
[240000], rate=161797.75/min
[250000], rate=159574.47/min
[260000], rate=156000.00/min
[270000], rate=157281.55/min
[280000], rate=155555.56/min
[290000], rate=161111.11/min
[300000], rate=166666.67/min
[310000], rate=169090.91/min
[320000], rate=169911.50/min
[330000], rate=169230.77/min
[340000], rate=167213.11/min
[350000], rate=165354.33/min
[360000], rate=164885.50/min
[370000], rate=160869.57/min
[380000], rate=161702.13/min
[390000], rate=161379.31/min
[400000], rate=165517.24/min
[410000], rate=168493.15/min
[420000], rate=171428.57/min
[430000], rate=170860.93/min
[440000], rate=169230.77/min
[450000], rate=157894.74/min
[460000], rate=140816.33/min
[470000], rate=129953.92/min
[480000], rate=120502.09/min
[490000], rate=113513.51/min
[500000], rate=107526.88/min
[510000], rate=102684.56/min
[520000], rate=97805.64/min
[530000], rate=92982.46/min
[540000], rate=90000.00/min
[550000], rate=87301.59/min
[560000], rate=84848.48/min
[570000], rate=82608.70/min
[580000], rate=81118.88/min
[590000], rate=79372.20/min
[600000], rate=77253.22/min
[610000], rate=75776.40/min
[620000], rate=74400.00/min
[630000], rate=73114.12/min
[640000], rate=72180.45/min
[650000], rate=71428.57/min
[660000], rate=70967.74/min
[670000], rate=70157.07/min
[680000], rate=69743.59/min
[690000], rate=69463.09/min
[700000], rate=69192.75/min
[710000], rate=68932.04/min
[720000], rate=68680.45/min
[730000], rate=68330.73/min
[740000], rate=67889.91/min
[750000], rate=67771.08/min
[760000], rate=67655.79/min
[770000], rate=67543.86/min
[780000], rate=67338.13/min
[790000], rate=67043.85/min
[800000], rate=66852.37/min
[810000], rate=66758.24/min
[820000], rate=66666.67/min
[830000], rate=66577.54/min
[840000], rate=66578.60/min
[850000], rate=66579.63/min
[860000], rate=66666.67/min
[870000], rate=66751.92/min
[880000], rate=66920.15/min
[890000], rate=67001.25/min
[900000], rate=67080.75/min
[910000], rate=67241.38/min
[920000], rate=67399.27/min
[930000], rate=67718.45/min
[940000], rate=67870.04/min
[950000], rate=68100.36/min
[960000], rate=68327.40/min
[970000], rate=68470.59/min
[980000], rate=68213.46/min
[990000], rate=68041.24/min
[1000000], rate=67796.61/min
[1010000], rate=67709.50/min
[1020000], rate=67549.67/min
[1030000], rate=67540.98/min
[1040000], rate=67678.96/min
[1050000], rate=67814.85/min
[1060000], rate=67803.84/min
[1070000], rate=67936.51/min
[1080000], rate=67924.53/min
[1090000], rate=68125.00/min
[1100000], rate=68252.33/min
[1110000], rate=68448.10/min
[1120000], rate=68571.43/min
[1130000], rate=68762.68/min
[1140000], rate=68882.18/min
[1150000], rate=69138.28/min
[1160000], rate=69391.82/min
[1170000], rate=69230.77/min
[1180000], rate=68871.60/min
[1190000], rate=68522.07/min
[1200000], rate=68246.45/min
[1210000], rate=68041.24/min
[1220000], rate=67652.50/min
[1230000], rate=67458.87/min
[1240000], rate=67330.32/min
[1250000], rate=67144.14/min
[1260000], rate=67021.28/min
[1270000], rate=66959.58/min
[1280000], rate=66957.28/min
[1290000], rate=66839.38/min
[1300000], rate=66895.37/min
[1310000], rate=66950.60/min
[1320000], rate=66891.89/min
[1330000], rate=66890.19/min
[1340000], rate=66832.92/min
[1350000], rate=66886.87/min
[1360000], rate=66885.25/min
[1370000], rate=66883.65/min
[1380000], rate=66936.14/min
[1390000], rate=66987.95/min
[1400000], rate=67039.11/min
[1410000], rate=67142.86/min
[1420000], rate=67245.46/min
[1430000], rate=67399.84/min
[1440000], rate=67552.78/min
[1450000], rate=67757.01/min
[1460000], rate=67959.66/min
[1470000], rate=68108.11/min
[1480000], rate=68307.69/min
[1490000], rate=68348.62/min
[1500000], rate=68130.20/min
[1510000], rate=67916.04/min
[1520000], rate=67706.01/min
[1530000], rate=67549.67/min
[1540000], rate=67494.52/min
[1550000], rate=67293.78/min
[1560000], rate=67241.38/min
[1570000], rate=67141.84/min -building interval tree based on /tmp/nxf.mr1TmT3HHI/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
[10000], rate=40000.00/min
[20000], rate=42857.14/min
[30000], rate=42857.14/min
[40000], rate=42105.26/min
[50000], rate=42857.14/min
[60000], rate=43902.44/min
[70000], rate=44680.85/min
[80000], rate=44444.44/min
[90000], rate=45762.71/min
[100000], rate=46875.00/min
[110000], rate=47826.09/min
[120000], rate=48979.59/min
[130000], rate=49681.53/min
[140000], rate=50909.09/min
[150000], rate=52631.58/min
[160000], rate=53333.33/min
[170000], rate=54838.71/min
[180000], rate=55958.55/min
[190000], rate=57575.76/min
[200000], rate=58823.53/min
[210000], rate=59433.96/min
[220000], rate=59728.51/min
[230000], rate=60792.95/min
[240000], rate=61802.58/min
[250000], rate=62761.51/min
[260000], rate=63157.89/min
[270000], rate=64031.62/min
[280000], rate=64615.38/min
[290000], rate=63736.26/min
[300000], rate=63604.24/min
[310000], rate=63265.31/min
[320000], rate=62745.10/min
[330000], rate=62857.14/min
[340000], rate=62962.96/min
[350000], rate=63063.06/min
[360000], rate=63529.41/min
[370000], rate=64161.85/min
[380000], rate=64772.73/min
[390000], rate=65000.00/min
[400000], rate=65217.39/min
[410000], rate=65600.00/min
[420000], rate=66315.79/min
[430000], rate=67362.92/min
[440000], rate=67866.32/min
[450000], rate=66997.52/min
[460000], rate=66506.02/min
[470000], rate=66352.94/min
[480000], rate=66359.45/min
[490000], rate=66365.69/min
[500000], rate=66225.17/min
[510000], rate=66233.77/min
[520000], rate=66382.98/min
[530000], rate=66527.20/min
[540000], rate=66666.67/min
[550000], rate=66801.62/min
[560000], rate=67065.87/min
[570000], rate=67455.62/min
[580000], rate=67968.75/min
[590000], rate=68737.86/min
[600000], rate=69364.16/min
[610000], rate=69847.33/min
[620000], rate=70321.36/min
[630000], rate=70129.87/min
[640000], rate=69691.47/min
[650000], rate=69271.76/min
[660000], rate=69109.95/min
[670000], rate=68835.62/min
[680000], rate=68571.43/min
[690000], rate=68316.83/min
[700000], rate=68181.82/min
[710000], rate=68051.12/min
[720000], rate=68031.50/min
[730000], rate=68012.42/min
[740000], rate=67993.87/min
[750000], rate=67975.83/min
[760000], rate=67756.32/min
[770000], rate=67741.94/min
[780000], rate=67630.06/min
[790000], rate=67714.29/min
[800000], rate=67605.63/min
[810000], rate=67593.88/min
[820000], rate=67675.38/min
[830000], rate=67663.04/min
[840000], rate=67651.01/min
[850000], rate=67639.26/min
[860000], rate=67716.54/min
[870000], rate=67792.21/min
[880000], rate=67692.31/min
[890000], rate=67852.60/min
[900000], rate=67924.53/min
[910000], rate=67995.02/min
[920000], rate=67980.30/min
[930000], rate=68131.87/min
[940000], rate=68198.31/min
[950000], rate=68427.37/min
[960000], rate=68653.16/min
[970000], rate=68875.74/min
[980000], rate=69095.18/min
[990000], rate=69392.52/min
[1000000], rate=69686.41/min
[1010000], rate=69099.20/min
[1020000], rate=68609.87/min
[1030000], rate=68211.92/min
[1040000], rate=67899.89/min
[1050000], rate=67741.94/min
[1060000], rate=67515.92/min
[1070000], rate=67295.60/min
[1080000], rate=67150.26/min
[1090000], rate=66734.69/min
[1100000], rate=66532.26/min
[1110000], rate=66400.80/min
[1120000], rate=66272.19/min
[1130000], rate=66081.87/min
[1140000], rate=66023.17/min
[1150000], rate=65839.69/min
[1160000], rate=65784.50/min
[1170000], rate=65853.66/min
[1180000], rate=65860.47/min
[1190000], rate=65867.16/min
[1200000], rate=65813.53/min
[1210000], rate=65880.22/min
[1220000], rate=65827.34/min
[1230000], rate=65834.08/min
[1240000], rate=65724.38/min
[1250000], rate=65731.81/min
[1260000], rate=65853.66/min
[1270000], rate=65916.96/min
[1280000], rate=66092.94/min
[1290000], rate=66267.12/min
[1300000], rate=66439.52/min
[1310000], rate=66553.77/min
[1320000], rate=66779.09/min
[1330000], rate=67002.52/min
[1340000], rate=67167.92/min
[1350000], rate=67387.69/min
[1360000], rate=67549.67/min
[1370000], rate=67765.87/min
[1380000], rate=67868.85/min
[1390000], rate=68137.25/min
[1400000], rate=68292.68/min
[1410000], rate=68446.60/min
[1420000], rate=68654.31/min
[1430000], rate=68860.35/min
[1440000], rate=68680.45/min
[1450000], rate=68396.23/min
[1460000], rate=68171.21/min
[1470000], rate=67950.69/min
[1480000], rate=67786.26/min
[1490000], rate=67573.70/min
[1500000], rate=67314.88/min
[1510000], rate=67160.86/min
[1520000], rate=67058.82/min
[1530000], rate=66860.89/min
[1540000], rate=66763.01/min
[1550000], rate=66666.67/min
[1560000], rate=66619.22/min
[1570000], rate=66525.42/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.mr1TmT3HHI/ctat_genome_lib_build_dir --filt_file /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
12000000.00 reads per min processed...
9000000.00 reads per min processed...
12000000.00 reads per min processed...
10000000.00 reads per min processed...
7200000.00 reads per min processed...
7000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
5538461.54 reads per min processed...
5571428.57 reads per min processed...
5600000.00 reads per min processed...
5625000.00 reads per min processed...
5333333.33 reads per min processed...
5368421.05 reads per min processed...
5142857.14 reads per min processed...
5181818.18 reads per min processed...
5000000.00 reads per min processed...
4846153.85 reads per min processed...
4888888.89 reads per min processed...
4758620.69 reads per min processed...
4800000.00 reads per min processed...
4838709.68 reads per min processed...
4727272.73 reads per min processed...
4764705.88 reads per min processed...
4800000.00 reads per min processed...
4833333.33 reads per min processed...
4736842.11 reads per min processed...
4769230.77 reads per min processed...
4800000.00 reads per min processed...
4950000.00 reads per min processed...
5100000.00 reads per min processed...
5121951.22 reads per min processed...
5142857.14 reads per min processed...
5162790.70 reads per min processed...
5181818.18 reads per min processed...
5200000.00 reads per min processed...
5217391.30 reads per min processed...
5234042.55 reads per min processed...
5142857.14 reads per min processed...
5160000.00 reads per min processed...
5176470.59 reads per min processed...
5192307.69 reads per min processed...
5207547.17 reads per min processed...
5127272.73 reads per min processed...
5142857.14 reads per min processed...
5157894.74 reads per min processed...
5172413.79 reads per min processed...
5186440.68 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.mr1TmT3HHI/tih_rna_sample_00703_B23MVV7LT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.mr1TmT3HHI/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -213198.593495
EM: Round [1] log likelihood: -213083.289801
EM: Round [2] log likelihood: -213038.590111
EM: Round [3] log likelihood: -213017.259704
EM: Round [4] log likelihood: -213006.026873
EM: Round [5] log likelihood: -212999.731652
EM: Round [6] log likelihood: -212996.024894
EM: Round [7] log likelihood: -212993.741583
EM: Round [8] log likelihood: -212992.273975
EM: Round [9] log likelihood: -212991.292349
EM: Round [10] log likelihood: -212990.611205
EM: Round [11] log likelihood: -212990.122471
EM: Round [12] log likelihood: -212989.761040
EM: Round [13] log likelihood: -212989.486422
EM: Round [14] log likelihood: -212989.272665
EM: Round [15] log likelihood: -212989.102665
EM: Round [16] log likelihood: -212988.964852
EM: Round [17] log likelihood: -212988.851210
EM: Round [18] log likelihood: -212988.756065
EM: Round [19] log likelihood: -212988.675321
EM: Round [20] log likelihood: -212988.605963
EM: Round [21] log likelihood: -212988.545739
EM: Round [22] log likelihood: -212988.492937
EM: Round [23] log likelihood: -212988.446241
EM: Round [24] log likelihood: -212988.404621
EM: Round [25] log likelihood: -212988.367265
EM: Round [26] log likelihood: -212988.333525
EM: Round [27] log likelihood: -212988.302874
EM: Round [28] log likelihood: -212988.274887
EM: Round [29] log likelihood: -212988.249212
EM: Round [30] log likelihood: -212988.225556
EM: Round [31] log likelihood: -212988.203676
EM: Round [32] log likelihood: -212988.183367
EM: Round [33] log likelihood: -212988.164455
EM: Round [34] log likelihood: -212988.146791
EM: Round [35] log likelihood: -212988.130249
EM: Round [36] log likelihood: -212988.114718
EM: Round [37] log likelihood: -212988.100104
EM: Round [38] log likelihood: -212988.086324
EM: Round [39] log likelihood: -212988.073305
EM: Round [40] log likelihood: -212988.060985
EM: Round [41] log likelihood: -212988.049306
EM: Round [42] log likelihood: -212988.038220
EM: Round [43] log likelihood: -212988.027682
EM: Round [44] log likelihood: -212988.017653
EM: Round [45] log likelihood: -212988.008096
EM: Round [46] log likelihood: -212987.998981
EM: Round [47] log likelihood: -212987.990279
EM: Round [48] log likelihood: -212987.981964
EM: Round [49] log likelihood: -212987.974012
EM: Round [50] log likelihood: -212987.966401
EM: Round [51] log likelihood: -212987.959112
EM: Round [52] log likelihood: -212987.952127
EM: Round [53] log likelihood: -212987.945430
EM: Round [54] log likelihood: -212987.939004
EM: Round [55] log likelihood: -212987.932836
EM: Round [56] log likelihood: -212987.926913
EM: Round [57] log likelihood: -212987.921223
EM: Round [58] log likelihood: -212987.915754
EM: Round [59] log likelihood: -212987.910495
EM: Round [60] log likelihood: -212987.905438
EM: Round [61] log likelihood: -212987.900572
EM: Round [62] log likelihood: -212987.895889
EM: Round [63] log likelihood: -212987.891380
EM: Round [64] log likelihood: -212987.887039
EM: Round [65] log likelihood: -212987.882858
EM: Round [66] log likelihood: -212987.878830
EM: Round [67] log likelihood: -212987.874948
EM: Round [68] log likelihood: -212987.871207
EM: Round [69] log likelihood: -212987.867601
EM: Round [70] log likelihood: -212987.864124
EM: Round [71] log likelihood: -212987.860770
EM: Round [72] log likelihood: -212987.857536
EM: Round [73] log likelihood: -212987.854416
EM: Round [74] log likelihood: -212987.851406
EM: Round [75] log likelihood: -212987.848502
EM: Round [76] log likelihood: -212987.845698
EM: Round [77] log likelihood: -212987.842993
EM: Round [78] log likelihood: -212987.840381
EM: Round [79] log likelihood: -212987.837860
EM: Round [80] log likelihood: -212987.835425
EM: Round [81] log likelihood: -212987.833074
EM: Round [82] log likelihood: -212987.830804
EM: Round [83] log likelihood: -212987.828611
EM: Round [84] log likelihood: -212987.826493
EM: Round [85] log likelihood: -212987.824446
EM: Round [86] log likelihood: -212987.822470
EM: Round [87] log likelihood: -212987.820559
EM: Round [88] log likelihood: -212987.818714
EM: Round [89] log likelihood: -212987.816930
EM: Round [90] log likelihood: -212987.815206
EM: Round [91] log likelihood: -212987.813540
EM: Round [92] log likelihood: -212987.811929
EM: Round [93] log likelihood: -212987.810372
EM: Round [94] log likelihood: -212987.808867
EM: Round [95] log likelihood: -212987.807412
EM: Round [96] log likelihood: -212987.806005
EM: Round [97] log likelihood: -212987.804644
EM: Round [98] log likelihood: -212987.803329
EM: Round [99] log likelihood: -212987.802057
EM: Round [100] log likelihood: -212987.800826
EM: Round [101] log likelihood: -212987.799636
EM: Round [102] log likelihood: -212987.798485
EM: Round [103] log likelihood: -212987.797372
EM: Round [104] log likelihood: -212987.796295
EM: Round [105] log likelihood: -212987.795253
EM: Round [106] log likelihood: -212987.794245
EM: Round [107] log likelihood: -212987.793269
EM: Round [108] log likelihood: -212987.792326
EM: Round [109] log likelihood: -212987.791413
EM: Round [110] log likelihood: -212987.790529
EM: Round [111] log likelihood: -212987.789674
EM: Round [112] log likelihood: -212987.788847
EM: Round [113] log likelihood: -212987.788046
EM: Round [114] log likelihood: -212987.787271
EM: Round [115] log likelihood: -212987.786521
EM: Round [116] log likelihood: -212987.785795
EM: Round [117] log likelihood: -212987.785092
EM: Round [118] log likelihood: -212987.784412
EM: Round [119] log likelihood: -212987.783753
EM: Round [120] log likelihood: -212987.783116
EM: Round [121] log likelihood: -212987.782499
EM: Round [122] log likelihood: -212987.781901
EM: Round [123] log likelihood: -212987.781323
EM: Round [124] log likelihood: -212987.780763
EM: Round [125] log likelihood: -212987.780221
EM: Round [126] log likelihood: -212987.779695
EM: Round [127] log likelihood: -212987.779187
EM: Round [128] log likelihood: -212987.778695
EM: Round [129] log likelihood: -212987.778218
EM: Round [130] log likelihood: -212987.777756
EM: Round [131] log likelihood: -212987.777309
EM: Round [132] log likelihood: -212987.776876
EM: Round [133] log likelihood: -212987.776456
EM: Round [134] log likelihood: -212987.776050
EM: Round [135] log likelihood: -212987.775657
EM: Round [136] log likelihood: -212987.775275
EM: Round [137] log likelihood: -212987.774906
EM: Round [138] log likelihood: -212987.774549
EM: Round [139] log likelihood: -212987.774202
EM: Round [140] log likelihood: -212987.773867
EM: Round [141] log likelihood: -212987.773542
EM: Round [142] log likelihood: -212987.773227
EM: Round [143] log likelihood: -212987.772922
EM: Round [144] log likelihood: -212987.772626
EM: Round [145] log likelihood: -212987.772340
EM: Round [146] log likelihood: -212987.772063
EM: Round [147] log likelihood: -212987.771794
EM: Round [148] log likelihood: -212987.771533
EM: Round [149] log likelihood: -212987.771281
EM: Round [150] log likelihood: -212987.771037
EM: Round [151] log likelihood: -212987.770800
EM: Round [152] log likelihood: -212987.770570
EM: Round [153] log likelihood: -212987.770348
EM: Round [154] log likelihood: -212987.770132
EM: Round [155] log likelihood: -212987.769923
EM: Round [156] log likelihood: -212987.769721
EM: Round [157] log likelihood: -212987.769525
EM: Round [158] log likelihood: -212987.769335
EM: Round [159] log likelihood: -212987.769151
EM: Round [160] log likelihood: -212987.768972
EM: Round [161] log likelihood: -212987.768799
EM: Round [162] log likelihood: -212987.768631
EM: Round [163] log likelihood: -212987.768469
EM: Round [164] log likelihood: -212987.768311
EM: Round [165] log likelihood: -212987.768159
EM: Round [166] log likelihood: -212987.768011
EM: Round [167] log likelihood: -212987.767867
EM: Round [168] log likelihood: -212987.767728
EM: Round [169] log likelihood: -212987.767594
EM: Round [170] log likelihood: -212987.767463
EM: Round [171] log likelihood: -212987.767337
EM: Round [172] log likelihood: -212987.767214
EM: Round [173] log likelihood: -212987.767095
EM: Round [174] log likelihood: -212987.766980
EM: Round [175] log likelihood: -212987.766868
EM: Round [176] log likelihood: -212987.766760
EM: Round [177] log likelihood: -212987.766655
EM: Round [178] log likelihood: -212987.766553
EM: Round [179] log likelihood: -212987.766454
EM: Stopping iterations at round 179 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -213083.371451
EM: Round [1] log likelihood: -212981.376023
EM: Round [2] log likelihood: -212942.521767
EM: Round [3] log likelihood: -212924.271567
EM: Round [4] log likelihood: -212914.783076
EM: Round [5] log likelihood: -212909.523023
EM: Round [6] log likelihood: -212906.457682
EM: Round [7] log likelihood: -212904.588805
EM: Round [8] log likelihood: -212903.399685
EM: Round [9] log likelihood: -212902.611995
EM: Round [10] log likelihood: -212902.070295
EM: Round [11] log likelihood: -212901.684719
EM: Round [12] log likelihood: -212901.401542
EM: Round [13] log likelihood: -212901.187606
EM: Round [14] log likelihood: -212901.021812
EM: Round [15] log likelihood: -212900.890351
EM: Round [16] log likelihood: -212900.783942
EM: Round [17] log likelihood: -212900.696198
EM: Round [18] log likelihood: -212900.622625
EM: Round [19] log likelihood: -212900.560002
EM: Round [20] log likelihood: -212900.505975
EM: Round [21] log likelihood: -212900.458797
EM: Round [22] log likelihood: -212900.417152
EM: Round [23] log likelihood: -212900.380037
EM: Round [24] log likelihood: -212900.346673
EM: Round [25] log likelihood: -212900.316453
EM: Round [26] log likelihood: -212900.288893
EM: Round [27] log likelihood: -212900.263610
EM: Round [28] log likelihood: -212900.240290
EM: Round [29] log likelihood: -212900.218680
EM: Round [30] log likelihood: -212900.198571
EM: Round [31] log likelihood: -212900.179788
EM: Round [32] log likelihood: -212900.162186
EM: Round [33] log likelihood: -212900.145642
EM: Round [34] log likelihood: -212900.130052
EM: Round [35] log likelihood: -212900.115327
EM: Round [36] log likelihood: -212900.101390
EM: Round [37] log likelihood: -212900.088175
EM: Round [38] log likelihood: -212900.075623
EM: Round [39] log likelihood: -212900.063683
EM: Round [40] log likelihood: -212900.052310
EM: Round [41] log likelihood: -212900.041465
EM: Round [42] log likelihood: -212900.031112
EM: Round [43] log likelihood: -212900.021219
EM: Round [44] log likelihood: -212900.011757
EM: Round [45] log likelihood: -212900.002701
EM: Round [46] log likelihood: -212899.994027
EM: Round [47] log likelihood: -212899.985713
EM: Round [48] log likelihood: -212899.977739
EM: Round [49] log likelihood: -212899.970088
EM: Round [50] log likelihood: -212899.962744
EM: Round [51] log likelihood: -212899.955689
EM: Round [52] log likelihood: -212899.948911
EM: Round [53] log likelihood: -212899.942396
EM: Round [54] log likelihood: -212899.936132
EM: Round [55] log likelihood: -212899.930106
EM: Round [56] log likelihood: -212899.924309
EM: Round [57] log likelihood: -212899.918729
EM: Round [58] log likelihood: -212899.913358
EM: Round [59] log likelihood: -212899.908186
EM: Round [60] log likelihood: -212899.903205
EM: Round [61] log likelihood: -212899.898407
EM: Round [62] log likelihood: -212899.893783
EM: Round [63] log likelihood: -212899.889328
EM: Round [64] log likelihood: -212899.885034
EM: Round [65] log likelihood: -212899.880894
EM: Round [66] log likelihood: -212899.876902
EM: Round [67] log likelihood: -212899.873053
EM: Round [68] log likelihood: -212899.869340
EM: Round [69] log likelihood: -212899.865759
EM: Round [70] log likelihood: -212899.862304
EM: Round [71] log likelihood: -212899.858971
EM: Round [72] log likelihood: -212899.855754
EM: Round [73] log likelihood: -212899.852650
EM: Round [74] log likelihood: -212899.849653
EM: Round [75] log likelihood: -212899.846761
EM: Round [76] log likelihood: -212899.843968
EM: Round [77] log likelihood: -212899.841272
EM: Round [78] log likelihood: -212899.838669
EM: Round [79] log likelihood: -212899.836155
EM: Round [80] log likelihood: -212899.833727
EM: Round [81] log likelihood: -212899.831382
EM: Round [82] log likelihood: -212899.829117
EM: Round [83] log likelihood: -212899.826929
EM: Round [84] log likelihood: -212899.824814
EM: Round [85] log likelihood: -212899.822772
EM: Round [86] log likelihood: -212899.820798
EM: Round [87] log likelihood: -212899.818891
EM: Round [88] log likelihood: -212899.817047
EM: Round [89] log likelihood: -212899.815266
EM: Round [90] log likelihood: -212899.813544
EM: Round [91] log likelihood: -212899.811879
EM: Round [92] log likelihood: -212899.810270
EM: Round [93] log likelihood: -212899.808715
EM: Round [94] log likelihood: -212899.807211
EM: Round [95] log likelihood: -212899.805757
EM: Round [96] log likelihood: -212899.804351
EM: Round [97] log likelihood: -212899.802991
EM: Round [98] log likelihood: -212899.801676
EM: Round [99] log likelihood: -212899.800405
EM: Round [100] log likelihood: -212899.799175
EM: Round [101] log likelihood: -212899.797985
EM: Round [102] log likelihood: -212899.796835
EM: Round [103] log likelihood: -212899.795722
EM: Round [104] log likelihood: -212899.794645
EM: Round [105] log likelihood: -212899.793603
EM: Round [106] log likelihood: -212899.792596
EM: Round [107] log likelihood: -212899.791621
EM: Round [108] log likelihood: -212899.790677
EM: Round [109] log likelihood: -212899.789764
EM: Round [110] log likelihood: -212899.788881
EM: Round [111] log likelihood: -212899.788026
EM: Round [112] log likelihood: -212899.787199
EM: Round [113] log likelihood: -212899.786398
EM: Round [114] log likelihood: -212899.785623
EM: Round [115] log likelihood: -212899.784874
EM: Round [116] log likelihood: -212899.784148
EM: Round [117] log likelihood: -212899.783445
EM: Round [118] log likelihood: -212899.782765
EM: Round [119] log likelihood: -212899.782106
EM: Round [120] log likelihood: -212899.781469
EM: Round [121] log likelihood: -212899.780852
EM: Round [122] log likelihood: -212899.780254
EM: Round [123] log likelihood: -212899.779676
EM: Round [124] log likelihood: -212899.779116
EM: Round [125] log likelihood: -212899.778574
EM: Round [126] log likelihood: -212899.778048
EM: Round [127] log likelihood: -212899.777540
EM: Round [128] log likelihood: -212899.777048
EM: Round [129] log likelihood: -212899.776571
EM: Round [130] log likelihood: -212899.776109
EM: Round [131] log likelihood: -212899.775662
EM: Round [132] log likelihood: -212899.775229
EM: Round [133] log likelihood: -212899.774810
EM: Round [134] log likelihood: -212899.774403
EM: Round [135] log likelihood: -212899.774010
EM: Round [136] log likelihood: -212899.773629
EM: Round [137] log likelihood: -212899.773260
EM: Round [138] log likelihood: -212899.772902
EM: Round [139] log likelihood: -212899.772556
EM: Round [140] log likelihood: -212899.772220
EM: Round [141] log likelihood: -212899.771895
EM: Round [142] log likelihood: -212899.771580
EM: Round [143] log likelihood: -212899.771275
EM: Round [144] log likelihood: -212899.770980
EM: Round [145] log likelihood: -212899.770693
EM: Round [146] log likelihood: -212899.770416
EM: Round [147] log likelihood: -212899.770147
EM: Round [148] log likelihood: -212899.769887
EM: Round [149] log likelihood: -212899.769634
EM: Round [150] log likelihood: -212899.769390
EM: Round [151] log likelihood: -212899.769153
EM: Round [152] log likelihood: -212899.768924
EM: Round [153] log likelihood: -212899.768701
EM: Round [154] log likelihood: -212899.768486
EM: Round [155] log likelihood: -212899.768277
EM: Round [156] log likelihood: -212899.768074
EM: Round [157] log likelihood: -212899.767878
EM: Round [158] log likelihood: -212899.767688
EM: Round [159] log likelihood: -212899.767504
EM: Round [160] log likelihood: -212899.767325
EM: Round [161] log likelihood: -212899.767152
EM: Round [162] log likelihood: -212899.766985
EM: Round [163] log likelihood: -212899.766822
EM: Round [164] log likelihood: -212899.766665
EM: Round [165] log likelihood: -212899.766512
EM: Round [166] log likelihood: -212899.766364
EM: Round [167] log likelihood: -212899.766221
EM: Round [168] log likelihood: -212899.766082
EM: Round [169] log likelihood: -212899.765947
EM: Round [170] log likelihood: -212899.765816
EM: Round [171] log likelihood: -212899.765690
EM: Round [172] log likelihood: -212899.765567
EM: Round [173] log likelihood: -212899.765448
EM: Round [174] log likelihood: -212899.765333
EM: Round [175] log likelihood: -212899.765221
EM: Round [176] log likelihood: -212899.765113
EM: Round [177] log likelihood: -212899.765008
EM: Round [178] log likelihood: -212899.764906
EM: Round [179] log likelihood: -212899.764807
EM: Stopping iterations at round 179 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.mr1TmT3HHI/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.mr1TmT3HHI/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.mr1TmT3HHI/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 146385162 > /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.mr1TmT3HHI/ctat_genome_lib_build_dir > /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.mr1TmT3HHI/ctat_genome_lib_build_dir --annotate /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.mr1TmT3HHI/ctat_genome_lib_build_dir
-done, see /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.mr1TmT3HHI/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1810, filtered: 10467)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.mr1TmT3HHI/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.mr1TmT3HHI/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000229925.1]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000233806.7]
WARNING, no entry stored in dbm for [ENSG00000220804.8]
WARNING, no entry stored in dbm for [ENSG00000287721.1]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000175676.15]
WARNING, no entry stored in dbm for [ENSG00000224186.8]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000228252.9]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000228252.9]
WARNING, no entry stored in dbm for [ENSG00000266952.2]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000235335.3]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [ENSG00000284977.2]
WARNING, no entry stored in dbm for [ENSG00000269842.5]
WARNING, no entry stored in dbm for [ENSG00000261375.1]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000165121.11]
WARNING, no entry stored in dbm for [ENSG00000230239.1]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000259755.1]
WARNING, no entry stored in dbm for [ENSG00000256029.6]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000267364.2]
WARNING, no entry stored in dbm for [ENSG00000186148.13]
WARNING, no entry stored in dbm for [ENSG00000239809.1]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000230937.12]
WARNING, no entry stored in dbm for [ENSG00000261365.1]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000262801.6]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000224011.1]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000078319.10]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000244257.5]
WARNING, no entry stored in dbm for [ENSG00000225764.2]
WARNING, no entry stored in dbm for [ENSG00000223891.6]
WARNING, no entry stored in dbm for [ENSG00000230140.7]
WARNING, no entry stored in dbm for [ENSG00000249492.2]
WARNING, no entry stored in dbm for [ENSG00000249752.1]
WARNING, no entry stored in dbm for [ENSG00000287148.1]
WARNING, no entry stored in dbm for [ENSG00000281903.2]
WARNING, no entry stored in dbm for [ENSG00000254101.7]
WARNING, no entry stored in dbm for [ENSG00000229891.2]
WARNING, no entry stored in dbm for [ENSG00000281404.2]
WARNING, no entry stored in dbm for [ENSG00000153363.13]
WARNING, no entry stored in dbm for [ENSG00000235448.3]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000279619.1]
WARNING, no entry stored in dbm for [ENSG00000116652.6]
WARNING, no entry stored in dbm for [ENSG00000271434.3]
WARNING, no entry stored in dbm for [ENSG00000267801.1]
WARNING, no entry stored in dbm for [ENSG00000225670.4]
WARNING, no entry stored in dbm for [ENSG00000260071.2]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000286214.1]
WARNING, no entry stored in dbm for [ENSG00000287708.1]
WARNING, no entry stored in dbm for [ENSG00000274602.5]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000267723.1]
WARNING, no entry stored in dbm for [ENSG00000260252.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000246225.7]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000237004.4]
WARNING, no entry stored in dbm for [ENSG00000249713.1]
WARNING, no entry stored in dbm for [ENSG00000228295.2]
WARNING, no entry stored in dbm for [ENSG00000268266.1]
WARNING, no entry stored in dbm for [ENSG00000242779.7]
WARNING, no entry stored in dbm for [ENSG00000267106.8]
WARNING, no entry stored in dbm for [ENSG00000273541.1]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000248452.2]
WARNING, no entry stored in dbm for [ENSG00000273032.3]
WARNING, no entry stored in dbm for [ENSG00000230927.3]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000256628.3]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000279927.1]
WARNING, no entry stored in dbm for [ENSG00000200922.1]
WARNING, no entry stored in dbm for [ENSG00000255282.6]
WARNING, no entry stored in dbm for [ENSG00000199568.1]
WARNING, no entry stored in dbm for [ENSG00000228775.8]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000272848.2]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [ENSG00000185596.16]
WARNING, no entry stored in dbm for [ENSG00000185596.16]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000270362.1]
WARNING, no entry stored in dbm for [ENSG00000203758.4]
WARNING, no entry stored in dbm for [ENSG00000249859.12]
WARNING, no entry stored in dbm for [ENSG00000244055.2]
WARNING, no entry stored in dbm for [ENSG00000180385.8]
WARNING, no entry stored in dbm for [ENSG00000243873.1]
WARNING, no entry stored in dbm for [ENSG00000251566.1]
WARNING, no entry stored in dbm for [ENSG00000241656.1]
WARNING, no entry stored in dbm for [ENSG00000263563.6]
WARNING, no entry stored in dbm for [ENSG00000278591.1]
WARNING, no entry stored in dbm for [ENSG00000275219.1]
WARNING, no entry stored in dbm for [ENSG00000274452.1]
WARNING, no entry stored in dbm for [ENSG00000274062.1]
WARNING, no entry stored in dbm for [ENSG00000274862.1]
WARNING, no entry stored in dbm for [ENSG00000278774.1]
WARNING, no entry stored in dbm for [ENSG00000277903.1]
WARNING, no entry stored in dbm for [ENSG00000276596.1]
WARNING, no entry stored in dbm for [ENSG00000278048.1]
WARNING, no entry stored in dbm for [ENSG00000274432.1]
WARNING, no entry stored in dbm for [ENSG00000273709.1]
WARNING, no entry stored in dbm for [ENSG00000275616.1]
WARNING, no entry stored in dbm for [ENSG00000255875.2]
WARNING, no entry stored in dbm for [ENSG00000254369.6]
WARNING, no entry stored in dbm for [ENSG00000228677.1]
WARNING, no entry stored in dbm for [ENSG00000270641.1]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000261270.1]
WARNING, no entry stored in dbm for [ENSG00000244158.1]
WARNING, no entry stored in dbm for [ENSG00000234500.1]
WARNING, no entry stored in dbm for [ENSG00000230781.1]
WARNING, no entry stored in dbm for [ENSG00000267121.6]
WARNING, no entry stored in dbm for [ENSG00000241336.2]
WARNING, no entry stored in dbm for [ENSG00000237126.8]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000262500.1]
WARNING, no entry stored in dbm for [ENSG00000247373.3]
WARNING, no entry stored in dbm for [ENSG00000237590.1]
WARNING, no entry stored in dbm for [ENSG00000269842.5]
WARNING, no entry stored in dbm for [ENSG00000229436.1]
WARNING, no entry stored in dbm for [ENSG00000234911.2]
WARNING, no entry stored in dbm for [ENSG00000235833.1]
WARNING, no entry stored in dbm for [ENSG00000230409.3]
WARNING, no entry stored in dbm for [ENSG00000128438.10]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000276868.1]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000248660.1]
WARNING, no entry stored in dbm for [ENSG00000249348.1]
WARNING, no entry stored in dbm for [ENSG00000231760.5]
WARNING, no entry stored in dbm for [ENSG00000249859.12]
WARNING, no entry stored in dbm for [ENSG00000250878.3]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000255717.7]
WARNING, no entry stored in dbm for [ENSG00000215162.2]
WARNING, no entry stored in dbm for [ENSG00000257746.2]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000214278.4]
WARNING, no entry stored in dbm for [ENSG00000218716.1]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000236810.6]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000262837.1]
WARNING, no entry stored in dbm for [ENSG00000258545.6]
WARNING, no entry stored in dbm for [ENSG00000259605.3]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000286511.1]
WARNING, no entry stored in dbm for [ENSG00000236343.1]
WARNING, no entry stored in dbm for [ENSG00000286099.1]
WARNING, no entry stored in dbm for [ENSG00000239922.2]
WARNING, no entry stored in dbm for [ENSG00000200156.1]
WARNING, no entry stored in dbm for [ENSG00000235139.2]
WARNING, no entry stored in dbm for [ENSG00000228956.8]
WARNING, no entry stored in dbm for [ENSG00000245275.8]
WARNING, no entry stored in dbm for [ENSG00000222012.1]
WARNING, no entry stored in dbm for [ENSG00000285867.1]
WARNING, no entry stored in dbm for [ENSG00000259446.6]
WARNING, no entry stored in dbm for [ENSG00000287882.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000213238.6]
WARNING, no entry stored in dbm for [ENSG00000227982.1]
WARNING, no entry stored in dbm for [ENSG00000240003.2]
WARNING, no entry stored in dbm for [ENSG00000241282.1]
WARNING, no entry stored in dbm for [ENSG00000229519.2]
WARNING, no entry stored in dbm for [ENSG00000231788.4]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000226407.1]
WARNING, no entry stored in dbm for [ENSG00000233012.2]
WARNING, no entry stored in dbm for [ENSG00000274585.1]
WARNING, no entry stored in dbm for [ENSG00000278771.1]
WARNING, no entry stored in dbm for [ENSG00000286410.1]
WARNING, no entry stored in dbm for [ENSG00000232995.7]
WARNING, no entry stored in dbm for [ENSG00000250230.3]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000231898.9]
WARNING, no entry stored in dbm for [ENSG00000246695.8]
WARNING, no entry stored in dbm for [ENSG00000233111.1]
WARNING, no entry stored in dbm for [ENSG00000177410.13]
WARNING, no entry stored in dbm for [ENSG00000233006.8]
WARNING, no entry stored in dbm for [ENSG00000226976.3]
WARNING, no entry stored in dbm for [ENSG00000249859.12]
WARNING, no entry stored in dbm for [ENSG00000269959.1]
WARNING, no entry stored in dbm for [ENSG00000277907.1]
WARNING, no entry stored in dbm for [ENSG00000268670.1]
WARNING, no entry stored in dbm for [ENSG00000259846.1]
WARNING, no entry stored in dbm for [ENSG00000237054.9]
WARNING, no entry stored in dbm for [ENSG00000231322.5]
WARNING, no entry stored in dbm for [ENSG00000250842.1]
WARNING, no entry stored in dbm for [ENSG00000221817.10]
WARNING, no entry stored in dbm for [ENSG00000235431.2]
WARNING, no entry stored in dbm for [ENSG00000285751.1]
WARNING, no entry stored in dbm for [ENSG00000255369.1]
WARNING, no entry stored in dbm for [ENSG00000067601.8]
WARNING, no entry stored in dbm for [ENSG00000229807.12]
WARNING, no entry stored in dbm for [ENSG00000242294.6]
WARNING, no entry stored in dbm for [ENSG00000273658.1]
WARNING, no entry stored in dbm for [ENSG00000255200.1]
WARNING, no entry stored in dbm for [ENSG00000260808.1]
WARNING, no entry stored in dbm for [ENSG00000220515.2]
WARNING, no entry stored in dbm for [ENSG00000234367.1]
WARNING, no entry stored in dbm for [ENSG00000270392.2]
WARNING, no entry stored in dbm for [ENSG00000270392.2]
WARNING, no entry stored in dbm for [ENSG00000233328.3]
WARNING, no entry stored in dbm for [ENSG00000230069.3]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000257259.3]
WARNING, no entry stored in dbm for [ENSG00000183444.10]
WARNING, no entry stored in dbm for [ENSG00000168992.4]
WARNING, no entry stored in dbm for [ENSG00000183444.10]
WARNING, no entry stored in dbm for [ENSG00000226461.3]
WARNING, no entry stored in dbm for [ENSG00000205746.9]
WARNING, no entry stored in dbm for [ENSG00000226328.7]
WARNING, no entry stored in dbm for [ENSG00000224596.8]
WARNING, no entry stored in dbm for [ENSG00000214807.2]
WARNING, no entry stored in dbm for [ENSG00000226703.1]
WARNING, no entry stored in dbm for [ENSG00000229338.1]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000232554.9]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000236276.2]
WARNING, no entry stored in dbm for [ENSG00000230316.7]
WARNING, no entry stored in dbm for [ENSG00000230563.4]
WARNING, no entry stored in dbm for [ENSG00000197927.13]
WARNING, no entry stored in dbm for [ENSG00000242423.2]
WARNING, no entry stored in dbm for [ENSG00000227632.2]
WARNING, no entry stored in dbm for [ENSG00000214900.11]
WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000251689.1]
WARNING, no entry stored in dbm for [ENSG00000220785.7]
WARNING, no entry stored in dbm for [ENSG00000215866.8]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000249328.3]
WARNING, no entry stored in dbm for [ENSG00000256037.1]
WARNING, no entry stored in dbm for [ENSG00000225421.2]
WARNING, no entry stored in dbm for [ENSG00000280109.3]
WARNING, no entry stored in dbm for [ENSG00000269929.3]
WARNING, no entry stored in dbm for [ENSG00000215386.13]
WARNING, no entry stored in dbm for [ENSG00000233006.8]
WARNING, no entry stored in dbm for [ENSG00000283240.1]
WARNING, no entry stored in dbm for [ENSG00000229641.1]
WARNING, no entry stored in dbm for [ENSG00000250159.7]
WARNING, no entry stored in dbm for [ENSG00000214765.8]
WARNING, no entry stored in dbm for [ENSG00000224887.1]
WARNING, no entry stored in dbm for [ENSG00000254394.2]
WARNING, no entry stored in dbm for [ENSG00000264589.4]
WARNING, no entry stored in dbm for [ENSG00000277631.5]
WARNING, no entry stored in dbm for [ENSG00000244227.7]
WARNING, no entry stored in dbm for [ENSG00000215835.2]
WARNING, no entry stored in dbm for [ENSG00000285571.1]
WARNING, no entry stored in dbm for [ENSG00000213904.9]
WARNING, no entry stored in dbm for [ENSG00000257139.1]
WARNING, no entry stored in dbm for [ENSG00000261761.5]
WARNING, no entry stored in dbm for [ENSG00000226791.7]
WARNING, no entry stored in dbm for [ENSG00000226791.7]
WARNING, no entry stored in dbm for [ENSG00000250754.6]
WARNING, no entry stored in dbm for [ENSG00000250358.6]
WARNING, no entry stored in dbm for [ENSG00000234589.4]
WARNING, no entry stored in dbm for [ENSG00000260186.5]
WARNING, no entry stored in dbm for [ENSG00000250127.1]
WARNING, no entry stored in dbm for [ENSG00000254101.7]
WARNING, no entry stored in dbm for [ENSG00000226508.1]
WARNING, no entry stored in dbm for [ENSG00000258754.8]
WARNING, no entry stored in dbm for [ENSG00000281327.2]
WARNING, no entry stored in dbm for [ENSG00000237667.7]
WARNING, no entry stored in dbm for [ENSG00000282508.2]
WARNING, no entry stored in dbm for [ENSG00000235687.9]
WARNING, no entry stored in dbm for [ENSG00000235687.9]
WARNING, no entry stored in dbm for [ENSG00000235687.9]
WARNING, no entry stored in dbm for [ENSG00000235687.9]
WARNING, no entry stored in dbm for [ENSG00000226567.2]
WARNING, no entry stored in dbm for [ENSG00000227036.8]
WARNING, no entry stored in dbm for [ENSG00000233237.8]
WARNING, no entry stored in dbm for [ENSG00000283945.1]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000277215.2]
WARNING, no entry stored in dbm for [ENSG00000215333.3]
WARNING, no entry stored in dbm for [ENSG00000235559.1]
WARNING, no entry stored in dbm for [ENSG00000255391.1]
WARNING, no entry stored in dbm for [ENSG00000229696.1]
WARNING, no entry stored in dbm for [ENSG00000260776.6]
WARNING, no entry stored in dbm for [ENSG00000237807.4]
WARNING, no entry stored in dbm for [ENSG00000223374.1]
WARNING, no entry stored in dbm for [ENSG00000226648.2]
WARNING, no entry stored in dbm for [ENSG00000170983.4]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000180229.12]
WARNING, no entry stored in dbm for [ENSG00000165874.13]
WARNING, no entry stored in dbm for [ENSG00000250742.4]
WARNING, no entry stored in dbm for [ENSG00000256779.2]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000230946.3]
WARNING, no entry stored in dbm for [ENSG00000211459.2]
WARNING, no entry stored in dbm for [ENSG00000205790.1]
WARNING, no entry stored in dbm for [ENSG00000279744.1]
WARNING, no entry stored in dbm for [ENSG00000167494.9]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000227038.3]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000255199.2]
WARNING, no entry stored in dbm for [ENSG00000235954.7]
WARNING, no entry stored in dbm for [ENSG00000286481.1]
WARNING, no entry stored in dbm for [ENSG00000226567.2]
WARNING, no entry stored in dbm for [ENSG00000250585.3]
WARNING, no entry stored in dbm for [ENSG00000242299.1]
WARNING, no entry stored in dbm for [ENSG00000250959.2]
WARNING, no entry stored in dbm for [ENSG00000250959.2]
WARNING, no entry stored in dbm for [ENSG00000250959.2]
WARNING, no entry stored in dbm for [ENSG00000240859.3]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000203801.8]
WARNING, no entry stored in dbm for [ENSG00000283544.1]
WARNING, no entry stored in dbm for [ENSG00000235652.9]
WARNING, no entry stored in dbm for [ENSG00000266594.1]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000248429.5]
WARNING, no entry stored in dbm for [ENSG00000214886.4]
WARNING, no entry stored in dbm for [ENSG00000256802.2]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000234709.2]
WARNING, no entry stored in dbm for [ENSG00000242641.6]
WARNING, no entry stored in dbm for [ENSG00000235110.5]
WARNING, no entry stored in dbm for [ENSG00000286662.2]
WARNING, no entry stored in dbm for [ENSG00000264044.1]
WARNING, no entry stored in dbm for [ENSG00000286176.2]
WARNING, no entry stored in dbm for [ENSG00000234152.1]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000179523.5]
WARNING, no entry stored in dbm for [ENSG00000286710.1]
WARNING, no entry stored in dbm for [ENSG00000280739.3]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000223668.1]
WARNING, no entry stored in dbm for [ENSG00000282164.3]
WARNING, no entry stored in dbm for [ENSG00000242622.2]
WARNING, no entry stored in dbm for [ENSG00000236700.6]
WARNING, no entry stored in dbm for [ENSG00000256029.6]
WARNING, no entry stored in dbm for [ENSG00000226741.2]
WARNING, no entry stored in dbm for [ENSG00000233531.1]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000258498.8]
WARNING, no entry stored in dbm for [ENSG00000236283.5]
WARNING, no entry stored in dbm for [ENSG00000257612.2]
WARNING, no entry stored in dbm for [ENSG00000273599.1]
WARNING, no entry stored in dbm for [ENSG00000231890.8]
WARNING, no entry stored in dbm for [ENSG00000235054.4]
WARNING, no entry stored in dbm for [ENSG00000227684.2]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000232973.13]
WARNING, no entry stored in dbm for [ENSG00000262533.1]
WARNING, no entry stored in dbm for [ENSG00000283613.1]
WARNING, no entry stored in dbm for [ENSG00000254815.6]
WARNING, no entry stored in dbm for [ENSG00000229431.1]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000228084.1]
WARNING, no entry stored in dbm for [ENSG00000237773.7]
WARNING, no entry stored in dbm for [ENSG00000231336.1]
WARNING, no entry stored in dbm for [ENSG00000267124.2]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000287211.1]
WARNING, no entry stored in dbm for [ENSG00000236452.1]
WARNING, no entry stored in dbm for [ENSG00000223960.7]
WARNING, no entry stored in dbm for [ENSG00000233873.1]
WARNING, no entry stored in dbm for [ENSG00000231980.1]
WARNING, no entry stored in dbm for [ENSG00000285280.2]
WARNING, no entry stored in dbm for [ENSG00000240738.1]
WARNING, no entry stored in dbm for [ENSG00000256955.2]
WARNING, no entry stored in dbm for [ENSG00000205771.6]
WARNING, no entry stored in dbm for [ENSG00000166763.8]
WARNING, no entry stored in dbm for [ENSG00000249375.8]
WARNING, no entry stored in dbm for [ENSG00000188511.12]
WARNING, no entry stored in dbm for [ENSG00000260862.1]
WARNING, no entry stored in dbm for [ENSG00000215146.5]
WARNING, no entry stored in dbm for [ENSG00000226445.2]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000240089.2]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000255300.6]
WARNING, no entry stored in dbm for [ENSG00000197180.2]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000231329.8]
WARNING, no entry stored in dbm for [ENSG00000233343.1]
WARNING, no entry stored in dbm for [ENSG00000203865.11]
WARNING, no entry stored in dbm for [ENSG00000237356.7]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000255540.1]
WARNING, no entry stored in dbm for [ENSG00000254990.5]
WARNING, no entry stored in dbm for [ENSG00000234034.1]
WARNING, no entry stored in dbm for [ENSG00000241838.3]
WARNING, no entry stored in dbm for [ENSG00000224427.1]
WARNING, no entry stored in dbm for [ENSG00000249330.3]
WARNING, no entry stored in dbm for [ENSG00000237636.3]
WARNING, no entry stored in dbm for [ENSG00000228980.4]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000264958.2]
WARNING, no entry stored in dbm for [ENSG00000288107.1]
WARNING, no entry stored in dbm for [ENSG00000231964.1]
WARNING, no entry stored in dbm for [ENSG00000182021.10]
WARNING, no entry stored in dbm for [ENSG00000204802.3]
WARNING, no entry stored in dbm for [ENSG00000231212.1]
WARNING, no entry stored in dbm for [ENSG00000238260.1]
WARNING, no entry stored in dbm for [ENSG00000229672.3]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000217801.10]
WARNING, no entry stored in dbm for [ENSG00000287807.1]
WARNING, no entry stored in dbm for [ENSG00000280222.1]
WARNING, no entry stored in dbm for [ENSG00000286551.1]
WARNING, no entry stored in dbm for [ENSG00000258458.8]
WARNING, no entry stored in dbm for [ENSG00000226842.1]
WARNING, no entry stored in dbm for [ENSG00000226987.1]
WARNING, no entry stored in dbm for [ENSG00000136149.6]
WARNING, no entry stored in dbm for [ENSG00000197670.6]
WARNING, no entry stored in dbm for [ENSG00000234694.1]
WARNING, no entry stored in dbm for [ENSG00000228436.3]
WARNING, no entry stored in dbm for [ENSG00000237596.7]
WARNING, no entry stored in dbm for [ENSG00000283773.1]
WARNING, no entry stored in dbm for [ENSG00000283773.1]
WARNING, no entry stored in dbm for [ENSG00000287449.1]
WARNING, no entry stored in dbm for [ENSG00000287708.1]
WARNING, no entry stored in dbm for [ENSG00000274602.5]
WARNING, no entry stored in dbm for [ENSG00000253194.2]
WARNING, no entry stored in dbm for [ENSG00000279286.2]
WARNING, no entry stored in dbm for [ENSG00000230387.4]
WARNING, no entry stored in dbm for [ENSG00000230387.4]
WARNING, no entry stored in dbm for [ENSG00000230387.4]
WARNING, no entry stored in dbm for [ENSG00000230387.4]
WARNING, no entry stored in dbm for [ENSG00000230387.4]
WARNING, no entry stored in dbm for [ENSG00000286540.1]
WARNING, no entry stored in dbm for [ENSG00000257976.1]
WARNING, no entry stored in dbm for [ENSG00000256747.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000231113.2]
WARNING, no entry stored in dbm for [ENSG00000284708.1]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000286652.1]
WARNING, no entry stored in dbm for [ENSG00000285887.1]
WARNING, no entry stored in dbm for [ENSG00000205853.12]
WARNING, no entry stored in dbm for [ENSG00000207208.1]
WARNING, no entry stored in dbm for [ENSG00000200917.1]
WARNING, no entry stored in dbm for [ENSG00000287620.1]
WARNING, no entry stored in dbm for [ENSG00000272734.1]
WARNING, no entry stored in dbm for [ENSG00000226482.1]
WARNING, no entry stored in dbm for [ENSG00000268758.7]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000223509.8]
WARNING, no entry stored in dbm for [ENSG00000278133.1]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000271002.1]
WARNING, no entry stored in dbm for [ENSG00000283345.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000250899.3]
WARNING, no entry stored in dbm for [ENSG00000286103.1]
WARNING, no entry stored in dbm for [ENSG00000268081.1]
WARNING, no entry stored in dbm for [ENSG00000255366.1]
WARNING, no entry stored in dbm for [ENSG00000228043.5]
WARNING, no entry stored in dbm for [ENSG00000235421.1]
WARNING, no entry stored in dbm for [ENSG00000235421.1]
WARNING, no entry stored in dbm for [ENSG00000278791.1]
WARNING, no entry stored in dbm for [ENSG00000278791.1]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000287552.1]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000287067.1]
WARNING, no entry stored in dbm for [ENSG00000273724.1]
WARNING, no entry stored in dbm for [ENSG00000286436.1]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000242197.2]
WARNING, no entry stored in dbm for [ENSG00000277096.1]
WARNING, no entry stored in dbm for [ENSG00000253281.7]
WARNING, no entry stored in dbm for [ENSG00000236773.1]
WARNING, no entry stored in dbm for [ENSG00000261824.7]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000260290.2]
WARNING, no entry stored in dbm for [ENSG00000287995.1]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000265750.1]
WARNING, no entry stored in dbm for [ENSG00000267686.2]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000280362.1]
WARNING, no entry stored in dbm for [ENSG00000282508.2]
WARNING, no entry stored in dbm for [ENSG00000257225.1]
WARNING, no entry stored in dbm for [ENSG00000214485.6]
WARNING, no entry stored in dbm for [ENSG00000286935.1]
WARNING, no entry stored in dbm for [ENSG00000259511.3]
WARNING, no entry stored in dbm for [ENSG00000286705.1]
WARNING, no entry stored in dbm for [ENSG00000257303.2]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000283537.2]
WARNING, no entry stored in dbm for [ENSG00000239985.2]
WARNING, no entry stored in dbm for [ENSG00000227113.2]
WARNING, no entry stored in dbm for [ENSG00000228409.6]
WARNING, no entry stored in dbm for [ENSG00000253361.3]
WARNING, no entry stored in dbm for [ENSG00000287388.1]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000254951.7]
WARNING, no entry stored in dbm for [ENSG00000223727.6]
WARNING, no entry stored in dbm for [ENSG00000259354.5]
WARNING, no entry stored in dbm for [ENSG00000255621.1]
WARNING, no entry stored in dbm for [ENSG00000261303.6]
WARNING, no entry stored in dbm for [ENSG00000277561.5]
WARNING, no entry stored in dbm for [ENSG00000270002.1]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000259407.1]
WARNING, no entry stored in dbm for [ENSG00000259407.1]
WARNING, no entry stored in dbm for [ENSG00000213963.6]
WARNING, no entry stored in dbm for [ENSG00000259675.2]
WARNING, no entry stored in dbm for [ENSG00000241556.1]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000184319.16]
WARNING, no entry stored in dbm for [ENSG00000249406.3]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000213293.4]
WARNING, no entry stored in dbm for [ENSG00000257453.1]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000241281.1]
WARNING, no entry stored in dbm for [ENSG00000253133.2]
WARNING, no entry stored in dbm for [ENSG00000259972.3]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000262211.1]
WARNING, no entry stored in dbm for [ENSG00000232871.8]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000250258.1]
WARNING, no entry stored in dbm for [ENSG00000248103.1]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000236003.1]
WARNING, no entry stored in dbm for [ENSG00000284959.2]
WARNING, no entry stored in dbm for [ENSG00000239701.1]
WARNING, no entry stored in dbm for [ENSG00000271500.1]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000248618.1]
WARNING, no entry stored in dbm for [ENSG00000284060.1]
WARNING, no entry stored in dbm for [ENSG00000284130.1]
WARNING, no entry stored in dbm for [ENSG00000267328.1]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000228252.9]
WARNING, no entry stored in dbm for [ENSG00000242908.6]
* STAR-Fusion complete. See output: /tmp/nxf.mr1TmT3HHI/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)