File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9c/ce718bf930bc0dc3880e21a9a0c407/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:27:00
                             Started mapping on |	Jun 08 10:34:08
                                    Finished on |	Jun 08 12:14:48
       Mapping speed, Million of reads per hour |	176.64

                          Number of input reads |	296362499
                      Average input read length |	269
                                    UNIQUE READS:
                   Uniquely mapped reads number |	283697024
                        Uniquely mapped reads % |	95.73%
                          Average mapped length |	268.77
                       Number of splices: Total |	322121745
            Number of splices: Annotated (sjdb) |	316872043
                       Number of splices: GT/AG |	318255428
                       Number of splices: GC/AG |	2411222
                       Number of splices: AT/AC |	274573
               Number of splices: Non-canonical |	1180522
                      Mismatch rate per base, % |	0.18%
                         Deletion rate per base |	0.02%
                        Deletion average length |	1.99
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.72
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	8615741
             % of reads mapped to multiple loci |	2.91%
        Number of reads mapped to too many loci |	371509
             % of reads mapped to too many loci |	0.13%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2842467
                 % of reads unmapped: too short |	0.96%
                Number of reads unmapped: other |	835758
                     % of reads unmapped: other |	0.28%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%