File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/28/45c516006bcaf2e05fece48de4da80/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 09:52:09
                             Started mapping on |	Jun 08 09:58:49
                                    Finished on |	Jun 08 10:57:33
       Mapping speed, Million of reads per hour |	302.30

                          Number of input reads |	295919103
                      Average input read length |	264
                                    UNIQUE READS:
                   Uniquely mapped reads number |	283259012
                        Uniquely mapped reads % |	95.72%
                          Average mapped length |	263.44
                       Number of splices: Total |	339037726
            Number of splices: Annotated (sjdb) |	334070792
                       Number of splices: GT/AG |	334955576
                       Number of splices: GC/AG |	2591500
                       Number of splices: AT/AC |	272872
               Number of splices: Non-canonical |	1217778
                      Mismatch rate per base, % |	0.22%
                         Deletion rate per base |	0.02%
                        Deletion average length |	1.95
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.54
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	8840441
             % of reads mapped to multiple loci |	2.99%
        Number of reads mapped to too many loci |	815358
             % of reads mapped to too many loci |	0.28%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2740220
                 % of reads unmapped: too short |	0.93%
                Number of reads unmapped: other |	264072
                     % of reads unmapped: other |	0.09%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%