Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6f/1213c1c91a3c503a4b93430f2d0a50/tih_rna_sample_00685_B23MVV7LT4_1.Chimeric.out.junction
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/2eb57179e7df3b96913014982657af/tih_rna_sample_00685_B23MVV7LT4_1_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/42/cfe9da031fcf0119fe690d35f340a4/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/2eb57179e7df3b96913014982657af/tih_rna_sample_00685_B23MVV7LT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/42/cfe9da031fcf0119fe690d35f340a4/.command.run
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.T7iQ8L1Rvu/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.T7iQ8L1Rvu/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary
-sample contains 136418894 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.T7iQ8L1Rvu/ctat_genome_lib_build_dir  -J /tmp/nxf.T7iQ8L1Rvu/tih_rna_sample_00685_B23MVV7LT4_1.Chimeric.out.junction  -O /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.T7iQ8L1Rvu/tih_rna_sample_00685_B23MVV7LT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.T7iQ8L1Rvu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[1250000], rate=30864.20/min -building interval tree based on /tmp/nxf.T7iQ8L1Rvu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[1250000], rate=28582.32/min -building interval tree based on /tmp/nxf.T7iQ8L1Rvu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[1240000], rate=28246.01/min -building interval tree based on /tmp/nxf.T7iQ8L1Rvu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[1240000], rate=18388.53/min 
[1250000], rate=18400.39/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.T7iQ8L1Rvu/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
 6000000.00 reads per min processed...  
 3600000.00 reads per min processed...  
 3000000.00 reads per min processed...  
 2727272.73 reads per min processed...  
 2571428.57 reads per min processed...  
 2625000.00 reads per min processed...  
 2526315.79 reads per min processed...  
 2454545.45 reads per min processed...  
 2500000.00 reads per min processed...  
 2444444.44 reads per min processed...  
 2400000.00 reads per min processed...  
 2294117.65 reads per min processed...  
 2333333.33 reads per min processed...  
 2368421.05 reads per min processed...  
 2400000.00 reads per min processed...  
 2428571.43 reads per min processed...  
 2511627.91 reads per min processed...  
 2478260.87 reads per min processed...  
 2500000.00 reads per min processed...  
 2470588.24 reads per min processed...  
 2444444.44 reads per min processed...  
 2464285.71 reads per min processed...  
 2526315.79 reads per min processed...  
 2542372.88 reads per min processed...  
 2516129.03 reads per min processed...  
 2492307.69 reads per min processed...  
 2507462.69 reads per min processed...  
 2485714.29 reads per min processed...  
 2500000.00 reads per min processed...  
 2480000.00 reads per min processed...  
 2461538.46 reads per min processed...  
 2475000.00 reads per min processed...  
 2457831.33 reads per min processed...  
 2441860.47 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.T7iQ8L1Rvu/tih_rna_sample_00685_B23MVV7LT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.T7iQ8L1Rvu/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -363026.488209
EM: Round [1] log likelihood: -362877.318651
EM: Round [2] log likelihood: -362821.524784
EM: Round [3] log likelihood: -362795.026153
EM: Round [4] log likelihood: -362780.936439
EM: Round [5] log likelihood: -362772.887439
EM: Round [6] log likelihood: -362768.017989
EM: Round [7] log likelihood: -362764.914368
EM: Round [8] log likelihood: -362762.837730
EM: Round [9] log likelihood: -362761.385211
EM: Round [10] log likelihood: -362760.328306
EM: Round [11] log likelihood: -362759.532270
EM: Round [12] log likelihood: -362758.914580
EM: Round [13] log likelihood: -362758.422833
EM: Round [14] log likelihood: -362758.022618
EM: Round [15] log likelihood: -362757.690631
EM: Round [16] log likelihood: -362757.410649
EM: Round [17] log likelihood: -362757.171100
EM: Round [18] log likelihood: -362756.963547
EM: Round [19] log likelihood: -362756.781723
EM: Round [20] log likelihood: -362756.620890
EM: Round [21] log likelihood: -362756.477412
EM: Round [22] log likelihood: -362756.348457
EM: Round [23] log likelihood: -362756.231792
EM: Round [24] log likelihood: -362756.125636
EM: Round [25] log likelihood: -362756.028548
EM: Round [26] log likelihood: -362755.939353
EM: Round [27] log likelihood: -362755.857081
EM: Round [28] log likelihood: -362755.780927
EM: Round [29] log likelihood: -362755.710211
EM: Round [30] log likelihood: -362755.644359
EM: Round [31] log likelihood: -362755.582880
EM: Round [32] log likelihood: -362755.525354
EM: Round [33] log likelihood: -362755.471413
EM: Round [34] log likelihood: -362755.420740
EM: Round [35] log likelihood: -362755.373055
EM: Round [36] log likelihood: -362755.328112
EM: Round [37] log likelihood: -362755.285692
EM: Round [38] log likelihood: -362755.245602
EM: Round [39] log likelihood: -362755.207668
EM: Round [40] log likelihood: -362755.171734
EM: Round [41] log likelihood: -362755.137660
EM: Round [42] log likelihood: -362755.105318
EM: Round [43] log likelihood: -362755.074595
EM: Round [44] log likelihood: -362755.045384
EM: Round [45] log likelihood: -362755.017590
EM: Round [46] log likelihood: -362754.991126
EM: Round [47] log likelihood: -362754.965912
EM: Round [48] log likelihood: -362754.941873
EM: Round [49] log likelihood: -362754.918942
EM: Round [50] log likelihood: -362754.897056
EM: Round [51] log likelihood: -362754.876157
EM: Round [52] log likelihood: -362754.856191
EM: Round [53] log likelihood: -362754.837108
EM: Round [54] log likelihood: -362754.818861
EM: Round [55] log likelihood: -362754.801407
EM: Round [56] log likelihood: -362754.784705
EM: Round [57] log likelihood: -362754.768718
EM: Round [58] log likelihood: -362754.753409
EM: Round [59] log likelihood: -362754.738746
EM: Round [60] log likelihood: -362754.724698
EM: Round [61] log likelihood: -362754.711234
EM: Round [62] log likelihood: -362754.698328
EM: Round [63] log likelihood: -362754.685952
EM: Round [64] log likelihood: -362754.674084
EM: Round [65] log likelihood: -362754.662698
EM: Round [66] log likelihood: -362754.651775
EM: Round [67] log likelihood: -362754.641292
EM: Round [68] log likelihood: -362754.631230
EM: Round [69] log likelihood: -362754.621571
EM: Round [70] log likelihood: -362754.612296
EM: Round [71] log likelihood: -362754.603390
EM: Round [72] log likelihood: -362754.594836
EM: Round [73] log likelihood: -362754.586619
EM: Round [74] log likelihood: -362754.578725
EM: Round [75] log likelihood: -362754.571140
EM: Round [76] log likelihood: -362754.563851
EM: Round [77] log likelihood: -362754.556846
EM: Round [78] log likelihood: -362754.550113
EM: Round [79] log likelihood: -362754.543641
EM: Round [80] log likelihood: -362754.537418
EM: Round [81] log likelihood: -362754.531436
EM: Round [82] log likelihood: -362754.525683
EM: Round [83] log likelihood: -362754.520151
EM: Round [84] log likelihood: -362754.514830
EM: Round [85] log likelihood: -362754.509713
EM: Round [86] log likelihood: -362754.504791
EM: Round [87] log likelihood: -362754.500056
EM: Round [88] log likelihood: -362754.495500
EM: Round [89] log likelihood: -362754.491118
EM: Round [90] log likelihood: -362754.486901
EM: Round [91] log likelihood: -362754.482844
EM: Round [92] log likelihood: -362754.478939
EM: Round [93] log likelihood: -362754.475182
EM: Round [94] log likelihood: -362754.471565
EM: Round [95] log likelihood: -362754.468085
EM: Round [96] log likelihood: -362754.464735
EM: Round [97] log likelihood: -362754.461510
EM: Round [98] log likelihood: -362754.458407
EM: Round [99] log likelihood: -362754.455419
EM: Round [100] log likelihood: -362754.452542
EM: Round [101] log likelihood: -362754.449773
EM: Round [102] log likelihood: -362754.447106
EM: Round [103] log likelihood: -362754.444539
EM: Round [104] log likelihood: -362754.442067
EM: Round [105] log likelihood: -362754.439687
EM: Round [106] log likelihood: -362754.437395
EM: Round [107] log likelihood: -362754.435188
EM: Round [108] log likelihood: -362754.433063
EM: Round [109] log likelihood: -362754.431016
EM: Round [110] log likelihood: -362754.429045
EM: Round [111] log likelihood: -362754.427146
EM: Round [112] log likelihood: -362754.425318
EM: Round [113] log likelihood: -362754.423557
EM: Round [114] log likelihood: -362754.421860
EM: Round [115] log likelihood: -362754.420226
EM: Round [116] log likelihood: -362754.418652
EM: Round [117] log likelihood: -362754.417136
EM: Round [118] log likelihood: -362754.415676
EM: Round [119] log likelihood: -362754.414269
EM: Round [120] log likelihood: -362754.412913
EM: Round [121] log likelihood: -362754.411608
EM: Round [122] log likelihood: -362754.410350
EM: Round [123] log likelihood: -362754.409138
EM: Round [124] log likelihood: -362754.407970
EM: Round [125] log likelihood: -362754.406845
EM: Round [126] log likelihood: -362754.405761
EM: Round [127] log likelihood: -362754.404717
EM: Round [128] log likelihood: -362754.403711
EM: Round [129] log likelihood: -362754.402741
EM: Round [130] log likelihood: -362754.401807
EM: Round [131] log likelihood: -362754.400907
EM: Round [132] log likelihood: -362754.400040
EM: Round [133] log likelihood: -362754.399204
EM: Round [134] log likelihood: -362754.398398
EM: Round [135] log likelihood: -362754.397622
EM: Round [136] log likelihood: -362754.396874
EM: Round [137] log likelihood: -362754.396153
EM: Round [138] log likelihood: -362754.395459
EM: Round [139] log likelihood: -362754.394789
EM: Round [140] log likelihood: -362754.394144
EM: Round [141] log likelihood: -362754.393522
EM: Round [142] log likelihood: -362754.392923
EM: Round [143] log likelihood: -362754.392345
EM: Round [144] log likelihood: -362754.391789
EM: Round [145] log likelihood: -362754.391252
EM: Round [146] log likelihood: -362754.390735
EM: Round [147] log likelihood: -362754.390236
EM: Round [148] log likelihood: -362754.389756
EM: Round [149] log likelihood: -362754.389293
EM: Round [150] log likelihood: -362754.388847
EM: Round [151] log likelihood: -362754.388416
EM: Round [152] log likelihood: -362754.388002
EM: Round [153] log likelihood: -362754.387602
EM: Round [154] log likelihood: -362754.387217
EM: Round [155] log likelihood: -362754.386845
EM: Round [156] log likelihood: -362754.386487
EM: Round [157] log likelihood: -362754.386142
EM: Round [158] log likelihood: -362754.385809
EM: Round [159] log likelihood: -362754.385489
EM: Round [160] log likelihood: -362754.385179
EM: Round [161] log likelihood: -362754.384881
EM: Round [162] log likelihood: -362754.384594
EM: Round [163] log likelihood: -362754.384317
EM: Round [164] log likelihood: -362754.384050
EM: Round [165] log likelihood: -362754.383792
EM: Round [166] log likelihood: -362754.383544
EM: Round [167] log likelihood: -362754.383305
EM: Round [168] log likelihood: -362754.383074
EM: Round [169] log likelihood: -362754.382852
EM: Round [170] log likelihood: -362754.382637
EM: Round [171] log likelihood: -362754.382430
EM: Round [172] log likelihood: -362754.382231
EM: Round [173] log likelihood: -362754.382039
EM: Round [174] log likelihood: -362754.381853
EM: Round [175] log likelihood: -362754.381674
EM: Round [176] log likelihood: -362754.381502
EM: Round [177] log likelihood: -362754.381336
EM: Round [178] log likelihood: -362754.381175
EM: Round [179] log likelihood: -362754.381021
EM: Round [180] log likelihood: -362754.380872
EM: Round [181] log likelihood: -362754.380728
EM: Round [182] log likelihood: -362754.380590
EM: Round [183] log likelihood: -362754.380456
EM: Round [184] log likelihood: -362754.380327
EM: Round [185] log likelihood: -362754.380203
EM: Round [186] log likelihood: -362754.380083
EM: Round [187] log likelihood: -362754.379967
EM: Round [188] log likelihood: -362754.379856
EM: Round [189] log likelihood: -362754.379748
EM: Round [190] log likelihood: -362754.379645
EM: Round [191] log likelihood: -362754.379545
EM: Round [192] log likelihood: -362754.379448
EM: Stopping iterations at round 192 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -361929.114272
EM: Round [1] log likelihood: -361804.862416
EM: Round [2] log likelihood: -361760.829298
EM: Round [3] log likelihood: -361741.052321
EM: Round [4] log likelihood: -361731.062083
EM: Round [5] log likelihood: -361725.622641
EM: Round [6] log likelihood: -361722.482565
EM: Round [7] log likelihood: -361720.571989
EM: Round [8] log likelihood: -361719.349663
EM: Round [9] log likelihood: -361718.529061
EM: Round [10] log likelihood: -361717.952599
EM: Round [11] log likelihood: -361717.530493
EM: Round [12] log likelihood: -361717.209820
EM: Round [13] log likelihood: -361716.958317
EM: Round [14] log likelihood: -361716.755653
EM: Round [15] log likelihood: -361716.588588
EM: Round [16] log likelihood: -361716.448228
EM: Round [17] log likelihood: -361716.328417
EM: Round [18] log likelihood: -361716.224771
EM: Round [19] log likelihood: -361716.134091
EM: Round [20] log likelihood: -361716.053987
EM: Round [21] log likelihood: -361715.982638
EM: Round [22] log likelihood: -361715.918628
EM: Round [23] log likelihood: -361715.860839
EM: Round [24] log likelihood: -361715.808375
EM: Round [25] log likelihood: -361715.760509
EM: Round [26] log likelihood: -361715.716645
EM: Round [27] log likelihood: -361715.676286
EM: Round [28] log likelihood: -361715.639018
EM: Round [29] log likelihood: -361715.604491
EM: Round [30] log likelihood: -361715.572407
EM: Round [31] log likelihood: -361715.542509
EM: Round [32] log likelihood: -361715.514579
EM: Round [33] log likelihood: -361715.488426
EM: Round [34] log likelihood: -361715.463884
EM: Round [35] log likelihood: -361715.440808
EM: Round [36] log likelihood: -361715.419070
EM: Round [37] log likelihood: -361715.398558
EM: Round [38] log likelihood: -361715.379172
EM: Round [39] log likelihood: -361715.360824
EM: Round [40] log likelihood: -361715.343433
EM: Round [41] log likelihood: -361715.326930
EM: Round [42] log likelihood: -361715.311251
EM: Round [43] log likelihood: -361715.296338
EM: Round [44] log likelihood: -361715.282140
EM: Round [45] log likelihood: -361715.268610
EM: Round [46] log likelihood: -361715.255705
EM: Round [47] log likelihood: -361715.243387
EM: Round [48] log likelihood: -361715.231619
EM: Round [49] log likelihood: -361715.220369
EM: Round [50] log likelihood: -361715.209609
EM: Round [51] log likelihood: -361715.199309
EM: Round [52] log likelihood: -361715.189445
EM: Round [53] log likelihood: -361715.179993
EM: Round [54] log likelihood: -361715.170933
EM: Round [55] log likelihood: -361715.162242
EM: Round [56] log likelihood: -361715.153904
EM: Round [57] log likelihood: -361715.145901
EM: Round [58] log likelihood: -361715.138215
EM: Round [59] log likelihood: -361715.130833
EM: Round [60] log likelihood: -361715.123739
EM: Round [61] log likelihood: -361715.116922
EM: Round [62] log likelihood: -361715.110367
EM: Round [63] log likelihood: -361715.104063
EM: Round [64] log likelihood: -361715.097999
EM: Round [65] log likelihood: -361715.092165
EM: Round [66] log likelihood: -361715.086551
EM: Round [67] log likelihood: -361715.081147
EM: Round [68] log likelihood: -361715.075944
EM: Round [69] log likelihood: -361715.070935
EM: Round [70] log likelihood: -361715.066111
EM: Round [71] log likelihood: -361715.061464
EM: Round [72] log likelihood: -361715.056988
EM: Round [73] log likelihood: -361715.052675
EM: Round [74] log likelihood: -361715.048519
EM: Round [75] log likelihood: -361715.044515
EM: Round [76] log likelihood: -361715.040655
EM: Round [77] log likelihood: -361715.036934
EM: Round [78] log likelihood: -361715.033348
EM: Round [79] log likelihood: -361715.029890
EM: Round [80] log likelihood: -361715.026556
EM: Round [81] log likelihood: -361715.023341
EM: Round [82] log likelihood: -361715.020241
EM: Round [83] log likelihood: -361715.017252
EM: Round [84] log likelihood: -361715.014368
EM: Round [85] log likelihood: -361715.011587
EM: Round [86] log likelihood: -361715.008904
EM: Round [87] log likelihood: -361715.006316
EM: Round [88] log likelihood: -361715.003820
EM: Round [89] log likelihood: -361715.001412
EM: Round [90] log likelihood: -361714.999088
EM: Round [91] log likelihood: -361714.996846
EM: Round [92] log likelihood: -361714.994683
EM: Round [93] log likelihood: -361714.992596
EM: Round [94] log likelihood: -361714.990581
EM: Round [95] log likelihood: -361714.988638
EM: Round [96] log likelihood: -361714.986762
EM: Round [97] log likelihood: -361714.984952
EM: Round [98] log likelihood: -361714.983206
EM: Round [99] log likelihood: -361714.981520
EM: Round [100] log likelihood: -361714.979893
EM: Round [101] log likelihood: -361714.978323
EM: Round [102] log likelihood: -361714.976807
EM: Round [103] log likelihood: -361714.975344
EM: Round [104] log likelihood: -361714.973933
EM: Round [105] log likelihood: -361714.972570
EM: Round [106] log likelihood: -361714.971254
EM: Round [107] log likelihood: -361714.969985
EM: Round [108] log likelihood: -361714.968759
EM: Round [109] log likelihood: -361714.967576
EM: Round [110] log likelihood: -361714.966434
EM: Round [111] log likelihood: -361714.965332
EM: Round [112] log likelihood: -361714.964268
EM: Round [113] log likelihood: -361714.963241
EM: Round [114] log likelihood: -361714.962250
EM: Round [115] log likelihood: -361714.961292
EM: Round [116] log likelihood: -361714.960368
EM: Round [117] log likelihood: -361714.959477
EM: Round [118] log likelihood: -361714.958616
EM: Round [119] log likelihood: -361714.957784
EM: Round [120] log likelihood: -361714.956982
EM: Round [121] log likelihood: -361714.956207
EM: Round [122] log likelihood: -361714.955460
EM: Round [123] log likelihood: -361714.954738
EM: Round [124] log likelihood: -361714.954041
EM: Round [125] log likelihood: -361714.953368
EM: Round [126] log likelihood: -361714.952719
EM: Round [127] log likelihood: -361714.952092
EM: Round [128] log likelihood: -361714.951486
EM: Round [129] log likelihood: -361714.950902
EM: Round [130] log likelihood: -361714.950338
EM: Round [131] log likelihood: -361714.949794
EM: Round [132] log likelihood: -361714.949268
EM: Round [133] log likelihood: -361714.948760
EM: Round [134] log likelihood: -361714.948270
EM: Round [135] log likelihood: -361714.947798
EM: Round [136] log likelihood: -361714.947341
EM: Round [137] log likelihood: -361714.946900
EM: Round [138] log likelihood: -361714.946475
EM: Round [139] log likelihood: -361714.946064
EM: Round [140] log likelihood: -361714.945667
EM: Round [141] log likelihood: -361714.945285
EM: Round [142] log likelihood: -361714.944915
EM: Round [143] log likelihood: -361714.944558
EM: Round [144] log likelihood: -361714.944214
EM: Round [145] log likelihood: -361714.943881
EM: Round [146] log likelihood: -361714.943561
EM: Round [147] log likelihood: -361714.943251
EM: Round [148] log likelihood: -361714.942952
EM: Round [149] log likelihood: -361714.942663
EM: Round [150] log likelihood: -361714.942384
EM: Round [151] log likelihood: -361714.942115
EM: Round [152] log likelihood: -361714.941856
EM: Round [153] log likelihood: -361714.941605
EM: Round [154] log likelihood: -361714.941363
EM: Round [155] log likelihood: -361714.941129
EM: Round [156] log likelihood: -361714.940904
EM: Round [157] log likelihood: -361714.940686
EM: Round [158] log likelihood: -361714.940476
EM: Round [159] log likelihood: -361714.940273
EM: Round [160] log likelihood: -361714.940077
EM: Round [161] log likelihood: -361714.939888
EM: Round [162] log likelihood: -361714.939706
EM: Round [163] log likelihood: -361714.939529
EM: Round [164] log likelihood: -361714.939359
EM: Round [165] log likelihood: -361714.939195
EM: Round [166] log likelihood: -361714.939037
EM: Round [167] log likelihood: -361714.938884
EM: Round [168] log likelihood: -361714.938736
EM: Round [169] log likelihood: -361714.938594
EM: Round [170] log likelihood: -361714.938456
EM: Round [171] log likelihood: -361714.938324
EM: Round [172] log likelihood: -361714.938195
EM: Round [173] log likelihood: -361714.938072
EM: Round [174] log likelihood: -361714.937952
EM: Round [175] log likelihood: -361714.937837
EM: Round [176] log likelihood: -361714.937726
EM: Round [177] log likelihood: -361714.937618
EM: Round [178] log likelihood: -361714.937515
EM: Round [179] log likelihood: -361714.937415
EM: Round [180] log likelihood: -361714.937318
EM: Stopping iterations at round 180 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.T7iQ8L1Rvu/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.T7iQ8L1Rvu/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.T7iQ8L1Rvu/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 136418894 > /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.T7iQ8L1Rvu/ctat_genome_lib_build_dir > /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.T7iQ8L1Rvu/ctat_genome_lib_build_dir --annotate /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.T7iQ8L1Rvu/ctat_genome_lib_build_dir
-done, see /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.T7iQ8L1Rvu/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 2515, filtered: 11852)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.T7iQ8L1Rvu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.T7iQ8L1Rvu/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000215790.8]
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WARNING, no entry stored in dbm for [ENSG00000228823.1]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000224729.6]
WARNING, no entry stored in dbm for [ENSG00000225856.2]
WARNING, no entry stored in dbm for [ENSG00000225510.2]
WARNING, no entry stored in dbm for [ENSG00000274605.2]
WARNING, no entry stored in dbm for [ENSG00000257894.2]
WARNING, no entry stored in dbm for [ENSG00000233997.5]
WARNING, no entry stored in dbm for [ENSG00000249740.3]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000223705.9]
WARNING, no entry stored in dbm for [ENSG00000253396.1]
WARNING, no entry stored in dbm for [ENSG00000214807.2]
WARNING, no entry stored in dbm for [ENSG00000259161.2]
WARNING, no entry stored in dbm for [ENSG00000232634.1]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000239213.6]
WARNING, no entry stored in dbm for [ENSG00000198496.12]
WARNING, no entry stored in dbm for [ENSG00000234948.2]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000287291.1]
WARNING, no entry stored in dbm for [ENSG00000254701.3]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000248866.1]
WARNING, no entry stored in dbm for [ENSG00000254317.1]
WARNING, no entry stored in dbm for [ENSG00000219682.4]
WARNING, no entry stored in dbm for [ENSG00000241529.3]
WARNING, no entry stored in dbm for [ENSG00000274628.5]
WARNING, no entry stored in dbm for [ENSG00000280739.3]
WARNING, no entry stored in dbm for [ENSG00000232905.2]
WARNING, no entry stored in dbm for [ENSG00000273328.5]
WARNING, no entry stored in dbm for [ENSG00000197182.14]
WARNING, no entry stored in dbm for [ENSG00000197182.14]
WARNING, no entry stored in dbm for [ENSG00000269929.3]
WARNING, no entry stored in dbm for [ENSG00000269929.3]
WARNING, no entry stored in dbm for [ENSG00000203709.12]
WARNING, no entry stored in dbm for [ENSG00000272690.6]
WARNING, no entry stored in dbm for [ENSG00000229641.1]
WARNING, no entry stored in dbm for [ENSG00000253642.6]
WARNING, no entry stored in dbm for [ENSG00000272601.1]
WARNING, no entry stored in dbm for [ENSG00000235280.2]
WARNING, no entry stored in dbm for [ENSG00000250135.1]
WARNING, no entry stored in dbm for [ENSG00000205918.9]
WARNING, no entry stored in dbm for [ENSG00000231312.7]
WARNING, no entry stored in dbm for [ENSG00000261722.1]
WARNING, no entry stored in dbm for [ENSG00000261722.1]
WARNING, no entry stored in dbm for [ENSG00000232947.1]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000263327.6]
WARNING, no entry stored in dbm for [ENSG00000238122.1]
WARNING, no entry stored in dbm for [ENSG00000100068.14]
WARNING, no entry stored in dbm for [ENSG00000232825.3]
WARNING, no entry stored in dbm for [ENSG00000245937.8]
WARNING, no entry stored in dbm for [ENSG00000260259.1]
WARNING, no entry stored in dbm for [ENSG00000088340.17]
WARNING, no entry stored in dbm for [ENSG00000251323.3]
WARNING, no entry stored in dbm for [ENSG00000285737.1]
WARNING, no entry stored in dbm for [ENSG00000241288.8]
WARNING, no entry stored in dbm for [ENSG00000235269.2]
WARNING, no entry stored in dbm for [ENSG00000249203.2]
WARNING, no entry stored in dbm for [ENSG00000204650.14]
WARNING, no entry stored in dbm for [ENSG00000262097.2]
WARNING, no entry stored in dbm for [ENSG00000248489.2]
WARNING, no entry stored in dbm for [ENSG00000262188.2]
WARNING, no entry stored in dbm for [ENSG00000226125.2]
WARNING, no entry stored in dbm for [ENSG00000218357.3]
WARNING, no entry stored in dbm for [ENSG00000236882.8]
WARNING, no entry stored in dbm for [ENSG00000228918.4]
WARNING, no entry stored in dbm for [ENSG00000234722.5]
WARNING, no entry stored in dbm for [ENSG00000269416.6]
WARNING, no entry stored in dbm for [ENSG00000281404.2]
WARNING, no entry stored in dbm for [ENSG00000224559.2]
WARNING, no entry stored in dbm for [ENSG00000229723.1]
WARNING, no entry stored in dbm for [ENSG00000248118.2]
WARNING, no entry stored in dbm for [ENSG00000231711.2]
WARNING, no entry stored in dbm for [ENSG00000280809.4]
WARNING, no entry stored in dbm for [ENSG00000224625.2]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000233237.8]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000224520.2]
WARNING, no entry stored in dbm for [ENSG00000258948.2]
WARNING, no entry stored in dbm for [ENSG00000229124.7]
WARNING, no entry stored in dbm for [ENSG00000234889.2]
WARNING, no entry stored in dbm for [ENSG00000288694.1]
WARNING, no entry stored in dbm for [ENSG00000271026.1]
WARNING, no entry stored in dbm for [ENSG00000250878.3]
WARNING, no entry stored in dbm for [ENSG00000224936.1]
WARNING, no entry stored in dbm for [ENSG00000232133.1]
WARNING, no entry stored in dbm for [ENSG00000226777.7]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000226268.3]
WARNING, no entry stored in dbm for [ENSG00000285748.2]
WARNING, no entry stored in dbm for [ENSG00000239345.2]
WARNING, no entry stored in dbm for [ENSG00000243188.1]
WARNING, no entry stored in dbm for [ENSG00000205412.5]
WARNING, no entry stored in dbm for [ENSG00000253774.1]
WARNING, no entry stored in dbm for [ENSG00000237646.1]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000283001.2]
WARNING, no entry stored in dbm for [ENSG00000228022.6]
WARNING, no entry stored in dbm for [ENSG00000223383.1]
WARNING, no entry stored in dbm for [ENSG00000225077.3]
WARNING, no entry stored in dbm for [ENSG00000213943.3]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000260276.2]
WARNING, no entry stored in dbm for [ENSG00000185390.2]
WARNING, no entry stored in dbm for [ENSG00000249519.1]
WARNING, no entry stored in dbm for [ENSG00000225855.7]
WARNING, no entry stored in dbm for [ENSG00000260276.2]
WARNING, no entry stored in dbm for [ENSG00000271795.1]
WARNING, no entry stored in dbm for [ENSG00000244097.1]
WARNING, no entry stored in dbm for [ENSG00000226031.5]
WARNING, no entry stored in dbm for [ENSG00000234899.11]
WARNING, no entry stored in dbm for [ENSG00000205890.3]
WARNING, no entry stored in dbm for [ENSG00000287837.1]
WARNING, no entry stored in dbm for [ENSG00000233064.2]
WARNING, no entry stored in dbm for [ENSG00000215374.6]
WARNING, no entry stored in dbm for [ENSG00000231527.7]
WARNING, no entry stored in dbm for [ENSG00000196312.15]
WARNING, no entry stored in dbm for [ENSG00000181355.21]
WARNING, no entry stored in dbm for [ENSG00000283023.1]
WARNING, no entry stored in dbm for [ENSG00000198221.10]
WARNING, no entry stored in dbm for [ENSG00000286792.1]
WARNING, no entry stored in dbm for [ENSG00000264044.1]
WARNING, no entry stored in dbm for [ENSG00000213399.3]
WARNING, no entry stored in dbm for [ENSG00000175749.11]
WARNING, no entry stored in dbm for [ENSG00000250442.1]
WARNING, no entry stored in dbm for [ENSG00000272589.1]
WARNING, no entry stored in dbm for [ENSG00000223704.2]
WARNING, no entry stored in dbm for [ENSG00000241671.1]
WARNING, no entry stored in dbm for [ENSG00000243701.7]
WARNING, no entry stored in dbm for [ENSG00000186704.9]
WARNING, no entry stored in dbm for [ENSG00000245750.10]
WARNING, no entry stored in dbm for [ENSG00000250768.1]
WARNING, no entry stored in dbm for [ENSG00000267106.8]
WARNING, no entry stored in dbm for [ENSG00000286401.1]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000280434.1]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000231722.1]
WARNING, no entry stored in dbm for [ENSG00000227496.3]
WARNING, no entry stored in dbm for [ENSG00000255100.1]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000276710.4]
WARNING, no entry stored in dbm for [ENSG00000242193.11]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000188388.10]
WARNING, no entry stored in dbm for [ENSG00000283982.1]
WARNING, no entry stored in dbm for [ENSG00000288657.1]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000196167.10]
WARNING, no entry stored in dbm for [ENSG00000230324.1]
WARNING, no entry stored in dbm for [ENSG00000228414.7]
WARNING, no entry stored in dbm for [ENSG00000100181.22]
WARNING, no entry stored in dbm for [ENSG00000260896.6]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000227832.1]
WARNING, no entry stored in dbm for [ENSG00000285051.2]
WARNING, no entry stored in dbm for [ENSG00000259755.1]
WARNING, no entry stored in dbm for [ENSG00000259755.1]
WARNING, no entry stored in dbm for [ENSG00000255836.1]
WARNING, no entry stored in dbm for [ENSG00000244161.1]
WARNING, no entry stored in dbm for [ENSG00000269954.2]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000241073.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000250251.6]
WARNING, no entry stored in dbm for [ENSG00000259669.6]
WARNING, no entry stored in dbm for [ENSG00000242609.1]
WARNING, no entry stored in dbm for [ENSG00000287550.1]
WARNING, no entry stored in dbm for [ENSG00000256582.1]
WARNING, no entry stored in dbm for [ENSG00000236830.7]
WARNING, no entry stored in dbm for [ENSG00000236830.7]
WARNING, no entry stored in dbm for [ENSG00000236830.7]
WARNING, no entry stored in dbm for [ENSG00000236830.7]
WARNING, no entry stored in dbm for [ENSG00000236830.7]
WARNING, no entry stored in dbm for [ENSG00000236830.7]
WARNING, no entry stored in dbm for [ENSG00000236830.7]
WARNING, no entry stored in dbm for [ENSG00000276710.4]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000249917.3]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000224750.6]
WARNING, no entry stored in dbm for [ENSG00000230131.6]
WARNING, no entry stored in dbm for [ENSG00000124549.14]
WARNING, no entry stored in dbm for [ENSG00000213736.2]
WARNING, no entry stored in dbm for [ENSG00000224817.2]
WARNING, no entry stored in dbm for [ENSG00000287559.1]
WARNING, no entry stored in dbm for [ENSG00000250966.2]
WARNING, no entry stored in dbm for [ENSG00000279022.1]
WARNING, no entry stored in dbm for [ENSG00000154874.15]
WARNING, no entry stored in dbm for [ENSG00000226137.5]
WARNING, no entry stored in dbm for [ENSG00000272405.1]
WARNING, no entry stored in dbm for [ENSG00000225603.3]
WARNING, no entry stored in dbm for [ENSG00000277654.6]
WARNING, no entry stored in dbm for [ENSG00000236017.8]
WARNING, no entry stored in dbm for [ENSG00000232546.1]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000258885.1]
WARNING, no entry stored in dbm for [ENSG00000231329.8]
WARNING, no entry stored in dbm for [ENSG00000219807.2]
WARNING, no entry stored in dbm for [ENSG00000258133.1]
WARNING, no entry stored in dbm for [ENSG00000267249.1]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000254990.5]
WARNING, no entry stored in dbm for [ENSG00000272948.2]
WARNING, no entry stored in dbm for [ENSG00000272948.2]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000267108.1]
WARNING, no entry stored in dbm for [ENSG00000267108.1]
WARNING, no entry stored in dbm for [ENSG00000266954.1]
WARNING, no entry stored in dbm for [ENSG00000246889.2]
WARNING, no entry stored in dbm for [ENSG00000237276.8]
WARNING, no entry stored in dbm for [ENSG00000241231.2]
WARNING, no entry stored in dbm for [ENSG00000231533.2]
WARNING, no entry stored in dbm for [ENSG00000287040.1]
WARNING, no entry stored in dbm for [ENSG00000271581.1]
WARNING, no entry stored in dbm for [ENSG00000232576.2]
WARNING, no entry stored in dbm for [ENSG00000238287.1]
WARNING, no entry stored in dbm for [ENSG00000270780.1]
WARNING, no entry stored in dbm for [ENSG00000284999.1]
WARNING, no entry stored in dbm for [ENSG00000279625.1]
WARNING, no entry stored in dbm for [ENSG00000232295.7]
WARNING, no entry stored in dbm for [ENSG00000230202.1]
WARNING, no entry stored in dbm for [ENSG00000236777.1]
WARNING, no entry stored in dbm for [ENSG00000287811.1]
WARNING, no entry stored in dbm for [ENSG00000261641.2]
WARNING, no entry stored in dbm for [ENSG00000234062.8]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000214144.3]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000224356.5]
WARNING, no entry stored in dbm for [ENSG00000213087.3]
WARNING, no entry stored in dbm for [ENSG00000279096.2]
WARNING, no entry stored in dbm for [ENSG00000227217.1]
WARNING, no entry stored in dbm for [ENSG00000248503.2]
WARNING, no entry stored in dbm for [ENSG00000225339.4]
WARNING, no entry stored in dbm for [ENSG00000246203.2]
WARNING, no entry stored in dbm for [ENSG00000228830.1]
WARNING, no entry stored in dbm for [ENSG00000228830.1]
WARNING, no entry stored in dbm for [ENSG00000279678.1]
WARNING, no entry stored in dbm for [ENSG00000279286.2]
WARNING, no entry stored in dbm for [ENSG00000259977.1]
WARNING, no entry stored in dbm for [ENSG00000286803.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000271913.7]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000232599.1]
WARNING, no entry stored in dbm for [ENSG00000178803.12]
WARNING, no entry stored in dbm for [ENSG00000235954.7]
WARNING, no entry stored in dbm for [ENSG00000161912.18]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000237356.7]
WARNING, no entry stored in dbm for [ENSG00000279047.4]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000286543.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000267305.2]
WARNING, no entry stored in dbm for [ENSG00000218227.3]
WARNING, no entry stored in dbm for [ENSG00000205632.4]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000285668.1]
WARNING, no entry stored in dbm for [ENSG00000280117.1]
WARNING, no entry stored in dbm for [ENSG00000253535.5]
WARNING, no entry stored in dbm for [ENSG00000243199.1]
WARNING, no entry stored in dbm for [ENSG00000240611.1]
WARNING, no entry stored in dbm for [ENSG00000248240.1]
WARNING, no entry stored in dbm for [ENSG00000248240.1]
WARNING, no entry stored in dbm for [ENSG00000235421.1]
WARNING, no entry stored in dbm for [ENSG00000279147.1]
WARNING, no entry stored in dbm for [ENSG00000231305.4]
WARNING, no entry stored in dbm for [ENSG00000286182.1]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000239572.3]
WARNING, no entry stored in dbm for [ENSG00000288075.1]
WARNING, no entry stored in dbm for [ENSG00000288075.1]
WARNING, no entry stored in dbm for [ENSG00000259867.6]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000286161.1]
WARNING, no entry stored in dbm for [ENSG00000282375.1]
WARNING, no entry stored in dbm for [ENSG00000242396.1]
WARNING, no entry stored in dbm for [ENSG00000260352.1]
WARNING, no entry stored in dbm for [ENSG00000226291.1]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000286662.2]
WARNING, no entry stored in dbm for [ENSG00000240207.7]
WARNING, no entry stored in dbm for [ENSG00000286069.2]
WARNING, no entry stored in dbm for [ENSG00000234072.1]
WARNING, no entry stored in dbm for [ENSG00000230936.1]
WARNING, no entry stored in dbm for [ENSG00000198580.7]
WARNING, no entry stored in dbm for [ENSG00000287388.1]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000254951.7]
WARNING, no entry stored in dbm for [ENSG00000254951.7]
WARNING, no entry stored in dbm for [ENSG00000285792.1]
WARNING, no entry stored in dbm for [ENSG00000259945.1]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000257035.1]
WARNING, no entry stored in dbm for [ENSG00000255621.1]
WARNING, no entry stored in dbm for [ENSG00000285600.1]
WARNING, no entry stored in dbm for [ENSG00000222031.1]
WARNING, no entry stored in dbm for [ENSG00000280161.1]
WARNING, no entry stored in dbm for [ENSG00000272267.2]
WARNING, no entry stored in dbm for [ENSG00000240418.1]
WARNING, no entry stored in dbm for [ENSG00000235978.6]
WARNING, no entry stored in dbm for [ENSG00000235978.6]
WARNING, no entry stored in dbm for [ENSG00000233862.7]
WARNING, no entry stored in dbm for [ENSG00000261329.6]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000262833.1]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000245958.6]
WARNING, no entry stored in dbm for [ENSG00000242162.1]
WARNING, no entry stored in dbm for [ENSG00000186148.13]
WARNING, no entry stored in dbm for [ENSG00000274499.1]
WARNING, no entry stored in dbm for [ENSG00000258193.1]
WARNING, no entry stored in dbm for [ENSG00000254363.6]
WARNING, no entry stored in dbm for [ENSG00000250494.1]
WARNING, no entry stored in dbm for [ENSG00000216895.9]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000260905.1]
WARNING, no entry stored in dbm for [ENSG00000249042.6]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000287859.1]
WARNING, no entry stored in dbm for [ENSG00000244161.1]
WARNING, no entry stored in dbm for [ENSG00000274525.1]
WARNING, no entry stored in dbm for [ENSG00000230092.7]
WARNING, no entry stored in dbm for [ENSG00000287454.1]
WARNING, no entry stored in dbm for [ENSG00000273015.2]
WARNING, no entry stored in dbm for [ENSG00000259124.1]
WARNING, no entry stored in dbm for [ENSG00000280189.1]
WARNING, no entry stored in dbm for [ENSG00000286739.1]
WARNING, no entry stored in dbm for [ENSG00000227946.1]
WARNING, no entry stored in dbm for [ENSG00000261770.1]
WARNING, no entry stored in dbm for [ENSG00000263345.1]
WARNING, no entry stored in dbm for [ENSG00000236531.2]
WARNING, no entry stored in dbm for [ENSG00000227081.5]
WARNING, no entry stored in dbm for [ENSG00000268189.2]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000243554.1]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000248618.1]
WARNING, no entry stored in dbm for [ENSG00000244560.7]
WARNING, no entry stored in dbm for [ENSG00000282943.1]
WARNING, no entry stored in dbm for [ENSG00000214870.9]
WARNING, no entry stored in dbm for [ENSG00000214870.9]
WARNING, no entry stored in dbm for [ENSG00000268163.1]
WARNING, no entry stored in dbm for [ENSG00000269504.3]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000231419.6]
WARNING, no entry stored in dbm for [ENSG00000232748.3]
WARNING, no entry stored in dbm for [ENSG00000240602.7]
WARNING, no entry stored in dbm for [ENSG00000268895.6]
WARNING, no entry stored in dbm for [ENSG00000249859.12]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]


	* STAR-Fusion complete.  See output: /tmp/nxf.T7iQ8L1Rvu/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)