Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/b854b9adfb58c36cae44733ad45cb8/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e1/7fe02f6f76ff913be96f9c6c863678/tih_rna_sample_00598_B23MVV7LT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/b854b9adfb58c36cae44733ad45cb8/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/eb/e7de1e95bc9cf87f555cc2ff404876/tih_rna_sample_00598_B23MVV7LT4_1.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: tih_rna_sample_00598_B23MVV7LT4_1/abundance.h5
Successfully converted tih_rna_sample_00598_B23MVV7LT4_1/abundance.h5 to tih_rna_sample_00598_B23MVV7LT4_1_kallisto_mqc.tsv
  Sample: tih_rna_sample_00598_B23MVV7LT4_1
  Mean Fragment Length: 125.5 bp
  Median Fragment Length: 118.0 bp
  pct_mito_est_counts: 0.007%
  pct_ribo_est_counts: 0.875%
  pct_hk_est_counts: 0.279%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.015%
  pct_ribo_tpm: 2.748%
  pct_hk_tpm: 0.463%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.028%