Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/92/f400a8399f5430f8a9676b30f9d8f2/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/92/f400a8399f5430f8a9676b30f9d8f2/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/428090b0f171fa0f135969444f4a49/FFPE_V4_0002_RNA_0001_B23MVV7LT4_1_R2.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/428090b0f171fa0f135969444f4a49/FFPE_V4_0002_RNA_0001_B23MVV7LT4_1_R1.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory