File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/ed34587610d3b8e0a66d9ced0c00ef/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/e0e44f7e2b8d4f55785e43a0d422b7/tih_rna_sample_00569_B23MVV7LT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/ed34587610d3b8e0a66d9ced0c00ef/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/3a51fd8e2f80a43c171da758253373/tih_rna_sample_00569_B23MVV7LT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/ed34587610d3b8e0a66d9ced0c00ef/.command.run
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: tih_rna_sample_00569_B23MVV7LT4_1/abundance.h5
Successfully converted tih_rna_sample_00569_B23MVV7LT4_1/abundance.h5 to tih_rna_sample_00569_B23MVV7LT4_1_kallisto_mqc.tsv
  Sample: tih_rna_sample_00569_B23MVV7LT4_1
  Mean Fragment Length: 141.2 bp
  Median Fragment Length: 129.0 bp
  pct_mito_est_counts: 0.006%
  pct_ribo_est_counts: 0.966%
  pct_hk_est_counts: 0.569%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.012%
  pct_ribo_tpm: 2.896%
  pct_hk_tpm: 0.843%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 4.902%