File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6d/7385a16823ff9ee102b8c2fdf1a250/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:27:17
                             Started mapping on |	Jun 08 10:33:56
                                    Finished on |	Jun 08 11:56:40
       Mapping speed, Million of reads per hour |	214.71

                          Number of input reads |	296056639
                      Average input read length |	264
                                    UNIQUE READS:
                   Uniquely mapped reads number |	281694895
                        Uniquely mapped reads % |	95.15%
                          Average mapped length |	263.53
                       Number of splices: Total |	339304753
            Number of splices: Annotated (sjdb) |	334445579
                       Number of splices: GT/AG |	335836525
                       Number of splices: GC/AG |	1916158
                       Number of splices: AT/AC |	188984
               Number of splices: Non-canonical |	1363086
                      Mismatch rate per base, % |	0.25%
                         Deletion rate per base |	0.02%
                        Deletion average length |	1.90
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.70
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	10808883
             % of reads mapped to multiple loci |	3.65%
        Number of reads mapped to too many loci |	487260
             % of reads mapped to too many loci |	0.16%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2690155
                 % of reads unmapped: too short |	0.91%
                Number of reads unmapped: other |	375446
                     % of reads unmapped: other |	0.13%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%